# terms

id: PBO:0065282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 2","termid":"PBO:0065282"}


id: GO:1990521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and increases the activity of m7G(5')pppN diphosphatase.","definition_xrefs":["PMID:22323607"],"gene_count":0,"genotype_count":0,"name":"obsolete m7G(5')pppN diphosphatase activator activity (obsolete GO:1990521)","termid":"GO:1990521"}


id: GO:0002069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell to attain its fully functional state. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"}


id: PBO:0050054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, U (pseudogene)","termid":"PBO:0050054"}


id: PBO:0085622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in energy metabolism under respiratory conditions; abundance is increased upon intracellular iron depletion or in response to DNA replication stress; suppresses pro-apoptotic effect of expressing human BAX in yeast cells; RGI1 has a paralog, RGI2, that arose from the whole genome duplication","termid":"PBO:0085622"}


id: PBO:0064079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 113","termid":"PBO:0064079"}


id: PBO:0045941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B1","termid":"PBO:0045941"}


id: PBO:0088709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1","termid":"PBO:0088709"}


id: PBO:0057915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3618","termid":"PBO:0057915"}


id: PR:O36015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA methyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.03c","secondary_identifiers":["UniProtKB:O36015"],"synonyms":[{"name":"2'-O-ribose RNA methyltransferase TRM7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FTSJ1","type":"exact"}],"termid":"PR:O36015"}


id: FYPO:0001071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal transport","synonyms":[{"name":"normal transport during mitotic cell cycle","type":"related"},{"name":"normal transport during vegetative growth","type":"exact"}],"termid":"FYPO:0001071"}


id: GO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell fate commitment","termid":"GO:0072151"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"}


id: PBO:0042589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 2","termid":"PBO:0042589"}


id: PBO:0041560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 67","termid":"PBO:0041560"}


id: GO:0004550
data:
  {"annotated_genes":["SJAG_04657","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96152,114040],"is_not":false,"summary":null,"term":"GO:0004550"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.","definition_xrefs":["EC:2.7.4.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02887":null,"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"nucleoside diphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6806877","Reactome:R-HSA-482621","Reactome:R-HSA-482804","Reactome:R-HSA-482619","Reactome:R-HSA-9748999","Reactome:R-HSA-482812","Reactome:R-HSA-9755013","Reactome:R-HSA-9748969","Reactome:R-HSA-2162096","MetaCyc:NUCLEOSIDE-DIP-KIN-RXN"],"synonyms":[{"name":"ATP:nucleoside-diphosphate phosphotransferase activity","type":"related"},{"name":"NDK activity","type":"related"},{"name":"UDP kinase activity","type":"related"},{"name":"nucleoside 5'-diphosphate kinase activity","type":"related"},{"name":"nucleoside 5'-diphosphate phosphotransferase activity","type":"related"},{"name":"nucleoside diphosphate (UDP) kinase activity","type":"related"},{"name":"nucleoside diphosphokinase activity","type":"related"},{"name":"nucleoside-diphosphate kinase activity","type":"exact"},{"name":"nucleotide phosphate kinase activity","type":"related"},{"name":"uridine diphosphate kinase activity","type":"related"}],"termid":"GO:0004550","terms_by_termid":{"GO:0004550":null}}


id: GO:1900516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"negatively_regulates","term_name":"xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"negative regulation of xylose catabolic process to ethanol","synonyms":[{"name":"down regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down regulation of xylose catabolism to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"down-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"downregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"downregulation of xylose catabolism to ethanol","type":"exact"},{"name":"inhibition of xylose catabolic process to ethanol","type":"narrow"},{"name":"inhibition of xylose catabolism to ethanol","type":"exact"},{"name":"negative regulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900516"}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: GO:2000025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"leaf formation","termid":"GO:0010338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf formation","termid":"GO:2000025"}


id: PBO:0083362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene SIK1/YLR197W","termid":"PBO:0083362"}


id: PR:Q9USU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USU5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.08","synonyms":[{"name":"Spom972h-gas2","type":"exact"}],"termid":"PR:Q9USU5"}


id: GO:1990025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in the ventral horn of the spinal cord. F boutons range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"F bouton","termid":"GO:1990025"}


id: GO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytosine + H2O = uracil + NH3.","definition_xrefs":["EC:3.5.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"cytosine deaminase activity","secondary_identifiers":["RHEA:20605","MetaCyc:CYTDEAM-RXN"],"synonyms":[{"name":"cytosine aminohydrolase activity","type":"related"},{"name":"isocytosine deaminase activity","type":"related"}],"termid":"GO:0004131"}


id: PBO:0053439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 384","termid":"PBO:0053439"}


id: GO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4 biosynthetic process","synonyms":[{"name":"CD4 anabolism","type":"exact"},{"name":"CD4 biosynthesis","type":"exact"},{"name":"CD4 formation","type":"exact"},{"name":"CD4 synthesis","type":"exact"}],"termid":"GO:0045222"}


id: PBO:0062496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily C member 1 pseudogene","termid":"PBO:0062496"}


id: PBO:0088471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","termid":"PBO:0088471"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["PMID:36150101","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: GO:0099161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic dense core granule exocytosis.","definition_xrefs":["GOC:dos","PMID:17881523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"regulates","term_name":"presynaptic dense core vesicle exocytosis","termid":"GO:0099525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of presynaptic dense core granule exocytosis","synonyms":[{"name":"regulation of presynaptic dense core vesicle exocytosis","type":"exact"}],"termid":"GO:0099161"}


id: GO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (pseudohyphal growth) (obsolete GO:0000191)","synonyms":[{"name":"activation of MAPKKK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000191"}


id: PBO:0061706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2","termid":"PBO:0061706"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: PBO:0088494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha amylase","termid":"PBO:0088494"}


id: PBO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific APC activator Slp1","termid":"PBO:0017556"}


id: GO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of an anatomical structure of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host anatomical structure","synonyms":[{"name":"cytopathogenic effect","type":"related"},{"name":"disruption by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host structure","type":"related"}],"termid":"GO:0052111"}


id: GO:0003884
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110801],"is_not":false,"summary":null,"term":"GO:0003884"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine oxidase activity","termid":"GO:0008131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-amino-acid oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21816","Reactome:R-HSA-389821","MetaCyc:D-AMINO-ACID-OXIDASE-RXN"],"synonyms":[{"name":"D-amino-acid:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-amino acid:O2 oxidoreductase activity","type":"related"},{"name":"new yellow enzyme","type":"related"}],"termid":"GO:0003884","terms_by_termid":{"GO:0003884":null}}


id: PBO:0043647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7A","termid":"PBO:0043647"}


id: PBO:0049614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 17","termid":"PBO:0049614"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: GO:0103061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(4-) + H2O + a trans-methoxy-C60-meroacyl-[acp] = diphosphoric acid + a trans-methoxy-meroacyl-adenylate + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz","PMID:15042094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-methoxy-C60-meroacyl-AMP ligase activity","secondary_identifiers":["MetaCyc:RXN1G-4141"],"termid":"GO:0103061"}


id: PBO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13 (predicted)","termid":"PBO:0005829"}


id: GO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in host peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host peptidase activity (obsolete GO:0052149)","synonyms":[{"name":"modulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052149"}


id: GO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetophenone + CO2 = H+ + benzoyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetophenone carboxylase activity","secondary_identifiers":["GO:0018797","EC:6.4.1.-"],"termid":"GO:0018524"}


id: PBO:0088912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa","termid":"PBO:0088912"}


id: PATO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000522 herbicide sensitivity value (obsolete PATO:0000522)","termid":"PATO:0000522"}


id: FYECO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ micafungin","termid":"FYECO:0000395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin LD","termid":"FYECO:0000397"}


id: FYPO:0007274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PomBase:mah","GO:0000001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance","synonyms":[{"name":"abnormal mitochondrial inheritance","type":"exact"}],"termid":"FYPO:0007274"}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: PBO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA poly(A)-bearing (predicted)","termid":"PBO:0000699"}


id: PBO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.16","termid":"PBO:0004071"}


id: PBO:0088971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Fcp1","termid":"PBO:0088971"}


id: PR:O94313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbamoyl-phosphate synthase [ammonia], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase arginine-specific large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.08c","secondary_identifiers":["UniProtKB:O94313"],"synonyms":[{"name":"Spom972h-CPS1","type":"exact"},{"name":"arginine-specific carbamoyl-phosphate synthetase, ammonia chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94313"}


id: PBO:0076311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNJ2 intronic transcript 1","termid":"PBO:0076311"}


id: PBO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 1","termid":"PBO:0045925"}


id: SO:1000050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"No effect on the state of the RNA.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000050 sequence_variant_causing_no_change_in_transcript (obsolete SO:1000050)","synonyms":[{"name":"mutation causing no change in transcript","type":"related"},{"name":"sequence variant causing no change in transcript","type":"exact"}],"termid":"SO:1000050"}


id: GO:0090090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway","termid":"GO:0060828"},{"relation_name":"negatively_regulates","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of canonical Wnt signaling pathway","secondary_identifiers":["GO:0035414"],"synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of catenin import into nucleus","type":"narrow"},{"name":"negative regulation of catenin protein nuclear translocation","type":"narrow"}],"termid":"GO:0090090"}


id: PBO:0034230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_postsynaptic_terminal_in","termid":"PBO:0034230"}


id: FYPO:0004420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation (obsolete FYPO:0004420)","synonyms":[{"name":"increased peptidyl-serine phosphorylation","type":"exact"},{"name":"increased serine phosphorylation","type":"exact"}],"termid":"FYPO:0004420"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: GO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of electrons within the noncyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity","synonyms":[{"name":"cytochrome","type":"related"}],"termid":"GO:0045157"}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: GO:0097006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma lipoprotein particle levels","synonyms":[{"name":"plasma lipoprotein particle homeostasis","type":"narrow"}],"termid":"GO:0097006"}


id: PBO:0038817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21","termid":"PBO:0038817"}


id: PBO:0081724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 652 pseudogene 1","termid":"PBO:0081724"}


id: GO:0075034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which nuclear division occurs within a symbiont spore that contributes to appressorium formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear division involved in appressorium formation (obsolete GO:0075034)","synonyms":[{"name":"nuclear division during appressorium formation on or near host","type":"related"},{"name":"nuclear division involved in appressorium formation on or near host","type":"related"}],"termid":"GO:0075034"}


id: GO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type IV secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052058)","termid":"GO:0052058"}


id: GO:0033193
data:
  {"annotated_genes":["SJAG_03997","SJAG_02401","SJAG_03945","SJAG_01046"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90178,92255,99303,113150],"is_not":false,"summary":null,"term":"GO:0033193"}]},"cv_name":"cellular_component","definition":"A nucleosome-binding protein complex that comprises two SWIRM domain histone demethylases and two PHD finger proteins. The complex is involved in transcriptional regulation via heterochromatic silencing and the regulation of chromatin boundary formation, and was first identified in fission yeast.","definition_xrefs":["PMID:17440621","PMID:17371846","GOC:vw","PMID:17434129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01046":null,"SJAG_02401":null,"SJAG_03945":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Lsd1/2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SAPHIRE complex","type":"exact"},{"name":"Swm complex","type":"exact"},{"name":"Swm1/2 complex","type":"related"}],"termid":"GO:0033193","terms_by_termid":{"GO:0033193":null}}


id: PBO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 13 (pseudogene)","termid":"PBO:0045602"}


id: PBO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA, poly(A)-bearing RNA (predicted)","termid":"PBO:0000401"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: PBO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, implicated in vesicle-mediated transport","termid":"PBO:0008425"}


id: GO:0061769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinate + ATP = ADP + 2 H+ + nicotinate mononucleotide.","definition_xrefs":["PMID:17914902","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ribosylnicotinate kinase activity","secondary_identifiers":["Reactome:R-HSA-8869607","Reactome:R-HSA-8869606"],"termid":"GO:0061769"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: PBO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor Map3","termid":"PBO:0001763"}


id: MOD:01099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to succinyl beta-aspartyl anhydride.","definition_xrefs":["DeltaMass:244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"succinyl beta-aspartyl anhydride","synonyms":[{"name":"succinyl aspartamyl","type":"exact"}],"termid":"MOD:01099"}


id: PBO:0046039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 7","termid":"PBO:0046039"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: GO:0032785
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA elongation","type":"broad"},{"name":"down-regulation of RNA elongation","type":"broad"},{"name":"downregulation of RNA elongation","type":"broad"},{"name":"inhibition of RNA elongation","type":"broad"},{"name":"negative regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"negative regulation of transcription elongation","type":"broad"},{"name":"negative regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"negative regulation of transcriptional elongation","type":"broad"},{"name":"negative transcription elongation regulator activity","type":"related"}],"termid":"GO:0032785","terms_by_termid":{"GO:0034244":null}}


