# terms

id: GO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue development","synonyms":[{"name":"atrial myocardium development","type":"exact"}],"termid":"GO:0003228"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["RHEA:17257","EC:1.14.14.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.75-RXN","KEGG_REACTION:R05877"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: SO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of sequences (often chromosomes) of an individual.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_genome","synonyms":[{"name":"variant genome","type":"related"}],"termid":"SO:0001506"}


id: PBO:0060236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene like 1","termid":"PBO:0060236"}


id: FYPO:0006476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the onset of anaphase of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased duration of mitotic M phase","termid":"FYPO:0006490"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"premature mitotic metaphase/anaphase transition","synonyms":[{"name":"advanced mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"decreased duration of metaphase during mitosis","type":"related"},{"name":"decreased duration of mitotic metaphase","type":"related"},{"name":"premature cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"premature cell cycle progression through mitotic metaphase/anaphase transition","type":"exact"},{"name":"premature metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"premature mitotic metaphase/anaphase phase transition","type":"exact"},{"name":"premature mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"premature onset of mitotic anaphase","type":"exact"}],"termid":"FYPO:0006476"}


id: PBO:0081964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida like domain containing 2, pseudogene","termid":"PBO:0081964"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: PBO:0054766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2178","termid":"PBO:0054766"}


id: GO:0120222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blastocyst development.","definition_xrefs":["PMID:29593216","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blastocyst development","termid":"GO:0120222"}


id: PBO:0053925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1222","termid":"PBO:0053925"}


id: PBO:0054252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1635","termid":"PBO:0054252"}


id: GO:0006007
data:
  {"annotated_genes":["SJAG_00027","SJAG_04495","SJAG_02107","SJAG_00461","SJAG_03903","SJAG_03660","SJAG_02369","SJAG_02945","SJAG_02135","SJAG_04334","SJAG_00605","SJAG_03828","SJAG_04192","SJAG_06622","SJAG_06621","SJAG_00839","SJAG_02009","SJAG_03373","SJAG_01310","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101877,104991,105462,105463,112401,99465,104990,104996,104992,101512,105460,99723,101510,101511,104995,91115,101876,105459,104993,105457,105461,90625,94365,94094,100533,104994,105458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose breakdown","type":"exact"},{"name":"glucose catabolism","type":"exact"},{"name":"glucose degradation","type":"exact"}],"termid":"GO:0006007","terms_by_termid":{"GO:0061621":null}}


id: PATO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001058 absolute acceleration (obsolete PATO:0001058)","termid":"PATO:0001058"}


id: GO:1905623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leaf development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"positively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leaf development","synonyms":[{"name":"activation of leaf development","type":"narrow"},{"name":"up regulation of leaf development","type":"exact"},{"name":"up-regulation of leaf development","type":"exact"},{"name":"upregulation of leaf development","type":"exact"}],"termid":"GO:1905623"}


id: GO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of osteoclast differentiation","termid":"GO:0045670"},{"relation_name":"positively_regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast differentiation","synonyms":[{"name":"activation of osteoclast differentiation","type":"narrow"},{"name":"stimulation of osteoclast differentiation","type":"narrow"},{"name":"up regulation of osteoclast differentiation","type":"exact"},{"name":"up-regulation of osteoclast differentiation","type":"exact"},{"name":"upregulation of osteoclast differentiation","type":"exact"}],"termid":"GO:0045672"}


id: PBO:0043675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1C","termid":"PBO:0043675"}


id: GO:0052162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation by symbiont of defense-related host calcium ion flux","secondary_identifiers":["GO:0052301"],"synonyms":[{"name":"modulation by organism of defense-related calcium ion flux in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host Ca2+ flux","type":"exact"}],"termid":"GO:0052162"}


id: PBO:0108614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 15","termid":"PBO:0108614"}


id: GO:0009419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pointed extremity furthest from the cell of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus tip","synonyms":[{"name":"fimbrial tip","type":"exact"}],"termid":"GO:0009419"}


id: PBO:0084540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication","termid":"PBO:0084540"}


id: GO:0102879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-thujopsene + diphosphoric acid.","definition_xrefs":["RHEA:30375","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-thujopsene synthase activity","secondary_identifiers":["MetaCyc:RXN-8418","EC:4.2.3.79"],"termid":"GO:0102879"}


id: GO:0021840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that control the direction of migration of interneurons as a component of the process of migration from the subpallium to the cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","PMID:12626695","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}


id: PATO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates whether the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial mating type","termid":"PATO:0001335"}


id: FYPO:0006674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished during conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during mating","synonyms":[{"name":"abolished protein localisation to nucleus during mating","type":"exact"},{"name":"abolished protein localization to nucleus during conjugation","type":"exact"},{"name":"nuclear exclusion during mating","type":"related"},{"name":"nuclear protein exclusion during mating","type":"related"},{"name":"protein localization to nucleus abolished during mating","type":"exact"}],"termid":"FYPO:0006674"}


id: PBO:0061109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 2","termid":"PBO:0061109"}


id: PBO:0071720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 18","termid":"PBO:0071720"}


id: FYPO:0005243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on glutamine nitrogen source","synonyms":[{"name":"increased growth on glutamine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0005243"}


id: PBO:0053344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 222","termid":"PBO:0053344"}


id: GO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The precipitation of calcium carbonate onto the organic matrix of a shell, such as a mollusc shell.","definition_xrefs":["GOC:mah","PMID:15132736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shell calcification","termid":"GO:0031215"}


id: PATO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of the bearer's angular movement about an axis; the angle rotated in a given time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Angular_velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"velocity","termid":"PATO:0002242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angular velocity","termid":"PATO:0001413"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: PBO:0054816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2229","termid":"PBO:0054816"}


id: PBO:0080840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 4","termid":"PBO:0080840"}


id: GO:0060965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the rate, frequency, or extent of gene silencing by a microRNA (miRNA).","definition_xrefs":["GOC:aruk","GOC:bc","GOC:dph","GOC:tb","PMID:23985560","PMID:28379604","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA-mediated gene silencing","termid":"GO:0060964"},{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900369"},{"relation_name":"negatively_regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA-mediated gene silencing","synonyms":[{"name":"negative regulation of gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060965"}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: PBO:0029689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0029689"}


id: PBO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Spc24","termid":"PBO:0004189"}


id: GO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045891)","synonyms":[{"name":"negative regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045891"}


id: GO:0008824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanate + H2O = carbamate.","definition_xrefs":["RHEA:11120","EC:4.2.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyanate hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0608","MetaCyc:R524-RXN"],"synonyms":[{"name":"carbamate hydro-lyase activity","type":"related"},{"name":"cyanase activity","type":"exact"},{"name":"cyanate C-N-lyase activity","type":"related"},{"name":"cyanate aminohydrolase activity","type":"related"},{"name":"cyanate hydrolase activity","type":"related"},{"name":"cyanate lyase activity","type":"exact"}],"termid":"GO:0008824"}


id: GO:0098789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The targeted, endonucleolytic cleavage of a pre-mRNA, required for polyadenylation of the 3' end. This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.","gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage required for polyadenylation (obsolete GO:0098789)","synonyms":[{"name":"cleavage and polyadenylylation specificity factor activity","type":"related"},{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0098789"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["PMID:7729583","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: GO:1904112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:25717181","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of plus-end directed microfilament motor activity (obsolete GO:1904112)","synonyms":[{"name":"activation of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed actin filament motor activity","type":"related"},{"name":"activation of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"activation of plus-end directed microfilament motor activity","type":"narrow"},{"name":"positive regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"positive regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"positive regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"up-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"up-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"up-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"upregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"upregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"upregulation of plus-end directed microfilament motor activity","type":"exact"}],"termid":"GO:1904112"}


id: GO:0150013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["PMID:17114044","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of neuron projection arborization","termid":"GO:0150011"},{"relation_name":"negatively_regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection arborization","synonyms":[{"name":"negative regulation of neurite arborization","type":"exact"},{"name":"negative regulation of neurite branching","type":"exact"},{"name":"negative regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150013"}


id: PBO:0059299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L48","termid":"PBO:0059299"}


id: PR:Q09819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cph1 gene.","definition_xrefs":["UniProtKB:Q09819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.05","synonyms":[{"name":"Spom972h-cph1","type":"exact"}],"termid":"PR:Q09819"}


id: PR:000044611
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septation initiation protein sid4 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Thr-275 and Ser-278 of the amino acid sequence represented by UniProtKB:O60187. Example: UniProtKB:O60187, Thr-275, MOD:00047|Ser-278, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:24055157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septation initiation protein sid4 (Schizosaccharomyces pombe)","termid":"PR:000044588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sid4/Phos(T275,S278)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"PomBase_original_PRO_term_name: septation initiation protein sid4 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-sid4/Phos:1","type":"exact"},{"name":"UniProtKB:O60187, Thr-275, MOD:00047|Ser-278, MOD:00046","type":"narrow"},{"name":"sid4/Phos(T275,S278)","type":"exact"}],"termid":"PR:000044611"}


id: PBO:0051654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 9","termid":"PBO:0051654"}


id: PBO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F2","termid":"PBO:0047793"}


id: PBO:0057088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 184","termid":"PBO:0057088"}


id: GO:0102446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"rhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13932"],"termid":"GO:0102446"}


id: GO:2000511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of granzyme A production","termid":"GO:2000511"}


id: PBO:0040153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 2","termid":"PBO:0040153"}


id: PBO:0027803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM216","termid":"PBO:0027803"}


id: GO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a cell is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"localization of cell","synonyms":[{"name":"cell localization","type":"exact"},{"name":"establishment and maintenance of cell localization","type":"exact"},{"name":"establishment and maintenance of localization of cell","type":"exact"},{"name":"localisation of cell","type":"exact"}],"termid":"GO:0051674"}


id: PBO:0074267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 2","termid":"PBO:0074267"}


id: GO:0004806
data:
  {"annotated_genes":["SJAG_01036","SJAG_02487","SJAG_02907","SJAG_02100","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86246,88000,90027,90141,110845],"is_not":false,"summary":null,"term":"GO:0004806"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.","definition_xrefs":["EC:3.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"triglyceride lipase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482777","MetaCyc:TRIACYLGLYCEROL-LIPASE-RXN","Reactome:R-HSA-163551","Reactome:R-HSA-5694109","Reactome:R-HSA-8848339","Reactome:R-HSA-8848338","RHEA:12044"],"synonyms":[{"name":"GA 56","type":"related"},{"name":"GEH","type":"related"},{"name":"PPL","type":"related"},{"name":"TAG activity","type":"exact"},{"name":"amano AP","type":"related"},{"name":"amano B","type":"related"},{"name":"amano CE","type":"related"},{"name":"amano CES","type":"related"},{"name":"amano P","type":"related"},{"name":"amno N-AP","type":"related"},{"name":"butyrinase activity","type":"related"},{"name":"cacordase activity","type":"related"},{"name":"capalase L","type":"related"},{"name":"glycerol ester hydrolase activity","type":"related"},{"name":"glycerol-ester hydrolase activity","type":"related"},{"name":"heparin releasable hepatic lipase","type":"narrow"},{"name":"hepatic lipase","type":"narrow"},{"name":"hepatic monoacylglycerol acyltransferase","type":"narrow"},{"name":"lipazin","type":"related"},{"name":"liver lipase","type":"narrow"},{"name":"meito MY 30","type":"related"},{"name":"meito sangyo OF lipase","type":"related"},{"name":"post-heparin plasma protamine-resistant lipase","type":"narrow"},{"name":"salt-resistant post-heparin lipase","type":"narrow"},{"name":"steapsin","type":"related"},{"name":"takedo 1969-4-9","type":"related"},{"name":"triacetinase activity","type":"related"},{"name":"triacylglycerol acylhydrolase activity","type":"related"},{"name":"triacylglycerol ester hydrolase activity","type":"related"},{"name":"triacylglycerol lipase activity","type":"related"},{"name":"tributyrase activity","type":"related"},{"name":"tributyrin esterase activity","type":"related"},{"name":"tributyrinase activity","type":"related"},{"name":"triglyceridase activity","type":"related"},{"name":"triglyceride hydrolase activity","type":"related"},{"name":"triolein hydrolase activity","type":"related"},{"name":"tween hydrolase activity","type":"related"},{"name":"tween-hydrolyzing esterase activity","type":"related"},{"name":"tweenase activity","type":"related"},{"name":"tweenesterase activity","type":"related"}],"termid":"GO:0004806","terms_by_termid":{"GO:0004806":null}}


id: SO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 5 KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5KB_downstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"5KB downstream variant","type":"exact"},{"name":"Seattleseq:downstream-gene","type":"exact"},{"name":"downstream","type":"exact"},{"name":"within 5KB downstream","type":"related"}],"termid":"SO:0001633"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: PBO:0065761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 1","termid":"PBO:0065761"}


id: PR:O94728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.16c","synonyms":[{"name":"Spom972h-SPBC1604.16c","type":"exact"}],"termid":"PR:O94728"}


id: GO:0042142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The strong but reversible binding of a heavy metal ion by a larger molecule such as protein.","definition_xrefs":["GOC:jl","ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal chelation (obsolete GO:0042142)","synonyms":[{"name":"heavy metal chelation","type":"exact"}],"termid":"GO:0042142"}


id: PBO:0065316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40A (pseudogene)","termid":"PBO:0065316"}


id: GO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm.","definition_xrefs":["GOC:cilia","GOC:kmv","PMID:21422230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary transition zone","synonyms":[{"name":"cilial transition zone","type":"exact"},{"name":"cilium transition zone","type":"exact"},{"name":"connecting cilium","type":"related"}],"termid":"GO:0035869"}


id: PBO:0079159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 18","termid":"PBO:0079159"}


id: GO:1901744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxystreptamine.","definition_xrefs":["UniPathway:UPA00907","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"2-deoxystreptamine metabolic process","termid":"GO:1901742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-deoxystreptamine biosynthetic process","synonyms":[{"name":"2-deoxystreptamine anabolism","type":"exact"},{"name":"2-deoxystreptamine biosynthesis","type":"exact"},{"name":"2-deoxystreptamine formation","type":"exact"},{"name":"2-deoxystreptamine synthesis","type":"exact"}],"termid":"GO:1901744"}


id: GO:0048677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single axon process involved in regeneration of the neuron.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon extension","termid":"GO:0048675"},{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon extension involved in regeneration","termid":"GO:0048677"}


id: PBO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0002378"}


id: PBO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase (predicted)","termid":"PBO:0004262"}


id: PBO:0039114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 2-HS glycoprotein","termid":"PBO:0039114"}


id: GO:0035552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded DNA demethylation (obsolete GO:0035552)","synonyms":[{"name":"oxidative ssDNA demethylation","type":"exact"}],"termid":"GO:0035552"}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: GO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont xylan (obsolete GO:0052420)","termid":"GO:0052420"}


id: FYPO:0002576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal chromatin binding","termid":"FYPO:0002576"}


id: PBO:0079969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 7","termid":"PBO:0079969"}


id: PBO:0071607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 25","termid":"PBO:0071607"}


id: PBO:0089075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf9","termid":"PBO:0089075"}


