# terms

id: GO:0061524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of the central canal of the spinal cord from its formation to the mature structure. The central canal is a spinal cord structure that is part of the ventricular system and is filled with cerebral-spinal fluid and runs the length of the spinal cord.","definition_xrefs":["GOC:dph","GOC:cvs","PMID:23409159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central canal development","termid":"GO:0061524"}


id: GO:2000888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an arabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinoxylan-containing compound metabolic process","termid":"GO:0010416"},{"relation_name":"is_a","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"arabinoxylan-containing compound catabolic process","synonyms":[{"name":"arabinoxylan catabolic process","type":"related"},{"name":"arabinoxylan catabolism","type":"related"}],"termid":"GO:2000888"}


id: PBO:0074063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39 pseudogene 1","termid":"PBO:0074063"}


id: PBO:0059329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 3","termid":"PBO:0059329"}


id: PBO:0071384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 7","termid":"PBO:0071384"}


id: GO:0014716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Skeletal muscle satellite cell asymmetric division that occurs during a process in which damaged muscle tissue is being rebuilt.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle satellite stem cell asymmetric division","termid":"GO:0014833"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","termid":"GO:0014834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite stem cell asymmetric division involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell asymmetric division involved in skeletal muscle regeneration","type":"exact"}],"termid":"GO:0014716"}


id: PBO:0057035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-1","termid":"PBO:0057035"}


id: GO:0009491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete redox-active disulfide bond electron carrier (obsolete GO:0009491)","synonyms":[{"name":"redox-active disulfide bond electron carrier","type":"exact"},{"name":"redox-active disulphide bond electron carrier","type":"exact"}],"termid":"GO:0009491"}


id: PBO:0091713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Saw1","termid":"PBO:0091713"}


id: GO:0033904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,6-alpha-D-glucosidic linkages in dextran.","definition_xrefs":["EC:3.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dextranase activity","secondary_identifiers":["MetaCyc:3.2.1.11-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan 6-glucanohydrolase activity","type":"related"},{"name":"DL 2","type":"related"},{"name":"alpha-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"alpha-D-1,6-glucan-6-glucanohydrolase activity","type":"related"},{"name":"dextran hydrolase activity","type":"related"},{"name":"dextranase DL 2 activity","type":"narrow"},{"name":"endo-dextranase activity","type":"related"},{"name":"endodextranase activity","type":"related"}],"termid":"GO:0033904"}


id: PBO:0071522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 25","termid":"PBO:0071522"}


id: PBO:0048505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDF5 antisense RNA 1","termid":"PBO:0048505"}


id: GO:0009916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidation of ubiquinol by diverting electrons from the standard electron transfer chain, transferring them from ubiquinol to oxygen and generating water as the product.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alternative oxidase activity","termid":"GO:0009916"}


id: PBO:0053743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 970","termid":"PBO:0053743"}


id: PBO:0082553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore protein and subunit of the Ctf19 complex; mutants have elevated rates of chromosome loss; orthologous to fission yeast kinetochore protein fta4","termid":"PBO:0082553"}


id: GO:1905236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["PMID:24914722","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to quercetin","termid":"GO:1905235"},{"relation_name":"is_a","term_name":"cellular response to flavonoid","termid":"GO:1905396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to quercetin","termid":"GO:1905236"}


id: FYPO:0006765
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}


id: PBO:0085807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; ECM18 has a paralog, ICT1, that arose from the whole genome duplication","termid":"PBO:0085807"}


id: GO:0002100
data:
  {"annotated_genes":["SJAG_00352","SJAG_04189","SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97189,100026,100312],"is_not":false,"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"The process in which an adenosine in position 34 of a tRNA is post-transcriptionally converted to inosine.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"},{"relation_name":"is_a","term_name":"adenosine to inosine editing","termid":"GO:0006382"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble adenosine to inosine editing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002100","terms_by_termid":{"GO:0002100":null}}


id: PATO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has extra parts of type","secondary_identifiers":["PATO:0001560"],"synonyms":[{"name":"has extra parts of","type":"exact"},{"name":"has increased number of","type":"exact"},{"name":"having extra physical parts","type":"exact"},{"name":"having supernumerary physical parts","type":"exact"},{"name":"increased number of","type":"exact"}],"termid":"PATO:0002002"}


id: GO:0009615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to virus","synonyms":[{"name":"response to viruses","type":"exact"}],"termid":"GO:0009615"}


id: GO:0008975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr16-Leu17 and Phe25-Tyr26 bonds of oxidized insulin B chain. Also acts on other substrates of Molecular weight less than 7 kDa such as insulin and glucagon.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pitrilysin activity (obsolete GO:0008975)","synonyms":[{"name":"Escherichia coli metalloproteinase Pi","type":"related"},{"name":"Escherichia coli protease III","type":"related"},{"name":"PTR","type":"related"},{"name":"pitrilysin activity","type":"exact"},{"name":"protease III activity","type":"related"},{"name":"protease Pi activity","type":"related"},{"name":"proteinase Pi","type":"related"}],"termid":"GO:0008975"}


id: FYPO:0000231
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115297],"is_not":false,"summary":null,"term":"FYPO:0000231"}],"single_locus_phenotype":[{"annotations":[115290],"is_not":false,"summary":null,"term":"FYPO:0000231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which myosin filaments are not localized normally within the actomyosin contractile ring.","definition_xrefs":["GO:2000708","PomBase:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_03596":null},"genotype_count":2,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_03596"],"name":"abnormal actomyosin contractile ring myosin filament organization","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_03596"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal actomyosin contractile ring myosin filament organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring myosin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring myosin filament organization during vegetative growth","type":"exact"},{"name":"abnormal cytokinetic contractile ring myosin filament organization","type":"exact"},{"name":"abnormal mitotic contractile ring myosin filament organization","type":"exact"},{"name":"cytokinesis defects, contractile ring myosin distribution, defective","type":"related"}],"termid":"FYPO:0000231","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000231":null,"FYPO_EXT:0000001":null}}


id: PBO:0077136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor protein","termid":"PBO:0077136"}


id: GO:1903693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic G1 cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15713656"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:1903693)","synonyms":[{"name":"regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:1903693"}


id: FYPO:0005646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the kinetochore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal kinetochore morphology","synonyms":[{"name":"abnormal kinetochore structure","type":"narrow"},{"name":"kinetochore defects","type":"exact"}],"termid":"FYPO:0005646"}