id: PBO:0040657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 1","termid":"PBO:0040657"}


id: PBO:0075074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 124","termid":"PBO:0075074"}


id: FYPO:0002031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cables is abnormal. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"},{"relation_name":"output_of","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cable morphology","synonyms":[{"name":"abnormal actin cable morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable morphology during vegetative growth","type":"exact"},{"name":"abnormal formin-nucleated actin cable morphology","type":"exact"},{"name":"disorganized actin cables","type":"exact"}],"termid":"FYPO:0002031"}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: PBO:0055798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 2, pseudogene","termid":"PBO:0055798"}


id: PBO:0039681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 2","termid":"PBO:0039681"}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: GO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional gene silencing of host genes that are homologous to viral genes after viral infection.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host gene silencing in virus induced gene silencing (obsolete GO:0060146)","termid":"GO:0060146"}


id: PBO:0086503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication","termid":"PBO:0086503"}


id: MOD:01339
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an ethyl group.","definition_xrefs":["Unimod:280","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylated residue","synonyms":[{"name":"EtRes","type":"exact"},{"name":"Ethyl","type":"related"},{"name":"Ethylation","type":"related"}],"termid":"MOD:01339"}


id: PATO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythm quality","termid":"PATO:0000078"}


id: PBO:0042474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 1","termid":"PBO:0042474"}


id: GO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:10025961","GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"latrotoxin receptor activity","synonyms":[{"name":"latrophilin","type":"narrow"}],"termid":"GO:0016524"}


id: PR:G2TRM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8E11.12 gene.","definition_xrefs":["UniProtKB:G2TRM4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8E11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.12","synonyms":[{"name":"Spom972h-SPAC8E11.12","type":"exact"}],"termid":"PR:G2TRM4"}


id: GO:0060819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genomic imprinting.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by genomic imprinting (obsolete GO:0060819)","synonyms":[{"name":"inactivation of X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060819"}


id: GO:0010230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Alternative respiration pathway consumes oxygen, oxidizes NADH to NAD+ and generates water. During electron flow, proton motive force is diminished resulting in fewer molecules of ATP compared to cytochrome pathway. The pathway is found in plants, algae and some protozoa.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"alternative respiration","termid":"GO:0010230"}


id: MOD:00273
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, two L-glutamic acid residues, an L-histidine residue and a four-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide.","definition_xrefs":["PubMed:12764602","RESID:AA0268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","synonyms":[{"name":"4Fe-2S-3O cluster","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S)","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via persulfide group","type":"exact"},{"name":"METAL Iron-oxo-sulfur (4Fe-2O-2S); via tele nitrogen","type":"exact"},{"name":"hybrid four iron cluster 2","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O5-glutamato 2-iron-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"related"},{"name":"tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino tetrairon disulfide trioxide","type":"exact"}],"termid":"MOD:00273"}


id: RO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","termid":"RO:0002328"}


id: PBO:0072990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein homolog 1","termid":"PBO:0072990"}


id: GO:0102436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-O-methylmyricetin + S-adenosyl-L-methionine = 7,4'-dimethylmyricetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"7-methylmyricetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13911"],"termid":"GO:0102436"}


id: PBO:0084535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; homolog of Drosophila crooked neck protein; interacts with U1 snRNP proteins","termid":"PBO:0084535"}


id: GO:0045062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus.","definition_xrefs":["PMID:7880383","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell selection","synonyms":[{"name":"extrathymic T lymphocyte selection","type":"exact"},{"name":"extrathymic T-cell selection","type":"exact"},{"name":"extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045062"}


id: GO:0052113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the osmotic conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host osmotic environment (obsolete GO:0052113)","synonyms":[{"name":"adaptation to host osmotic environment","type":"exact"},{"name":"osmotic tolerance to host environment","type":"exact"}],"termid":"GO:0052113"}


id: GO:0160046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + oxalate(in) = chloride(in) + oxalate(out).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"oxalate transmembrane transporter activity","termid":"GO:0019531"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oxalate:chloride antiporter activity","termid":"GO:0160046"}


id: GO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons following their loss or damage.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"},{"relation_name":"is_a","term_name":"response to axon injury","termid":"GO:0048678"},{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon regeneration","termid":"GO:0031103"}


id: PBO:0029588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_binding","termid":"PBO:0029588"}


id: PBO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 35 (pseudogene)","termid":"PBO:0045623"}


id: GO:0050116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylformamide + H2O = dimethylamine + formate.","definition_xrefs":["EC:3.5.1.56","RHEA:19517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"N,N-dimethylformamidase activity","secondary_identifiers":["MetaCyc:NN-DIMETHYLFORMAMIDASE-RXN","KEGG_REACTION:R02509"],"synonyms":[{"name":"DMFase activity","type":"related"},{"name":"N,N-dimethylformamide amidohydrolase activity","type":"related"},{"name":"dimethylformamidase activity","type":"related"}],"termid":"GO:0050116"}


id: FYECO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ornithine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ornithine","termid":"FYECO:0000086"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: GO:0043243
data:
  {"annotated_genes":["SJAG_05265","SJAG_03126","SJAG_02189","SJAG_02433","SJAG_02812","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[97927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[108020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[65693,67547,90905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02433":null,"SJAG_02812":null,"SJAG_03126":null,"SJAG_04312":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein-containing complex disassembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex disassembly","type":"narrow"},{"name":"positive regulation of protein complex disassembly","type":"related"},{"name":"stimulation of protein complex disassembly","type":"narrow"},{"name":"up regulation of protein complex disassembly","type":"exact"},{"name":"up-regulation of protein complex disassembly","type":"exact"},{"name":"upregulation of protein complex disassembly","type":"exact"}],"termid":"GO:0043243","terms_by_termid":{"GO:0031117":null,"GO:0045905":null,"GO:1901098":null,"GO:1904595":null}}


id: GO:1902548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to vascular endothelial growth factor stimulus.","definition_xrefs":["PMID:17895370","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"negatively_regulates","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to vascular endothelial growth factor stimulus","synonyms":[{"name":"down regulation of cellular response to VEGF","type":"exact"},{"name":"down regulation of cellular response to VEGFA","type":"narrow"},{"name":"down regulation of cellular response to VEGFB","type":"narrow"},{"name":"down regulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"down regulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"down-regulation of cellular response to VEGF","type":"exact"},{"name":"down-regulation of cellular response to VEGFA","type":"narrow"},{"name":"down-regulation of cellular response to VEGFB","type":"narrow"},{"name":"down-regulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"down-regulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"downregulation of cellular response to VEGF","type":"exact"},{"name":"downregulation of cellular response to VEGFA","type":"narrow"},{"name":"downregulation of cellular response to VEGFB","type":"narrow"},{"name":"downregulation of cellular response to vascular endothelial growth factor","type":"exact"},{"name":"downregulation of cellular response to vascular endothelial growth factor stimulus","type":"exact"},{"name":"inhibition of cellular response to VEGF","type":"narrow"},{"name":"inhibition of cellular response to VEGFA","type":"narrow"},{"name":"inhibition of cellular response to VEGFB","type":"narrow"},{"name":"inhibition of cellular response to vascular endothelial growth factor","type":"narrow"},{"name":"inhibition of cellular response to vascular endothelial growth factor stimulus","type":"narrow"},{"name":"negative regulation of cellular response to VEGF","type":"exact"},{"name":"negative regulation of cellular response to VEGFA","type":"narrow"},{"name":"negative regulation of cellular response to VEGFB","type":"narrow"},{"name":"negative regulation of cellular response to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1902548"}


id: PBO:0027845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027845"}


id: PBO:0059449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD2 antisense RNA 1","termid":"PBO:0059449"}


id: PBO:0074445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 46","termid":"PBO:0074445"}


id: PBO:0041342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 49","termid":"PBO:0041342"}


id: PBO:0073600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 1","termid":"PBO:0073600"}


id: PBO:0084893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX3 mRNA; acts together with Pet54p and Pet122p; located in the mitochondrial inner membrane","termid":"PBO:0084893"}


id: GO:0141160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of host phagosomes.","definition_xrefs":["PMID:30057173","PMID:21412437","PMID:15487949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host phagosome","termid":"GO:0141160"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: GO:0008426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"protein kinase C inhibitor activity","secondary_identifiers":["GO:0004863"],"synonyms":[{"name":"PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent PKC inhibitor activity","type":"exact"},{"name":"diacylglycerol-activated phospholipid-dependent protein kinase C inhibitor activity","type":"exact"}],"termid":"GO:0008426"}


id: GO:1903260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mating projection tip.","definition_xrefs":["GO_REF:0000087","PMID:11952834","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mating projection tip","synonyms":[{"name":"protein localisation in mating projection tip","type":"exact"},{"name":"protein localisation to mating projection tip","type":"exact"},{"name":"protein localization in mating projection tip","type":"exact"},{"name":"protein localization to conjugation tube tip","type":"narrow"},{"name":"protein localization to shmoo tip","type":"narrow"}],"termid":"GO:1903260"}


id: PBO:0027413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027413"}


id: GO:0008243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the specific cleavage of an Arg-Val bond in plasminogen to form plasmin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete plasminogen activator activity (obsolete GO:0008243)","synonyms":[{"name":"abbokinase activity","type":"related"},{"name":"cellular plasminogen activator activity","type":"narrow"},{"name":"double-chain urokinase-type plasminogen activator","type":"related"},{"name":"plasminogen activator activity","type":"exact"},{"name":"plasminogen activator, tissue-type","type":"related"},{"name":"t-PA","type":"related"},{"name":"t-plasminogen activator activity","type":"narrow"},{"name":"tPA activity","type":"narrow"},{"name":"tissue plasminogen activator activity","type":"narrow"},{"name":"tissue-type plasminogen activator activity","type":"related"},{"name":"two-chain urokinase-type plasminogen activator","type":"related"},{"name":"u-PA","type":"related"},{"name":"u-plasminogen activator activity","type":"narrow"},{"name":"uPA","type":"related"},{"name":"urinary esterase A","type":"related"},{"name":"urinary plasminogen activator activity","type":"narrow"},{"name":"urokinase activity","type":"related"},{"name":"urokinase plasminogen activator","type":"related"},{"name":"urokinase-type plasminogen activator","type":"related"}],"termid":"GO:0008243"}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: PBO:0027869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitosis","termid":"PBO:0027869"}


id: SO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes an enzymatic RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA_gene","synonyms":[{"name":"enzymatic RNA gene","type":"exact"}],"termid":"SO:0002180"}


id: GO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the force of skeletal muscle contraction. The force of skeletal muscle contraction is produced by acto-myosin interaction processes through the formation of cross bridges.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of skeletal muscle contraction","termid":"GO:0014728"}


id: PBO:0051521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor type 2","termid":"PBO:0051521"}


id: PBO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok12","termid":"PBO:0003644"}


id: PBO:0083412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene AAR2/YBL074C","termid":"PBO:0083412"}


id: GO:0016804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a N-terminal proline from a peptide.","definition_xrefs":["EC:3.4.11.5"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl aminopeptidase activity (obsolete GO:0016804)","synonyms":[{"name":"Pro-X aminopeptidase activity","type":"related"},{"name":"cytosol aminopeptidase V","type":"related"},{"name":"proline aminopeptidase","type":"broad"},{"name":"proline iminopeptidase activity","type":"exact"},{"name":"prolyl aminopeptidase activity","type":"exact"}],"termid":"GO:0016804"}


id: PBO:0063773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 5A","termid":"PBO:0063773"}


id: PBO:0067694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 2","termid":"PBO:0067694"}


id: GO:0006120
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108912],"is_not":false,"summary":null,"term":"GO:0006120"}]},"cv_name":"biological_process","definition":"The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, NADH to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex I (NADH to ubiquinone)","type":"related"},{"name":"oxidative phosphorylation, NADH to ubiquinone","type":"exact"}],"termid":"GO:0006120","terms_by_termid":{"GO:0006120":null}}


id: PBO:0065080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase 2B, pseudogene","termid":"PBO:0065080"}


id: PBO:0065288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 3","termid":"PBO:0065288"}


id: SO:1001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001266 stop_codon_redefinition_as_selenocysteine (obsolete SO:1001266)","termid":"SO:1001266"}


id: PBO:0084601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YLR312C-B was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, SPH1/YLR313C","termid":"PBO:0084601"}


id: GO:0002943
data:
  {"annotated_genes":["SJAG_01041","SJAG_00174","SJAG_03236","SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60299,64290,65184,65185,85591,100751,105703,114429],"is_not":false,"summary":null,"term":"GO:0002943"}]},"cv_name":"biological_process","definition":"The process whereby a uridine in a transfer RNA is converted to dihydrouridine.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA dihydrouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0002943","terms_by_termid":{"GO:0002943":null}}