id: GO:0051254
data:
  {"annotated_genes":["SJAG_00854","SJAG_01771","SJAG_04818","SJAG_03883","SJAG_04153","SJAG_03622","SJAG_04880","SJAG_00285","SJAG_04427","SJAG_03573","SJAG_16457","SJAG_00693","SJAG_02218","SJAG_04099","SJAG_05203","SJAG_02671","SJAG_04647","SJAG_04006","SJAG_00766","SJAG_05187","SJAG_05247","SJAG_04191","SJAG_01436","SJAG_04839","SJAG_00686","SJAG_03126","SJAG_01053","SJAG_02326","SJAG_00641","SJAG_03967","SJAG_00342","SJAG_01818","SJAG_04407","SJAG_02018","SJAG_05313","SJAG_01919","SJAG_03590","SJAG_06599","SJAG_00759","SJAG_02391","SJAG_01040","SJAG_02494","SJAG_05694","SJAG_03289","SJAG_02406","SJAG_05322","SJAG_03745","SJAG_02938","SJAG_02551","SJAG_02415","SJAG_01625","SJAG_04388","SJAG_04084","SJAG_03118","SJAG_00966","SJAG_00266","SJAG_03157","SJAG_01191","SJAG_01213","SJAG_00996","SJAG_01521","SJAG_01150","SJAG_01740","SJAG_03183","SJAG_01113","SJAG_03067","SJAG_06638","SJAG_04206","SJAG_03879","SJAG_05288","SJAG_01243","SJAG_03538","SJAG_03143","SJAG_02810","SJAG_00156","SJAG_00909","SJAG_01910","SJAG_04820","SJAG_04825","SJAG_04092","SJAG_01694","SJAG_00210","SJAG_02383","SJAG_01764","SJAG_00904","SJAG_01149","SJAG_02622","SJAG_03735","SJAG_01952","SJAG_05343","SJAG_01199","SJAG_03346","SJAG_02196","SJAG_05153","SJAG_00163","SJAG_02472","SJAG_02956","SJAG_01441","SJAG_03876","SJAG_04009","SJAG_01916","SJAG_04705","SJAG_02311","SJAG_00973","SJAG_00343","SJAG_02255","SJAG_05341","SJAG_02608","SJAG_02370","SJAG_03241","SJAG_03501","SJAG_01583","SJAG_02239","SJAG_02540","SJAG_04321","SJAG_04813","SJAG_02213","SJAG_04611","SJAG_03519","SJAG_01307","SJAG_02058","SJAG_06576","SJAG_00698","SJAG_02474","SJAG_04712","SJAG_04551","SJAG_04824","SJAG_00391","SJAG_02808","SJAG_02730","SJAG_00802","SJAG_02849","SJAG_04249","SJAG_02252","SJAG_01205","SJAG_05010","SJAG_04350","SJAG_03597","SJAG_00269","SJAG_00164","SJAG_04855","SJAG_01151","SJAG_01062","SJAG_03179","SJAG_04749","SJAG_02723","SJAG_02592","SJAG_03981","SJAG_01944","SJAG_02036","SJAG_04036","SJAG_02773","SJAG_03061","SJAG_01778","SJAG_04421","SJAG_01403","SJAG_03421","SJAG_04682","SJAG_00613","SJAG_01805","SJAG_03484","SJAG_03113","SJAG_02057","SJAG_04755","SJAG_00987","SJAG_00150","SJAG_00297","SJAG_02138"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[87653,105999,102193,108059,105950,109537],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[93349,88348,89168,98159,101313,103520,111933,102522,92018,111487,114304,100469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[111193,101316,95999,94240,114307,89171,94156,100472,85831,92021,107132,109383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[86905,91613,94607,88097,105267,88038,89507,111699,90436,88601,85921,88695,99112,112653,113194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[107980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045893"},{"annotations":[106977,104938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[114423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[74338,88262,72955,106986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[102718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[100968,97082,85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[85597,102720,89596,84120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[111236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[88150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"},{"annotations":[108020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[103030,88151,113033,106634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[67862,60785,96571,113511,85181,90841,104039,68554,104521,64500,91183,113026,104869,94520,105759,110631,102168,108353,84318,91635,111057,112327,100839,112124,83576,93620,83751,89815,67735,93622,98774,101892,105386,61439,106790,109746,62293,91909,88850,93621,89390,107981,110143,113034,114235,90439,69964,100512,107810,90475,92382,105250,84189,95583,75332,98309,93400,106930,114075,115088,98355,105112,65528,99247,84376,93619,104699,113399,105421,86226,87515,98939,95378,112518,106978,103117,94671,107940,109697,98228,110884,115087,89912,93618,103646,104640,96560,62493,91799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[91910,101421,111345,113035,99138,102100,105100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[99497,104813,102426,90551,85842,91485,86806,114935,91966,95112,94768,101747,104786,105101,110780,102101,86497,99759,83613,98036,111346,102294,90440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"positively_regulates","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":168,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00285":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00686":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00759":null,"SJAG_00766":null,"SJAG_00802":null,"SJAG_00854":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00966":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01053":null,"SJAG_01062":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01191":null,"SJAG_01199":null,"SJAG_01205":null,"SJAG_01213":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01441":null,"SJAG_01521":null,"SJAG_01583":null,"SJAG_01625":null,"SJAG_01694":null,"SJAG_01740":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01805":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01916":null,"SJAG_01919":null,"SJAG_01944":null,"SJAG_01952":null,"SJAG_02018":null,"SJAG_02036":null,"SJAG_02057":null,"SJAG_02058":null,"SJAG_02138":null,"SJAG_02196":null,"SJAG_02213":null,"SJAG_02218":null,"SJAG_02239":null,"SJAG_02252":null,"SJAG_02255":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02540":null,"SJAG_02551":null,"SJAG_02592":null,"SJAG_02608":null,"SJAG_02622":null,"SJAG_02671":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02808":null,"SJAG_02810":null,"SJAG_02849":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03113":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03143":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03421":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03597":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03879":null,"SJAG_03883":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04006":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04084":null,"SJAG_04092":null,"SJAG_04099":null,"SJAG_04153":null,"SJAG_04191":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04388":null,"SJAG_04407":null,"SJAG_04421":null,"SJAG_04427":null,"SJAG_04551":null,"SJAG_04611":null,"SJAG_04647":null,"SJAG_04682":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04813":null,"SJAG_04818":null,"SJAG_04820":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05153":null,"SJAG_05187":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05322":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_05694":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA metabolic process","type":"narrow"},{"name":"positive regulation of RNA metabolism","type":"exact"},{"name":"stimulation of RNA metabolic process","type":"narrow"},{"name":"up regulation of RNA metabolic process","type":"exact"},{"name":"up-regulation of RNA metabolic process","type":"exact"},{"name":"upregulation of RNA metabolic process","type":"exact"}],"termid":"GO:0051254","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0032786":null,"GO:0032968":null,"GO:0036450":null,"GO:0045893":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0048026":null,"GO:0060213":null,"GO:0060261":null,"GO:0060963":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1904595":null,"GO:1905746":null,"GO:1990074":null,"GO:2000234":null}}


id: PBO:0066462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 5","termid":"PBO:0066462"}


id: GO:0045667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoblast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoblast differentiation","termid":"GO:0045667"}


id: PBO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8","termid":"PBO:0048010"}


id: PBO:0053619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 661","termid":"PBO:0053619"}


id: PBO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_type_switching","termid":"PBO:0031738"}


id: PBO:0047759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 1 pseudogene 1","termid":"PBO:0047759"}


id: GO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glycine by a cell, in which glycine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"glycine secretion","termid":"GO:0061536"},{"relation_name":"part_of","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"glycine secretion, neurotransmission","termid":"GO:0061537"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: GO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Negative regulation of sister chromatid cohesion by the topological unlinking of a cohesin ring to DNA.","definition_xrefs":["GOC:dph","GOC:vw","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cohesin unloading","synonyms":[{"name":"DNA exit from the cohesin ring","type":"exact"}],"termid":"GO:0061774"}


id: PBO:0046085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 10","termid":"PBO:0046085"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: GO:1901369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic 2,3-bisphospho-D-glyceric acid.","definition_xrefs":["PMID:2226838","GOC:TermGenie","GOC:bf","GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclic 2,3-bisphospho-D-glycerate biosynthetic process","synonyms":[{"name":"cDPG biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid anabolism","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthetic process","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid formation","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid synthesis","type":"exact"},{"name":"cyclic 2,3-diphosphoglycerate biosynthesis","type":"exact"}],"termid":"GO:1901369"}


id: GO:1990666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the serine protease PCSK9 (proprotein convertase subtilisin/kexin-9) and a low-density lipoprotein receptor (LDLR). Interaction typically occurs through the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR, and complex formation promotes degradation of the LDLR through the endosome/lysosome pathway.","definition_xrefs":["PMID:18250299","GOC:BHF","GOC:nc","PMID:24440079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PCSK9-LDLR complex","synonyms":[{"name":"PCSK9.LDLR complex","type":"exact"},{"name":"PCSK9/LDL-R complex","type":"exact"},{"name":"PCSK9:EGF-A complex","type":"related"},{"name":"PCSK9:low-density lipoprotein receptor complex","type":"exact"}],"termid":"GO:1990666"}


id: PBO:0087953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination and ribosome biogenesis factor; ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction","termid":"PBO:0087953"}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: PBO:0027215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_G0_to_G1_transition","termid":"PBO:0027215"}


id: PBO:0085230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of the heteromeric co-chaperone GimC/prefoldin complex; complex promotes efficient protein folding","termid":"PBO:0085230"}


id: PBO:0040495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase A and ninein interacting protein","termid":"PBO:0040495"}


id: FYPO:0007244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during mitotic metaphase","termid":"FYPO:0003002"},{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to kinetochore during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to kinetochore during metaphase during mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to kinetochore during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007244"}


id: PBO:0089969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit, human ASCC1 ortholog","termid":"PBO:0089969"}


id: GO:0110080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["GOC:rph","PMID:27748453","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of placenta blood vessel development","termid":"GO:0110079"},{"relation_name":"positively_regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of placenta blood vessel development","termid":"GO:0110080"}


id: MOD:01594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-113 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01594"}


id: PBO:0031693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization","termid":"PBO:0031693"}


id: PBO:0076831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 2","termid":"PBO:0076831"}


id: GO:0072757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a camptothecin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"response to camptothecin","termid":"GO:1901563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to camptothecin","synonyms":[{"name":"cellular response to CPT","type":"exact"}],"termid":"GO:0072757"}


id: GO:0015820
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_03591","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84250],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[89425,94966,87843],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of L-leucine, 2-amino-4-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-leucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leucine transport","type":"broad"}],"termid":"GO:0015820","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: GO:1903743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","PMID:25329901","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle transport along microtubule","termid":"GO:1901609"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle transport","termid":"GO:1902804"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"negatively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"down regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"down-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"downregulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"inhibition of anterograde synaptic vesicle transport","type":"narrow"}],"termid":"GO:1903743"}


id: FYPO:0007531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is decreased at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","termid":"FYPO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007531"}


id: PBO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor (predicted)","termid":"PBO:0003242"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: GO:0007109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of finishing cell separation, which results in two physically separated cells.","definition_xrefs":["GOC:clt","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis, completion of separation (obsolete GO:0007109)","synonyms":[{"name":"completion of separation involved in cytokinesis","type":"exact"},{"name":"cytokinesis, completion of separation","type":"exact"}],"termid":"GO:0007109"}


id: GO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"down regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through embryonic mitotic cell cycle","type":"narrow"},{"name":"negative regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"negative regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through embryonic mitotic cell cycle","type":"exact"}],"termid":"GO:0045976"}


id: GO:0030437
data:
  {"annotated_genes":["SJAG_03250","SJAG_00993","SJAG_04184","SJAG_02169","SJAG_00663","SJAG_01483","SJAG_02712","SJAG_04868","SJAG_03746","SJAG_02248","SJAG_04080","SJAG_04010","SJAG_00486","SJAG_04470","SJAG_03557","SJAG_00974","SJAG_03483","SJAG_04781","SJAG_04901","SJAG_04271","SJAG_03013","SJAG_04236","SJAG_04922","SJAG_03915","SJAG_02241","SJAG_02736","SJAG_05309","SJAG_04859","SJAG_00114","SJAG_00826","SJAG_04140","SJAG_04275","SJAG_04853","SJAG_01769","SJAG_00405","SJAG_03536","SJAG_01531","SJAG_04238","SJAG_03057","SJAG_02320","SJAG_03688","SJAG_04615","SJAG_04483","SJAG_00821","SJAG_03090","SJAG_01662","SJAG_03587","SJAG_00971","SJAG_02529","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91472,92621,92970,93038,96802,100204,101176,103787,106179,107566,108764,109993,114543],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[90564],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[110139,113799,84370,87870,86378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[100247,113800,105139,113809],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84858],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[105369,93685,87603,101027,106180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[115018,94915,103450,93645,114544,95907,87397,93686,95975,112967,101342,114837,95906,106181,91473,109994,97788],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[95909,99000,100205,102893,103788,88394,95908,93646,92971,109995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107258],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[98369],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86852],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88289],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[95910,95911,96194,102070,90605,112020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which cells that are products of meiosis acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota).","definition_xrefs":["GOC:di","GOC:mah","GOC:mcc","PMID:16339736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007151"],"synonyms":[{"name":"ascospore biosynthesis","type":"exact"},{"name":"spore formation","type":"broad"},{"name":"sporulation","type":"broad"}],"termid":"GO:0030437","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: MOD:00466
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to a glycosylsphingolipidinositolethanolamidated.","definition_xrefs":["PubMed:18688235","PubMed:8404891","PubMed:12626404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylsphingolipidinositolated residue","synonyms":[{"name":"GSIRes","type":"exact"}],"termid":"MOD:00466"}


id: GO:1903387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["PMID:21724833","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"positively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of homophilic cell adhesion","synonyms":[{"name":"activation of homophilic cell adhesion","type":"narrow"},{"name":"up regulation of homophilic cell adhesion","type":"exact"},{"name":"up-regulation of homophilic cell adhesion","type":"exact"},{"name":"upregulation of homophilic cell adhesion","type":"exact"}],"termid":"GO:1903387"}


id: PBO:0090681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0090681"}


id: GO:0047957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formononetin + NADPH + O2 = 2'-hydroxyformononetin + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.89","MetaCyc:ISOFLAVONE-2-HYDROXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4'-methoxyisoflavone 2'-hydroxylase activity","secondary_identifiers":["RHEA:12388"],"synonyms":[{"name":"formononetin,NADPH:oxygen oxidoreductase (2'-hydroxylating)","type":"related"},{"name":"isoflavone 2'-monooxygenase activity","type":"broad"}],"termid":"GO:0047957"}


id: PBO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid","termid":"PBO:0000554"}


id: PBO:0052109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A regulatory beta subunit 2","termid":"PBO:0052109"}


id: PBO:0056412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 9","termid":"PBO:0056412"}


id: GO:0110108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["PMID:11861482","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"},{"relation_name":"positively_regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc-derived wing vein specification","termid":"GO:0110108"}


id: PATO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis.","definition_xrefs":["PATOC:MSP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorso-ventrally flattened","termid":"PATO:0002053"}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: GO:2000957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"regulates","term_name":"cyclodextrin catabolic process","termid":"GO:2000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cyclodextrin catabolic process","synonyms":[{"name":"regulation of cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000957"}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: SO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological DNA region implicated in epigenomic changes caused by mechanisms other than changes in the underlying DNA sequence. This includes, nucleosomal histone post-translational modifications, nucleosome depletion to render DNA accessible and post-replicational base modifications such as cytosine modification.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically_modified_region","synonyms":[{"name":"epigenetically modified region","type":"related"}],"termid":"SO:0001720"}


id: GO:0004380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-N-acetyl-alpha-D-galactosaminyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose.","definition_xrefs":["EC:2.4.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140096","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9034042","MetaCyc:2.4.1.40-RXN","Reactome:R-HSA-9033959","RHEA:19021"],"synonyms":[{"name":"A transferase activity","type":"related"},{"name":"A-transferase activity","type":"related"},{"name":"UDP-GalNAc:Fucalpha1->2Galalpha1->3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:alpha-L-fucosyl-1,2-D-galactose 3-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose 3-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"alpha-3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"blood-group substance A-dependent acetylgalactosaminyltransferase activity","type":"related"},{"name":"blood-group substance alpha-acetyltransferase activity","type":"related"},{"name":"fucosylgalactose acetylgalactosaminyltransferase activity","type":"related"},{"name":"fucosylgalactose alpha-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"histo-blood group A acetylgalactosaminyltransferase activity","type":"narrow"},{"name":"histo-blood group A glycosyltransferase (Fucalpha1->2Galalpha1->3-N-acetylgalactosaminyltransferase)","type":"related"},{"name":"histo-blood group A transferase activity","type":"related"}],"termid":"GO:0004380"}


id: PBO:0049626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 29","termid":"PBO:0049626"}


id: SO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:011"],"synonyms":[{"name":"N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-threonylcarbamoyladenosine","type":"exact"},{"name":"t6A","type":"exact"}],"termid":"SO:0001305"}


id: PBO:0046031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha","termid":"PBO:0046031"}


id: GO:0090647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the processes that arise as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["GOC:kmv","PMID:20523893","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of age-related behavioral decline (obsolete GO:0090647)","termid":"GO:0090647"}


id: PBO:0005443
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.3.2.6","termid":"PBO:0005443"}


id: PBO:0029948
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029948"}


id: PBO:0029970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_cell_cycle","termid":"PBO:0029970"}


id: PBO:0062813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 4","termid":"PBO:0062813"}


id: PBO:0058345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4718","termid":"PBO:0058345"}


id: PBO:0048489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 1","termid":"PBO:0048489"}


id: GO:0035637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information occurring at the level of a multicellular organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal signaling (obsolete GO:0035637)","synonyms":[{"name":"multicellular organismal signalling","type":"exact"}],"termid":"GO:0035637"}


id: GO:0061920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + lysine in peptide = CoA + N-propionyl-lysine-peptide.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"protein propionyltransferase activity","secondary_identifiers":["RHEA:54020"],"termid":"GO:0061920"}


id: PBO:0109976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated heterodimeric guanine nucleotide exchange factor (GEF) subunit Aut12","termid":"PBO:0109976"}


id: PBO:0066501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raftlin family member 2","termid":"PBO:0066501"}


id: GO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.","definition_xrefs":["GOC:mah","PMID:1402651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}


id: PBO:0091322
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate KM, thiamine KM 6 uM","termid":"PBO:0091322"}


id: GO:0045018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from the vacuole to the trans-Golgi network; this occurs in yeast via the prevacuolar/endosomal compartment.","definition_xrefs":["PMID:9700156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde transport, vacuole to Golgi","synonyms":[{"name":"retrograde transport from the vacuole","type":"exact"}],"termid":"GO:0045018"}