id: GO:0102479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + UDP-D-galactose = quercetin 3-O-beta-D-galactopyranoside + UDP(3-) + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"quercetin 3-O-beta:-D-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14109"],"termid":"GO:0102479"}


id: PR:O42662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA large subunit methyltransferase F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase-like protein C27D7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.08c","secondary_identifiers":["UniProtKB:O42662"],"synonyms":[{"name":"Spom972h-rlmF","type":"exact"}],"termid":"PR:O42662"}


id: FYPO:0009068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ciclopirox olamine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ciclopirox olamine","synonyms":[{"name":"resistance to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"resistance to ciclopirox olamine during vegetative growth","type":"exact"},{"name":"resistant to ciclopirox olamine","type":"exact"}],"termid":"FYPO:0009068"}


id: GO:1902418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (+)-abscisic acid D-glucopyranosyl este is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24028845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transport","synonyms":[{"name":"ABA-GE transmembrane transport","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transport","type":"exact"}],"termid":"GO:1902418"}


id: GO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by erythrocytes. The process often starts with binding of complement receptor 1 (CR1) on the surface of erythrocytes to a complement coated immune complex. The complex bound to erythrocyte CR1 is then transported to the liver or spleen where it is presented to phagocytes. The process ends when the complex is removed from CR1, allowing the erythrocyte to return to general circulation.","definition_xrefs":["PMID:11414352","GOC:add","PMID:24022490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by erythrocytes","secondary_identifiers":["Wikipedia:Immune_complex"],"synonyms":[{"name":"immune complex clearance by RBCs","type":"exact"},{"name":"immune complex clearance by red blood cells","type":"exact"}],"termid":"GO:0002435"}


id: MOD:01435
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue, a glutamic acid residue and the indole compound 2-carboxy-3-methyl-4-hydroxymethyl--indole.","definition_xrefs":["PubMed:893891","RESID:AA0488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","synonyms":[{"name":"2-([(1R)-1-amino-1-carboxyeth-2-yl]sulfanyl)carbonyl-3-methyl-4-([(1S)-1-amino-1-carboxy-4-oxobutan-4-yl]oxy)methyl-1H-indole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-4-[(glutam-5-yloxy)methyl]-3-methyl-1H-indole","type":"exact"},{"name":"BINDING 3-methyl-4-hydroxymethylindole-2-carboxylic acid (covalent; via 2 links)","type":"exact"}],"termid":"MOD:01435"}


id: GO:0008304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic translation initiation factor 4 complex (obsolete GO:0008304)","synonyms":[{"name":"eIF-4","type":"exact"},{"name":"eukaryotic translation initiation factor 4 complex","type":"exact"}],"termid":"GO:0008304"}


id: GO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A receptor found on the surface of natural killer cells which binds Class I MHC antigens and is required for activation of NK activity. It belongs to the Ly49i family.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete natural killer cell receptor activity (obsolete GO:0045233)","synonyms":[{"name":"Ly49i","type":"narrow"},{"name":"NK cell receptor activity","type":"exact"},{"name":"natural killer cell receptor activity","type":"exact"}],"termid":"GO:0045233"}


id: FYPO:0001316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal level of substance in cell during vegetative growth","synonyms":[{"name":"normal level of substance in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001316"}


id: GO:0034762
data:
  {"annotated_genes":["SJAG_04469","SJAG_03631","SJAG_04990","SJAG_03970","SJAG_00991","SJAG_05346","SJAG_00296","SJAG_04920","SJAG_04551","SJAG_02605","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87327,109422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[84250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[84251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[98225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[94965,106604,87842,89424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[94966,87843,89425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[95478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[102445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03631":null,"SJAG_03970":null,"SJAG_04469":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of membrane transport","type":"exact"}],"termid":"GO:0034762","terms_by_termid":{"GO:0035432":null,"GO:1902267":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000185":null}}


id: PBO:0088939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAS complex subunit, involved in phosphoinositide metabolism Vac14","termid":"PBO:0088939"}


id: PBO:0051292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-13","termid":"PBO:0051292"}


id: GO:0009756
data:
  {"annotated_genes":["SJAG_01699","SJAG_00472","SJAG_00424","SJAG_01245","SJAG_00610","SJAG_01754","SJAG_02311","SJAG_03081","SJAG_01254","SJAG_02444","SJAG_04312","SJAG_02481","SJAG_00266","SJAG_04551","SJAG_02426","SJAG_04026","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111572,101958,105078,97924,112611,102550,105588,102906,90328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[88192,96518,112433,104035,88849],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[85573,98223,98924],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of carbohydrate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"carbohydrate mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate mediated signalling","type":"exact"}],"termid":"GO:0009756","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: PBO:0076946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroglobulin","termid":"PBO:0076946"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: PR:Q9US33
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine acetyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02266","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.08","secondary_identifiers":["UniProtKB:Q9US33"],"synonyms":[{"name":"Spom972h-cysE","type":"exact"}],"termid":"PR:Q9US33"}


id: GO:1900559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of austinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"austinol metabolic process","termid":"GO:1900558"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol catabolic process","synonyms":[{"name":"austinol breakdown","type":"exact"},{"name":"austinol catabolism","type":"exact"},{"name":"austinol degradation","type":"exact"}],"termid":"GO:1900559"}


id: PBO:0088472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal glutamine amidohydrolase, alpha beta roll superfamily","termid":"PBO:0088472"}


id: PBO:0027258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_tRNA_genes","termid":"PBO:0027258"}


id: PBO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 63","termid":"PBO:0072533"}


id: PBO:0052666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 34","termid":"PBO:0052666"}


id: PBO:0057446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 564","termid":"PBO:0057446"}


id: FYPO:0000717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to actinomycin D. Cells stop growing (and may die) at a concentration of actinomycin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to actinomycin D","synonyms":[{"name":"hypersensitive to actinomycin D","type":"exact"},{"name":"sensitive to actinomycin D during mitotic cell cycle","type":"related"},{"name":"sensitive to actinomycin D during vegetative growth","type":"exact"}],"termid":"FYPO:0000717"}