id: GO:0045281
data:
  {"annotated_genes":["SJAG_03920","SJAG_02398","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85322,112800,109253,84961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["GOC:kd","InterPro:IPR000701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"respiratory chain complex II","termid":"GO:0045273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"succinate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045281","terms_by_termid":{"GO:0005749":null}}


id: PR:O59824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent zinc metalloprotease FtsH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05014","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent zinc metalloprotease YME1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.04c","secondary_identifiers":["UniProtKB:O59824"],"synonyms":[{"name":"Spom972h-ftsH","type":"exact"}],"termid":"PR:O59824"}


id: PBO:0068638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 18, pseudogene","termid":"PBO:0068638"}


id: GO:0106148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyindole-3- carbonyl nitrile (4-OH-ICN), a cyanogenic glucoside.","definition_xrefs":["GOC:lr","PMID:26352477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanogenic glycoside biosynthetic process","termid":"GO:0019756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"4-hydroxyindole-3- carbonyl nitrile biosynthesis","termid":"GO:0106148"}


id: GO:0047783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O.","definition_xrefs":["EC:1.14.15.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"corticosterone 18-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN66-360","RHEA:11872"],"synonyms":[{"name":"corticosterone 18-hydroxylase activity","type":"exact"},{"name":"corticosterone methyl oxidase activity","type":"related"},{"name":"corticosterone,reduced-adrenal-ferredoxin:oxygen oxidoreductase (18-hydroxylating)","type":"related"}],"termid":"GO:0047783"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22970133","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: PBO:0073753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 8","termid":"PBO:0073753"}


id: GO:0006167
data:
  {"annotated_genes":["SJAG_01070","SJAG_00044","SJAG_02850","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85024,99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[112883,89637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP anabolism","type":"exact"},{"name":"AMP biosynthesis","type":"exact"},{"name":"AMP formation","type":"exact"},{"name":"AMP synthesis","type":"exact"}],"termid":"GO:0006167","terms_by_termid":{"GO:0044208":null,"GO:0044209":null}}


id: PBO:0004745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Grn1","termid":"PBO:0004745"}


id: PBO:0042560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 2","termid":"PBO:0042560"}


id: PBO:0076777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis development related protein","termid":"PBO:0076777"}


id: PBO:0055725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 2","termid":"PBO:0055725"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11599","KEGG_REACTION:R07233","RHEA:42904"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: PBO:0078493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 12-1","termid":"PBO:0078493"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: PBO:0027335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pre-replicative_complex_assembly","termid":"PBO:0027335"}


id: PATO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's having color.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colored","secondary_identifiers":["PATO:0000332"],"synonyms":[{"name":"pigmented","type":"related"}],"termid":"PATO:0000336"}


id: PBO:0071705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 3","termid":"PBO:0071705"}


id: PBO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1 (predicted)","termid":"PBO:0018290"}


id: PBO:0078157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 35","termid":"PBO:0078157"}


id: PBO:0043951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B2 pseudogene 1","termid":"PBO:0043951"}


id: PBO:0029783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_morphology_(obsolete_FYPO:0002454)","termid":"PBO:0029783"}


id: PBO:0013821
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexadecameric","termid":"PBO:0013821"}


id: PBO:0069289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 545, pseudogene","termid":"PBO:0069289"}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: PBO:0049330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 2","termid":"PBO:0049330"}


id: PBO:0027265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027265"}


id: PBO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-2-oxoglutarate aldolase 1","termid":"PBO:0050452"}


id: PBO:0003081
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Hsf1","termid":"PBO:0003081"}


id: FYPO:0000140
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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id: PBO:0028607
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id: GO:0036074
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id: PBO:0027027
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id: GO:0051228
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id: PBO:0043245
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id: PBO:0080491
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id: PBO:0088225
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id: GO:1990837
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binding","termid":"GO:0043565"}],"gene_count":125,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00202":null,"SJAG_00210":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00307":null,"SJAG_00386":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00664":null,"SJAG_00692":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00883":null,"SJAG_00896":null,"SJAG_00926":null,"SJAG_00958":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01267":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01495":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01707":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01745":null,"SJAG_01762":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02242":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02747":null,"SJAG_02752":null,"SJAG_02800":null,"SJAG_02810":null,"SJAG_02813":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03014":null,"SJAG_03120":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03216":null,"SJAG_03217":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03354":null,"SJAG_03388":null,"SJAG_03451":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03905":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_03923":null,"SJAG_03927":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04527":null,"SJAG_04584":null,"SJAG_04611":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04766":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_04917":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05214":null,"SJAG_05239":null,"SJAG_05247":null,"SJAG_05253":null,"SJAG_05288":null,"SJAG_05301":null,"SJAG_05331":null,"SJAG_05337":null,"SJAG_05339":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"sequence-specific double-stranded DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"sequence-specific dsDNA binding","type":"exact"}],"termid":"GO:1990837","terms_by_termid":{"GO:0000182":null,"GO:0000976":null,"GO:0000977":null,"GO:0000978":null,"GO:0000979":null,"GO:0000987":null,"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null,"GO:0001018":null,"GO:0001046":null,"GO:0001147":null,"GO:0001162":null,"GO:0001163":null,"GO:0001164":null,"GO:0001165":null,"GO:0003688":null,"GO:0019237":null,"GO:0035939":null,"GO:0043110":null,"GO:0044374":null,"GO:0044377":null,"GO:0071443":null,"GO:0110035":null,"GO:1990837":null,"GO:1990943":null}}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: GO:0019729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP583 chromophore cross-link from the alpha-carboxyl carbon of residue n, a glutamine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0189"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine (obsolete GO:0019729)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-glutaminyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0019729"}


id: GO:1902801
data:
  {"annotated_genes":["SJAG_01867","SJAG_02622","SJAG_03664","SJAG_01599","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87966,93294,96381,113773,114123],"is_not":false,"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA-independent facultative heterochromatin assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"siRNA-independent facultative heterochromatin formation","termid":"GO:1902794"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_01867":null,"SJAG_02622":null,"SJAG_03624":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"regulation of siRNA-independent facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin island assembly","type":"exact"},{"name":"regulation of heterochromatin island formation","type":"exact"},{"name":"regulation of siRNA-independent facultative heterochromatin assembly","type":"exact"}],"termid":"GO:1902801","terms_by_termid":{"GO:1902801":null}}


id: GO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + K+(out) = ADP + phosphate + K+(in). It is a high affinity potassium uptake system. The E. coli complex consists of 4 proteins: KdpA is the potassium ion translocase, KdpB is the ATPase, and KdpC and KdpF seem to be involved in assembly and stabilization of the complex.","definition_xrefs":["PMID:9858692","PMID:10608856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"potassium ion-transporting ATPase complex","synonyms":[{"name":"Kdp system complex","type":"exact"}],"termid":"GO:0031004"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: PBO:0108571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-K4 methyltransferase Set1","termid":"PBO:0108571"}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: GO:0048082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cuticle pigmentation","termid":"GO:0048079"},{"relation_name":"regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"}


id: PBO:0079261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC32 divergent transcript","termid":"PBO:0079261"}


id: PBO:0078500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 2-3","termid":"PBO:0078500"}


id: GO:0061122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis","termid":"GO:0050927"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"},{"relation_name":"positively_regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis to cAMP","termid":"GO:0061122"}


id: PBO:0039338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, placental","termid":"PBO:0039338"}


id: GO:2000929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"positively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellodextrin catabolic process","synonyms":[{"name":"positive regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000929"}


id: PBO:0003509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidic acid phosphatase (predicted)","termid":"PBO:0003509"}


id: GO:0010063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that induces or promotes trichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trichoblast fate specification","termid":"GO:0010061"},{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of plant epidermal cell differentiation","termid":"GO:1903890"},{"relation_name":"positively_regulates","term_name":"trichoblast fate specification","termid":"GO:0010057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trichoblast fate specification","synonyms":[{"name":"activation of trichoblast fate","type":"narrow"},{"name":"stimulation of trichoblast fate","type":"narrow"},{"name":"up regulation of trichoblast fate","type":"exact"},{"name":"up-regulation of trichoblast fate","type":"exact"},{"name":"upregulation of trichoblast fate","type":"exact"}],"termid":"GO:0010063"}


id: PBO:0067544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 690, pseudogene","termid":"PBO:0067544"}


id: PBO:0034537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiotic_cell_cycle_checkpoint_phenotype","termid":"PBO:0034537"}


id: PBO:0083949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; Ost3p is important for N-glycosylation of a subset of proteins including modification of Pmt2p at N131 and N403","termid":"PBO:0083949"}


id: PBO:0026956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_cell_tip","termid":"PBO:0026956"}


id: GO:0007516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hemocyte over time, from its formation to the mature structure. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte development","synonyms":[{"name":"arthropod blood cell development","type":"exact"}],"termid":"GO:0007516"}


id: PBO:0028272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028272"}


id: GO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin binding","termid":"GO:0043559"}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: GO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of phagocytosis in other organism involved in symbiotic interaction (obsolete GO:0052522)","synonyms":[{"name":"activation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"stimulation by organism of phagocytosis in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"upregulation by organism of phagocytosis in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052522"}


id: GO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group catabolic process (obsolete GO:0046139)","synonyms":[{"name":"coenzyme and prosthetic group breakdown","type":"exact"},{"name":"coenzyme and prosthetic group catabolic process","type":"exact"},{"name":"coenzyme and prosthetic group catabolism","type":"exact"},{"name":"coenzyme and prosthetic group degradation","type":"exact"}],"termid":"GO:0046139"}


id: PBO:0073005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 4","termid":"PBO:0073005"}


id: GO:0005700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome","secondary_identifiers":["Wikipedia:Polytene_chromosome"],"termid":"GO:0005700"}


id: GO:0080006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determines the spacing between two shoot nodes. A shoot node is the region of the shoot where the spikelet, flower, floret, branch, bud and/or leaves are attached.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internode patterning","termid":"GO:0080006"}


id: PBO:0091774
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2219928_2219929insT","termid":"PBO:0091774"}


id: PBO:0068270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 7","termid":"PBO:0068270"}


id: GO:0051057
data:
  {"annotated_genes":["SJAG_01805","SJAG_03936","SJAG_03048","SJAG_00329","SJAG_04776","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[83695,86134,89911,98467,106588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00329":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of small GTPase mediated signal transduction","type":"narrow"},{"name":"positive regulation of small GTPase-mediated signal transduction","type":"exact"},{"name":"stimulation of small GTPase mediated signal transduction","type":"narrow"},{"name":"up regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"up-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"upregulation of small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0051057","terms_by_termid":{"GO:0031031":null,"GO:0046579":null}}


id: PBO:0011502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant (predicted)","termid":"PBO:0011502"}


id: GO:0140770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-CoA = CoA + H+ + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:59752","PMID:1402651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140770"}


id: PBO:0049979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein nuclear import factor hikeshi","termid":"PBO:0049979"}


id: FYPO:0002699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"},{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002699"}


id: FYPO:0008080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a heptakisphosphate 5-kinase is decreased.","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008080"}


id: GO:0034749
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant) and the tumor suppressor protein adenomatous polyposis coli (APC); may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Scrib-APC complex","synonyms":[{"name":"hScrib-APC complex","type":"narrow"}],"termid":"GO:0034749"}


id: PR:Q9UUJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 7b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.12c","secondary_identifiers":["UniProtKB:Q9UUJ7"],"synonyms":[{"name":"Spom972h-COPS7B","type":"exact"}],"termid":"PR:Q9UUJ7"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: PBO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1 family transcriptional regulator Sgt1","termid":"PBO:0001199"}


id: PBO:0039551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 45","termid":"PBO:0039551"}


id: SO:0001561
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes some but not all loss of polypeptide function with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_partial_loss_of_function","synonyms":[{"name":"polypeptide partial loss of function","type":"exact"}],"termid":"SO:0001561"}


id: PBO:0080808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 4","termid":"PBO:0080808"}


id: GO:0051958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of methotrexate, 4-amino-10-methylformic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Methotrexate is a folic acid analogue and a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"methotrexate transport","termid":"GO:0051958"}


id: GO:0048473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-methionine is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:mlg","PMID:12169620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"methionine transport","termid":"GO:0015821"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-methionine transmembrane transport","termid":"GO:0048473"}


id: PBO:0046980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member D, pseudogene","termid":"PBO:0046980"}


id: SO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: FYPO:0001658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal valine import","synonyms":[{"name":"abnormal L-valine import","type":"exact"},{"name":"abnormal L-valine import across plasma membrane","type":"exact"},{"name":"abnormal valine import during mitotic cell cycle","type":"related"},{"name":"abnormal valine import during vegetative growth","type":"exact"},{"name":"abnormal valine import into cell","type":"exact"},{"name":"abnormal valine uptake","type":"exact"}],"termid":"FYPO:0001658"}