id: PR:Q9C0U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug153 gene.","definition_xrefs":["UniProtKB:Q9C0U3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 153 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.19","synonyms":[{"name":"Spom972h-mug153","type":"exact"}],"termid":"PR:Q9C0U3"}


id: PBO:0002722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein","termid":"PBO:0002722"}


id: PBO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_acetylation_during_vegetative_growth","termid":"PBO:0035797"}


id: PBO:0076104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 8 pseudogene 1","termid":"PBO:0076104"}


id: PBO:0062826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor 1","termid":"PBO:0062826"}


id: PBO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 1","termid":"PBO:0071138"}


id: PBO:0056235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGI2 antisense RNA 2","termid":"PBO:0056235"}


id: FYPO:0002405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable stubby vegetative cell","termid":"FYPO:0002106"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable curved stubby vegetative cell","synonyms":[{"name":"curved stubby viable cell","type":"exact"},{"name":"viable curved stubby cell during vegetative growth","type":"exact"},{"name":"viable curved stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002405"}


id: GO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of leaf primordia around the center of a shoot apical meristem.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf phyllotactic patterning","termid":"GO:0060772"}


id: FYPO:0003813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type) near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome positioning at stress response genes","synonyms":[{"name":"normal nucleosome occupancy at stress response genes","type":"related"},{"name":"normal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003813"}


id: PBO:0083660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized integral membrane protein; may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression","termid":"PBO:0083660"}


id: GO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061395)","termid":"GO:0061395"}


id: PBO:0044725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 13 (pseudogene)","termid":"PBO:0044725"}


id: GO:0006303
data:
  {"annotated_genes":["SJAG_02237","SJAG_05372","SJAG_00640","SJAG_00823","SJAG_04372","SJAG_16460","SJAG_00441","SJAG_05373","SJAG_01677","SJAG_04199","SJAG_01076","SJAG_02527","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84700,85304,91978,96010,101081,107006,107786,110337,112376,112844],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[112375,109955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[91980],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[98447],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[103472],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["PMID:24837021","GOC:rph","PMID:10827453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: PBO:0002792
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear elongation and deformation","termid":"PBO:0002792"}


id: PBO:0063846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase inhibitor 16","termid":"PBO:0063846"}


id: PBO:0061789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 1","termid":"PBO:0061789"}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: PR:O14157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.05c","synonyms":[{"name":"Spom972h-myp2","type":"exact"},{"name":"myosin type II heavy chain 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14157"}


id: GO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of the enzyme lipoprotein lipase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein lipase activity","termid":"GO:0051004"}


id: PBO:0074959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-1","termid":"PBO:0074959"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: GO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel maturation","termid":"GO:0001955"}


id: SO:1000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000102 sequence_variant_affecting_level_of_translational_product (obsolete SO:1000102)","synonyms":[{"name":"mutation affecting level of translational product","type":"related"},{"name":"sequence variant affecting level of translational product","type":"exact"}],"termid":"SO:1000102"}


id: GO:1901314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2A K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2A K63-linked ubiquitination (obsolete GO:1901314)","termid":"GO:1901314"}


id: PBO:0073862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: PBO:0051205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-31","termid":"PBO:0051205"}


id: GO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylmercury (MeHg+), a highly toxic organometal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmercury metabolic process","termid":"GO:0042191"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methylmercury catabolic process","synonyms":[{"name":"methylmercury breakdown","type":"exact"},{"name":"methylmercury catabolism","type":"exact"},{"name":"methylmercury degradation","type":"exact"}],"termid":"GO:0042193"}


id: PBO:0052917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 17-1","termid":"PBO:0052917"}


id: PR:Q10084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.05","synonyms":[{"name":"Spom972h-mfs2","type":"exact"}],"termid":"PR:Q10084"}


id: GO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a vestibular receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell fate commitment","synonyms":[{"name":"vestibular hair cell fate commitment","type":"exact"}],"termid":"GO:0060115"}


id: GO:0052365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont xylan (obsolete GO:0052365)","termid":"GO:0052365"}


id: GO:0097114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:15620359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"NMDA glutamate receptor clustering","synonyms":[{"name":"N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"NMDA receptor clustering","type":"exact"}],"termid":"GO:0097114"}


id: GO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial protein complex which is capable of 3-methylcrotonyl-CoA carboxylase activity. In mammals, at least, consists as a dodecamer of 6 alpha and 6 beta subunits. MCCC-alpha has a covalently bound biotin essential for the ATP-dependent carboxylation. MCCC-beta possesses carboxyltransferase activity which presumably is essential for binding to 3-methylcrotonyl-CoA.","definition_xrefs":["GOC:hjd","PMID:15868465","GOC:bf","PMID:17360195","PMID:22869039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"methylcrotonoyl-CoA carboxylase complex","termid":"GO:1905202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase complex, mitochondrial","synonyms":[{"name":"mitochondrial 3-methylcrotonyl-CoA carboxylase holoenzyme","type":"exact"},{"name":"mitochondrial MCCC complex","type":"exact"},{"name":"mitochondrial methylcrotonoyl-CoA carboxylase complex","type":"exact"}],"termid":"GO:0002169"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose-1-phosphate = D-glyceraldehyde + dihydroxyacetone phosphate.","definition_xrefs":["RHEA:30851","GOC:dph","GOC:glycolysis","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["MetaCyc:RXN-8631","Reactome:R-HSA-70342","Reactome:R-HSA-5656438"],"termid":"GO:0061609"}


id: PBO:0059925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 11","termid":"PBO:0059925"}


id: PR:P56289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif51 gene.","definition_xrefs":["UniProtKB:P56289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.10c","synonyms":[{"name":"Spom972h-tif51","type":"exact"},{"name":"eIF-5A-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56289"}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"NAD(P)-serine ADP-ribosyltransferase activity","termid":"GO:0018127"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: PBO:0077514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM230 pseudogene 2","termid":"PBO:0077514"}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: PBO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 1","termid":"PBO:0050501"}


id: GO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + quercetin 3-sulfate = adenosine 3',5'-diphosphate + H+ + quercetin 3,4'-disulfate.","definition_xrefs":["RHEA:17205","EC:2.8.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"quercetin-3-sulfate 4'-sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02633","MetaCyc:2.8.2.27-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3-sulfate 4'-sulfotransferase activity","type":"related"},{"name":"flavonol 4'-sulfotransferase activity","type":"related"},{"name":"quercetin-3-sulphate 4'-sulphotransferase activity","type":"exact"}],"termid":"GO:0047366"}


id: FYPO:0003520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylselenocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylselenocysteine level","termid":"FYPO:0003523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular hercynylselenocysteine level during vegetative growth","synonyms":[{"name":"increased cellular hercynylselenocysteine level during mitotic cell cycle","type":"related"},{"name":"increased hercynylselenocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003520"}


id: PBO:0077273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14B","termid":"PBO:0077273"}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: MOD:00486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:114#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxProBiotinRed","type":"related"},{"name":"Oxidized proline biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00486"}


id: PBO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 2","termid":"PBO:0045745"}


id: PBO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 4","termid":"PBO:0043211"}


id: PBO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KEX2","termid":"PBO:0008071"}


id: GO:2001224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"positively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron migration","synonyms":[{"name":"positive regulation of neuron chemotaxis","type":"exact"},{"name":"positive regulation of neuron guidance","type":"related"},{"name":"positive regulation of neuronal migration","type":"exact"}],"termid":"GO:2001224"}


id: PBO:0056903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF antisense RNA 1","termid":"PBO:0056903"}


id: GO:0021545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.","definition_xrefs":["GOC:dph","ISBN:0838580343","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial nerve development","termid":"GO:0021545"}


id: PBO:0029632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_barrier_septum_during_septation","termid":"PBO:0029632"}


id: PBO:0038385
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_parasitoid","termid":"PBO:0038385"}


id: GO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a paraxial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"paraxial mesoderm formation","termid":"GO:0048341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell differentiation","termid":"GO:0048342"}


id: PBO:0070551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 17","termid":"PBO:0070551"}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: PBO:0079282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTLL1 antisense RNA 1","termid":"PBO:0079282"}


id: GO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a leucophore cell. Leucophores are pigment cells derived from the neural crest. They contain uric acid or other purine crystals, deposited in stacks called leucosomes. This gives them a white appearance.","definition_xrefs":["GOC:jid","GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucophore differentiation","synonyms":[{"name":"leucophore cell differentiation","type":"exact"}],"termid":"GO:0048772"}


id: PBO:0088236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane voltage-dependent anion-selective channel Por1","termid":"PBO:0088236"}


id: GO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->6)-alpha-D-mannosyloligosaccharide + beta-D-mannosylphosphodecaprenol = (1->6)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-oligosaccharide + decaprenol phosphate.","definition_xrefs":["EC:2.4.1.199","MetaCyc:2.4.1.199-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"beta-mannosylphosphodecaprenol-mannooligosaccharide 6-mannosyltransferase activity","synonyms":[{"name":"beta-D-mannosylphosphodecaprenol:1,6-alpha-D-mannosyloligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"mannosylphospholipid-methylmannoside alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0047252"}


id: PBO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A2","termid":"PBO:0046197"}


id: PBO:0088344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor (GTPase) Mtg2","termid":"PBO:0088344"}


id: FYPO:0002775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of sumoylated protein in cell","synonyms":[{"name":"decreased accumulation of sumoylated protein in cell","type":"related"},{"name":"decreased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"decreased sumoylated protein level during vegetative growth","type":"exact"},{"name":"reduced level of sumoylated protein in cell","type":"exact"}],"termid":"FYPO:0002775"}


id: GO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of insulin secretion","termid":"GO:0050796"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of insulin secretion","synonyms":[{"name":"down regulation of insulin secretion","type":"exact"},{"name":"down-regulation of insulin secretion","type":"exact"},{"name":"downregulation of insulin secretion","type":"exact"},{"name":"inhibition of insulin secretion","type":"narrow"}],"termid":"GO:0046676"}


id: PBO:0026923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_at_RxxS_site_during_nitrogen_starvation","termid":"PBO:0026923"}


id: FYPO:0000302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a cell's response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal response to pheromone","synonyms":[{"name":"abnormal response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"defective response to pheromone","type":"exact"}],"termid":"FYPO:0000302"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: PBO:0088612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex subunit, human LAMTOR3 ortholog","termid":"PBO:0088612"}


id: PBO:0044660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCUN1D2 antisense RNA","termid":"PBO:0044660"}


id: PBO:0085149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleoside diphosphate kinase; catalyzes the transfer of gamma phosphates from nucleoside triphosphates, usually ATP, to nucleoside diphosphates by a mechanism that involves formation of an autophosphorylated enzyme intermediate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085149"}


id: PBO:0076413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 7","termid":"PBO:0076413"}


id: GO:0031461
data:
  {"annotated_genes":["SJAG_03417","SJAG_04661","SJAG_02822","SJAG_01573","SJAG_05297","SJAG_00071","SJAG_04853","SJAG_04335","SJAG_05329","SJAG_03130","SJAG_02119","SJAG_03651","SJAG_01480","SJAG_01540","SJAG_03351","SJAG_04520","SJAG_04971","SJAG_02162","SJAG_02591","SJAG_01956","SJAG_03680","SJAG_00615","SJAG_03575","SJAG_04574","SJAG_04540","SJAG_03219","SJAG_03728","SJAG_00439","SJAG_00341","SJAG_01801","SJAG_03037","SJAG_02651","SJAG_02044","SJAG_03561","SJAG_00146","SJAG_01022","SJAG_02186","SJAG_00192","SJAG_00666","SJAG_03858","SJAG_02837","SJAG_05236","SJAG_03809","SJAG_00756","SJAG_04142","SJAG_04087","SJAG_03350","SJAG_04180","SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85383],"is_not":false,"summary":null,"term":"GO:0031461"},{"annotations":[63068,92698,109184,103665,86469,108273,89851,91264,87848,95685,96205,78023,97908,98366,96869,102235,79151,78735,95680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[106543,92823,110045,113709,90446,114813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[90620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031463"},{"annotations":[101394,87030,92781,86981,84516,92824,107317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080008"},{"annotations":[107205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"},{"annotations":[78301,95454,107270,93589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035361"},{"annotations":[105144,93869,90449,86727,100921,106382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[94549,98948,93870,84718,91646,101066,111842,86728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019005"}]},"cv_name":"cellular_component","definition":"Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01022":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02044":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_02837":null,"SJAG_03037":null,"SJAG_03130":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03651":null,"SJAG_03680":null,"SJAG_03728":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04087":null,"SJAG_04142":null,"SJAG_04180":null,"SJAG_04335":null,"SJAG_04520":null,"SJAG_04540":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_04971":null,"SJAG_05236":null,"SJAG_05297":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cullin-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CRL complex","type":"exact"},{"name":"cullin complex","type":"exact"},{"name":"cullin-RING ligase","type":"related"}],"termid":"GO:0031461","terms_by_termid":{"GO:0005680":null,"GO:0019005":null,"GO:0031461":null,"GO:0031463":null,"GO:0031464":null,"GO:0035361":null,"GO:0043224":null,"GO:0043494":null,"GO:0080008":null}}


id: PATO:0002523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located at a right angle relative to another entity and to the horizon.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertical to","termid":"PATO:0002523"}


id: PBO:0083801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for the DNA integrity checkpoint pathways; interacts physically with Mec1p and contributes to its activation; putative homolog of S. pombe Rad26 and human ATRIP; forms nuclear foci upon DNA replication stress","termid":"PBO:0083801"}


id: PBO:0089490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit","termid":"PBO:0089490"}


id: PBO:0057761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1976","termid":"PBO:0057761"}


id: PR:O74531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof7 gene.","definition_xrefs":["UniProtKB:O74531","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.08c","synonyms":[{"name":"Spom972h-pof7","type":"exact"}],"termid":"PR:O74531"}


id: GO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Excision from the chromosome and circularization of DNA molecules encoding ribosomal RNA in dividing cells as they age.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging (obsolete GO:0001311)","synonyms":[{"name":"assembly of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging","type":"related"},{"name":"formation of extrachromosomal circular rDNA by homologous recombination during replicative cell ageing","type":"related"},{"name":"formation of extrachromosomal circular rDNA by homologous recombination during replicative cell aging","type":"related"},{"name":"formation of extrachromosomal circular ribosomal DNA by homologous recombination during replicative cell aging","type":"related"}],"termid":"GO:0001311"}


id: PBO:0064151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 3","termid":"PBO:0064151"}


id: PBO:0065185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROSER2 antisense RNA 1","termid":"PBO:0065185"}


id: PBO:0048519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 2","termid":"PBO:0048519"}


id: FYPO:0002674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell periphery","termid":"FYPO:0005572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to plasma membrane","synonyms":[{"name":"normal protein localisation to plasma membrane","type":"exact"},{"name":"normal protein localization to plasma membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to plasma membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0002674"}


id: PBO:0000997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP1/OBG family","termid":"PBO:0000997"}


id: SO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological region implicated in inherited changes caused by mechanisms other than changes in the underlying DNA sequence.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenomically_modified_region","secondary_identifiers":["https://epi.grants.cancer.gov/epigen/#\\:~\\:text=mail.nih.gov-\\,Overview\\,a%20cell%20or%20entire%20organism."],"synonyms":[{"name":"epigenomically modified region","type":"exact"}],"termid":"SO:0002332"}


id: PBO:0110426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 1","termid":"PBO:0110426"}


id: PATO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green and blue hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyan","termid":"PATO:0000319"}


id: PBO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase (predicted)","termid":"PBO:0001321"}


id: GO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-asparagine + H+ + hydroxylamine = beta-L-aspartylhydroxamate + NH4.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyltransferase activity (obsolete GO:0047690)","synonyms":[{"name":"L-asparagine:hydroxylamine gamma-aspartyltransferase activity","type":"related"},{"name":"aspartotransferase activity","type":"related"},{"name":"beta-aspartyl transferase activity","type":"related"}],"termid":"GO:0047690"}


id: PBO:0070549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 15","termid":"PBO:0070549"}


id: PR:Q9UT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC824.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C824.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC824.09c","synonyms":[{"name":"Spom972h-SPAC824.09c","type":"exact"}],"termid":"PR:Q9UT34"}


id: FYPO:0004219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004219"}


id: GO:0047668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-amygdalin + H2O = (R)-prunasin + D-glucose.","definition_xrefs":["RHEA:14177","EC:3.2.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"amygdalin beta-glucosidase activity","secondary_identifiers":["GO:0080080","KEGG_REACTION:R02985","MetaCyc:AMYGDALIN-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"(R)-amygdalin beta-glucosidase activity","type":"exact"},{"name":"amygdalin b-glucosidase activity","type":"exact"},{"name":"amygdalin beta-D-glucohydrolase activity","type":"related"},{"name":"amygdalin glucosidase activity","type":"related"},{"name":"amygdalin hydrolase activity","type":"related"},{"name":"amygdalinase","type":"broad"}],"termid":"GO:0047668"}