id: GO:1905168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["PMID:12023299","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"activation of HDR","type":"narrow"},{"name":"activation of HRR","type":"narrow"},{"name":"activation of Rad51-dependent recombinational repair","type":"narrow"},{"name":"activation of Rhp51-dependent recombinational repair","type":"narrow"},{"name":"activation of double-strand break repair via homologous recombination","type":"narrow"},{"name":"activation of homologous recombinational repair","type":"narrow"},{"name":"activation of homology-directed repair","type":"narrow"},{"name":"positive regulation of HDR","type":"exact"},{"name":"positive regulation of HRR","type":"exact"},{"name":"positive regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of homologous recombinational repair","type":"exact"},{"name":"positive regulation of homology-directed repair","type":"exact"},{"name":"up regulation of HDR","type":"exact"},{"name":"up regulation of HRR","type":"exact"},{"name":"up regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up regulation of homologous recombinational repair","type":"exact"},{"name":"up regulation of homology-directed repair","type":"exact"},{"name":"up-regulation of HDR","type":"exact"},{"name":"up-regulation of HRR","type":"exact"},{"name":"up-regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of homologous recombinational repair","type":"exact"},{"name":"up-regulation of homology-directed repair","type":"exact"},{"name":"upregulation of HDR","type":"exact"},{"name":"upregulation of HRR","type":"exact"},{"name":"upregulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"upregulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"upregulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of homologous recombinational repair","type":"exact"},{"name":"upregulation of homology-directed repair","type":"exact"}],"termid":"GO:1905168"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: GO:1904375
data:
  {"annotated_genes":["SJAG_03602","SJAG_03970","SJAG_04597","SJAG_00030","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[91956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[94530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_02392":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904375","terms_by_termid":{"GO:0042997":null,"GO:0120047":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: GO:1903156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any guanine transmembrane transporter activity that is involved in guanine import into cell.","definition_xrefs":["GO_REF:0000061","GOC:dos","ISBN:0-8249-3695-6","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine transmembrane transporter activity involved in guanine import into cell (obsolete GO:1903156)","synonyms":[{"name":"guanine transmembrane transporter activity involved in guanine import into cell","type":"exact"}],"termid":"GO:1903156"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: PBO:0049892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 11","termid":"PBO:0049892"}


id: PBO:0002993
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Carboxyl Methyltransferase","termid":"PBO:0002993"}


id: PBO:0066097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS protein activator like 2","termid":"PBO:0066097"}


id: PBO:0080372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 1","termid":"PBO:0080372"}


id: PBO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA pseudogene 1","termid":"PBO:0044056"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: PR:Q9USM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein Luc7-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04492","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein usp106 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.13","secondary_identifiers":["UniProtKB:Q9USM4"],"synonyms":[{"name":"Spom972h-LUC7L","type":"exact"},{"name":"protein luc7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USM4"}


id: GO:0160025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sensory perception which causes the desire or reflex to scratch.","definition_xrefs":["PMID:26015312","Wikipedia:Itch","PMID:29723501","PMID:30734045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of itch","synonyms":[{"name":"pruritus","type":"exact"}],"termid":"GO:0160025"}


id: PBO:0029551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_elongated_cell","termid":"PBO:0029551"}


id: GO:0035495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SNARE complex disassembly","termid":"GO:0035495"}


id: PBO:0058185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4478","termid":"PBO:0058185"}


id: PBO:0059088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC1 antisense RNA 1","termid":"PBO:0059088"}


id: PBO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 23","termid":"PBO:0070524"}


id: GO:0007135
data:
  {"annotated_genes":["SJAG_04271","SJAG_00678","SJAG_04508","SJAG_00207","SJAG_03090","SJAG_00486","SJAG_00646","SJAG_03989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101177,102894,103790],"is_not":false,"summary":null,"term":"GO:0007135"},{"annotations":[84030,89933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[107741,109289,84164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"}]},"cv_name":"biological_process","definition":"The second nuclear division of meiosis, in which the two chromatids in each chromosome are separated, resulting in four daughter nuclei from the two nuclei produced in meiosis II.","definition_xrefs":["GOC:mah","ISBN:0198547684","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Meiosis#Meiosis_II"],"synonyms":[{"name":"meiosis II nuclear division","type":"exact"}],"termid":"GO:0007135","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null}}


id: GO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that inhibits protein phosphatase activity by directly binding to a protein phosphatase.","definition_xrefs":["PMID:19933100","PMID:19407142","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein phosphatase inhibitor complex","termid":"GO:0062049"}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: FYPO:0003739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a replication origin by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA replication origin binding","synonyms":[{"name":"decreased origin binding","type":"exact"},{"name":"reduced DNA replication origin binding","type":"exact"}],"termid":"FYPO:0003739"}


id: RO:HOM0000037
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.","definition_xrefs":["BGEE:curator"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_homology_relationship_with","synonyms":[{"name":"1 to many homologous to","type":"exact"},{"name":"1:many homology","type":"related"},{"name":"one-to-many homology","type":"exact"}],"termid":"RO:HOM0000037"}


id: PBO:0108890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 3","termid":"PBO:0108890"}


id: PBO:0056058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1","termid":"PBO:0056058"}


id: PBO:0081122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3H1-type containing","termid":"PBO:0081122"}


id: GO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"negatively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061914"}


id: PBO:0049096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 153","termid":"PBO:0049096"}


id: PBO:0067343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 440, pseudogene","termid":"PBO:0067343"}


id: PBO:0053139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6A","termid":"PBO:0053139"}


id: PBO:0083820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5","termid":"PBO:0083820"}


id: PBO:0041622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein, spermatid associated 1","termid":"PBO:0041622"}


id: PBO:0068339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 111","termid":"PBO:0068339"}


id: PBO:0079011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 5-1","termid":"PBO:0079011"}


id: GO:2000273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling receptor activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signaling receptor activity","synonyms":[{"name":"positive regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000273"}


id: GO:1901216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of neuron death (obsolete GO:1901216)","synonyms":[{"name":"activation of neuron cell death","type":"narrow"},{"name":"activation of neuron death","type":"narrow"},{"name":"activation of neuronal cell death","type":"narrow"},{"name":"positive regulation of neuron cell death","type":"exact"},{"name":"positive regulation of neuronal cell death","type":"exact"},{"name":"up regulation of neuron cell death","type":"exact"},{"name":"up regulation of neuron death","type":"exact"},{"name":"up regulation of neuronal cell death","type":"exact"},{"name":"up-regulation of neuron cell death","type":"exact"},{"name":"up-regulation of neuron death","type":"exact"},{"name":"up-regulation of neuronal cell death","type":"exact"},{"name":"upregulation of neuron cell death","type":"exact"},{"name":"upregulation of neuron death","type":"exact"},{"name":"upregulation of neuronal cell death","type":"exact"}],"termid":"GO:1901216"}