id: PBO:0078358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-1","termid":"PBO:0078358"}


id: PBO:0077969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 21-1","termid":"PBO:0077969"}


id: GO:0035150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube is of the correct length and diameter. Tube size must be maintained not only during tube formation, but also throughout development and in some physiological processes.","definition_xrefs":["PMID:10887083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube size","termid":"GO:0035150"}


id: GO:1990446
data:
  {"annotated_genes":["SJAG_04914","SJAG_02558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87903,109921],"is_not":false,"summary":null,"term":"GO:1990446"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear ribonucleoprotein particle.","definition_xrefs":["PMID:14713954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNP binding","termid":"GO:0070990"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02558":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"U1 snRNP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990446","terms_by_termid":{"GO:1990446":null}}


id: GO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"negatively_regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"}


id: GO:0018705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dichloroethene + 2 H+ + 2 e- = HCl + vinyl chloride.","definition_xrefs":["UM-BBD_enzymeID:e0272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,2-dichloroethene reductive dehalogenase activity","synonyms":[{"name":"1,2-dichloroethylene reductive dehalogenase activity","type":"exact"}],"termid":"GO:0018705"}


id: PBO:0043632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic obstructive pulmonary disease associated lncRNA 1","termid":"PBO:0043632"}


id: GO:0034528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-carboxy-2-hydroxy-8-carboxychromene = 2-hydroxy-3-carboxybenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-carboxy-2-hydroxy-8-carboxychromene isomerase activity","secondary_identifiers":["EC:5.3.99.-"],"termid":"GO:0034528"}


id: PBO:0036237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase complex and tRNA (m2G10) methyltransferase complex regulatory subunit Trm112 (predicted)","termid":"PBO:0036237"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: PBO:0074865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 50A","termid":"PBO:0074865"}


id: GO:0180011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which dormant, translationally inactive mRNAs become activated, or mRNAs become stabilized, via the elongation of their poly(A) tails in the cytosol.","definition_xrefs":["PMID:21536428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"cytosolic mRNA polyadenylation","termid":"GO:0180011"}


id: PBO:0086424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative haloacid dehalogenase-like hydrolase; non-essential gene; overexpression causes a cell cycle delay or arrest; protein abundance increases in response to DNA replication stress","termid":"PBO:0086424"}


id: PR:Q9C0X3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.15c","synonyms":[{"name":"Spom972h-SPBC13G1.15c","type":"exact"}],"termid":"PR:Q9C0X3"}


id: PBO:0110258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110258"}


id: PBO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 3","termid":"PBO:0060056"}


id: PBO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mads BoX protein","termid":"PBO:0004021"}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: SO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-functional descendant of a functional entity.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_region","synonyms":[{"name":"pseudogenic region","type":"exact"}],"termid":"SO:0000462"}


id: PBO:0049279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 2","termid":"PBO:0049279"}


id: GO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of natural killer cells.","definition_xrefs":["GOC:jal","PMID:16546094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell tolerance induction","synonyms":[{"name":"NK cell tolerance induction","type":"exact"}],"termid":"GO:0002519"}


id: GO:0106405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the dephosphorylation of isoprenoid diphosphates.","definition_xrefs":["PMID:33246356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"isoprenoid diphosphate phosphatase activity","termid":"GO:0106405"}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: GO:0045188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"regulation of non-REM sleep","type":"exact"}],"termid":"GO:0045188"}


id: PBO:0069885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1174, pseudogene","termid":"PBO:0069885"}


id: GO:0004595
data:
  {"annotated_genes":["SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88326],"is_not":false,"summary":null,"term":"GO:0004595"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine 4'-phosphate = 3'-dephospho-CoA + diphosphate.","definition_xrefs":["RHEA:19801","EC:2.7.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"pantetheine-phosphate adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PANTEPADENYLYLTRAN-RXN","KEGG_REACTION:R03035","Reactome:R-HSA-196754"],"synonyms":[{"name":"3'-dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"ATP:pantetheine-4'-phosphate adenylyltransferase activity","type":"related"},{"name":"ATP:pantetheine-phosphate adenylyltransferase activity","type":"exact"},{"name":"PPAT activity","type":"related"},{"name":"dephospho-CoA diphosphorylase activity","type":"related"},{"name":"dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"dephospho-coenzyme A pyrophosphorylase activity","type":"related"},{"name":"pantetheine phosphate adenylyltransferase activity","type":"related"},{"name":"phosphopantetheine adenylyltransferase activity","type":"exact"}],"termid":"GO:0004595","terms_by_termid":{"GO:0004595":null}}


id: PBO:0053904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1194","termid":"PBO:0053904"}


id: PBO:0005721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.2","termid":"PBO:0005721"}


id: PBO:0075050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-13","termid":"PBO:0075050"}


id: GO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b6 (obsolete GO:0030066)","synonyms":[{"name":"cytochrome b-563","type":"related"},{"name":"cytochrome b6","type":"exact"}],"termid":"GO:0030066"}


id: GO:0032397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that activates a lymphocyte.","definition_xrefs":["PMID:11858820","PMID:9597134","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"activating MHC class I receptor activity","termid":"GO:0032397"}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["PMID:23527112","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: MOD:01871
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxamidomethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of ammonia.","definition_xrefs":["DeltaMass:336","Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized N-terminal S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01871"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: PBO:0026983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_elongated_oscillating_nucleus","termid":"PBO:0026983"}


id: PBO:0077375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 116","termid":"PBO:0077375"}


id: GO:0046351
data:
  {"annotated_genes":["SJAG_00129","SJAG_01531","SJAG_01862","SJAG_00182","SJAG_01209","SJAG_01427","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104966,87951,89441,92622,93244,97135,73392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of disaccharides, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"},{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"disaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"disaccharide anabolism","type":"exact"},{"name":"disaccharide biosynthesis","type":"exact"},{"name":"disaccharide formation","type":"exact"},{"name":"disaccharide synthesis","type":"exact"}],"termid":"GO:0046351","terms_by_termid":{"GO:0005992":null}}


id: PBO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Caj1/Djp1 type (predicted)","termid":"PBO:0002240"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114766],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: PBO:0090830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Pkd2","termid":"PBO:0090830"}


id: PBO:0069282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 538, pseudogene","termid":"PBO:0069282"}


id: FYPO:0006754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which promoter-enhancer looping occurs to a lower extent than normal when the cell is subject to glucose starvation. Promoter-enhancer looping is mediated by interactions between proteins bound to DNA at promoters and at enhancers, or by a single protein binding at both sites.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased promoter-enhancer looping during glucose starvation","synonyms":[{"name":"decreased promoter-enhancer looping during glucose depletion","type":"exact"},{"name":"decreased promoter-enhancer looping during glucose deprivation","type":"exact"}],"termid":"FYPO:0006754"}


id: PBO:0056530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA-acyl carrier protein transacylase","termid":"PBO:0056530"}


id: PR:O42967
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ubiquitin-like protein C1E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.02","synonyms":[{"name":"Spom972h-SPBC1E8.02","type":"exact"}],"termid":"PR:O42967"}


id: GO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural retina development","termid":"GO:0061074"}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: PBO:0067700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 8","termid":"PBO:0067700"}


id: PBO:0064331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 1","termid":"PBO:0064331"}


id: PBO:0089585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: GO:0033343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen binding.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of collagen binding","termid":"GO:0033341"},{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen binding","synonyms":[{"name":"activation of collagen binding","type":"narrow"},{"name":"stimulation of collagen binding","type":"narrow"},{"name":"up regulation of collagen binding","type":"exact"},{"name":"up-regulation of collagen binding","type":"exact"},{"name":"upregulation of collagen binding","type":"exact"}],"termid":"GO:0033343"}


id: PBO:0065163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion locus lncRNA, testis expressed","termid":"PBO:0065163"}


id: PBO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf72-SMCR8 complex subunit","termid":"PBO:0041440"}


id: GO:1903133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:22898778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of tube lumen cavitation","termid":"GO:1903132"},{"relation_name":"negatively_regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tube lumen cavitation","synonyms":[{"name":"inhibition of tube lumen cavitation","type":"narrow"}],"termid":"GO:1903133"}


id: GO:0140053
data:
  {"annotated_genes":["SJAG_01473","SJAG_04409","SJAG_03040","SJAG_00799","SJAG_04173","SJAG_03584","SJAG_01806","SJAG_05560","SJAG_02856","SJAG_04216","SJAG_02991","SJAG_00944","SJAG_05270","SJAG_04164","SJAG_04689","SJAG_00833","SJAG_02359","SJAG_04840","SJAG_05218","SJAG_02762","SJAG_03232","SJAG_03674","SJAG_01352","SJAG_05271","SJAG_01463","SJAG_03322","SJAG_06253","SJAG_01591","SJAG_05244","SJAG_00308","SJAG_02526","SJAG_01478","SJAG_01797","SJAG_00428","SJAG_01446","SJAG_02836","SJAG_00497","SJAG_00255","SJAG_03550","SJAG_04493","SJAG_02324","SJAG_03636","SJAG_02452","SJAG_02353","SJAG_05008","SJAG_01577","SJAG_05249","SJAG_03459","SJAG_00782","SJAG_04862","SJAG_03176","SJAG_03014","SJAG_03053","SJAG_04635","SJAG_07009","SJAG_00086","SJAG_16456","SJAG_04207","SJAG_00847","SJAG_04377","SJAG_03426","SJAG_04281","SJAG_04885","SJAG_01520","SJAG_03649","SJAG_04244","SJAG_00889","SJAG_00231","SJAG_01630","SJAG_01249","SJAG_01413","SJAG_02721","SJAG_00105","SJAG_04889","SJAG_04738","SJAG_02777","SJAG_04893","SJAG_04929","SJAG_02615","SJAG_00462","SJAG_06110","SJAG_04473","SJAG_02217","SJAG_03104","SJAG_04494","SJAG_01468","SJAG_03585","SJAG_00628","SJAG_04856","SJAG_05573","SJAG_05320","SJAG_04019","SJAG_00286","SJAG_01882","SJAG_01045","SJAG_03461","SJAG_04918","SJAG_00865","SJAG_02548","SJAG_01368","SJAG_02643","SJAG_04064","SJAG_02071","SJAG_03071","SJAG_05221","SJAG_03402","SJAG_03284","SJAG_04753","SJAG_00844","SJAG_00077","SJAG_04700","SJAG_03065","SJAG_04113","SJAG_03192","SJAG_01518","SJAG_02067","SJAG_04094","SJAG_00513","SJAG_04351","SJAG_06586","SJAG_00358","SJAG_04378","SJAG_00936","SJAG_00315","SJAG_04240","SJAG_05693","SJAG_06038","SJAG_01727","SJAG_01704","SJAG_00997","SJAG_01303","SJAG_04959","SJAG_00148","SJAG_00653","SJAG_00887","SJAG_02236","SJAG_01734","SJAG_01719","SJAG_00860","SJAG_04367","SJAG_04490","SJAG_02288","SJAG_00797","SJAG_00659","SJAG_04788","SJAG_00103","SJAG_04285","SJAG_02302","SJAG_02977","SJAG_00060","SJAG_02428","SJAG_01829","SJAG_01517","SJAG_02201","SJAG_03289","SJAG_01174","SJAG_03297","SJAG_01767"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71593,83882,84548,96138,96534,98752,99715,100010,101500,101704,102174,103343,105827,110016,111338,112559],"is_not":false,"summary":null,"term":"GO:0140053"},{"annotations":[89822],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070143"},{"annotations":[103281],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070144"},{"annotations":[114064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070146"},{"annotations":[93109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070150"},{"annotations":[92348,106672,86092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[105963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[95040,110483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[109949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[99688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000963"},{"annotations":[90765],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070158"},{"annotations":[83575],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006390"},{"annotations":[108204,108950,103261,111459,112096,87673,112207,113148,90293,103176,104149,108521,87755,99411,105906,112315,87571,90579,99439,107159,108420,91449,92731,104294,92360,97374,106201,110760,112064,99519,100013,108777,114050,106733,104247,102451,108283,98394,92321,101907,102090,86012,84422,85168,97532,104010,104152,85009,104210,90573,106841,100079,113039,92696,95185,102817,99769,106446,89919,94186,98011,110367,111413,101760,105426,88089,94062,110643,85609,88183,94082,113936,104538,94316,108923,97172,92998,111287,86066,92029,84510,98693,111632,91345,111718,98348,113421,114089,94088,100919,94089,99161,114409,92042,97363,88898,90591,104434,109512,104652,100436,92761,107346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032543"},{"annotations":[108924,108205,77874,107579,98963],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070125"},{"annotations":[89755,98705,101647,87116,104405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070124"},{"annotations":[98147,91604,94743,92043,100764],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070126"},{"annotations":[83897,105964,113940,79169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[114626,110297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[112998,90366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[88899,104539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[93394],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070183"},{"annotations":[93768],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070185"},{"annotations":[97989,108727,94794],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070131"},{"annotations":[96535],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[83577,91237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006391"}]},"cv_name":"biological_process","definition":"The process in which a mitochondrial gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.","definition_xrefs":["PMID:27058308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":158,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00103":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00231":null,"SJAG_00255":null,"SJAG_00286":null,"SJAG_00308":null,"SJAG_00315":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00462":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00653":null,"SJAG_00659":null,"SJAG_00782":null,"SJAG_00797":null,"SJAG_00799":null,"SJAG_00833":null,"SJAG_00844":null,"SJAG_00847":null,"SJAG_00860":null,"SJAG_00865":null,"SJAG_00887":null,"SJAG_00889":null,"SJAG_00936":null,"SJAG_00944":null,"SJAG_00997":null,"SJAG_01045":null,"SJAG_01174":null,"SJAG_01249":null,"SJAG_01303":null,"SJAG_01352":null,"SJAG_01368":null,"SJAG_01413":null,"SJAG_01446":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01517":null,"SJAG_01518":null,"SJAG_01520":null,"SJAG_01577":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01704":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01797":null,"SJAG_01806":null,"SJAG_01829":null,"SJAG_01882":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02217":null,"SJAG_02236":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02324":null,"SJAG_02353":null,"SJAG_02359":null,"SJAG_02428":null,"SJAG_02452":null,"SJAG_02526":null,"SJAG_02548":null,"SJAG_02615":null,"SJAG_02643":null,"SJAG_02721":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_02856":null,"SJAG_02977":null,"SJAG_02991":null,"SJAG_03014":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03071":null,"SJAG_03104":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03232":null,"SJAG_03284":null,"SJAG_03289":null,"SJAG_03297":null,"SJAG_03322":null,"SJAG_03402":null,"SJAG_03426":null,"SJAG_03459":null,"SJAG_03461":null,"SJAG_03550":null,"SJAG_03584":null,"SJAG_03585":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_03674":null,"SJAG_04019":null,"SJAG_04064":null,"SJAG_04094":null,"SJAG_04113":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04240":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04285":null,"SJAG_04351":null,"SJAG_04367":null,"SJAG_04377":null,"SJAG_04378":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04635":null,"SJAG_04689":null,"SJAG_04700":null,"SJAG_04738":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_04862":null,"SJAG_04885":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_04929":null,"SJAG_04959":null,"SJAG_05008":null,"SJAG_05218":null,"SJAG_05221":null,"SJAG_05244":null,"SJAG_05249":null,"SJAG_05270":null,"SJAG_05271":null,"SJAG_05320":null,"SJAG_05560":null,"SJAG_05573":null,"SJAG_05693":null,"SJAG_06038":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_06586":null,"SJAG_07009":null,"SJAG_16456":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial gene expression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140053","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0006390":null,"GO:0006391":null,"GO:0032543":null,"GO:0070124":null,"GO:0070125":null,"GO:0070126":null,"GO:0070131":null,"GO:0070134":null,"GO:0070143":null,"GO:0070144":null,"GO:0070146":null,"GO:0070150":null,"GO:0070158":null,"GO:0070183":null,"GO:0070185":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:0140053":null,"GO:1990180":null,"GO:1990799":null}}