id: PBO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 3","termid":"PBO:0046210"}


id: PBO:0078566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 50","termid":"PBO:0078566"}


id: GO:0018929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.","definition_xrefs":["UM-BBD_pathwayID:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methyl fluoride metabolic process","synonyms":[{"name":"methyl fluoride metabolism","type":"exact"}],"termid":"GO:0018929"}


id: GO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell cycle phase","termid":"GO:0022403"}


id: PBO:0085391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane metalloid/H+ antiporter; member of bile/arsenite/riboflavin transporter (BART) superfamily; transports arsenite and antimonite; required for resistance to arsenic compounds; transcription is activated by Arr1p in the presence of arsenite; protein displays 10 transmembrane segments with cytoplasmically oriented N- and C-terminal domains","termid":"PBO:0085391"}


id: PBO:0056038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 3","termid":"PBO:0056038"}


id: GO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"negatively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"negatively_regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein refolding","termid":"GO:0061084"}


id: PBO:0079480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin beta","termid":"PBO:0079480"}


id: GO:0000836
data:
  {"annotated_genes":["SJAG_01709","SJAG_04384","SJAG_03841","SJAG_05274","SJAG_01051","SJAG_01134","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85392,100042,100874,101350,103742,105633,113181],"is_not":false,"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p. In mammals, this complex contains the ubiquitin ligase HRD1 (Synoviolin) or AMFR (gp78).","definition_xrefs":["GOC:elh","PMID:16619026","PMID:21454652","GOC:bf","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005789","GO:0005783","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRD1 ubiquitin ligase complex","type":"related"}],"termid":"GO:0000836","terms_by_termid":{"GO:0000836":null}}


id: PR:O94715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.03","synonyms":[{"name":"Spom972h-rps1501","type":"exact"}],"termid":"PR:O94715"}


id: GO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with decanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein decanoylation","synonyms":[{"name":"protein amino acid decanoylation","type":"exact"}],"termid":"GO:0051366"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: PBO:0108688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex RabGEF subunit Bet3","termid":"PBO:0108688"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109435],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: PBO:0082071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase and alpha-ketoglutarate reductase; 3PG dehydrogenase that catalyzes the first step in serine and glycine biosynthesis; also functions as an alpha-ketoglutarate reductase, converting alpha-ketoglutarate to D-2-hydroxyglutarate (D-2HG); localizes to the cytoplasm; SER3 has a paralog, SER33, that arose from the whole genome duplication","termid":"PBO:0082071"}


id: PBO:0025466
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mrc1 associates with origins later than MCM complex, but slightly earlier than Cdc45","termid":"PBO:0025466"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["RESID:AA0067","RESID:AA0069","PMID:14705965","EC:2.1.1.320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140096","GO:0003824","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["RHEA:48108","Reactome:R-HSA-6804383"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: GO:0006552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine metabolic process","termid":"GO:0006551"},{"relation_name":"is_a","term_name":"pyruvate family amino acid catabolic process","termid":"GO:0009080"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"L-leucine catabolic process","secondary_identifiers":["MetaCyc:LEU-DEG2-PWY"],"synonyms":[{"name":"L-leucine breakdown","type":"exact"},{"name":"L-leucine catabolism","type":"exact"},{"name":"L-leucine degradation","type":"exact"},{"name":"leucine catabolic process","type":"broad"}],"termid":"GO:0006552"}


id: GO:0019810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to putrescine, 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine binding","termid":"GO:0019808"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"putrescine binding","termid":"GO:0019810"}


id: GO:1901352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:12869188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"negatively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylglycerol formation","type":"exact"},{"name":"downregulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"inhibition of phosphatidylglycerol anabolism","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylglycerol formation","type":"narrow"},{"name":"inhibition of phosphatidylglycerol synthesis","type":"narrow"},{"name":"negative regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"negative regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylglycerol formation","type":"exact"},{"name":"negative regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901352"}


id: GO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075159)","synonyms":[{"name":"regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075159"}


id: SO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A loop in ribosomal RNA containing the sites of attack for ricin and sarcin.","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcin_like_RNA_motif","synonyms":[{"name":"sarcin like RNA motif","type":"exact"},{"name":"sarcin/ricin RNA domain","type":"exact"},{"name":"sarcin/ricin domain","type":"exact"},{"name":"sarcin/ricin loop","type":"exact"}],"termid":"SO:0000024"}


id: PBO:0046204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 1","termid":"PBO:0046204"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: PBO:0049303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 4","termid":"PBO:0049303"}


id: PBO:0071174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 15","termid":"PBO:0071174"}


id: PBO:0065790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1","termid":"PBO:0065790"}


id: GO:0010392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactoglucomannan, a polysaccharide composed of D-glucose, D-galactose and D-mannose. The mannose units form the backbone structure (a linear main chain) decorated with a mixture of D-glucose and D-galactose side-units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactoglucomannan metabolic process","synonyms":[{"name":"galactoglucomannan metabolism","type":"related"}],"termid":"GO:0010392"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: PBO:0005371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic Reticulum metallopeptidase 1 (predicted)","termid":"PBO:0005371"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: PBO:0086422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase with a role in biogenesis of RNA pol II and polIII; may be involved in assembly of RNA polymerases II and III and in their transport into the nucleus; may have a role in sister chromatid cohesion; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; contains a Gly-Pro-Asn motif in the G domain; similar to Npa3p and Gpn2p","termid":"PBO:0086422"}


id: PBO:0089072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex WD repeat subunit Gid7","termid":"PBO:0089072"}


id: GO:0106282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta,7beta-dihydroxy-5beta-cholan-24-oate + NAD+ = 3beta-hydroxy-7-oxo-5beta-cholan-24-oate + H+ + NADH.","definition_xrefs":["RHEA:42024","PMID:12917011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isoursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106282"}


id: PBO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit J (predicted)","termid":"PBO:0000744"}


id: PBO:0080437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS53 subunit of GARP complex","termid":"PBO:0080437"}


id: GO:0032265
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89861],"is_not":false,"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces xanthosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"XMP biosynthetic process","termid":"GO:0097293"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"XMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032265","terms_by_termid":{"GO:0032265":null}}


id: PBO:0003148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transporter (predicted)","termid":"PBO:0003148"}


id: FYPO:0004366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic nuclear division results in the connection of both sister kinetochores to microtubules from the same spindle pole.","definition_xrefs":["PMID:17426725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000631","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"syntelic kinetochore attachment during mitosis","synonyms":[{"name":"syntelic attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"syntelic kinetochore attachment during mitotic M phase","type":"related"},{"name":"syntelic kinetochore attachment during mitotic nuclear division","type":"exact"},{"name":"syntelic kinetochore attachment during vegetative growth","type":"exact"}],"termid":"FYPO:0004366"}


id: GO:0009833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of cellulose and pectin-containing cell walls that form adjacent to the middle lamella following cell division and during cell expansion. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0000281","GO:0008150","GO:0007049","GO:0071554"],"is_obsolete":false,"name":"plant-type primary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall anabolism","type":"broad"},{"name":"primary cell wall biogenesis","type":"exact"},{"name":"primary cell wall biosynthetic process","type":"broad"},{"name":"primary cell wall formation","type":"broad"},{"name":"primary cell wall synthesis","type":"broad"}],"termid":"GO:0009833"}


id: PBO:0063863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 2","termid":"PBO:0063863"}


id: PBO:0058678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6806","termid":"PBO:0058678"}


id: PBO:0041536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 67","termid":"PBO:0041536"}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: PR:O14219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.14c","synonyms":[{"name":"Spom972h-SPAC6B12.14c","type":"exact"}],"termid":"PR:O14219"}


id: FYPO:0003950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is decreased.","definition_xrefs":["PMID:12925774","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0003950"}


id: PBO:0017469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_during","termid":"PBO:0017469"}


id: GO:1990275
data:
  {"annotated_genes":["SJAG_04599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100360],"is_not":false,"summary":null,"term":"GO:1990275"}]},"cv_name":"molecular_function","definition":"Binding to a preribosome.","definition_xrefs":["PMID:22735702","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"preribosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990275","terms_by_termid":{"GO:1990275":null}}


id: GO:0043327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of 3',5'-cAMP.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to cAMP","synonyms":[{"name":"chemotaxis to 3',5' cAMP","type":"exact"},{"name":"chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"chemotaxis to cyclic AMP","type":"exact"}],"termid":"GO:0043327"}


id: PBO:0089431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1","termid":"PBO:0089431"}


id: PR:Q9UST1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk26 gene.","definition_xrefs":["UniProtKB:Q9UST1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit pan3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.14c","synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ppk26","type":"exact"}],"termid":"PR:Q9UST1"}


id: PATO:0001857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in a bearer by virtue of the bearer's curving inward.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave","termid":"PATO:0001857"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: PBO:0049435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 12","termid":"PBO:0049435"}


id: PBO:0074908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 79","termid":"PBO:0074908"}


id: GO:0071902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"}


id: GO:1902471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring localization.","definition_xrefs":["PMID:19959363","PMID:22786806","GOC:TermGenie","PMID:21246752"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring localization (obsolete GO:1902471)","termid":"GO:1902471"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: PBO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha6","termid":"PBO:0048202"}


id: PBO:0068122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 429","termid":"PBO:0068122"}


id: GO:2001126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational elongation","termid":"GO:0045901"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"positively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational frameshifting","termid":"GO:2001126"}


id: PBO:0039118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 1","termid":"PBO:0039118"}


id: GO:0000494
data:
  {"annotated_genes":["SJAG_00943","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104160,106264],"is_not":false,"summary":null,"term":"GO:0000494"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a box C/D RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"},{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"box C/D sno(s)RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D RNA 3' end processing","type":"exact"},{"name":"box C/D sRNA 3'-end processing","type":"narrow"},{"name":"box C/D snoRNA 3'-end processing","type":"narrow"}],"termid":"GO:0000494","terms_by_termid":{"GO:0000494":null}}


id: PBO:0005719
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary leiomyomatosis","termid":"PBO:0005719"}


id: GO:0070630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->4)-alpha-glucans, compounds composed of glucose residues linked by (1->4)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->4)-alpha-glucan metabolic process","termid":"GO:0070629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->4)-alpha-glucan biosynthetic process","synonyms":[{"name":"(1->4)-alpha-D-glucan anabolism","type":"exact"},{"name":"(1->4)-alpha-D-glucan biosynthesis","type":"exact"},{"name":"(1->4)-alpha-D-glucan formation","type":"exact"},{"name":"(1->4)-alpha-D-glucan synthesis","type":"exact"},{"name":"1,4-alpha-glucan anabolism","type":"exact"},{"name":"1,4-alpha-glucan biosynthesis","type":"exact"},{"name":"1,4-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,4-alpha-glucan formation","type":"exact"},{"name":"1,4-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,4 glucan anabolism","type":"exact"},{"name":"alpha-1,4 glucan biosynthesis","type":"exact"},{"name":"alpha-1,4 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,4 glucan formation","type":"exact"},{"name":"alpha-1,4 glucan synthesis","type":"exact"}],"termid":"GO:0070630"}


id: GO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the spatial subdivision of an axis or axes along the foregut to define an area or volume in which specific patterns of cell differentiation will take place.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foregut regionalization","termid":"GO:0060423"}


id: GO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the sepal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal structural organization","secondary_identifiers":["GO:0048424"],"synonyms":[{"name":"sepal structural organisation","type":"exact"}],"termid":"GO:0048454"}


id: PATO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involute","termid":"PATO:0001962"}


id: GO:0100062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that positively_regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100062)","termid":"GO:0100062"}


id: PR:Q09189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase PTC7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01568","PANTHER:PTHR12320:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-azacytidine resistance protein azr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.03","secondary_identifiers":["UniProtKB:Q09189"],"synonyms":[{"name":"Spom972h-PPTC7","type":"exact"}],"termid":"PR:Q09189"}


id: FYPO:0001929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to hydroxyurea","termid":"FYPO:0001926"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle arrest in response to HU","type":"narrow"},{"name":"normal cell cycle delay following hydroxyurea exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to HU","type":"exact"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to hydroxyurea","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001929"}


id: GO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity (obsolete GO:0004871)","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity","type":"narrow"},{"name":"quorum sensing response regulator activity","type":"narrow"},{"name":"quorum sensing signal generator activity","type":"narrow"}],"termid":"GO:0004871"}


id: PBO:0046482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6 like, spindle assembly checkpoint helicase","termid":"PBO:0046482"}


id: GO:0051028
data:
  {"annotated_genes":["SJAG_00375","SJAG_01467","SJAG_01065","SJAG_03283","SJAG_04480","SJAG_00178","SJAG_00298","SJAG_04379","SJAG_01449","SJAG_04656","SJAG_03002","SJAG_01374","SJAG_01584","SJAG_03847","SJAG_04347","SJAG_01652","SJAG_03693","SJAG_04115","SJAG_00992","SJAG_00641","SJAG_03593","SJAG_03986","SJAG_02534","SJAG_01185","SJAG_04645","SJAG_04202","SJAG_03300","SJAG_04472","SJAG_04017","SJAG_04721","SJAG_04310","SJAG_05328","SJAG_01715","SJAG_01529","SJAG_02425","SJAG_00093","SJAG_04536","SJAG_01083","SJAG_04589","SJAG_02704","SJAG_00471","SJAG_02209","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58090,59272,63923],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[85144,93200,101437,110942,100019,86736,111554,99078,85617,97226,113289,113415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[104758,103702,112363,114929,98825,93049,98726,92635,105924,114033,87070,106491,111040,102222,112615,112468,100020,97467,97941,109306,111555,68837,101800,112106,107809,111848,98043,107179,110511,88295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02425":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mRNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051028","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null}}


id: GO:1901701
data:
  {"annotated_genes":["SJAG_04953","SJAG_01734","SJAG_05181","SJAG_04399","SJAG_04632","SJAG_00668","SJAG_00141","SJAG_01162","SJAG_04312","SJAG_03653","SJAG_02444","SJAG_01754","SJAG_06611","SJAG_05256","SJAG_04403","SJAG_02515","SJAG_00574","SJAG_01457","SJAG_04823","SJAG_00472","SJAG_01199","SJAG_02960","SJAG_04026","SJAG_04788","SJAG_01254","SJAG_01216","SJAG_03303","SJAG_01699","SJAG_03081","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102906,112611,102550,97924,105588,90328,101958,111572,105078],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108787],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[113395,91296,96074,104895,114292,101095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101098],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[96075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[91640,99557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[85540,85127,67567,58058,95357,106157,89228,96235,64545,106202],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901701","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0034614":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0085072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-proteolytic ATPase of the AAA family; stimulates incorporation of the pyridoxal phosphate cofactor into Hem1p (5-aminolevulinic acid synthase); localized to the mitochondrial matrix; ortholog of vertebrate CLPX, which promotes erythropoiesis","termid":"PBO:0085072"}


id: PBO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 2","termid":"PBO:0043588"}


id: GO:0016515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-13 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-13 receptor activity","synonyms":[{"name":"IL-13 receptor activity","type":"exact"},{"name":"IL-13R","type":"exact"}],"termid":"GO:0016515"}


id: GO:1990809
data:
  {"annotated_genes":["SJAG_05289","SJAG_03812","SJAG_03795","SJAG_01460","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99536,104625,104705,111017,114598],"is_not":false,"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network membrane.","definition_xrefs":["PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"},{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990809","terms_by_termid":{"GO:1990809":null}}


id: PBO:0074058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A36 pseudogene 1","termid":"PBO:0074058"}


id: FYPO:0003741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which cytochrome-c oxidase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"},{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000138","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished cytochrome-c oxidase activity","synonyms":[{"name":"cytochrome-c oxidase activity abolished","type":"exact"}],"termid":"FYPO:0003741"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: PBO:0084197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF2); contributes to telomeric silencing; involved in mRNA multiplexing; N-terminal domain involved in maintaining genomic integrity","termid":"PBO:0084197"}


id: GO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"negatively_regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"}


id: PBO:0034408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes_to_(obsolete_localizes_to)","termid":"PBO:0034408"}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: PBO:0068559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 10, pseudogene","termid":"PBO:0068559"}


id: GO:0033388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"putrescine biosynthetic process","termid":"GO:0009446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine","synonyms":[{"name":"putrescine anabolism from arginine","type":"exact"},{"name":"putrescine biosynthesis from arginine","type":"exact"},{"name":"putrescine formation from arginine","type":"exact"},{"name":"putrescine synthesis from arginine","type":"exact"}],"termid":"GO:0033388"}


id: PBO:0074541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synuclein gamma","termid":"PBO:0074541"}


id: PR:O74923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.13 gene.","definition_xrefs":["UniProtKB:O74923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C757.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.13","synonyms":[{"name":"Spom972h-SPCC757.13","type":"exact"}],"termid":"PR:O74923"}