id: MOD:00793
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dehydroalanine.","definition_xrefs":["PubMed:8239649","Unimod:368","PubMed:7947813","RESID:AA0181#CYS","DeltaMass:8","PubMed:10220322","PubMed:1547888","ChEBI:17123","PubMed:1815586","PubMed:11212008","PubMed:15799070","PubMed:20805503","PubMed:2914619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Cys)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Cys->Dha","type":"related"},{"name":"Dehydroalanine (from Cysteine)","type":"exact"},{"name":"Dha","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Cys)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Cys)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00793"}


id: GO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"regulates","term_name":"chronic inflammatory response to antigenic stimulus","termid":"GO:0002439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response to antigenic stimulus","termid":"GO:0002874"}


id: PBO:0050546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS4 biogenesis of lysosomal organelles complex 3 subunit 2","termid":"PBO:0050546"}


id: PBO:0068839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 77, pseudogene","termid":"PBO:0068839"}


id: PBO:0088926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem7","termid":"PBO:0088926"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: PBO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP4 antisense RNA 1","termid":"PBO:0047834"}


id: PBO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 1","termid":"PBO:0044595"}


id: MOD:00224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to 1-chondroitin sulfate-L-aspartic acid ester","definition_xrefs":["RESID:AA0219","PubMed:1898736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-chondroitin sulfate-L-aspartic acid ester","synonyms":[{"name":"1-aspartic acid ester with 6-chondroitin 4-sulfate","type":"exact"},{"name":"1-chondroitin sulfate-L-aspartic acid ester","type":"exact"},{"name":"MOD_RES Aspartate 1-(chondroitin 4-sulfate)-ester","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-6-(1-L-aspartyl)-D-galactose)","type":"exact"},{"name":"protein-glycosaminoglycan-protein cross-link","type":"exact"}],"termid":"MOD:00224"}


id: PBO:0069345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 605, pseudogene","termid":"PBO:0069345"}


id: PBO:0052846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-2","termid":"PBO:0052846"}


id: GO:0106024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"negatively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pupariation","termid":"GO:0106024"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: PBO:0078896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 7-1","termid":"PBO:0078896"}


id: PBO:0047952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(18)(q21.3)","termid":"PBO:0047952"}


id: PBO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP helicase Irc3 (predicted)","termid":"PBO:0009350"}


id: PBO:0040841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3-like motif containing, cell death inducer","termid":"PBO:0040841"}


id: PBO:0077252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 3","termid":"PBO:0077252"}


id: GO:2000882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of starch catabolic process","termid":"GO:2000881"},{"relation_name":"is_a","term_name":"negative regulation of starch metabolic process","termid":"GO:2000905"},{"relation_name":"negatively_regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of starch catabolic process","synonyms":[{"name":"negative regulation of starch breakdown","type":"exact"},{"name":"negative regulation of starch catabolism","type":"exact"},{"name":"negative regulation of starch degradation","type":"exact"}],"termid":"GO:2000882"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: PBO:0087390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Steryl ester hydrolase; one of three gene products (Yeh1p, Yeh2p, Tgl1p) responsible for steryl ester hydrolase activity and involved in sterol homeostasis; localized to lipid particle membranes","termid":"PBO:0087390"}


id: PBO:0090477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase","termid":"PBO:0090477"}


id: GO:0070150
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93109],"is_not":false,"summary":null,"term":"GO:0070150"}]},"cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA in a mitochondrion, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-tRNA aminoacylation","termid":"GO:0006426"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0006399","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"mitochondrial glycyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070150","terms_by_termid":{"GO:0070150":null}}


id: PBO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zellweger syndrome","termid":"PBO:0001158"}


id: GO:0018166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent addition of a tyrosine residue to the C-terminus of a protein; typically the addition of tyrosine to the C-terminus of detyrosinated alpha-tubulin by the enzyme tubulin-tyrosine ligase.","definition_xrefs":["RESID:AA0257"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein-tyrosinylation (obsolete GO:0018166)","termid":"GO:0018166"}


id: FYPO:0003377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to nitrosative stress is lower than normal. Total RNA or a specific RNA may be affected. Nitrosative stress often results from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GO:0071500","PMID:20204527","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to nitrosative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to nitrosative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to nitrosative stress","type":"exact"},{"name":"reduced RNA level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003377"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: GO:0010073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the identity, size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem maintenance","termid":"GO:0010073"}


id: PBO:0076950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1","termid":"PBO:0076950"}


id: GO:0047545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor.","definition_xrefs":["MetaCyc:2-HYDROXYGLUTARATE-DEHYDROGENASE-RXN","EC:1.1.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-880050","RHEA:21252"],"synonyms":[{"name":"(S)-2-hydroxyglutarate:(acceptor) 2-oxidoreductase","type":"related"},{"name":"(S)-2-hydroxyglutarate:acceptor 2-oxidoreductase","type":"related"},{"name":"L-alpha-hydroxyglutarate dehydrogenase activity","type":"related"},{"name":"L-alpha-hydroxyglutarate:NAD+ 2-oxidoreductase","type":"narrow"},{"name":"alpha-hydroxyglutarate dehydrogenase (NAD+ specific)","type":"narrow"},{"name":"alpha-hydroxyglutarate dehydrogenase activity","type":"related"},{"name":"alpha-hydroxyglutarate oxidoreductase activity","type":"related"},{"name":"hydroxyglutaric dehydrogenase activity","type":"related"}],"termid":"GO:0047545"}


id: GO:2001267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","synonyms":[{"name":"regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001267"}


id: PBO:0079573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 5","termid":"PBO:0079573"}


id: PBO:0083881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083881"}


id: PBO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 1","termid":"PBO:0060685"}


id: PBO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M-phase specific E3 ubiquitin protein ligase","termid":"PBO:0048168"}


id: PBO:0040941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 12","termid":"PBO:0040941"}


id: GO:1905284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:TermGenie","GOC:bc","GOC:BHF_miRNA","PMID:23069713","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0045742"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"activation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"activation of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"activation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"activation of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"activation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"positive regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"up-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"upregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"upregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905284"}