id: PR:P87061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.06","synonyms":[{"name":"Spom972h-tea1","type":"exact"},{"name":"altered polarity protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell polarity protein tea1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87061"}


id: PBO:0064294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 2","termid":"PBO:0064294"}


id: PBO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 10","termid":"PBO:0046568"}


id: GO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial inner membrane (obsolete GO:0031305)","synonyms":[{"name":"integral to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031305"}


id: PBO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 3","termid":"PBO:0051513"}


id: PBO:0079504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 2","termid":"PBO:0079504"}


id: PBO:0045972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain binding protein 1","termid":"PBO:0045972"}


id: GO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast development","termid":"GO:0048901"}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["UniProtKB:P23636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: PATO:0025000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potability","synonyms":[{"name":"drinkability","type":"exact"}],"termid":"PATO:0025000"}


id: PR:O60016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-9 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.08c","synonyms":[{"name":"H3-K9-HMTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-clr4","type":"exact"},{"name":"cryptic loci regulator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone H3-K9 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60016"}


id: PBO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_alanine_level","termid":"PBO:0030578"}


id: PBO:0076682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 1","termid":"PBO:0076682"}


id: PBO:0073527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing GRB2 like 1, endophilin A2","termid":"PBO:0073527"}


id: GO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxyimino)propanoate + acetone = acetone oxime + pyruvate.","definition_xrefs":["RHEA:11624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oximinotransferase activity","secondary_identifiers":["KEGG_REACTION:R03796","MetaCyc:OXIMINOTRANSFERASE-RXN","GO:0016770","EC:2.6.3.1"],"synonyms":[{"name":"oximase activity","type":"related"},{"name":"oximinotransaminase activity","type":"related"},{"name":"pyruvate-acetone oximinotransferase activity","type":"related"},{"name":"transoximase activity","type":"related"},{"name":"transoximinase activity","type":"related"}],"termid":"GO:0050206"}


id: GO:0009734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16990790","PMID:18647826","GOC:mah","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to auxin stimulus","termid":"GO:0071365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"auxin-activated signaling pathway","synonyms":[{"name":"auxin mediated signaling pathway","type":"related"},{"name":"auxin mediated signalling","type":"exact"},{"name":"auxin signal transduction","type":"exact"},{"name":"auxin signaling","type":"exact"},{"name":"auxin-regulated transcription","type":"related"}],"termid":"GO:0009734"}


id: PR:Q09668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L22-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02205","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.15","secondary_identifiers":["UniProtKB:Q09668"],"synonyms":[{"name":"Spom972h-RPL22L1","type":"exact"}],"termid":"PR:Q09668"}


id: GO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide = (Z)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide.","definition_xrefs":["RHEA:21848","EC:5.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"furylfuramide isomerase activity","secondary_identifiers":["MetaCyc:FURYLFURAMIDE-ISOMERASE-RXN","KEGG_REACTION:R04538"],"synonyms":[{"name":"2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide cis-trans-isomerase activity","type":"related"}],"termid":"GO:0047907"}


id: GO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type I receptor (obsolete GO:0008259)","synonyms":[{"name":"TGF-beta ligand binding to type I receptor","type":"exact"},{"name":"TGFbeta ligand binding to type I receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"exact"}],"termid":"GO:0008259"}


id: PBO:0063674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 3","termid":"PBO:0063674"}


id: PBO:0073176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein H","termid":"PBO:0073176"}


id: PBO:0003965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S35","termid":"PBO:0003965"}


id: PBO:0074487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 4","termid":"PBO:0074487"}


id: FYPO:0006151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of SUMO-specific protease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal SUMO-specific protease activity","termid":"FYPO:0006151"}


id: GO:0035454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to its stromal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of lumenal side of plastid thylakoid membrane","termid":"GO:0035450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of stromal side of plastid inner membrane","synonyms":[{"name":"extrinsic to stromal leaflet of plastid inner membrane","type":"exact"},{"name":"extrinsic to stromal side of plastid inner membrane","type":"narrow"},{"name":"peripheral to stromal side of plastid inner membrane","type":"exact"}],"termid":"GO:0035454"}


id: PBO:0038369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulatory_component_activity","termid":"PBO:0038369"}


id: PBO:0083343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene CMP2/YML057W","termid":"PBO:0083343"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: GO:0045688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antipodal cell differentiation","termid":"GO:0045688"}


id: GO:1904053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"positively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"activation of protein targeting to vacuole involved in autophagy","type":"narrow"},{"name":"up regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"up-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"upregulation of protein targeting to vacuole involved in autophagy","type":"exact"}],"termid":"GO:1904053"}


id: GO:2000847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"negatively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticosteroid hormone secretion","synonyms":[{"name":"negative regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000847"}


id: GO:0014714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, taking place in the head, whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in head","termid":"GO:0014714"}


id: PBO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor Nxt2","termid":"PBO:0001533"}


id: PBO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4B","termid":"PBO:0061882"}


id: GO:1901797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction by p53 class mediator.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"signal transduction by p53 class mediator","termid":"GO:0072331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of signal transduction by p53 class mediator","type":"narrow"}],"termid":"GO:1901797"}


id: PBO:0054015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1345","termid":"PBO:0054015"}


id: PBO:0040550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3","termid":"PBO:0040550"}


id: FYPO:0001752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased homocitrate synthase activity","synonyms":[{"name":"reduced homocitrate synthase activity","type":"exact"}],"termid":"FYPO:0001752"}


id: FYPO:0000696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000696"}


id: GO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in primitive streak formation (obsolete GO:0090011)","synonyms":[{"name":"Wnt receptor signaling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt-activated signaling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090011"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: PBO:0024828
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Brassica napus BnMAP4Kalpha2","termid":"PBO:0024828"}


id: MOD:00755
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an iodine atom of a residue for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodinated residue","synonyms":[{"name":"IRes","type":"exact"}],"termid":"MOD:00755"}


id: GO:1904033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of t-SNARE clustering.","definition_xrefs":["PMID:22528485","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of t-SNARE clustering","termid":"GO:1904032"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"t-SNARE clustering","termid":"GO:1990656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of t-SNARE clustering","synonyms":[{"name":"down regulation of t-SNARE clustering","type":"exact"},{"name":"down-regulation of t-SNARE clustering","type":"exact"},{"name":"downregulation of t-SNARE clustering","type":"exact"},{"name":"inhibition of t-SNARE clustering","type":"narrow"}],"termid":"GO:1904033"}


id: MOD:00314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine cholesterol ester.","definition_xrefs":["PubMed:11111088","PubMed:8824192","RESID:AA0309","Unimod:432#C-term","ChEBI:143135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cholesterol ester","synonyms":[{"name":"C-cholesterol","type":"related"},{"name":"LIPID Cholesterol glycine ester","type":"exact"},{"name":"cholesterol ester","type":"related"},{"name":"cholesteryl glycinate","type":"exact"},{"name":"glycine cholest-5-en-3beta-ol ester","type":"exact"},{"name":"glycine cholesterol ester","type":"exact"},{"name":"hedgehog lipophilic adduct","type":"exact"}],"termid":"MOD:00314"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: GO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction","secondary_identifiers":["Wikipedia:Neuromuscular_junction","NIF_Subcellular:sao1124888485"],"synonyms":[{"name":"NMJ","type":"related"},{"name":"motor endplate","type":"related"}],"termid":"GO:0031594"}


id: PBO:0047285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group L","termid":"PBO:0047285"}


id: PBO:0051896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 5","termid":"PBO:0051896"}


id: PBO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin C","termid":"PBO:0047680"}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0005447","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: PBO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps17","termid":"PBO:0000555"}


id: GO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of cell outer membrane (obsolete GO:0031230)","synonyms":[{"name":"intrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031230"}


id: PBO:0063809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 1","termid":"PBO:0063809"}


id: MOD:00673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to a methylated asparagine, such as N4-methyl-L-asparagine, or N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated asparagine","synonyms":[{"name":"MeAsn","type":"exact"}],"termid":"MOD:00673"}


id: GO:0035446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol + L-cysteine + ATP = 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside + AMP + diphosphate + 2 H+. 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol is also known as glucosaminyl-inositol or GlcN-Ins, and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as desacetylmycothiol or Cys-GlcN-Ins.","definition_xrefs":["PMID:12033919","EC:6.3.1.13","MetaCyc:RXN1G-4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cysteine-glucosaminylinositol ligase activity","secondary_identifiers":["RHEA:26176"],"synonyms":[{"name":"L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase","type":"related"},{"name":"MshC ligase","type":"related"},{"name":"desacetylmycothiol synthase","type":"related"}],"termid":"GO:0035446"}


id: PBO:0091137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L30","termid":"PBO:0091137"}


id: GO:2000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000161)","termid":"GO:2000161"}


id: PBO:0085268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal acyl-CoA thioesterase; likely to be involved in fatty acid oxidation rather than fatty acid synthesis; conserved protein also found in human peroxisomes; TES1 mRNA levels increase during growth on fatty acids","termid":"PBO:0085268"}


id: PBO:0049049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 42","termid":"PBO:0049049"}


id: PBO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.4","termid":"PBO:0002428"}


id: PBO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 1","termid":"PBO:0060171"}