id: PBO:0084571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in zinc ion homeostasis; member of the four-protein IZH family; transcription is regulated directly by Zap1p, expression induced by zinc deficiency and fatty acids; deletion increases sensitivity to elevated zinc; IZH1 has a paralog, IZH4, that arose from the whole genome duplication","termid":"PBO:0084571"}


id: GO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hydrogen ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hydrogen ion","termid":"GO:0003030"}


id: GO:0031832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 6 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 6 receptor binding","type":"exact"},{"name":"type 6 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031832"}


id: PBO:0026854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_central_core","termid":"PBO:0026854"}


id: PBO:0040484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7","termid":"PBO:0040484"}


id: PBO:0046035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 3","termid":"PBO:0046035"}


id: PBO:0078414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 8-1","termid":"PBO:0078414"}


id: PBO:0017890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3 (predicted)","termid":"PBO:0017890"}


id: PBO:0111526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 6","termid":"PBO:0111526"}


id: PR:O94727
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- frp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric/cupric reductase transmembrane component 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.05c","synonyms":[{"name":"Spom972h-frp2","type":"exact"},{"name":"ferric-chelate reductase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94727"}


id: PBO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 132","termid":"PBO:0075082"}


id: PBO:0079384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 2","termid":"PBO:0079384"}


id: GO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 5'-deoxyadenosine + 7,8-didemethyl-8-hydroxy-5-deazariboflavin + H+ + L-methionine + NH4+.","definition_xrefs":["PMID:14593448","RHEA:55204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity","secondary_identifiers":["MetaCyc:RXN-19230","EC:4.3.1.32"],"synonyms":[{"name":"FO synthase","type":"exact"}],"termid":"GO:0044689"}


id: PATO:0000989
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000989 absolute consistency value (obsolete PATO:0000989)","termid":"PATO:0000989"}


id: GO:0016135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of saponins, glycosides of plants in which the aglycan (sapogenin) group is a terpene or steroid and the sugar group is a glucose, a galactose, a pentose, a methylpentose or an oligosaccharide. Saponins are powerful surfactant agents and membrane active; they are, hence, toxic to animals on injection.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saponin metabolic process","termid":"GO:0016134"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"saponin biosynthetic process","synonyms":[{"name":"saponin anabolism","type":"exact"},{"name":"saponin biosynthesis","type":"exact"},{"name":"saponin formation","type":"exact"},{"name":"saponin synthesis","type":"exact"}],"termid":"GO:0016135"}


id: MOD:01277
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:253#C","PubMed:11283024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crotonaldehyde","termid":"MOD:00576"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde - site C","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:01277"}


id: PBO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Prr1","termid":"PBO:0002167"}


id: PBO:0068801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 38, pseudogene","termid":"PBO:0068801"}


id: GO:0140359
data:
  {"annotated_genes":["SJAG_03785","SJAG_03497","SJAG_04167","SJAG_01344","SJAG_02457","SJAG_04277","SJAG_02602","SJAG_03850","SJAG_03363","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96956,97666],"is_not":false,"summary":null,"term":"GO:0140359"},{"annotations":[85412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[93156,114211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[113968,92175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane.","definition_xrefs":["PMID:26517899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_03363":null,"SJAG_03497":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_04167":null,"SJAG_04277":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-266070","Reactome:R-HSA-5362459","Reactome:R-HSA-9661405","Reactome:R-HSA-9750656","Reactome:R-HSA-429157","Reactome:R-HSA-5387389","TC:3.A.1","Wikipedia:ATP-binding_cassette_transporter"],"synonyms":[{"name":"ABC transporter","type":"exact"},{"name":"ABC-type efflux permease activity","type":"exact"},{"name":"ABC-type efflux porter activity","type":"exact"},{"name":"ABC-type transmembrane transporter activity","type":"exact"},{"name":"ABC-type uptake permease activity","type":"exact"},{"name":"ATP binding cassette transporter","type":"exact"},{"name":"ATP-binding cassette (ABC) transporter activity","type":"exact"},{"name":"ATP-binding cassette transporter","type":"exact"}],"termid":"GO:0140359","terms_by_termid":{"GO:0008559":null,"GO:0015410":null,"GO:0015421":null,"GO:0044604":null,"GO:0140359":null,"GO:0140481":null,"GO:0140679":null}}


id: PBO:0027477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_cell_division_prior_to_G0_entry","termid":"PBO:0027477"}


id: PBO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A9","termid":"PBO:0039627"}


id: GO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides the spatial regions of an embryo into serially repeated regions.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning","termid":"GO:0007365"}


id: SO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Nine nucleotide recombination site, part of V-gene, D-gene or J-gene recombination feature of an immunoglobulin or T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","synonyms":[{"name":"nonamer of recombination feature of vertebrate immune system gene","type":"exact"}],"termid":"SO:0000562"}


id: PBO:0059856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase","termid":"PBO:0059856"}


id: PBO:0084249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD3 has a paralog, IMD4, that arose from the whole genome duplication","termid":"PBO:0084249"}


id: PBO:0051286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-33","termid":"PBO:0051286"}


id: PR:O42898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A catechol O-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02560","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catechol O-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.03","secondary_identifiers":["UniProtKB:O42898"],"synonyms":[{"name":"Spom972h-COMT","type":"exact"}],"termid":"PR:O42898"}


id: GO:0038015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of an insulin receptor activates or increases the frequency, rate or extent of the insulin receptor signaling pathway. Endocytosis of activated receptors can concentrate receptors within endosomes and allow the insulin receptor to phosphorylate substrates that are spatially distinct from those accessible at the plasma membrane.","definition_xrefs":["PMID:9609114","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"},{"relation_name":"is_a","term_name":"insulin receptor internalization","termid":"GO:0038016"},{"relation_name":"is_a","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of insulin receptor signaling pathway by insulin receptor internalization","synonyms":[{"name":"positive regulation of insulin receptor signalling pathway by insulin receptor internalization","type":"exact"}],"termid":"GO:0038015"}


id: PBO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 (predicted)","termid":"PBO:0000191"}


id: PATO:0001635
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality (continuant) inhering in a bearer by virtue of the bearer's being essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity (continuant)","termid":"PATO:0001634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (continuant)","termid":"PATO:0001635"}


id: PBO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Bzz1","termid":"PBO:0090719"}


id: PBO:0068479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 58, pseudogene","termid":"PBO:0068479"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0063220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 9","termid":"PBO:0063220"}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["UniProtKB:Q9P7F9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: GO:0004450
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95855],"is_not":false,"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH.","definition_xrefs":["RHEA:19629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.1.42","MetaCyc:ISOCITDEH-RXN","Reactome:R-HSA-389550","Reactome:R-HSA-389540","Reactome:R-HSA-450984"],"synonyms":[{"name":"NADP isocitric dehydrogenase activity","type":"exact"},{"name":"NADP(+)-ICDH activity","type":"related"},{"name":"NADP(+)-IDH activity","type":"related"},{"name":"NADP(+)-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-dependent isocitric dehydrogenase activity","type":"exact"},{"name":"NADP-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NADP-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"dual-cofactor-specific isocitrate dehydrogenase activity","type":"related"},{"name":"isocitrate (NADP) dehydrogenase activity","type":"exact"},{"name":"isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP) activity","type":"exact"},{"name":"isocitrate dehydrogenase (NADP-dependent) activity","type":"exact"},{"name":"isocitrate:NADP+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"triphosphopyridine nucleotide-linked isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004450","terms_by_termid":{"GO:0004450":null}}


id: PBO:0027988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology,_enlarged_nucleus","termid":"PBO:0027988"}


id: PBO:0049690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAND2 antisense RNA 1","termid":"PBO:0049690"}


id: PBO:0084950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL63 trans-acting MAL-activator, MAL61 maltose permease, and MAL62 maltase; on the left arm of Chromosome VIII, but not in strain S288C","termid":"PBO:0084950"}


id: GO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP506 chromophore cross-link from the alpha-carboxyl carbon of residue n, an asparagine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["PMID:10504696","RESID:AA0380"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-asparagine 5-imidazolinone glycine (obsolete GO:0051360)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051360"}


id: GO:1990050
data:
  {"annotated_genes":["SJAG_06440","SJAG_00576","SJAG_00230"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97360,98297,105581],"is_not":false,"summary":null,"term":"GO:1990050"}]},"cv_name":"molecular_function","definition":"Removes a phosphatidic acid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. Phosphatidic acid refers to a glycophospholipids with, in general, a saturated fatty acid bonded to carbon-1, an unsaturated fatty acid bonded to carbon-2, and a phosphate group bonded to carbon-3.","definition_xrefs":["PMID:23042293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidic acid transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane PA transfer activity","type":"exact"},{"name":"intermembrane phosphatidic acid transfer activity","type":"narrow"},{"name":"phosphatidic acid carrier activity","type":"exact"},{"name":"phosphatidic acid transporter activity","type":"broad"}],"termid":"GO:1990050","terms_by_termid":{"GO:1990050":null}}


id: PBO:0005741
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extragenic Suppressor of Pim","termid":"PBO:0005741"}


id: PBO:0082039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases, induced by oxidative and osmotic stress, confers 2-deoxyglucose resistance when overexpressed; DOG2 has a paralog, DOG1, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082039"}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: PATO:0002403
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Affecting all regions without specificity of distribution.","definition_xrefs":["PATOC:MPTH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized","synonyms":[{"name":"generalised","type":"exact"}],"termid":"PATO:0002403"}


id: GO:0050130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-2-oxoglutaramate + H2O = 2-oxoglutarate + methylammonium.","definition_xrefs":["EC:3.5.1.36","RHEA:24108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-methyl-2-oxoglutaramate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01587","MetaCyc:N-METHYL-2-OXOGLUTARAMATE-HYDROLASE-RXN"],"synonyms":[{"name":"5-hydroxy-N-methylpyroglutamate synthase activity","type":"related"},{"name":"N-methyl-2-oxoglutaramate methylamidohydrolase activity","type":"related"}],"termid":"GO:0050130"}


id: PBO:0026859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_in_anaphase-promoting_complex","termid":"PBO:0026859"}


id: GO:0071089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGAV-ITGB3-TGM2 complex","type":"narrow"}],"termid":"GO:0071089"}


id: GO:0015233
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104352],"is_not":false,"summary":null,"term":"GO:0015233"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of pantothenate across a membrane. Pantothenate is the anion of pantothenic acid, the amide of beta-alanine and pantoic acid; it is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pantothenate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pantothenate transporter activity","type":"broad"},{"name":"vitamin B5 transmembrane transporter activity","type":"exact"}],"termid":"GO:0015233","terms_by_termid":{"GO:0015233":null}}


id: PBO:0001616
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large and Small Daughter","termid":"PBO:0001616"}


id: GO:0010139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway by which pyrimidine bases or pyrimidine deoxyribonucleotides from pyrimidine nucleotide breakdown are converted back to pyrimidine deoxyribonucleotides. The salvage pathway is important where there is no de novo pyrimidine deoxyribonucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide salvage","termid":"GO:0032262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleotide salvage","secondary_identifiers":["MetaCyc:PWY-7199"],"termid":"GO:0010139"}


id: PBO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-c","termid":"PBO:0003271"}


id: PBO:0090124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protease Ste24","termid":"PBO:0090124"}


id: GO:0044322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins.","definition_xrefs":["PMID:11408579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum quality control compartment","synonyms":[{"name":"ER quality control compartment","type":"exact"},{"name":"ER-derived quality control compartment","type":"related"},{"name":"ERQC","type":"exact"}],"termid":"GO:0044322"}


id: PBO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-8 (pseudogene)","termid":"PBO:0051356"}


id: GO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates pyrimidine-containing compound salvage.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter (obsolete GO:0100068)","termid":"GO:0100068"}


id: GO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaflet formation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leaf morphogenesis","termid":"GO:1901371"},{"relation_name":"regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaflet formation","termid":"GO:0090016"}


id: GO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex which catalyzes the biosynthesis of cellulose for the plant primary cell wall. In Arabidopsis, contains the essential component proteins CESA1 and -3, and a CESA6-related protein.","definition_xrefs":["GOC:mengo_curators","PMID:17878302","GOC:tt","PMID:21307367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase complex","termid":"GO:0010330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"primary cell wall cellulose synthase complex","synonyms":[{"name":"primary cell wall CESA complex","type":"exact"},{"name":"primary cell-wall cellulose synthase complex","type":"exact"}],"termid":"GO:0044567"}


id: PBO:0069099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 346, pseudogene","termid":"PBO:0069099"}


id: PBO:0039762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APRG1 tumor suppressor candidate","termid":"PBO:0039762"}


id: PBO:0056155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage enriched lincRNA repressor of IFN-gamma signaling","termid":"PBO:0056155"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: FYPO:0007989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur because the nuclei fail to come in physical contact.","definition_xrefs":["PMID:25869666","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear congression during mating","termid":"FYPO:0003062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000301","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear congression during mating","termid":"FYPO:0007989"}


id: PR:O43012
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dcd1 gene.","definition_xrefs":["UniProtKB:O43012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.13c","synonyms":[{"name":"Spom972h-dcd1","type":"exact"},{"name":"dCMP deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43012"}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901296)","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: PBO:0042949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3","termid":"PBO:0042949"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: FYPO:0003663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA pyrophosphohydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal RNA pyrophosphohydrolase activity","termid":"FYPO:0003663"}


id: PATO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000863 righting reflex value (obsolete PATO:0000863)","termid":"PATO:0000863"}


id: PBO:0109460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER Rft1","termid":"PBO:0109460"}


id: PBO:0065461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD6 antisense RNA 1","termid":"PBO:0065461"}


id: GO:1903267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:12679340","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"negatively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of ornithine catabolic process","synonyms":[{"name":"down regulation of ornithine breakdown","type":"exact"},{"name":"down regulation of ornithine catabolic process","type":"exact"},{"name":"down regulation of ornithine catabolism","type":"exact"},{"name":"down regulation of ornithine degradation","type":"exact"},{"name":"down-regulation of ornithine breakdown","type":"exact"},{"name":"down-regulation of ornithine catabolic process","type":"exact"},{"name":"down-regulation of ornithine catabolism","type":"exact"},{"name":"down-regulation of ornithine degradation","type":"exact"},{"name":"downregulation of ornithine breakdown","type":"exact"},{"name":"downregulation of ornithine catabolic process","type":"exact"},{"name":"downregulation of ornithine catabolism","type":"exact"},{"name":"downregulation of ornithine degradation","type":"exact"},{"name":"inhibition of ornithine breakdown","type":"narrow"},{"name":"inhibition of ornithine catabolic process","type":"narrow"},{"name":"inhibition of ornithine catabolism","type":"narrow"},{"name":"inhibition of ornithine degradation","type":"narrow"},{"name":"negative regulation of ornithine breakdown","type":"exact"},{"name":"negative regulation of ornithine catabolism","type":"exact"},{"name":"negative regulation of ornithine degradation","type":"exact"}],"termid":"GO:1903267"}


id: PBO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 2","termid":"PBO:0043372"}


id: PBO:0066640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal modification protein rimK like family member B pseudogene 1","termid":"PBO:0066640"}


id: PR:O60059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C56F2.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.08c","synonyms":[{"name":"Spom972h-puf1","type":"exact"}],"termid":"PR:O60059"}


id: FYECO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a copper chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ copper chelator","synonyms":[{"name":"+ tetrathiomolybdate","type":"narrow"}],"termid":"FYECO:0000321"}


id: GO:0046247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenes, any of a large group of hydrocarbons made up of isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"},{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"terpene catabolic process","synonyms":[{"name":"terpene breakdown","type":"exact"},{"name":"terpene catabolism","type":"exact"},{"name":"terpene degradation","type":"exact"}],"termid":"GO:0046247"}


id: RO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a localization process (localization covers maintenance of localization as well as its establishment)  and the outcome of this process is to regulate the localization of c.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transports_or_maintains_localization_of","termid":"RO:0002313"}


id: GO:0051058
data:
  {"annotated_genes":["SJAG_00229","SJAG_02379","SJAG_04455","SJAG_03508","SJAG_06270","SJAG_04943","SJAG_02514","SJAG_03353","SJAG_01386","SJAG_00526","SJAG_03592","SJAG_02169","SJAG_03681","SJAG_00883","SJAG_01790"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[103298,86851,88939,89561,87832,103608,111951,95669,101091,89021,91747,97350,95749,106237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"down-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"downregulation of small GTPase mediated signal transduction","type":"exact"},{"name":"inhibition of small GTPase mediated signal transduction","type":"narrow"},{"name":"negative regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051058","terms_by_termid":{"GO:0031030":null,"GO:0046580":null}}


id: PBO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL26L1 antisense RNA 1","termid":"PBO:0071278"}


id: PBO:0081814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 7, Y-linked","termid":"PBO:0081814"}