id: GO:0140877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mevastatin , also known as compactin or ML-236B, and which acts as a potent competitive inhibitor of HMG-CoA reductase.","definition_xrefs":["PMID:12172803","PMID:12242508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mevastatin biosynthetic process","synonyms":[{"name":"mevastatin anabolism","type":"exact"},{"name":"mevastatin biosynthesis","type":"exact"},{"name":"mevastatin formation","type":"exact"},{"name":"mevastatin synthesis","type":"exact"}],"termid":"GO:0140877"}


id: PBO:0053645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 693","termid":"PBO:0053645"}


id: GO:0044173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the host cell ER-Golgi intermediate compartment system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0044172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment membrane","synonyms":[{"name":"host ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"host endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0044173"}


id: GO:0010125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycothiol, which consists of N-acetyl-L-cysteine linked to a pseudodisaccharide, D-glucosamine and myo-inositol. Mycothiol is produced in actinomycetes like mycobacteria and serves similar functions to glutathione.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycothiol metabolic process","termid":"GO:0010126"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"mycothiol biosynthetic process","secondary_identifiers":["MetaCyc:PWY1G-0"],"synonyms":[{"name":"mycothiol anabolism","type":"exact"},{"name":"mycothiol biosynthesis","type":"exact"},{"name":"mycothiol formation","type":"exact"},{"name":"mycothiol synthesis","type":"exact"}],"termid":"GO:0010125"}


id: PBO:0039695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apurinic/apyrimidinic endodeoxyribonuclease 1","termid":"PBO:0039695"}


id: FYPO:0006909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle occurs at a smaller cell size than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PMID:872890","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"mitotic G1/S phase transition at small cell size","synonyms":[{"name":"G1/S phase transition at small cell size during mitotic cell cycle","type":"exact"},{"name":"mitotic G1/S phase transition at abnormally small cell size","type":"exact"},{"name":"mitotic G1/S phase transition at small cell size during vegetative growth","type":"exact"},{"name":"small cell size at G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006909"}


id: GO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a voltage-gated sodium channel in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044492"}


id: GO:0061831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature spermatids and Sertoli cells at the luminal end of the Sertoli cell.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:dph","PMID:22332112","PMID:23546604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical ectoplasmic specialization","synonyms":[{"name":"apical ES","type":"exact"}],"termid":"GO:0061831"}


id: FYPO:0006326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is decreased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex during vegetative growth","termid":"FYPO:0002557"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to medial cortical node","synonyms":[{"name":"decreased protein localisation to medial cortical node","type":"exact"},{"name":"decreased protein localization to cytokinetic nodes","type":"related"},{"name":"decreased protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to medial cortical node","type":"related"},{"name":"reduced protein localization to medial cortical node","type":"exact"}],"termid":"FYPO:0006326"}


id: PBO:0029938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_curved_germ_tubes_(obsolete_FYPO:0002299)","termid":"PBO:0029938"}


id: PBO:0058540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6085","termid":"PBO:0058540"}


id: PBO:0066520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor a","termid":"PBO:0066520"}


id: PBO:0088445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh202","termid":"PBO:0088445"}


id: PBO:0064467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 4, accessory subunit","termid":"PBO:0064467"}


id: PBO:0030453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homocitrate_synthase_activity","termid":"PBO:0030453"}


id: GO:0006657
data:
  {"annotated_genes":["SJAG_01918","SJAG_00812","SJAG_00946","SJAG_03154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60906,84951,105348,108043,111797],"is_not":false,"summary":null,"term":"GO:0006657"}]},"cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with the phosphorylation of choline and ends with the combination of CDP-choline with diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY3O-450","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00812":null,"SJAG_00946":null,"SJAG_01918":null,"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-choline pathway","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"Kennedy pathway","type":"exact"},{"name":"phosphatidylcholine biosynthesis from choline","type":"exact"}],"termid":"GO:0006657","terms_by_termid":{"GO:0006657":null}}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: PBO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cek1","termid":"PBO:0005620"}


id: GO:0106392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Aprotein complex required for the splicing of intron 3 of the cytochrome b (COB) gene. In S. cerevisiae, the complex contains the maturase bI3 (which derives from one of the products of the splicing), the MRS1 cofactor and the intron 4 of the cytochrome b pre-mRNA. The two proteins stimulate the ribozyme activity of the pre-mRNA which autoctalyse a group I intron splicing.","definition_xrefs":["GOC:lnp","PMID:11773622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bI3 intron splicing complex","secondary_identifiers":["Intact:EBI-16426213"],"termid":"GO:0106392"}


id: GO:1903533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"protein targeting","termid":"GO:0006605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting","synonyms":[{"name":"regulation of nascent polypeptide association","type":"related"},{"name":"regulation of protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:1903533"}


id: GO:0033517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytic acid, myo-inositol hexakisphosphate, a regulator of intracellular signaling, a highly abundant animal anti-nutrient and a phosphate and mineral storage compound in plant seeds.","definition_xrefs":["PMID:16107538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate metabolic process","synonyms":[{"name":"myo-inositol hexakisphosphate metabolism","type":"exact"},{"name":"phytate metabolic process","type":"exact"},{"name":"phytate metabolism","type":"exact"}],"termid":"GO:0033517"}


id: GO:2000207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal subunit export from nucleus","termid":"GO:2000201"},{"relation_name":"is_a","term_name":"regulation of ribosomal small subunit export from nucleus","termid":"GO:2000206"},{"relation_name":"negatively_regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"negative regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"negative regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000207"}


id: PBO:0088107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uroporphyrinogen decarboxylase; catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; a hem12 mutant has phenotypes similar to patients with porphyria cutanea tarda","termid":"PBO:0088107"}


id: PBO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1 (predicted)","termid":"PBO:0000576"}


id: GO:0072432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G1/S transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072432"}


id: GO:0045241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Cytosolic complex that possesses alpha-ketoglutarate dehydrogenase activity.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic alpha-ketoglutarate dehydrogenase complex (obsolete GO:0045241)","synonyms":[{"name":"2-oxoglutarate dehydrogenase complex","type":"broad"}],"termid":"GO:0045241"}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: PBO:0063770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 2 pseudogene 1","termid":"PBO:0063770"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mtg_apoptosis","PMID:14569084","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptosis","type":"narrow"},{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: SO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regional centromere is a large modular centromere found in fission yeast and higher eukaryotes. It consist of a central core region flanked by inverted inner and outer repeat regions.","definition_xrefs":["SO:vw","PMID:7502067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere","synonyms":[{"name":"regional centromere","type":"exact"}],"termid":"SO:0001795"}