id: GO:1901089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any acetate ester metabolic process that is involved in fermentation.","definition_xrefs":["GOC:sgd_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"part_of","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetate ester metabolic process involved in fermentation","synonyms":[{"name":"acetate ester metabolic process during fermentation","type":"exact"}],"termid":"GO:1901089"}


id: GO:1901546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle lumen acidification.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"regulates","term_name":"synaptic vesicle lumen acidification","termid":"GO:0097401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of synaptic vesicle lumen acidification","synonyms":[{"name":"regulation of synaptic vesicle lumen pH reduction","type":"exact"},{"name":"regulation of synaptic vesicle lumen proton loading","type":"exact"}],"termid":"GO:1901546"}


id: FYPO:0001785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of sterol binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid binding","termid":"FYPO:0007250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sterol binding","synonyms":[{"name":"abnormal cholesterol binding","type":"narrow"},{"name":"abnormal ergosterol binding","type":"narrow"}],"termid":"FYPO:0001785"}


id: FYPO:0005825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to iron","synonyms":[{"name":"hypersensitive to iron","type":"exact"},{"name":"sensitive to iron during mitotic cell cycle","type":"related"},{"name":"sensitive to iron during vegetative growth","type":"exact"},{"name":"sensitive to iron ions","type":"exact"}],"termid":"FYPO:0005825"}


id: GO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"},{"relation_name":"is_a","term_name":"transmembrane receptor protein phosphatase activity","termid":"GO:0019198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016788","GO:0038023","GO:0003824","GO:0004721","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine phosphatase activity","termid":"GO:0005001"}


id: PBO:0075021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-32","termid":"PBO:0075021"}


id: GO:0097388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 production","synonyms":[{"name":"CCL19 production","type":"exact"},{"name":"EBI1 ligand chemokine production","type":"exact"},{"name":"ELC production","type":"exact"},{"name":"MIP-3-beta production","type":"exact"},{"name":"macrophage inflammatory protein-3-beta production","type":"exact"}],"termid":"GO:0097388"}


id: GO:0061250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesonephric glomerular epithelial cell. Mesonephric glomerular epithelial cells are specialized epithelial cells that form part of the mesonephric glomerulus; there are two types, mesonephric glomerular parietal epithelial cells and mesonephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"},{"relation_name":"part_of","term_name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelial cell differentiation","termid":"GO:0061250"}


id: PBO:0060550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX epimerase","termid":"PBO:0060550"}


id: GO:0044013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2B L-lysine = CoA + histone H2B N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0034212"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0034212","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H2B acetyltransferase activity","synonyms":[{"name":"H2B histone acetylase activity","type":"exact"},{"name":"H2B histone acetyltransferase activity","type":"exact"},{"name":"H2B histone lysine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0044013"}


id: PBO:0090619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, xap-5-like protein","termid":"PBO:0090619"}


id: SO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_oligo","synonyms":[{"name":"single strand oligo","type":"exact"},{"name":"single strand oligonucleotide","type":"exact"},{"name":"single stranded oligonucleotide","type":"exact"},{"name":"ss oligo","type":"exact"},{"name":"ss oligonucleotide","type":"exact"}],"termid":"SO:0000441"}


id: PR:Q10064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tra2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PI3/PI4-kinase family protein C1F5.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.11c","synonyms":[{"name":"Spom972h-tra2","type":"exact"}],"termid":"PR:Q10064"}


id: PBO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 4","termid":"PBO:0044736"}


id: PBO:0080447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 8","termid":"PBO:0080447"}


id: GO:0141117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents the activation of host complement by binding a soluble complement control protein (CCP) of the host and recruiting it to the microbe surface. The normal role of CCPs is to prevent complement activation on 'self' cellular targets. When soluble CCPs are recuited to the surface of a microbe, the complement fails to activate.","definition_xrefs":["PMID:17513779","PMID:24129254","PMID:22540535","PMID:27304426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by recruitment of complement control protein","synonyms":[{"name":"suppression of complement activation by another organism by recruitment of complement control protein","type":"broad"},{"name":"suppression of complement activation by another organism by recuitement of complement control protein","type":"exact"}],"termid":"GO:0141117"}


id: PBO:0040252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 9A","termid":"PBO:0040252"}


id: FYECO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in a medium containing zinc sulfate","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zinc sulfate","synonyms":[{"name":"+ zinc sulphate","type":"exact"}],"termid":"FYECO:0000404"}


id: PBO:0073065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 3","termid":"PBO:0073065"}


id: PBO:0030809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_horsetail_movement","termid":"PBO:0030809"}


id: PBO:0073838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 14","termid":"PBO:0073838"}


id: SO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structure consisting of a 7-methylguanosine in 5'-5' triphosphate linkage with the first nucleotide of an mRNA. It is added post-transcriptionally, and is not encoded in the DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap","secondary_identifiers":["http://en.wikipedia.org/wiki/5%27_cap"],"termid":"SO:0000581"}


id: PBO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Atg22","termid":"PBO:0000621"}


id: PBO:0071008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 10","termid":"PBO:0071008"}


id: PBO:0059361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 7","termid":"PBO:0059361"}


id: PBO:0089928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER DNAJ domain protein Erj5","termid":"PBO:0089928"}


id: PBO:0071827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 22","termid":"PBO:0071827"}


id: GO:1901795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["PMID:10537203","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate biosynthetic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate anabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate biosynthesis","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate formation","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate synthesis","type":"exact"}],"termid":"GO:1901795"}


id: PBO:0071072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 74","termid":"PBO:0071072"}


id: GO:0035234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death of an errant germ line cell that is outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo.","definition_xrefs":["PMID:12814944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectopic germ cell programmed cell death","synonyms":[{"name":"programmed cell death of ectopic germ cells","type":"exact"},{"name":"programmed cell death, ectopic germ cells","type":"exact"}],"termid":"GO:0035234"}


id: PBO:0065447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 4","termid":"PBO:0065447"}


id: PBO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucan synthase Ags1","termid":"PBO:0015268"}


id: PBO:0081458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 324B","termid":"PBO:0081458"}


id: GO:0034755
data:
  {"annotated_genes":["SJAG_01007","SJAG_04867","SJAG_04737","SJAG_02968","SJAG_04743","SJAG_02457","SJAG_02735","SJAG_02473","SJAG_02834","SJAG_04260","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60735,88550,91429,99877,108850,109273],"is_not":false,"summary":null,"term":"GO:0034755"},{"annotations":[96565,109855,94180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[85411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[61568,61324,106845,106846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","PMID:11390404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"iron ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1903874","GO:0006827","GO:0000040","GO:0061839"],"synonyms":[{"name":"ferrous ion transmembrane transport","type":"narrow"},{"name":"ferrous iron transmembrane transport","type":"narrow"},{"name":"high affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high affinity iron ion transport","type":"narrow"},{"name":"high-affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transport","type":"narrow"},{"name":"iron ion membrane transport","type":"exact"},{"name":"iron(2+) transmembrane transport","type":"narrow"},{"name":"low affinity iron ion transport","type":"narrow"},{"name":"low-affinity iron ion transmembrane transport","type":"narrow"},{"name":"low-affinity iron ion transport","type":"narrow"},{"name":"transmembrane iron transport","type":"exact"}],"termid":"GO:0034755","terms_by_termid":{"GO:0034755":null,"GO:0044718":null,"GO:0048250":null,"GO:0140466":null}}


id: PBO:0017492
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_inferred","termid":"PBO:0017492"}


id: GO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a cell junction in a stable functional or structural state. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"},{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction maintenance","termid":"GO:0034331"}


id: GO:1903373
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63972],"is_not":false,"summary":null,"term":"GO:1903373"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum tubular network organization.","definition_xrefs":["PMID:24891604","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum tubular network organization","termid":"GO:1903371"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum tubular network organization","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of ER tubular network organisation","type":"narrow"},{"name":"activation of ER tubular network organization","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organisation","type":"narrow"},{"name":"activation of endoplasmic reticulum tubular network organization","type":"narrow"},{"name":"positive regulation of ER tubular network organisation","type":"exact"},{"name":"positive regulation of ER tubular network organization","type":"exact"},{"name":"positive regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organisation","type":"exact"},{"name":"up regulation of ER tubular network organization","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"up-regulation of ER tubular network organisation","type":"exact"},{"name":"up-regulation of ER tubular network organization","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"up-regulation of endoplasmic reticulum tubular network organization","type":"exact"},{"name":"upregulation of ER tubular network organisation","type":"exact"},{"name":"upregulation of ER tubular network organization","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organisation","type":"exact"},{"name":"upregulation of endoplasmic reticulum tubular network organization","type":"exact"}],"termid":"GO:1903373","terms_by_termid":{"GO:1903373":null}}


id: GO:0035133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the caudal fin are generated and organized. The caudal fin is an unpaired medial fin mounted at the caudal end of the fish and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"caudal fin morphogenesis","termid":"GO:0035143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic caudal fin morphogenesis","termid":"GO:0035133"}


id: GO:0021575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain morphogenesis","synonyms":[{"name":"rhombencephalon morphogenesis","type":"related"}],"termid":"GO:0021575"}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: PBO:0074225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 4","termid":"PBO:0074225"}


id: PBO:0070574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 40","termid":"PBO:0070574"}


id: GO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-threonine to form peptidyl-O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["RESID:AA0267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine adenylylation","synonyms":[{"name":"peptidyl-threonine adenylation","type":"exact"}],"termid":"GO:0018178"}


id: PBO:0043311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4","termid":"PBO:0043311"}


id: PBO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 8","termid":"PBO:0070855"}


id: GO:0034892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: endosulfan lactone + H2O = endosulfan hydroxycarboxylate + H+.","definition_xrefs":["UM-BBD_reactionID:r1389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"endosulfan lactone lactonase activity","termid":"GO:0034892"}


id: GO:0032831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0032829"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"positive regulation of regulatory T cell differentiation","termid":"GO:0045591"},{"relation_name":"positively_regulates","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"activation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"narrow"},{"name":"up regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"up-regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"},{"name":"upregulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","type":"exact"}],"termid":"GO:0032831"}


id: PBO:0073839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC7A14 antisense RNA 1","termid":"PBO:0073839"}


id: PBO:0060322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IB","termid":"PBO:0060322"}


id: _global:increased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a greater extent than in a preceding phase or process, where the experiment does not distinguish between increased addition and decreased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_during","termid":"_global:increased_during"}


id: GO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol metabolic process","termid":"GO:0072390"}


id: PBO:0064538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin B (pseudogene)","termid":"PBO:0064538"}


id: PBO:0026906
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_swollen_binucleate_multiseptate_cell_with_central_constriction","termid":"PBO:0026906"}


id: GO:1902625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of induction of conjugation with cellular fusion.","definition_xrefs":["PMID:9671458","GOC:TermGenie","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1902625)","termid":"GO:1902625"}


id: PR:P36630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin-B2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cig2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.03","secondary_identifiers":["UniProtKB:P36630"],"synonyms":[{"name":"Spom972h-CCNB2","type":"exact"}],"termid":"PR:P36630"}


id: PBO:0081905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 862","termid":"PBO:0081905"}


id: GO:1903500
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98449],"is_not":false,"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:18256290","GOC:mtg_cell_cycle","GO_REF:0000058","GOC:TermGenie","GOC:vw","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinetic process","termid":"GO:1903437"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903499"},{"relation_name":"is_a","term_name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000432"},{"relation_name":"negatively_regulates","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000281","GO:0044085","GO:0007049","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"negative regulation of mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"down regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"down-regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"downregulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"inhibition of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"narrow"},{"name":"inhibition of contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"negative regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"negative regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903500","terms_by_termid":{"GO:1903500":null}}


id: GO:0031165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of gene products that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:pg","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of contractile vacuolar membrane (obsolete GO:0031165)","synonyms":[{"name":"integral to contractile vacuolar membrane","type":"exact"}],"termid":"GO:0031165"}


id: PBO:0085628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress; acts along with Bol3 at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to client proteins; Fe-S loaded homodimer at steady state; similar to NifU, a bacterial protein required for Fe/S cluster maturation; ortholog of the human NFU1, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS1)","termid":"PBO:0085628"}


id: PBO:0073993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3","termid":"PBO:0073993"}


id: PBO:0066116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like family 10 member B","termid":"PBO:0066116"}


id: GO:0045656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of monocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of monocyte differentiation","termid":"GO:0045655"},{"relation_name":"negatively_regulates","term_name":"monocyte differentiation","termid":"GO:0030224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte differentiation","synonyms":[{"name":"down regulation of monocyte differentiation","type":"exact"},{"name":"down-regulation of monocyte differentiation","type":"exact"},{"name":"downregulation of monocyte differentiation","type":"exact"},{"name":"inhibition of monocyte differentiation","type":"narrow"}],"termid":"GO:0045656"}