id: PR:Q09861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29E6.07 gene.","definition_xrefs":["UniProtKB:Q09861","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29E6.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.07","synonyms":[{"name":"Spom972h-SPAC29E6.07","type":"exact"}],"termid":"PR:Q09861"}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["DeltaMass:0","PubMed:2989287","PubMed:6692818","ChEBI:30013","RESID:AA0017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: GO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"negatively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular wound healing","termid":"GO:0061044"}


id: PBO:0065940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor for activated C kinase 1","termid":"PBO:0065940"}


id: PATO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Spheroid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spheroid","secondary_identifiers":["PATO:0001864"],"synonyms":[{"name":"sphericality","type":"related"}],"termid":"PATO:0001865"}


id: PBO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSEL antisense RNA 1","termid":"PBO:0045495"}


id: PR:O42964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iws1 gene.","definition_xrefs":["UniProtKB:O42964","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor iws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.16","synonyms":[{"name":"Spom972h-iws1","type":"exact"}],"termid":"PR:O42964"}


id: PBO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha L","termid":"PBO:0048793"}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: PBO:0029537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002185)","termid":"PBO:0029537"}


id: PBO:0041683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon adenocarcinoma hypermethylated","termid":"PBO:0041683"}


id: PBO:0076158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 2","termid":"PBO:0076158"}


id: GO:0032306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin secretion","synonyms":[{"name":"regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032306"}


id: PBO:0081908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 875","termid":"PBO:0081908"}


id: PBO:0056023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 1","termid":"PBO:0056023"}


id: PATO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's relative position, shape, arrangements and connectivity of an organism's various parts; the pattern underlying its form.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure","secondary_identifiers":["PATO:0001452"],"synonyms":[{"name":"relational structural quality","type":"exact"}],"termid":"PATO:0000141"}


id: GO:1905746
data:
  {"annotated_genes":["SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114423],"is_not":false,"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2880558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA splicing, via spliceosome","termid":"GO:0048026"},{"relation_name":"is_a","term_name":"regulation of mRNA cis splicing, via spliceosome","termid":"GO:1905744"},{"relation_name":"positively_regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01040":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905746","terms_by_termid":{"GO:1905746":null}}


id: SO:1000015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of an adenine to a guanine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_G_transition","synonyms":[{"name":"A to G transition","type":"exact"}],"termid":"SO:1000015"}


id: PBO:0051020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFBP5 antisense RNA 1","termid":"PBO:0051020"}


id: PBO:0058558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6500","termid":"PBO:0058558"}


id: PBO:0081759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 689","termid":"PBO:0081759"}


id: PBO:0050563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 1","termid":"PBO:0050563"}


id: FYPO:0001367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis is normal (i.e. indistinguishable from wild type). Cytokinesis is part of the cell cycle and results in the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["GO:0000281","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cytokinesis","synonyms":[{"name":"normal cell cycle cytokinesis","type":"exact"},{"name":"normal cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cytokinesis during vegetative growth","type":"exact"},{"name":"normal mitotic cytokinesis","type":"exact"}],"termid":"FYPO:0001367"}


id: FYPO:0001824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to trifluoperazine. Cells stop growing (and may die) at a concentration of trifluoperazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to trifluoperazine","synonyms":[{"name":"hypersensitive to trifluoperazine","type":"exact"},{"name":"sensitive to trifluoperazine during mitotic cell cycle","type":"related"},{"name":"sensitive to trifluoperazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001824"}


id: PBO:0046187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2","termid":"PBO:0046187"}


id: PBO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 62","termid":"PBO:0042007"}


id: PR:O74965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03697","PANTHER:PTHR13227:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.04","secondary_identifiers":["UniProtKB:O74965"],"synonyms":[{"name":"Spom972h-EIF2A","type":"exact"},{"name":"eIF-2A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74965"}


id: PBO:0063725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphate synthase 1","termid":"PBO:0063725"}


id: PBO:0088847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2/EF3 lysine methyltransferase Efm2/Rgg1","termid":"PBO:0088847"}


id: FYECO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ubiquinone Q6 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ubiquinone Q6","synonyms":[{"name":"coenzyme Q6 added","type":"exact"}],"termid":"FYECO:0000131"}


id: PBO:0062369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 5","termid":"PBO:0062369"}


id: SO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaffold composed of mitochondrial contigs.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supercontig","termid":"SO:0000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_supercontig","synonyms":[{"name":"mitochondrial scaffold","type":"exact"},{"name":"mitochondrial supercontig","type":"exact"},{"name":"mitochondrial_scaffold","type":"exact"}],"termid":"SO:0001922"}


id: GO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"negatively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axonogenesis","synonyms":[{"name":"down regulation of axonogenesis","type":"exact"},{"name":"down-regulation of axonogenesis","type":"exact"},{"name":"downregulation of axonogenesis","type":"exact"},{"name":"inhibition of axonogenesis","type":"narrow"}],"termid":"GO:0050771"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["PMID:27268497","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016073"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: FYPO:0008094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites at which the protein Rpa2 accumulates is greater than normal during vegetative growth.","definition_xrefs":["PMID:37237082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rpa2 foci during vegetative growth","termid":"FYPO:0008094"}


id: PBO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein and VPS9 domains 1","termid":"PBO:0048370"}


id: GO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a blood vessel of the retina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"is_a","term_name":"retina vasculature morphogenesis in camera-type eye","termid":"GO:0061299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal blood vessel morphogenesis","termid":"GO:0061304"}


id: PBO:0016581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase gamma","termid":"PBO:0016581"}


id: PBO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein (predicted)","termid":"PBO:0016930"}


id: FYPO:0007298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is abnormal. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein aggregate center formation","synonyms":[{"name":"abnormal PAC formation","type":"exact"},{"name":"abnormal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abnormal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abnormal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007298"}


id: FYPO:0004581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is increased.","definition_xrefs":["PomBase:mah","GO:0007329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased transcriptional response to pheromone","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004581"}


id: GO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III and XRCC1, and is involved in base excision repair.","definition_xrefs":["PMID:15141024","PMID:7760816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA ligase III-XRCC1 complex","termid":"GO:0070421"}


id: PBO:0067423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 542, pseudogene","termid":"PBO:0067423"}


id: GO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The lowering of the number of nerve impulses from baroreceptors as a result of decreased stretch of an artery that results in an increased in sympathetic nerve impulses to peripheral blood vessels.","definition_xrefs":["GOC:mtg_cardio","ISBN:0323031951","ISBN:0721643949","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}


id: SO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 25S_rRNA, which functions as a component of the large subunit of the ribosome in some eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_25S_gene","synonyms":[{"name":"25S rRNA gene","type":"exact"},{"name":"25S_rRNA_gene","type":"exact"}],"termid":"SO:0002242"}


id: GO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of triacylglycerol, through sequential deacylation and re-acylation reactions, to generate triacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride acyl-chain remodeling","synonyms":[{"name":"triacylglycerol acyl-chain remodeling","type":"exact"},{"name":"triglyceride acyl-chain remodelling","type":"exact"}],"termid":"GO:0036153"}


id: PBO:0068565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 16, pseudogene","termid":"PBO:0068565"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: PBO:0073932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 5","termid":"PBO:0073932"}


id: PBO:0059006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMADHC pseudogene 2","termid":"PBO:0059006"}


id: PBO:0079788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A9","termid":"PBO:0079788"}


id: GO:1901317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["GOC:TermGenie","GOC:cilia","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement involved in cell motility","termid":"GO:0060295"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of flagellated sperm motility","synonyms":[{"name":"regulation of sperm motility","type":"broad"},{"name":"regulation of sperm movement","type":"broad"}],"termid":"GO:1901317"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: PBO:0042402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14A","termid":"PBO:0042402"}


id: PBO:0074357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 4","termid":"PBO:0074357"}


id: GO:1904133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in rhombomere morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in rhombomere morphogenesis","termid":"GO:1904125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in rhombomere morphogenesis","termid":"GO:1904133"}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GOC:PARL","GO_REF:0000079","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


id: PBO:0040098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 4 (inactive) (Dombrock blood group)","termid":"PBO:0040098"}


id: PBO:0057994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3918","termid":"PBO:0057994"}


id: GO:0003680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA structure formed by the minor groove of adenine-thymine-rich DNA regions. Examples of proteins having this function are AT-rich interaction domain (ARID)-containing proteins.","definition_xrefs":["PMID:15802641","PMID:10545119","GOC:jl","PMID:26223912","PMID:2670564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"minor groove of adenine-thymine-rich DNA binding","synonyms":[{"name":"AT DNA binding","type":"exact"},{"name":"AT binding","type":"exact"},{"name":"AT-rich DNA binding","type":"exact"}],"termid":"GO:0003680"}


id: PBO:0065762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridine nucleotide-disulphide oxidoreductase domain 2","termid":"PBO:0065762"}


id: FYPO:0009035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of formamide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to formamide","synonyms":[{"name":"resistance to formamide during mitotic cell cycle","type":"related"},{"name":"resistance to formamide during vegetative growth","type":"exact"},{"name":"resistant to formamide","type":"exact"}],"termid":"FYPO:0009035"}


id: FYPO:0001188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Calcofluor White. Cells stop growing (and may die) at a concentration of Calcofluor White that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to Calcofluor White","synonyms":[{"name":"hypersensitive to Calcofluor White","type":"exact"},{"name":"sensitive to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"sensitive to Calcofluor White during vegetative growth","type":"exact"}],"termid":"FYPO:0001188"}


id: MOD:00724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom on a nitrogen of an L-histidine residue with one methyl group.","definition_xrefs":["OMSSA:74","Unimod:34#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated L-histidine","synonyms":[{"name":"Methyl","type":"related"},{"name":"NMeHis","type":"exact"},{"name":"methylh","type":"exact"}],"termid":"MOD:00724"}


id: GO:0070380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high mobility group box 1 (HMBGB1) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:18431461","GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"high mobility group box 1 receptor activity","synonyms":[{"name":"HMGB1 receptor activity","type":"exact"}],"termid":"GO:0070380"}


id: PATO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000281 cytoplasmic sterility (obsolete PATO:0000281)","termid":"PATO:0000281"}


id: GO:0007495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"visceral mesoderm-endoderm interaction involved in midgut development","synonyms":[{"name":"visceral mesoderm/endoderm interaction","type":"exact"}],"termid":"GO:0007495"}


id: PBO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol kinase-related protein Tra2","termid":"PBO:0000244"}


id: FYPO:0000489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion distribution is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrion organization","termid":"FYPO:0000809"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrial distribution","synonyms":[{"name":"abnormal mitochondrial distribution during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial distribution during vegetative growth","type":"exact"},{"name":"mitochondrial distribution: abnormal","type":"related"}],"termid":"FYPO:0000489"}


id: GO:0000424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Degradation of a mitochondrion by microautophagy.","definition_xrefs":["PMID:15798367","PMID:27003723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006914","GO:0007005","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"micromitophagy","termid":"GO:0000424"}


id: PBO:0041938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 6","termid":"PBO:0041938"}


id: PBO:0038608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 4","termid":"PBO:0038608"}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: GO:1905271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GOC:als","PMID:21106936","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:1905271"}


id: SO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_modification","termid":"SO:0001221"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_modification","synonyms":[{"name":"gene silenced by histone modification","type":"exact"}],"termid":"SO:0001225"}


id: PBO:0089480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5","termid":"PBO:0089480"}


id: GO:1905690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a nucleus into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:autophagy","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus disassembly","synonyms":[{"name":"cell nucleus disassembly","type":"exact"}],"termid":"GO:1905690"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: PBO:0088365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin, nucleolar histone chaperone required for rRNA metabolism","termid":"PBO:0088365"}


id: GO:1905351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a pericyte cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:26268439","GOC:rph","GO_REF:0000091","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericyte cell migration","termid":"GO:1905351"}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102577,89517,94267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00635":null,"SJAG_00964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: PBO:0041690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin pseudogene","termid":"PBO:0041690"}


id: PBO:0063348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 2","termid":"PBO:0063348"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: FYPO:0003861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the pH of a growth medium in which a cell population grows to stationary phase decreases to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PMID:23874875","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal acidification of growth medium in stationary phase","termid":"FYPO:0003861"}


id: FYPO:0000486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiotic recombination","synonyms":[{"name":"delayed meiotic recombination","type":"exact"},{"name":"meiotic recombination: delayed","type":"related"}],"termid":"FYPO:0000486"}


id: PBO:0058043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4264","termid":"PBO:0058043"}


id: GO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core complex of a proteasome located in the cytosol of a cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex","termid":"GO:0005839"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"cytosolic proteasome core complex","termid":"GO:0031603"}


id: MOD:01736
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01736"}


id: PATO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located towards the central axis of the organism or an extremity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial to","termid":"PATO:0002036"}


id: PBO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD99 molecule (Xg blood group)","termid":"PBO:0042355"}


id: GO:0014804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the terminal cisterna envelope. This space is enriched in calsequestrin.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"terminal cisterna","termid":"GO:0014802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"terminal cisterna lumen","termid":"GO:0014804"}


id: PBO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5 (predicted)","termid":"PBO:0004217"}


id: PBO:0081692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 614","termid":"PBO:0081692"}