id: PBO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit MrpS12 (predicted)","termid":"PBO:0017665"}


id: PBO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-U ortholog Mis17","termid":"PBO:0025517"}


id: GO:0009136
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside diphosphate anabolism","type":"exact"},{"name":"purine nucleoside diphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside diphosphate formation","type":"exact"},{"name":"purine nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009136","terms_by_termid":{"GO:0006172":null}}


id: GO:0045715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045715)","synonyms":[{"name":"down regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045715"}


id: GO:0097630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","PMID:18725538","PMID:24591649"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of omegasome membrane (obsolete GO:0097630)","synonyms":[{"name":"intrinsic to omegasome membrane","type":"narrow"}],"termid":"GO:0097630"}


id: PBO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntingtin-interacting protein homolog","termid":"PBO:0001901"}


id: PBO:0059439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A8","termid":"PBO:0059439"}


id: GO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of oospore formation","termid":"GO:0075244"},{"relation_name":"negatively_regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of oospore formation","termid":"GO:0075246"}


id: PBO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1","termid":"PBO:0071753"}


id: PBO:0044881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A divergent transcript","termid":"PBO:0044881"}


id: PBO:0045627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 39 (pseudogene)","termid":"PBO:0045627"}


id: PR:P50519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein hsp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.04c","synonyms":[{"name":"Spom972h-hsp9","type":"exact"}],"termid":"PR:P50519"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: PBO:0039306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 1, histone H2A dioxygenase","termid":"PBO:0039306"}


id: PBO:0018168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit Lsg1","termid":"PBO:0018168"}


id: PBO:0028707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_meiotic_cell_cycle","termid":"PBO:0028707"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: PR:O13962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c-type heme lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01269","PANTHER:PTHR12743:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.02c","secondary_identifiers":["UniProtKB:O13962"],"synonyms":[{"name":"CC1HL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HCCS","type":"exact"}],"termid":"PR:O13962"}


id: PR:O42654
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.15 gene.","definition_xrefs":["UniProtKB:O42654","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 134 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.15","synonyms":[{"name":"Spom972h-SPAC10F6.15","type":"exact"}],"termid":"PR:O42654"}


id: PR:O42933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein O-mannosyl-transferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.09","secondary_identifiers":["UniProtKB:O42933"],"synonyms":[{"name":"SPBC16C6.09","type":"related"},{"name":"Spom972h-POMT1","type":"exact"},{"name":"oma4","type":"related"}],"termid":"PR:O42933"}


id: PBO:0060961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor related to kappaB binding protein","termid":"PBO:0060961"}


id: GO:0051175
data:
  {"annotated_genes":["SJAG_01187","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111521,107428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"negatively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sulfur metabolic process","type":"exact"},{"name":"down-regulation of sulfur metabolic process","type":"exact"},{"name":"downregulation of sulfur metabolic process","type":"exact"},{"name":"inhibition of sulfur metabolic process","type":"narrow"},{"name":"negative regulation of sulfur metabolism","type":"exact"},{"name":"negative regulation of sulphur metabolic process","type":"exact"},{"name":"negative regulation of sulphur metabolism","type":"exact"}],"termid":"GO:0051175","terms_by_termid":{"GO:2001211":null}}


id: GO:0021962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the vestibular nucleus of the pons towards target cells in the spinal cord.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulospinal tract morphogenesis","termid":"GO:0021962"}


id: PBO:0069106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 354, pseudogene","termid":"PBO:0069106"}


id: _global:causal_relation_between_material_entity_and_a_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","secondary_identifiers":["RO:0002595"],"termid":"_global:causal_relation_between_material_entity_and_a_process"}


id: GO:0009597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a virus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of virus","synonyms":[{"name":"perception of virus","type":"related"}],"termid":"GO:0009597"}


id: PBO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 11-1","termid":"PBO:0061181"}


id: GO:0120059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of small intestinal transit","termid":"GO:0120057"},{"relation_name":"negatively_regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of small intestinal transit","synonyms":[{"name":"negative regulation of small bowel transit","type":"exact"},{"name":"negative regulation of small intestine transit","type":"exact"}],"termid":"GO:0120059"}


id: GO:0090483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.","definition_xrefs":["PMID:22988102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity","synonyms":[{"name":"cardiolipin synthase","type":"related"}],"termid":"GO:0090483"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_04911","SJAG_05240","SJAG_02185","SJAG_01654","SJAG_00363","SJAG_01452","SJAG_01315","SJAG_02455","SJAG_00504","SJAG_03469","SJAG_00249","SJAG_00859","SJAG_01504","SJAG_16453","SJAG_04898","SJAG_02078","SJAG_02279","SJAG_02304","SJAG_00076","SJAG_03993","SJAG_05025","SJAG_03995","SJAG_00597","SJAG_01810","SJAG_01301","SJAG_03301","SJAG_01870","SJAG_00809","SJAG_00498","SJAG_02722","SJAG_00147","SJAG_03430","SJAG_03112","SJAG_04783","SJAG_00911","SJAG_00322","SJAG_03966","SJAG_04318","SJAG_00577","SJAG_05349","SJAG_02560","SJAG_04163","SJAG_00474","SJAG_01214","SJAG_03427","SJAG_00602","SJAG_02844","SJAG_02558","SJAG_00058","SJAG_03983","SJAG_05009","SJAG_02227","SJAG_03547","SJAG_03210","SJAG_01008","SJAG_00225","SJAG_04117","SJAG_04214","SJAG_00414","SJAG_00094","SJAG_01152","SJAG_00206"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83938,84674,86087,91901,92265,93773,96764,98721,99098,99104,99275,100551,100581,100909,101699,103231,107338,109926,111033,113988,114895],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[101918,97318,91270,93930,106718,109331,87662,114721,99286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[96763,101827,113246,91495,92938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[102458,92939,113247,104827,102608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[104929,85135,86318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[92430,109915,101928,97321,106692,114724,91024,102459,91279,108711,103003,99289,104828,106710,84673,89142,102823,112452,97818,87666,91708,93933,106118,106720,109335,111295,101573,105571,108425,91437,98622,89471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["GOC:mah","PMID:11343900","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: GO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The excessive phosphorylation of a protein, as a result of activation of kinases, deactivation of phosphatases, or both.","definition_xrefs":["GOC:jid","ISBN:039751820X","PMID:12859672"],"gene_count":0,"genotype_count":0,"name":"obsolete hyperphosphorylation (obsolete GO:0048151)","synonyms":[{"name":"hyperphosphorylation","type":"exact"}],"termid":"GO:0048151"}