id: GO:0140517
data:
  {"annotated_genes":["SJAG_00943","SJAG_04601","SJAG_03629","SJAG_04959","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97990,100377,104164,114133,114134],"is_not":false,"summary":null,"term":"GO:0140517"},{"annotations":[114130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990247"},{"annotations":[93336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180014"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together another protein and an RNA, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:24470144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02622":null,"SJAG_03629":null,"SJAG_04601":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140517","terms_by_termid":{"GO:0140517":null,"GO:0180014":null,"GO:1990247":null}}


id: GO:0009013
data:
  {"annotated_genes":["SJAG_03293","SJAG_00674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83602,84579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[83603,84580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate semialdehyde + NAD(P)+ + H2O = succinate + NAD(P)H + H+.","definition_xrefs":["EC:1.2.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_03293":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r0371"],"synonyms":[{"name":"succinate semialdehyde dehydrogenase (nicotinamide adenine dinucleotide (phosphate))","type":"related"},{"name":"succinate-semialdehyde:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0009013","terms_by_termid":{"GO:0004777":null,"GO:0036243":null}}


id: PBO:0079431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1","termid":"PBO:0079431"}


id: GO:0009305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of biotin (vitamin B7 / vitamin H) to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biotinylation (obsolete GO:0009305)","synonyms":[{"name":"protein amino acid biotinylation","type":"exact"}],"termid":"GO:0009305"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: PBO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi-mediated heterochromatin assembly helicase Hrr1","termid":"PBO:0090011"}


id: GO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a natriuretic peptide and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"natriuretic peptide receptor activity","termid":"GO:0016941"}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: PBO:0087426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the vacuolar-ATPase V0 domain; encodes one of two isoforms, located in vacuolar V-ATPase complexes while STV1 encodes the second isoform and is located in Golgi and endosomal V-ATPase complexes; interaction with PI(3,5)P2 increases V-ATPase activity and contributes to hyperosmotic stress tolerance; relative distribution to the vacuolar membrane decreases upon DNA replication stress; human homolog ATP6V0A4 implicated in renal tubular acidosis, can complement yeast null mutant","termid":"PBO:0087426"}


id: PBO:0065523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 3","termid":"PBO:0065523"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["UniProtKB:Q9UTR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: GO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of heavy chain immunoglobulin and T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the immune receptor gene.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"}


id: GO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a transmembrane receptor protein tyrosine kinase and one or more other molecules, permitting them to function in a coordinated way.","definition_xrefs":["GOC:mtg_MIT_16mar07","PMID:10502414","PMID:20565848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"},{"relation_name":"is_a","term_name":"receptor tyrosine kinase binding","termid":"GO:0030971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase adaptor activity","secondary_identifiers":["GO:0005069"],"synonyms":[{"name":"transmembrane receptor protein tyrosine kinase adaptor protein activity","type":"exact"},{"name":"transmembrane receptor protein tyrosine kinase docking protein activity","type":"related"}],"termid":"GO:0005068"}


id: PBO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter family","termid":"PBO:0001765"}


id: RO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. ","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_postsynaptic_terminal_in","termid":"RO:0002110"}


id: PBO:0084521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex that mediates export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; primary component of the Chs5/6 complex that binds directly to membranes; CHS6 has a paralog, BCH2, that arose from the whole genome duplication","termid":"PBO:0084521"}


id: _global:produces
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a produces b if some process that occurs_in a has_output b, where a and b are material entities. Examples: hybridoma cell line produces monoclonal antibody reagent; chondroblast produces avascular GAG-rich matrix.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produces","secondary_identifiers":["RO:0003000"],"termid":"_global:produces"}


id: GO:1903046
data:
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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1903046","terms_by_termid":{"GO:0000212":null,"GO:0000706":null,"GO:0000707":null,"GO:0000708":null,"GO:0000709":null,"GO:0000710":null,"GO:0000712":null,"GO:0006279":null,"GO:0006311":null,"GO:0007127":null,"GO:0007129":null,"GO:0007131":null,"GO:0007135":null,"GO:0010032":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0030437":null,"GO:0030476":null,"GO:0030989":null,"GO:0030999":null,"GO:0031321":null,"GO:0031322":null,"GO:0031619":null,"GO:0032118":null,"GO:0032120":null,"GO:0032121":null,"GO:0033315":null,"GO:0033316":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0040020":null,"GO:0042138":null,"GO:0044778":null,"GO:0044821":null,"GO:0045128":null,"GO:0045132":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0051232":null,"GO:0051307":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0051598":null,"GO:0051755":null,"GO:0061982":null,"GO:0062123":null,"GO:0062209":null,"GO:0070197":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090306":null,"GO:0110031":null,"GO:0110032":null,"GO:0140013":null,"GO:0140456":null,"GO:0140642":null,"GO:0140748":null,"GO:1901993":null,"GO:1902103":null,"GO:1902346":null,"GO:1902441":null,"GO:1903024":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990395":null,"GO:1990571":null,"GO:1990813":null,"GO:1990918":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: PBO:0091032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop12","termid":"PBO:0091032"}


id: PBO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STErile","termid":"PBO:0000524"}


id: GO:0015770
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sucrose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015770","terms_by_termid":{"GO:0106082":null}}


id: PBO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase Tal1","termid":"PBO:0090602"}


id: SO:1000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant effect, causing an intron to be gained by the processed transcript; usually a result of a donor acceptor mutation (SO:1000072).","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000185 sequence_variant_causes_intron_gain (obsolete SO:1000185)","synonyms":[{"name":"mutation causes intron gain","type":"related"},{"name":"sequence variant causes intron gain","type":"exact"}],"termid":"SO:1000185"}


id: GO:0005551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin (obsolete GO:0005551)","termid":"GO:0005551"}


id: PR:O94386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tri1 gene.","definition_xrefs":["UniProtKB:O94386","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.09c","synonyms":[{"name":"Spom972h-tri1","type":"exact"}],"termid":"PR:O94386"}


id: PBO:0000070
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"warning":[{"annotations":[56051],"is_not":false,"summary":null,"term":"PBO:0000070"}]},"cv_name":"warning","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"gene structure updated","termid":"PBO:0000070","terms_by_termid":{"PBO:0000070":null}}


id: GO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-soluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["GOC:dph","GOC:tb","PMID:18046696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk plasma","termid":"GO:0060418"}


id: GO:0097522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed through interaction of the protein(s) with an interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:cjm","PMID:11747630","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-DNA ISRE complex","termid":"GO:0097522"}


id: PBO:0043138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 6","termid":"PBO:0043138"}


id: PBO:0052243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 13","termid":"PBO:0052243"}


id: PBO:0028898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_pear-shaped_vegetative_cell","termid":"PBO:0028898"}


id: FYPO:0006092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized more towards the end of the cell, with fewer patches in the lateral cortex, than normal.","definition_xrefs":["PMID:20705471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches during vegetative growth","termid":"FYPO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"polarized actin cortical patch localization during vegetative growth","synonyms":[{"name":"polarised actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"polarized F-actin patch localization during vegetative growth","type":"exact"},{"name":"polarized actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"polarized actin cortical patch location during vegetative growth","type":"related"},{"name":"polarized actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0006092"}


id: PBO:0048620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 1","termid":"PBO:0048620"}


id: PATO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000565 volume value (obsolete PATO:0000565)","termid":"PATO:0000565"}


id: PBO:0083163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene SSB1","termid":"PBO:0083163"}


id: PBO:0073381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET nuclear proto-oncogene","termid":"PBO:0073381"}


id: PBO:0091185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F0 subunit 9","termid":"PBO:0091185"}


id: PBO:0083345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene DAD4/YDR320C-A","termid":"PBO:0083345"}


id: GO:0140976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular processes and signaling pathways by which a cell responds to disruption of the integrity of its plasma membrane by another organism. Some toxins produced by other organisms can form pores in membranes, or affect the membrane permeability.","definition_xrefs":["PMID:17234446","PMID:21518219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response against perturbation of plasma membrane integrity","synonyms":[{"name":"defense response against disruption of plasma membrane integrity","type":"exact"}],"termid":"GO:0140976"}


id: MOD:00234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glutathionyl-L-cysteine.","definition_xrefs":["PubMed:3083866","OMSSA:51","DeltaMass:0","RESID:AA0229","PubMed:8344916","Unimod:55","ChEBI:21264"],"direct_ancestors":[{"relation_name":"contains","term_name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine glutathione disulfide","synonyms":[{"name":"(2S)-2-amino-3-((2S)-2-((4R)-4-amino-4-carboxyl-1-oxobutyl)amino-3-(carboxylmethyl)amino-3-oxo-propyl)dithio-propanoic acid","type":"exact"},{"name":"Glutathionation","type":"exact"},{"name":"Glutathione","type":"related"},{"name":"L-cysteine glutathione disulfide","type":"exact"},{"name":"L-gamma-glutamyl-L-cysteinyl-glycine (2-1')-disulfide with L-cysteine","type":"exact"},{"name":"MOD_RES S-glutathionyl cysteine","type":"exact"},{"name":"N-(N-gamma-glutamyl-cystinyl)-glycine","type":"exact"},{"name":"SGltCys","type":"exact"},{"name":"cysteinyl glutathione","type":"exact"},{"name":"glutathione disulfide","type":"related"},{"name":"glutathionec","type":"exact"}],"termid":"MOD:00234"}


id: PATO:0002465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling a prism.","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prism shaped","synonyms":[{"name":"tent shaped","type":"related"}],"termid":"PATO:0002465"}


id: PBO:0068510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 100, pseudogene","termid":"PBO:0068510"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: PBO:0086915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc cluster protein, predicted to be a transcription factor; not an essential gene; EDS1 has a paralog, RGT1, that arose from the whole genome duplication","termid":"PBO:0086915"}


id: GO:2000863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"positively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of estrogen secretion","synonyms":[{"name":"positive regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000863"}


id: PBO:0085266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxin required for peroxisomal matrix protein targeting; acts on proteins containing the PTS2 targeting sequence; interacts with Pex7p; constitutively expressed; partially redundant with Pex18p; required for import of the Gpd1p-Pnc1p heterodimer in which only Gpd1p has a peroxisomal targeting signal; relative distribution to cytoplasmic foci increases upon DNA replication stress","termid":"PBO:0085266"}


id: FYPO:0004291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at GT dinucleotide microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microsatellite DNA binding","termid":"FYPO:0004290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"decreased GT microsatellite DNA binding","synonyms":[{"name":"decreased GT dinucleotide microsatellite repeat binding","type":"exact"},{"name":"decreased microsatellite (GT) DNA binding","type":"exact"},{"name":"reduced GT microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004291"}


id: GO:0021756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the striatum over time from its initial formation until its mature state. The striatum is a region of the forebrain consisting of the caudate nucleus, putamen and fundus striati.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0878937420","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatum development","synonyms":[{"name":"neostriatum development","type":"exact"},{"name":"striate nucleus development","type":"exact"}],"termid":"GO:0021756"}


id: GO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from endodermal cells to mesodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endodermal-mesodermal cell signaling","synonyms":[{"name":"endodermal-mesodermal cell signalling","type":"exact"}],"termid":"GO:0003133"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: PBO:0085410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane regulator of polyamine and carnitine transport; has similarity to transporters but lacks transport activity; may act as a sensor that transduces environmental signals; has a positive or negative regulatory effect on transcription of many transporter genes","termid":"PBO:0085410"}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["EC:3.3.2.7","MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2161949","RHEA:16665"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: GO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell tolerance induction","termid":"GO:0002666"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell anergy","synonyms":[{"name":"activation of T cell anergy","type":"narrow"},{"name":"positive regulation of T lymphocyte anergy","type":"exact"},{"name":"positive regulation of T-cell anergy","type":"exact"},{"name":"positive regulation of T-lymphocyte anergy","type":"exact"},{"name":"stimulation of T cell anergy","type":"narrow"},{"name":"up regulation of T cell anergy","type":"exact"},{"name":"up-regulation of T cell anergy","type":"exact"},{"name":"upregulation of T cell anergy","type":"exact"}],"termid":"GO:0002669"}


id: PBO:0086738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; partial duplicate of RSC30/YHR056C, truncated remnant of segmental duplication","termid":"PBO:0086738"}


id: PBO:0077342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 81","termid":"PBO:0077342"}