id: GO:1990234
data:
  {"annotated_genes":["SJAG_04232","SJAG_04933","SJAG_04451","SJAG_02667","SJAG_04097","SJAG_03599","SJAG_03436","SJAG_04879","SJAG_04520","SJAG_03680","SJAG_02186","SJAG_04890","SJAG_03145","SJAG_04793","SJAG_00512","SJAG_01610","SJAG_04881","SJAG_02374","SJAG_04877","SJAG_02044","SJAG_00262","SJAG_01069","SJAG_04559","SJAG_01022","SJAG_03525","SJAG_00159","SJAG_04035","SJAG_00656","SJAG_02385","SJAG_02627","SJAG_00735","SJAG_00816","SJAG_00320","SJAG_03037","SJAG_01392","SJAG_01657","SJAG_03579","SJAG_02726","SJAG_01006","SJAG_01658","SJAG_01826","SJAG_03206","SJAG_03789","SJAG_03351","SJAG_00421","SJAG_01213","SJAG_04180","SJAG_03036","SJAG_02699","SJAG_01857","SJAG_02653","SJAG_00783","SJAG_00641","SJAG_03015","SJAG_02665","SJAG_01436","SJAG_05297","SJAG_03628","SJAG_02818","SJAG_01385","SJAG_04106","SJAG_03761","SJAG_04335","SJAG_01475","SJAG_03454","SJAG_04182","SJAG_03130","SJAG_01009","SJAG_04815","SJAG_05197","SJAG_00213","SJAG_01587","SJAG_02785","SJAG_00756","SJAG_01562","SJAG_04095","SJAG_00153","SJAG_01276","SJAG_03841","SJAG_02685","SJAG_05017","SJAG_01151","SJAG_06635","SJAG_04087","SJAG_00638","SJAG_01799","SJAG_05236","SJAG_03811","SJAG_00552","SJAG_05348","SJAG_03695","SJAG_00554","SJAG_00184","SJAG_02163","SJAG_01876","SJAG_00880","SJAG_04151","SJAG_03587","SJAG_02703","SJAG_01480","SJAG_05329","SJAG_03356","SJAG_01401","SJAG_04882","SJAG_03181","SJAG_01134","SJAG_03215","SJAG_00831","SJAG_03333","SJAG_01016","SJAG_03575","SJAG_03230","SJAG_04932","SJAG_04550","SJAG_01207","SJAG_04631","SJAG_02101","SJAG_00150","SJAG_04612","SJAG_02768","SJAG_03218","SJAG_03385","SJAG_03561","SJAG_01472","SJAG_00676","SJAG_02172","SJAG_03728","SJAG_00378","SJAG_02804","SJAG_00100","SJAG_02275","SJAG_00458","SJAG_04205","SJAG_00095","SJAG_01823","SJAG_06309","SJAG_01710","SJAG_02927","SJAG_00341","SJAG_05978","SJAG_00605","SJAG_00146","SJAG_01801","SJAG_01274","SJAG_04502","SJAG_03699","SJAG_02319","SJAG_02990","SJAG_03810","SJAG_03956","SJAG_02070","SJAG_02920","SJAG_02162","SJAG_01698","SJAG_04119","SJAG_00119","SJAG_00619","SJAG_00182","SJAG_03752","SJAG_01427","SJAG_02170","SJAG_01332","SJAG_01678","SJAG_02706","SJAG_00545","SJAG_00814","SJAG_02063","SJAG_02183","SJAG_04408","SJAG_02441","SJAG_04654","SJAG_06449","SJAG_00116","SJAG_04368","SJAG_04917","SJAG_04994","SJAG_02066","SJAG_00758","SJAG_06383","SJAG_02591","SJAG_04420","SJAG_04140","SJAG_04859","SJAG_01573","SJAG_03345","SJAG_04971","SJAG_02583","SJAG_00187","SJAG_04853","SJAG_04661","SJAG_03014","SJAG_02658","SJAG_02629","SJAG_02197","SJAG_04131","SJAG_04384","SJAG_03035","SJAG_00295","SJAG_04568","SJAG_04030","SJAG_04312","SJAG_04274","SJAG_03193","SJAG_02305","SJAG_04848","SJAG_04280","SJAG_02041","SJAG_00439","SJAG_01128","SJAG_03219","SJAG_03289","SJAG_04894","SJAG_04619","SJAG_00114","SJAG_01646","SJAG_03160","SJAG_03302","SJAG_06425","SJAG_03144","SJAG_01051","SJAG_05323","SJAG_01540","SJAG_04977","SJAG_02822","SJAG_00033","SJAG_01453","SJAG_02908","SJAG_01956","SJAG_02222","SJAG_03468","SJAG_02506","SJAG_01253","SJAG_03668","SJAG_01325","SJAG_03421","SJAG_02165","SJAG_03578","SJAG_04934","SJAG_04355","SJAG_07011","SJAG_03858","SJAG_01572","SJAG_02299","SJAG_04179","SJAG_03591","SJAG_02837","SJAG_01886","SJAG_04178","SJAG_04613","SJAG_03115","SJAG_00192","SJAG_05219","SJAG_00584","SJAG_03431","SJAG_01637","SJAG_02600","SJAG_01948","SJAG_01349","SJAG_03501","SJAG_01709","SJAG_00293","SJAG_01581","SJAG_03417","SJAG_02289","SJAG_00615","SJAG_01776","SJAG_05979","SJAG_02458","SJAG_00666","SJAG_01585","SJAG_03802","SJAG_03931","SJAG_01313","SJAG_04181","SJAG_04680","SJAG_04574","SJAG_04161","SJAG_00087","SJAG_05239","SJAG_02404","SJAG_03555","SJAG_00769","SJAG_00731","SJAG_04486","SJAG_03061","SJAG_01617","SJAG_03602","SJAG_01068","SJAG_03949","SJAG_05274","SJAG_00995","SJAG_04614","SJAG_02119","SJAG_04860","SJAG_00142","SJAG_03651","SJAG_02329","SJAG_02637","SJAG_02386","SJAG_03776","SJAG_02913","SJAG_02863","SJAG_00910","SJAG_01533","SJAG_02725","SJAG_01765","SJAG_00139","SJAG_00819","SJAG_01236","SJAG_00872","SJAG_03350","SJAG_00129","SJAG_04201","SJAG_04090","SJAG_03967","SJAG_03985","SJAG_00411","SJAG_05282","SJAG_03921","SJAG_03809","SJAG_04127","SJAG_00435","SJAG_04540","SJAG_05012","SJAG_03118","SJAG_01716","SJAG_00637","SJAG_03285","SJAG_03801","SJAG_04923","SJAG_04434","SJAG_01862","SJAG_01149","SJAG_03045","SJAG_03403","SJAG_02174","SJAG_04552","SJAG_04970","SJAG_00894","SJAG_02871","SJAG_04261","SJAG_02773","SJAG_01865","SJAG_02541","SJAG_00901","SJAG_00896","SJAG_03702","SJAG_03618","SJAG_03107","SJAG_04852","SJAG_00651","SJAG_02903","SJAG_03006","SJAG_00506","SJAG_02545","SJAG_01288","SJAG_02360","SJAG_01444","SJAG_04309","SJAG_00611","SJAG_03066","SJAG_03792","SJAG_00071","SJAG_02057","SJAG_02753","SJAG_00973","SJAG_04770","SJAG_02651","SJAG_04573","SJAG_06560","SJAG_03029","SJAG_03048","SJAG_05285","SJAG_01713","SJAG_01456","SJAG_01531","SJAG_01711","SJAG_03900","SJAG_01245","SJAG_00741","SJAG_01389","SJAG_00349","SJAG_01808","SJAG_04142"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102149,87689,98711,90562,111851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000148"},{"annotations":[100529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005945"},{"annotations":[99371,109310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005948"},{"annotations":[101379,95493,113359,93521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[93240,97133,87949,73390,89439,92619,107564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005946"},{"annotations":[102235,96869,91264,78735,63068,96205,87848,103665,92698,89851,97908,79151,86469,109184,95685,108273,98366,95680,78023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[93968,90908,83990,96047,113825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[86207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034274"},{"annotations":[91822,97469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005953"},{"annotations":[97917,96512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[101418,107534,99134,95231,91311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[94523,95079,99562,112049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110115"},{"annotations":[113709,110045,106543,114813,92823,90446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[91905,106972,113030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[90620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031463"},{"annotations":[87030,84516,101394,92781,86981,107317,92824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080008"},{"annotations":[107205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"},{"annotations":[93589,78301,95454,107270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035361"},{"annotations":[85383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031461"},{"annotations":[113102,87838,98426,97692,102314,102407,100396,104416,107243,101744,84372,101063,102020,105095,104934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[113299,108087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[93874,104078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904423"},{"annotations":[91334,100983,98904,105171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043625"},{"annotations":[92518,99848,102777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033185"},{"annotations":[108869,93923,88735,85130,104067,112440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044695"},{"annotations":[94378,95538,97212,100217,112366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000408"},{"annotations":[106213,93132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[109623,111445,103406,106005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008622"},{"annotations":[92577,92313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[112405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005760"},{"annotations":[84454,97945,103933,92704,93497,110305,91177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034657"},{"annotations":[112185,99120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[87333,85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[89087,89178,113263,105991,104647,107656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[109204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[109806,87928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032478"},{"annotations":[84583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[103742,85392,100042,100874,101350,105633,113181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[89486,114844,112260,87343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033503"},{"annotations":[91242,93598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070916"},{"annotations":[99184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990221"},{"annotations":[87793,114562,91055,100187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[108754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000136"},{"annotations":[101002,93984,114057,83660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140497"},{"annotations":[91234,83571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[86876,95752,100498,101362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[104818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990304"},{"annotations":[106481,85531,112836,114000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[98640,111388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[99658,101541,108845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[101363,90055,103987,102569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[111635,109206,105127,114572,102936,100110,93326,97764,100775,90110,97047,90403,86815,108295,88474,95044,95753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[91906,106975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[113992,95638,111462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"},{"annotations":[90449,106382,100921,86727,105144,93869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[85349,112190,114228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031588"},{"annotations":[96103,95725,113341,97426,91425,98644,112888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[104937,105097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[106053,83891,103355,109618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070772"},{"annotations":[107573,93683,88721,90726,98207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[101765,98208,88722,93684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"},{"annotations":[97471,86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005965"},{"annotations":[114283,91356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009365"},{"annotations":[104466,87293,89838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[85656,99600,111001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005968"},{"annotations":[101011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097505"},{"annotations":[106439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009349"},{"annotations":[111006,105984,93809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002189"},{"annotations":[105844,91846,106746,99415,111563,88130,85686,110270,101842,90004,98756,86508,109859,100934,83838,83837,109199,98612,109573,109572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[105336,109860,90005,110715,97852,99416,92910,101843,103761,108903,90194,88131,97080],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[90006,97081,90195,92911,88132,97853,105337,99417,103762,109861,110716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016591"},{"annotations":[111711,112809,104502,108437,109862,99418,107530,98757,90007,94250,101844,85687,112502,97580,88133,89114,97619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[111464,113994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031379"},{"annotations":[99444,112332,103392,102961,103750,87513,84499,109033,85416,113631,111427,93918,113583,107807,94597,84646,101823,108606,110358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[86728,84718,111842,94549,93870,98948,101066,91646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019005"},{"annotations":[112584,90282,105413,111745,86833,99196,101683,113562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[62466,69913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"},{"annotations":[85885,84201,113267,113880,102357,113607,85194,107542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030915"},{"annotations":[102042,89653,88881,93003,98234,101595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035339"},{"annotations":[87637,92786,106027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033768"},{"annotations":[103994,103995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000333"},{"annotations":[103746,113369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[84500,91682,85417,92898,113584,102962,83544,110284,110847,90246,92134,96298,84758,99695,111428,89609],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[93710,111119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[89610,98374,111027],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[110880,86021,105045,86387,88273,99231,102098,104545,111185],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[108140,102099,109026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"},{"annotations":[108208,97044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[100212,92315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[111754,114989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"},{"annotations":[101041,109042,103290,112798,101949,88795,108376,84738,97546,112891,85475,92615,103271,98187,107092,111685,95714,100649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000151"},{"annotations":[95387,98956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016035"}]},"cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor).","definition_xrefs":["PMID:16540464","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":384,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00071":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00100":null,"SJAG_00114":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00129":null,"SJAG_00139":null,"SJAG_00142":null,"SJAG_00146":null,"SJAG_00150":null,"SJAG_00153":null,"SJAG_00159":null,"SJAG_00182":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00192":null,"SJAG_00213":null,"SJAG_00262":null,"SJAG_00293":null,"SJAG_00295":null,"SJAG_00320":null,"SJAG_00341":null,"SJAG_00349":null,"SJAG_00378":null,"SJAG_00411":null,"SJAG_00421":null,"SJAG_00435":null,"SJAG_00439":null,"SJAG_00458":null,"SJAG_00506":null,"SJAG_00512":null,"SJAG_00545":null,"SJAG_00552":null,"SJAG_00554":null,"SJAG_00584":null,"SJAG_00605":null,"SJAG_00611":null,"SJAG_00615":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00638":null,"SJAG_00641":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_00666":null,"SJAG_00676":null,"SJAG_00731":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00756":null,"SJAG_00758":null,"SJAG_00769":null,"SJAG_00783":null,"SJAG_00814":null,"SJAG_00816":null,"SJAG_00819":null,"SJAG_00831":null,"SJAG_00872":null,"SJAG_00880":null,"SJAG_00894":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00910":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01006":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01022":null,"SJAG_01051":null,"SJAG_01068":null,"SJAG_01069":null,"SJAG_01128":null,"SJAG_01134":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01236":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01274":null,"SJAG_01276":null,"SJAG_01288":null,"SJAG_01313":null,"SJAG_01325":null,"SJAG_01332":null,"SJAG_01349":null,"SJAG_01385":null,"SJAG_01389":null,"SJAG_01392":null,"SJAG_01401":null,"SJAG_01427":null,"SJAG_01436":null,"SJAG_01444":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01472":null,"SJAG_01475":null,"SJAG_01480":null,"SJAG_01531":null,"SJAG_01533":null,"SJAG_01540":null,"SJAG_01562":null,"SJAG_01572":null,"SJAG_01573":null,"SJAG_01581":null,"SJAG_01585":null,"SJAG_01587":null,"SJAG_01610":null,"SJAG_01617":null,"SJAG_01637":null,"SJAG_01646":null,"SJAG_01657":null,"SJAG_01658":null,"SJAG_01678":null,"SJAG_01698":null,"SJAG_01709":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01716":null,"SJAG_01765":null,"SJAG_01776":null,"SJAG_01799":null,"SJAG_01801":null,"SJAG_01808":null,"SJAG_01823":null,"SJAG_01826":null,"SJAG_01857":null,"SJAG_01862":null,"SJAG_01865":null,"SJAG_01876":null,"SJAG_01886":null,"SJAG_01948":null,"SJAG_01956":null,"SJAG_02041":null,"SJAG_02044":null,"SJAG_02057":null,"SJAG_02063":null,"SJAG_02066":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02163":null,"SJAG_02165":null,"SJAG_02170":null,"SJAG_02172":null,"SJAG_02174":null,"SJAG_02183":null,"SJAG_02186":null,"SJAG_02197":null,"SJAG_02222":null,"SJAG_02275":null,"SJAG_02289":null,"SJAG_02299":null,"SJAG_02305":null,"SJAG_02319":null,"SJAG_02329":null,"SJAG_02360":null,"SJAG_02374":null,"SJAG_02385":null,"SJAG_02386":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02545":null,"SJAG_02583":null,"SJAG_02591":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02629":null,"SJAG_02637":null,"SJAG_02651":null,"SJAG_02653":null,"SJAG_02658":null,"SJAG_02665":null,"SJAG_02667":null,"SJAG_02685":null,"SJAG_02699":null,"SJAG_02703":null,"SJAG_02706":null,"SJAG_02725":null,"SJAG_02726":null,"SJAG_02753":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02804":null,"SJAG_02818":null,"SJAG_02822":null,"SJAG_02837":null,"SJAG_02863":null,"SJAG_02871":null,"SJAG_02903":null,"SJAG_02908":null,"SJAG_02913":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03006":null,"SJAG_03014":null,"SJAG_03015":null,"SJAG_03029":null,"SJAG_03035":null,"SJAG_03036":null,"SJAG_03037":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03066":null,"SJAG_03107":null,"SJAG_03115":null,"SJAG_03118":null,"SJAG_03130":null,"SJAG_03144":null,"SJAG_03145":null,"SJAG_03160":null,"SJAG_03181":null,"SJAG_03193":null,"SJAG_03206":null,"SJAG_03215":null,"SJAG_03218":null,"SJAG_03219":null,"SJAG_03230":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03302":null,"SJAG_03333":null,"SJAG_03345":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03356":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03417":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03436":null,"SJAG_03454":null,"SJAG_03468":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03555":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03578":null,"SJAG_03579":null,"SJAG_03587":null,"SJAG_03591":null,"SJAG_03599":null,"SJAG_03602":null,"SJAG_03618":null,"SJAG_03628":null,"SJAG_03651":null,"SJAG_03668":null,"SJAG_03680":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03702":null,"SJAG_03728":null,"SJAG_03752":null,"SJAG_03761":null,"SJAG_03776":null,"SJAG_03789":null,"SJAG_03792":null,"SJAG_03801":null,"SJAG_03802":null,"SJAG_03809":null,"SJAG_03810":null,"SJAG_03811":null,"SJAG_03841":null,"SJAG_03858":null,"SJAG_03900":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_03949":null,"SJAG_03956":null,"SJAG_03967":null,"SJAG_03985":null,"SJAG_04030":null,"SJAG_04035":null,"SJAG_04087":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04097":null,"SJAG_04106":null,"SJAG_04119":null,"SJAG_04127":null,"SJAG_04131":null,"SJAG_04140":null,"SJAG_04142":null,"SJAG_04151":null,"SJAG_04161":null,"SJAG_04178":null,"SJAG_04179":null,"SJAG_04180":null,"SJAG_04181":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04205":null,"SJAG_04232":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04280":null,"SJAG_04309":null,"SJAG_04312":null,"SJAG_04335":null,"SJAG_04355":null,"SJAG_04368":null,"SJAG_04384":null,"SJAG_04408":null,"SJAG_04420":null,"SJAG_04434":null,"SJAG_04451":null,"SJAG_04486":null,"SJAG_04502":null,"SJAG_04520":null,"SJAG_04540":null,"SJAG_04550":null,"SJAG_04552":null,"SJAG_04559":null,"SJAG_04568":null,"SJAG_04573":null,"SJAG_04574":null,"SJAG_04612":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04619":null,"SJAG_04631":null,"SJAG_04654":null,"SJAG_04661":null,"SJAG_04680":null,"SJAG_04770":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_04848":null,"SJAG_04852":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04860":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04881":null,"SJAG_04882":null,"SJAG_04890":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04923":null,"SJAG_04932":null,"SJAG_04933":null,"SJAG_04934":null,"SJAG_04970":null,"SJAG_04971":null,"SJAG_04977":null,"SJAG_04994":null,"SJAG_05012":null,"SJAG_05017":null,"SJAG_05197":null,"SJAG_05219":null,"SJAG_05236":null,"SJAG_05239":null,"SJAG_05274":null,"SJAG_05282":null,"SJAG_05285":null,"SJAG_05297":null,"SJAG_05323":null,"SJAG_05329":null,"SJAG_05348":null,"SJAG_05978":null,"SJAG_05979":null,"SJAG_06309":null,"SJAG_06383":null,"SJAG_06425":null,"SJAG_06449":null,"SJAG_06560":null,"SJAG_06635":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:1990234","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0000136":null,"GO:0000148":null,"GO:0000151":null,"GO:0000307":null,"GO:0000333":null,"GO:0000408":null,"GO:0000506":null,"GO:0000836":null,"GO:0002189":null,"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005680":null,"GO:0005736":null,"GO:0005760":null,"GO:0005945":null,"GO:0005946":null,"GO:0005948":null,"GO:0005952":null,"GO:0005953":null,"GO:0005956":null,"GO:0005965":null,"GO:0005968":null,"GO:0008250":null,"GO:0008622":null,"GO:0009349":null,"GO:0009365":null,"GO:0016035":null,"GO:0016591":null,"GO:0016593":null,"GO:0019005":null,"GO:0019908":null,"GO:0030915":null,"GO:0031211":null,"GO:0031379":null,"GO:0031380":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0031431":null,"GO:0031461":null,"GO:0031463":null,"GO:0031464":null,"GO:0031515":null,"GO:0031588":null,"GO:0032478":null,"GO:0033100":null,"GO:0033185":null,"GO:0033503":null,"GO:0033768":null,"GO:0034245":null,"GO:0034271":null,"GO:0034272":null,"GO:0034274":null,"GO:0034657":null,"GO:0035267":null,"GO:0035339":null,"GO:0035361":null,"GO:0035657":null,"GO:0036410":null,"GO:0043189":null,"GO:0043224":null,"GO:0043494":null,"GO:0043528":null,"GO:0043625":null,"GO:0044695":null,"GO:0046695":null,"GO:0048188":null,"GO:0070691":null,"GO:0070692":null,"GO:0070772":null,"GO:0070916":null,"GO:0070985":null,"GO:0080008":null,"GO:0090730":null,"GO:0097505":null,"GO:0106143":null,"GO:0110115":null,"GO:0120097":null,"GO:0140497":null,"GO:1904423":null,"GO:1990221":null,"GO:1990304":null,"GO:1990316":null,"GO:1990467":null,"GO:1990529":null}}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: GO:1901312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901312)","synonyms":[{"name":"down regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down regulation of extracellular matrix protein production","type":"related"},{"name":"down regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"down-regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"down-regulation of extracellular matrix protein production","type":"related"},{"name":"down-regulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"downregulation of expression of extracellular matrix proteins","type":"exact"},{"name":"downregulation of extracellular matrix protein production","type":"related"},{"name":"downregulation of gene expression involved in extracellular matrix organization","type":"exact"},{"name":"inhibition of expression of extracellular matrix proteins","type":"exact"},{"name":"inhibition of extracellular matrix protein production","type":"related"},{"name":"inhibition of gene expression involved in extracellular matrix organization","type":"narrow"},{"name":"negative regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"negative regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901312"}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: PBO:0052225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 3","termid":"PBO:0052225"}