id: FYPO:0006116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to actin cortical patch","synonyms":[{"name":"abolished protein localisation to actin cortical patch","type":"exact"},{"name":"abolished protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin patch","type":"exact"},{"name":"protein localization to actin cortical patch abolished","type":"exact"}],"termid":"FYPO:0006116"}


id: GO:0032793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activity of the transcription factor CREB.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-binding transcription factor activity","termid":"GO:0051091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of CREB transcription factor activity","synonyms":[{"name":"CREB activator","type":"related"},{"name":"activation of CREB","type":"exact"},{"name":"activation of CREB transcription factor","type":"exact"}],"termid":"GO:0032793"}


id: MOD:00343
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-methyl-L-tyrosine.","definition_xrefs":["DeltaMass:0","RESID:AA0338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated tyrosine","termid":"MOD:00718"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-tyrosine","synonyms":[{"name":"N-methyltyrosine","type":"exact"},{"name":"(2S)-3-(4-hydroxyphenyl)-2-(methylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N-methyltyrosine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"N-methyl Tyrosinyl","type":"exact"},{"name":"N-methyl-L-tyrosine","type":"exact"},{"name":"N-methylated L-tyrosine","type":"exact"},{"name":"NMe1Tyr","type":"exact"}],"termid":"MOD:00343"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: GO:0051432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH1 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["Prosite:PS01080","PMID:9020082","PMID:11048732","PMID:12133724","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"BH1 domain binding","termid":"GO:0051432"}


id: GO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte activation involved in immune response","synonyms":[{"name":"immune cell activation during immune response","type":"related"},{"name":"leucocyte activation during immune response","type":"related"},{"name":"leukocyte activation during immune response","type":"related"}],"termid":"GO:0002366"}


id: PBO:0042413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25C","termid":"PBO:0042413"}


id: GO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine = urocanate + NH3.","definition_xrefs":["EC:4.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"histidine ammonia-lyase activity","secondary_identifiers":["Reactome:R-HSA-70899","RHEA:21232","MetaCyc:HISTIDINE-AMMONIA-LYASE-RXN"],"synonyms":[{"name":"L-histidine ammonia-lyase (urocanate-forming)","type":"related"},{"name":"L-histidine ammonia-lyase activity","type":"related"},{"name":"histidase activity","type":"related"},{"name":"histidinase activity","type":"related"},{"name":"histidine alpha-deaminase activity","type":"related"}],"termid":"GO:0004397"}


id: PBO:0081536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 445","termid":"PBO:0081536"}


id: GO:0018271
data:
  {"annotated_genes":["SJAG_03069"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004077"},{"annotations":[104611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004078"},{"annotations":[104612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004079"},{"annotations":[104613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004080"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03069":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biotin-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993447","Reactome:R-HSA-9035987","Reactome:R-HSA-2993802","EC:6.3.4.-","Reactome:R-HSA-2993814","Reactome:R-HSA-9035990","Reactome:R-HSA-3323184","Reactome:R-HSA-4167511","Reactome:R-HSA-9035988","Reactome:R-HSA-2993799","GO:0000106","MetaCyc:BIOTINLIG-RXN"],"synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271","terms_by_termid":{"GO:0004077":null,"GO:0004078":null,"GO:0004079":null,"GO:0004080":null}}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:22228629","PMID:23430248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: PR:O14104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys12 gene.","definition_xrefs":["UniProtKB:O14104","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoisocitrate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.04","synonyms":[{"name":"HICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lys12","type":"exact"}],"termid":"PR:O14104"}


id: GO:0042398
data:
  {"annotated_genes":["SJAG_00832","SJAG_01616","SJAG_03494","SJAG_01233","SJAG_03632","SJAG_03856","SJAG_01198","SJAG_04481","SJAG_02599","SJAG_02225","SJAG_01126","SJAG_00988","SJAG_03275","SJAG_00529","SJAG_01351","SJAG_00106","SJAG_00815","SJAG_02408","SJAG_05200","SJAG_03679","SJAG_00043","SJAG_04156","SJAG_03224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104409,108471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[61250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[107594,107593,99706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[108472,86431,104410,100995,109740,102139,100847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[100653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[93116,104495,89402,114183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[99707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[109433,94828,94824,85037,98832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[110729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[107595,99708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"},{"annotations":[110116,102140,86433,100996,109741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[89033,100812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_00832":null,"SJAG_00988":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01233":null,"SJAG_01351":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_02599":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03494":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03856":null,"SJAG_04156":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular modified amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative anabolism","type":"exact"},{"name":"cellular amino acid derivative biosynthesis","type":"exact"},{"name":"cellular amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative formation","type":"exact"},{"name":"cellular amino acid derivative synthesis","type":"exact"},{"name":"cellular modified amino acid anabolism","type":"exact"},{"name":"cellular modified amino acid biosynthesis","type":"exact"},{"name":"cellular modified amino acid formation","type":"exact"},{"name":"cellular modified amino acid synthesis","type":"exact"}],"termid":"GO:0042398","terms_by_termid":{"GO:0006659":null,"GO:0006750":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0015940":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null,"GO:0052699":null,"GO:0052707":null,"GO:0140479":null,"GO:1903257":null}}


id: PBO:0051699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-4-phosphatase type I A","termid":"PBO:0051699"}


id: PBO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.3.4","termid":"PBO:0000257"}


id: FYPO:0007529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:22144463","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","termid":"FYPO:0003234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007529"}


id: GO:0032782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or a tissue.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"bile acid secretion","termid":"GO:0032782"}


id: GO:0010058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrichoblast fate specification","termid":"GO:0010058"}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: FYPO:0000754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione gamma-glutamylcysteinyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000754"}


id: SO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which the T3 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T3_RNA_Polymerase_Promoter","synonyms":[{"name":"T3 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001206"}