id: GO:1990173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nucleoplasm.","definition_xrefs":["PMID:22918952","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleoplasm","secondary_identifiers":["GO:0032066"],"synonyms":[{"name":"nucleolus to nucleoplasm transport","type":"related"},{"name":"protein localisation to nucleoplasm","type":"exact"}],"termid":"GO:1990173"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: GO:0140644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular microbicidal structure composed of nuclear chromatin, histones and granular antimicrobial proteins. Histones and several neutrophil granule proteins associated with the DNA framework damage entrapped microorganisms.","definition_xrefs":["PMID:31172493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular non-membrane-bounded organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"neutrophil extracellular trap","synonyms":[{"name":"NET","type":"broad"}],"termid":"GO:0140644"}


id: GO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate that oskar mRNAs are effectively translated into protein.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of oskar mRNA translation","termid":"GO:0046011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oskar mRNA translation","synonyms":[{"name":"down regulation of oskar mRNA translation","type":"exact"},{"name":"down-regulation of oskar mRNA translation","type":"exact"},{"name":"downregulation of oskar mRNA translation","type":"exact"},{"name":"inhibition of oskar mRNA translation","type":"narrow"}],"termid":"GO:0007319"}


id: GO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process.","definition_xrefs":["PMID:18217203","PMID:9299409","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing GTP as source of linkage phosphate (obsolete GO:0000970)","termid":"GO:0000970"}


id: PBO:0029292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029292"}


id: GO:0035670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ovary that produces an ovule over time, from its formation to the mature structure. The ovary is the enlarged basal portion of a carpel and matures into a fruit. An ovule is the multicellular structure that gives rise to and contains the female reproductive cells, and develops into a seed.","definition_xrefs":["GOC:tb","ISBN:0879015322","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type ovary development","termid":"GO:0035670"}


id: GO:2000195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gonad development","termid":"GO:1905940"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"negatively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female gonad development","synonyms":[{"name":"negative regulation of ovarian development","type":"exact"},{"name":"negative regulation of ovary development","type":"exact"}],"termid":"GO:2000195"}


id: PBO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 1","termid":"PBO:0061040"}


id: GO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052203)","synonyms":[{"name":"modulation of enzyme activity within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052203"}


id: PBO:0005345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sed5 Vesicle Protein Svp26 (predicted)","termid":"PBO:0005345"}


id: GO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte activation","termid":"GO:0051249"}


id: PR:O14127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac12 gene.","definition_xrefs":["UniProtKB:O14127","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3C7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.01c","synonyms":[{"name":"Spom972h-sac12","type":"exact"}],"termid":"PR:O14127"}


id: PBO:0049136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein pathway suppressor 2 pseudogene 2","termid":"PBO:0049136"}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of tissue in another organism","termid":"GO:0141062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermonecrosis in another organism","termid":"GO:0141123"}


id: PBO:0055862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP8 divergent transcript","termid":"PBO:0055862"}


id: PBO:0004540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog","termid":"PBO:0004540"}


id: FYPO:0005174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished uracil import","synonyms":[{"name":"abolished uracil import across plasma membrane","type":"exact"},{"name":"abolished uracil import during mitotic cell cycle","type":"related"},{"name":"abolished uracil import during vegetative growth","type":"exact"},{"name":"abolished uracil import into cell","type":"exact"},{"name":"abolished uracil uptake","type":"exact"},{"name":"uracil import abolished","type":"exact"}],"termid":"FYPO:0005174"}


id: PBO:0063094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator","termid":"PBO:0063094"}


id: GO:0046464
data:
  {"annotated_genes":["SJAG_02089","SJAG_03604","SJAG_02543","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77296],"is_not":false,"summary":null,"term":"GO:0046464"},{"annotations":[90138,113603,87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"},{"relation_name":"is_a","term_name":"neutral lipid catabolic process","termid":"GO:0046461"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol breakdown","type":"exact"},{"name":"acylglycerol catabolism","type":"exact"},{"name":"acylglycerol degradation","type":"exact"}],"termid":"GO:0046464","terms_by_termid":{"GO:0019433":null,"GO:0046464":null}}


id: PBO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog","termid":"PBO:0070430"}


id: PBO:0063536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing ring finger 4","termid":"PBO:0063536"}


id: PBO:0085969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; YOL036W has a paralog, YIR016W, that arose from the whole genome duplication","termid":"PBO:0085969"}


id: GO:0045931
data:
  {"annotated_genes":["SJAG_02169","SJAG_02723","SJAG_03695","SJAG_03699","SJAG_04332","SJAG_01210","SJAG_01000","SJAG_00216","SJAG_01825","SJAG_04259","SJAG_03371","SJAG_03309","SJAG_04140","SJAG_02342","SJAG_01901","SJAG_04597","SJAG_03486","SJAG_01837","SJAG_03592","SJAG_00117","SJAG_02336","SJAG_01801","SJAG_02074","SJAG_01679","SJAG_03126","SJAG_03067","SJAG_03602","SJAG_02451","SJAG_01456","SJAG_00256","SJAG_00666","SJAG_01297","SJAG_01805","SJAG_00082","SJAG_04968","SJAG_04573","SJAG_02498","SJAG_02404","SJAG_03591","SJAG_00883","SJAG_01401","SJAG_03353","SJAG_02592","SJAG_04813","SJAG_04486","SJAG_00214","SJAG_03681","SJAG_02332","SJAG_01311","SJAG_03160","SJAG_02380","SJAG_00457","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110323,103296,108017,95668,104318,109845,86847,99971,111948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[105329,101863,100510,102024,114372,98445,102710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[90300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[108095,113304,99402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98455,108019,86129,89854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[101867,97700,113106,102717,102025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[88239,90642,112722,94529,90472,95084,90511,103299,89905,104638,84208,87834,106407,107260,97837,92424,84217,99570,112534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[84014,97460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[98460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[96215,93796,98188,110821,98462,89908,107431,110324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[107491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[104958,111952,111384,87846,102028,97702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00457":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04813":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of progression through mitotic cell cycle","type":"narrow"},{"name":"positive regulation of mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through mitotic cell cycle","type":"exact"}],"termid":"GO:0045931","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0110045":null,"GO:0110161":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1903465":null,"GO:1903468":null,"GO:1905287":null}}


id: GO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell.","definition_xrefs":["PMID:18267954","GOC:sl","PMID:16151017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation","synonyms":[{"name":"VSMC differentiation","type":"exact"},{"name":"vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035886"}


id: PBO:0111829
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0111829"}


id: PBO:0086519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; overlaps ORF YLR235C","termid":"PBO:0086519"}


id: GO:0006077
data:
  {"annotated_genes":["SJAG_00771","SJAG_04073","SJAG_02446","SJAG_02590"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90316,98535,112596,86721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->6)-beta-D-glucans, compounds composed of glucose residues linked by (1->6)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00771":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,6-beta-glucan metabolic process","type":"exact"},{"name":"1,6-beta-glucan metabolism","type":"exact"},{"name":"beta-1,6 glucan metabolic process","type":"exact"},{"name":"beta-1,6 glucan metabolism","type":"exact"}],"termid":"GO:0006077","terms_by_termid":{"GO:0006078":null}}


id: SOFP:organism
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The name of the organism","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organism","termid":"SOFP:organism"}


id: PR:Q9UTG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2602 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.11c","synonyms":[{"name":"Spom972h-rps2602","type":"exact"}],"termid":"PR:Q9UTG4"}


id: PBO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2 (predicted)","termid":"PBO:0003953"}


id: GO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD80 biosynthetic process","synonyms":[{"name":"CD80 anabolism","type":"exact"},{"name":"CD80 biosynthesis","type":"exact"},{"name":"CD80 formation","type":"exact"},{"name":"CD80 synthesis","type":"exact"}],"termid":"GO:0035780"}


id: PBO:0028358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_sister_chromatid_separation","termid":"PBO:0028358"}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: GO:0097112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which gamma-aminobutyric acid (GABA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:15620359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"},{"relation_name":"part_of","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"gamma-aminobutyric acid receptor clustering","synonyms":[{"name":"GABA receptor clustering","type":"exact"}],"termid":"GO:0097112"}


id: GO:0019403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactitol biosynthetic process","synonyms":[{"name":"galactitol anabolism","type":"exact"},{"name":"galactitol biosynthesis","type":"exact"},{"name":"galactitol formation","type":"exact"},{"name":"galactitol synthesis","type":"exact"}],"termid":"GO:0019403"}


id: PBO:0108574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0108574"}


id: PBO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2 (predicted)","termid":"PBO:0000990"}


id: GO:0098568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the mycolate outer membrane that faces the environment and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos","PMID:18567661","PMID:18316738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external side of mycolate outer membrane","termid":"GO:0098568"}


id: GO:1904386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["PMID:12112407","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-phenylalanine derivative","termid":"GO:1904386"}


id: GO:0032446
data:
  {"annotated_genes":["SJAG_01018","SJAG_03950","SJAG_01776","SJAG_00033","SJAG_01985","SJAG_00727","SJAG_03616","SJAG_02503","SJAG_05297","SJAG_05032","SJAG_03932","SJAG_02082","SJAG_00878","SJAG_00615","SJAG_03896","SJAG_03843","SJAG_01302","SJAG_00604"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57422],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033234"},{"annotations":[114402,98950,108377,90701,92585,85385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[85887,110696,105623,93857,85728,92304,100542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[113224,104473,101911,92094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00727":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_01985":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_03950":null,"SJAG_05032":null,"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0032446","terms_by_termid":{"GO:0016925":null,"GO:0032447":null,"GO:0033234":null,"GO:0045116":null}}


id: FYPO:0003443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move less frequently, and over shorter distances, than normal. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PMID:24798735","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"decreased medial cortical node movement during contractile ring assembly","synonyms":[{"name":"decreased medial cortical node movement during actomyosin contractile ring assembly","type":"exact"},{"name":"decreased medial cortical node movement during contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased medial cortical node movement during contractile ring assembly during vegetative growth","type":"exact"},{"name":"reduced medial cortical node movement during contractile ring assembly","type":"exact"}],"termid":"FYPO:0003443"}


id: PBO:0054155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1522","termid":"PBO:0054155"}


id: GO:0099021
data:
  {"annotated_genes":["SJAG_00790"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89182],"is_not":false,"summary":null,"term":"GO:0099021"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the cortical endoplasmic reticulum.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"cortical endoplasmic reticulum","termid":"GO:0032541"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"cortical endoplasmic reticulum lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099021","terms_by_termid":{"GO:0099021":null}}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: PBO:0062729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 3 pseudogene","termid":"PBO:0062729"}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["UniProtKB:Q9Y7P6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: PATO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer by virtue of the bearer's condition before death.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alive","termid":"PATO:0001421"}


id: PR:O94460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A queuine tRNA-ribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11962:SF0","OMA:SCHPO00369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.19c","secondary_identifiers":["UniProtKB:O94460"],"synonyms":[{"name":"Spom972h-QTRT1","type":"exact"},{"name":"guanine insertion enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-guanine transglycosylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94460"}


id: PBO:0068467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 44, pseudogene","termid":"PBO:0068467"}


id: GO:0036201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-isokaurene + O2 + NADPH + H+ = ent-2alpha-hydroxyisokaurene + H2O + NADP+.","definition_xrefs":["EC:1.14.14.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-isokaurene C2-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R09861","RHEA:56336"],"termid":"GO:0036201"}


id: GO:0047956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NADP+ = D-glyceraldehyde + NADPH.","definition_xrefs":["RHEA:23592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol dehydrogenase [NAD(P)+] activity","termid":"GO:1990042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerol dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.72","MetaCyc:GLYCEROL-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"glycerol dehydrogenase [NADP+] activity","type":"related"},{"name":"glycerol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047956"}


id: GO:1901036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of L-glutamine import across plasma membrane","termid":"GO:1901034"},{"relation_name":"is_a","term_name":"positive regulation of glutamine transport","termid":"GO:2000487"},{"relation_name":"positively_regulates","term_name":"L-glutamine import across plasma membrane","termid":"GO:1903803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-glutamine import across plasma membrane","synonyms":[{"name":"activation of L-glutamine import","type":"narrow"},{"name":"activation of L-glutamine uptake","type":"exact"},{"name":"positive regulation of L-glutamine import","type":"broad"},{"name":"positive regulation of L-glutamine uptake","type":"exact"},{"name":"up regulation of L-glutamine import","type":"exact"},{"name":"up regulation of L-glutamine uptake","type":"exact"},{"name":"up-regulation of L-glutamine import","type":"exact"},{"name":"up-regulation of L-glutamine uptake","type":"exact"},{"name":"upregulation of L-glutamine import","type":"exact"},{"name":"upregulation of L-glutamine uptake","type":"exact"}],"termid":"GO:1901036"}


id: GO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.","definition_xrefs":["PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-4 receptor complex","synonyms":[{"name":"IL-4 receptor complex","type":"exact"}],"termid":"GO:0016516"}


id: PBO:0052026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 4","termid":"PBO:0052026"}


id: GO:0043231
data:
  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