id: GO:1903701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a substantia propria of cornea over time, from its formation to the mature structure.","definition_xrefs":["PMID:12556382","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia propria of cornea development","synonyms":[{"name":"corneal stroma development","type":"exact"},{"name":"stroma of cornea development","type":"exact"},{"name":"substantia propria development","type":"related"}],"termid":"GO:1903701"}


id: PR:Q9P3B1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GTPase-activating protein C1565.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.02c","synonyms":[{"name":"Spom972h-SPAC1565.02c","type":"exact"}],"termid":"PR:Q9P3B1"}


id: GO:0035292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of trunk segments, following establishment of segment boundaries. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"part_of","term_name":"trunk segmentation","termid":"GO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, trunk","termid":"GO:0035292"}


id: PBO:0072850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A","termid":"PBO:0072850"}


id: PBO:0074359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 5","termid":"PBO:0074359"}


id: GO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"}


id: GO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to leptin","termid":"GO:0044321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptin stimulus","termid":"GO:0044320"}


id: PBO:0000563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase, poly(A)-specific ribonuclease complex subunit Pan2 (predicted)","termid":"PBO:0000563"}


id: FYPO:0008113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which introns are retained at some, but not all introns at a higher level with increased frequency. Weak donor sequences are more affected.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mRNA splicing, via spliceosome, intron-specific","termid":"FYPO:0003244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"increased intron retention","termid":"FYPO:0008113"}


id: PBO:0076625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCEL-TECTA readthrough","termid":"PBO:0076625"}


id: GO:0010548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thylakoid membrane disassembly.","definition_xrefs":["PMID:17416733","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane disassembly","termid":"GO:0010549"},{"relation_name":"regulates","term_name":"thylakoid membrane disassembly","termid":"GO:0010547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of thylakoid membrane disassembly","synonyms":[{"name":"regulation of thylakoid membrane degradation","type":"exact"}],"termid":"GO:0010548"}


id: PBO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 29","termid":"PBO:0070356"}


id: PBO:0068060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 365","termid":"PBO:0068060"}


id: PBO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 24 (pseudogene)","termid":"PBO:0045613"}


id: PBO:0045563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 12","termid":"PBO:0045563"}


id: GO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle maturation","termid":"GO:0048817"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"negatively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of timing of catagen","synonyms":[{"name":"down regulation of catagen","type":"related"},{"name":"down-regulation of catagen","type":"related"},{"name":"downregulation of catagen","type":"related"},{"name":"inhibition of catagen","type":"narrow"},{"name":"negative regulation of catagen","type":"related"}],"termid":"GO:0051796"}


id: PR:Q9UU93
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcineurin subunit B type 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.06","secondary_identifiers":["UniProtKB:Q9UU93"],"synonyms":[{"name":"Spom972h-PPP3R1","type":"exact"},{"name":"calcineurin regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein phosphatase 2B regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU93"}


id: PBO:0064862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 17","termid":"PBO:0064862"}


id: PBO:0075020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-31","termid":"PBO:0075020"}


id: PBO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25 (predicted)","termid":"PBO:0005844"}


id: GO:1904631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucoside stimulus.","definition_xrefs":["PMID:16842873","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucoside","synonyms":[{"name":"response to glucosides","type":"exact"}],"termid":"GO:1904631"}


id: GO:0042403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid hormone metabolic process","synonyms":[{"name":"thyroid hormone metabolism","type":"exact"}],"termid":"GO:0042403"}


id: FYPO:0006066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more alpha/beta tubulin heterodimers does not occur. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"abolished tubulin heterodimer binding","synonyms":[{"name":"abolished protein-protein interaction with tubulin dimer","type":"exact"},{"name":"abolished protein-protein interaction with tubulin heterodimer","type":"exact"},{"name":"abolished tubulin dimer binding","type":"exact"},{"name":"tubulin heterodimer binding abolished","type":"exact"}],"termid":"FYPO:0006066"}


id: GO:0010737
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97929],"is_not":false,"summary":null,"term":"GO:0010737"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of protein kinase A (PKA), and ends with the regulation of a downstream cellular process, e.g. transcription. The PKA catalytic subunit (PKA-C) is normally present in a complex with its regulatory subunit, PKA-R. The inhibitory action of PKA-R is released upon cAMP binding, which results in the activation of PKA-C.","definition_xrefs":["PMID:36431013","PMID:35252178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase A signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PKA signaling cascade","type":"related"},{"name":"protein kinase A signal transduction","type":"exact"},{"name":"protein kinase A signaling cascade","type":"related"},{"name":"protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010737","terms_by_termid":{"GO:0010737":null}}


id: PBO:0027003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_sporulation","termid":"PBO:0027003"}


id: GO:1990406
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane, G protein-coupled signaling receptor complex recognized by calcitonin gene-related peptides (CGRP).","definition_xrefs":["GOC:bhm","PMID:20826335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"CGRP receptor complex","synonyms":[{"name":"CGRP-R complex","type":"exact"},{"name":"Calcitonin-gene-related peptide receptor complex","type":"exact"},{"name":"calcitonin gene-related polypeptide receptor complex","type":"exact"}],"termid":"GO:1990406"}


id: PBO:0068696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 77, pseudogene","termid":"PBO:0068696"}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: PBO:0066749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 47","termid":"PBO:0066749"}


id: PBO:0078299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-4","termid":"PBO:0078299"}


id: GO:0009722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cytokinin stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to cytokinin","termid":"GO:0009735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cytokinin stimulus","synonyms":[{"name":"perception of cytokinin stimulus","type":"related"}],"termid":"GO:0009722"}


id: GO:1903197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:16731528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-dopa biosynthetic process","termid":"GO:1903195"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-dopa biosynthetic process","synonyms":[{"name":"activation of L-dopa anabolism","type":"narrow"},{"name":"activation of L-dopa biosynthesis","type":"narrow"},{"name":"activation of L-dopa biosynthetic process","type":"narrow"},{"name":"activation of L-dopa formation","type":"narrow"},{"name":"activation of L-dopa synthesis","type":"narrow"},{"name":"positive regulation of L-dopa anabolism","type":"exact"},{"name":"positive regulation of L-dopa biosynthesis","type":"exact"},{"name":"positive regulation of L-dopa formation","type":"exact"},{"name":"positive regulation of L-dopa synthesis","type":"exact"},{"name":"up regulation of L-dopa anabolism","type":"exact"},{"name":"up regulation of L-dopa biosynthesis","type":"exact"},{"name":"up regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up regulation of L-dopa formation","type":"exact"},{"name":"up regulation of L-dopa synthesis","type":"exact"},{"name":"up-regulation of L-dopa anabolism","type":"exact"},{"name":"up-regulation of L-dopa biosynthesis","type":"exact"},{"name":"up-regulation of L-dopa biosynthetic process","type":"exact"},{"name":"up-regulation of L-dopa formation","type":"exact"},{"name":"up-regulation of L-dopa synthesis","type":"exact"},{"name":"upregulation of L-dopa anabolism","type":"exact"},{"name":"upregulation of L-dopa biosynthesis","type":"exact"},{"name":"upregulation of L-dopa biosynthetic process","type":"exact"},{"name":"upregulation of L-dopa formation","type":"exact"},{"name":"upregulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903197"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: PBO:0067294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 379, pseudogene","termid":"PBO:0067294"}


id: PBO:0109992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF181 like, unknown biological role","termid":"PBO:0109992"}


id: FYPO:0002331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0005225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K4 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H3-K4 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H3K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K4me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002331"}


id: FYPO:0003617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin D. Cells stop growing (and may die) at a concentration of cytochalasin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cytochalasin D","synonyms":[{"name":"hypersensitive to cytochalasin D","type":"exact"},{"name":"sensitive to cytochalasin D during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin D during vegetative growth","type":"exact"}],"termid":"FYPO:0003617"}


id: PBO:0062068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily B member 1 pseudogene","termid":"PBO:0062068"}


id: GO:0006667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine, D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["PMID:29165427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine metabolic process","synonyms":[{"name":"dihydrosphingosine metabolic process","type":"exact"},{"name":"dihydrosphingosine metabolism","type":"exact"},{"name":"sphinganine metabolism","type":"exact"}],"termid":"GO:0006667"}


id: PBO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor (predicted)","termid":"PBO:0018210"}


id: PBO:0065994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 14","termid":"PBO:0065994"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: PBO:0054890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2304","termid":"PBO:0054890"}


id: PBO:0068592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 43, pseudogene","termid":"PBO:0068592"}


id: GO:2000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oxygen metabolic process","synonyms":[{"name":"regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000374"}


id: GO:0018988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The periodic shedding of part or all of a protein-based cuticle, which is then replaced by a new protein-based cuticle. A cuticle is the outer layer of an animal which acts to prevent water loss.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete molting cycle, protein-based cuticle (obsolete GO:0018988)","synonyms":[{"name":"protein-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018988"}


id: FYECO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tacrolimus was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tacrolimus","secondary_identifiers":["FYECO:0000029"],"synonyms":[{"name":"FK506 added","type":"exact"},{"name":"tacrolimus added","type":"exact"}],"termid":"FYECO:0000160"}


id: PBO:0084018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral ER membrane protein of unknown function; forms an ER-membrane associated protein complex with Emp65p; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins; required for nuclear envelope localization of Mps3p","termid":"PBO:0084018"}


id: GO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the imaginal disc. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that rapidly develop into adult appendages during metamorphosis from larval to adult form.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}


id: GO:0070906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aspartate(out) + alanine(in) = aspartate(in) + alanine(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"aspartate:alanine antiporter activity","secondary_identifiers":["RHEA:33139"],"synonyms":[{"name":"aspartate-alanine antiporter activity","type":"exact"},{"name":"aspartate/alanine antiporter activity","type":"exact"}],"termid":"GO:0070906"}


id: FYPO:0005591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylcholine level","synonyms":[{"name":"decreased cellular lysophosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lysophosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylcholine level","type":"exact"}],"termid":"FYPO:0005591"}


id: GO:0034254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of urea.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"is_a","term_name":"regulation of urea metabolic process","termid":"GO:0034255"},{"relation_name":"regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of urea catabolic process","synonyms":[{"name":"regulation of urea breakdown","type":"exact"},{"name":"regulation of urea catabolism","type":"exact"},{"name":"regulation of urea degradation","type":"exact"}],"termid":"GO:0034254"}


id: GO:0015522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hydrophobic uncoupler(in) + H+(out) = hydrophobic uncoupler(out) + H+(in). Hydrophobic uncouplers include CCCP, benzalkonium and SDS.","definition_xrefs":["TC:2.A.1.2.9"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrophobic uncoupler:proton antiporter activity (obsolete GO:0015522)","synonyms":[{"name":"hydrophobic uncoupler:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015522"}


id: GO:0004549
data:
  {"annotated_genes":["SJAG_04582","SJAG_00306","SJAG_03796","SJAG_03234","SJAG_03328","SJAG_00754","SJAG_04916","SJAG_01623","SJAG_00955","SJAG_06613","SJAG_04907","SJAG_02553","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92892,90812,114606,111357,98135,100619,95576,109554,100837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[97415,96878,101982,113701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in tRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01260":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140098","GO:0016788","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5696813","Reactome:R-HSA-6785722","Reactome:R-HSA-6786854","Reactome:R-HSA-5696815"],"synonyms":[{"name":"tRNA-specific RNase activity","type":"exact"}],"termid":"GO:0004549","terms_by_termid":{"GO:0000213":null,"GO:0004526":null}}


id: PBO:0065299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 3","termid":"PBO:0065299"}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: PBO:0087334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific assembly chaperone for ribosomal protein Rpl10p; co-translationally associates with nascent Rpl10p, preventing aggregation; involved in biogenesis of the ribosomal large subunit; contains multiple WD repeats; interacts genetically and physically with Qsr1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087334"}


id: PBO:0076443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 2","termid":"PBO:0076443"}


id: PBO:0015685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial processing peptidase (MPP) complex beta subunit Qcr1 and respiratory chain complex III subunit (predicted)","termid":"PBO:0015685"}


id: PBO:0040189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 2","termid":"PBO:0040189"}


id: MOD:00990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00990"}


id: GO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM2.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM2 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM2 complex","type":"narrow"}],"termid":"GO:0071053"}


id: GO:2001242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptosis","type":"narrow"},{"name":"regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001242"}


id: GO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-carbamoyl-L-serine + H2O + H+ = CO2 + 2 NH4 + pyruvate.","definition_xrefs":["RHEA:15445","EC:4.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbamoyl-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:CARBAMOYL-SERINE-AMMONIA-LYASE-RXN","KEGG_REACTION:R00213"],"synonyms":[{"name":"O-carbamoyl-L-serine ammonia-lyase (decarboxylating; pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"O-carbamoyl-L-serine deaminase activity","type":"related"},{"name":"carbamoylserine deaminase activity","type":"related"}],"termid":"GO:0047766"}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: GO:0044743
data:
  {"annotated_genes":["SJAG_00196","SJAG_01560","SJAG_01597","SJAG_05315","SJAG_03560","SJAG_02077","SJAG_00564","SJAG_01165","SJAG_03324","SJAG_03358","SJAG_00373","SJAG_03515","SJAG_02917","SJAG_02693","SJAG_00326","SJAG_04996","SJAG_03502","SJAG_01684","SJAG_04014","SJAG_01854","SJAG_04336","SJAG_01615","SJAG_04432","SJAG_05259","SJAG_02034","SJAG_02997","SJAG_00891","SJAG_01879","SJAG_03415","SJAG_01120","SJAG_00702","SJAG_02797","SJAG_04218","SJAG_01442","SJAG_03440","SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84491,105830,94586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045041"},{"annotations":[98771,95326,92985,96395,90618,112826,95511,95621,102233,103575,111279,85669,84492,99362,101240,103635,87017,105943,103658,113275,107859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030150"},{"annotations":[107447,62837,92570,106111,86356,101294,94330,86559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[93058,107911,99173],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[97381,113335],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The directed movement of proteins into an intracellular organelle, across a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00326":null,"SJAG_00373":null,"SJAG_00564":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01120":null,"SJAG_01165":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01854":null,"SJAG_01879":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02917":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03440":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein transmembrane import into intracellular organelle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0044743","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0045041":null}}


id: PBO:0042235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 7 (pseudogene)","termid":"PBO:0042235"}


id: GO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is a part of a hybrid type promoter that controls transcription by RNA polymerase III (Pol III). A hybrid Pol III promoter contains both regulatory elements both upstream and downstream of the transcription initiation site. An example gene with such a promoter is the S. cerevisiae U6 gene.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","termid":"GO:0000992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0000976","GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III hybrid type promoter sequence-specific DNA binding","secondary_identifiers":["GO:0001037"],"synonyms":[{"name":"RNA polymerase III hybrid type promoter DNA binding","type":"related"}],"termid":"GO:0001039"}


id: PBO:0059219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 2A","termid":"PBO:0059219"}


id: GO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PMID:11592901","RESID:AA0326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tetrakis-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tetrakis-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0045459"}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


id: PBO:0057071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 151b","termid":"PBO:0057071"}


id: PBO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cellular_process","termid":"PBO:0034525"}


id: PBO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_microtubules","termid":"PBO:0031375"}


id: PBO:0055702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 1","termid":"PBO:0055702"}


id: GO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"translational initiation","termid":"GO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"formation of translation initiation ternary complex","synonyms":[{"name":"translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:0001677"}