id: GO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + histamine = N(tau)-methylhistamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.8","RHEA:19301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"histamine N-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-175993","KEGG_REACTION:R02155","MetaCyc:HISTAMINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:histamine N-tele-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-histamine N-methyltransferase activity","type":"related"},{"name":"histamine 1-methyltransferase activity","type":"related"},{"name":"histamine methyltransferase activity","type":"related"},{"name":"histamine-methylating enzyme","type":"related"},{"name":"imidazolemethyltransferase activity","type":"related"}],"termid":"GO:0046539"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: GO:0070631
data:
  {"annotated_genes":["SJAG_04558","SJAG_05196","SJAG_02332","SJAG_03200","SJAG_01460","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98900,96674,86262,99537,107489,108899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"},{"annotations":[86263,99538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990608"}]},"cv_name":"biological_process","definition":"Any process in which a spindle pole body is transported to, or maintained in, a specific location. A spindle pole body is a type of microtubule organizing center found in fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"is_a","term_name":"microtubule organizing center localization","termid":"GO:0061842"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990944","GO:0071790"],"synonyms":[{"name":"maintenance of spindle pole body localization","type":"narrow"},{"name":"spindle pole body localisation","type":"exact"}],"termid":"GO:0070631","terms_by_termid":{"GO:0140480":null,"GO:1990608":null}}


id: FYPO:0005770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions where RNA polymerase II actively transcribes genes. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:27611590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at highly transcribed RNA polymerase II genes during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005770"}


id: PBO:0076217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 5","termid":"PBO:0076217"}


id: PBO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal haemoglobinuri","termid":"PBO:0003559"}


id: GO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during interphase of the cell cycle. Chromosomes are usually decondensed during interphase and each long DNA molecule in a chromosome is divided into a large number of discrete domains that are folded differently.","definition_xrefs":["ISBN:0815316194","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete interphase chromosome (obsolete GO:0005707)","synonyms":[{"name":"interphase chromosome","type":"exact"}],"termid":"GO:0005707"}


id: PBO:0065442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC2 pseudogene 1","termid":"PBO:0065442"}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: PBO:0063525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 4","termid":"PBO:0063525"}


id: PATO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm lacking pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular rhythm","termid":"PATO:0001845"}


id: FYPO:0001667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell during glucose starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cAMP level","termid":"FYPO:0001666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cAMP level during glucose starvation","synonyms":[{"name":"normal cAMP accumulation during glucose starvation","type":"related"},{"name":"normal cAMP level during glucose depletion","type":"exact"},{"name":"normal cAMP level during glucose deprivation","type":"exact"},{"name":"normal cAMP level during glucose limitation","type":"related"},{"name":"normal cellular cAMP level during glucose starvation","type":"exact"},{"name":"normal cyclic AMP level during glucose starvation","type":"exact"}],"termid":"FYPO:0001667"}


id: GO:0043528
data:
  {"annotated_genes":["SJAG_04890","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92315,100212],"is_not":false,"summary":null,"term":"GO:0043528"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNA. In S. cerevisiae, this complex consists of at least two subunits, Trm11p and Trm112p.","definition_xrefs":["PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04181":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m2G10) methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043528","terms_by_termid":{"GO:0043528":null}}


id: PBO:0027933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0027933"}


id: GO:0047621
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102841],"is_not":false,"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-acylpyruvate + H2O = a carboxylate + pyruvate.","definition_xrefs":["MetaCyc:ACYLPYRUVATE-HYDROLASE-RXN","EC:3.7.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19009","UM-BBD_reactionID:r1401"],"synonyms":[{"name":"3-acylpyruvate acylhydrolase activity","type":"related"}],"termid":"GO:0047621","terms_by_termid":{"GO:0047621":null}}


id: PBO:0071020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 22","termid":"PBO:0071020"}


id: GO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation involved in immune response","synonyms":[{"name":"gamma-delta T cell proliferation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte proliferation during immune response","type":"related"},{"name":"gamma-delta T-cell proliferation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002311"}


id: PBO:0031096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_following_spore_germination","termid":"PBO:0031096"}


id: PBO:0087260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase involved in vacuolar protein sorting; functions as a membrane-associated complex with Vps34p; active form recruits Vps34p to the Golgi membrane; interacts with the GDP-bound form of Gpa1p; myristoylated; a fraction is localized, with Vps34p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0087260"}


id: PR:O94629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.11","synonyms":[{"name":"Spom972h-sro1","type":"exact"}],"termid":"PR:O94629"}


id: PBO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 6","termid":"PBO:0051398"}


id: GO:1904415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenophagy.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie","PMID:21617041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of xenophagy","termid":"GO:1904415"}


id: FYPO:0000697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-7-methylguanine glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}


id: PBO:0086938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase; Myo2p-binding protein implicated in mother-to-bud transport of cortical endoplasmic reticulum (ER), late Golgi, and mitochondria during cell division; function is regulated at multiple levels; abundance of active Ypt11p forms is controlled by phosphorylation status and degradation; normally a low-abundance protein whose ER localization is only detected when protein is highly over expressed","termid":"PBO:0086938"}


id: GO:0043555
data:
  {"annotated_genes":["SJAG_03869","SJAG_04873","SJAG_02592","SJAG_00169","SJAG_00690","SJAG_01942","SJAG_00786","SJAG_02072","SJAG_04383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105743,111656,88616,95417,90468,88913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[99408,91325,100037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"translational stress response","type":"exact"}],"termid":"GO:0043555","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: FYPO:0004349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methylglyoxal is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methylglyoxal","synonyms":[{"name":"decreased RNA accumulation during cellular response to methylglyoxal","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to methylglyoxal","type":"exact"},{"name":"reduced RNA level during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004349"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: MOD:02001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a stearoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"stearoylated residue","termid":"MOD:02001"}


id: PBO:0112275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA leakage protein Rsm1","termid":"PBO:0112275"}


id: PBO:0040329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 4","termid":"PBO:0040329"}


id: PBO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AlkylTransferase-Like","termid":"PBO:0034748"}


id: PBO:0084317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K48-specific deubiquitinating (DUB) enzyme; MINDY family endo-type deubiquitinase that preferentially cleaves long K48-linked polyubiquitin chains between moieties; diploid deletion strain exhibits high budding index; GFP-fusion protein localizes to the cytoplasm endoplasmic reticulum and cell periphery in high-throughput studies; YPL191C has a paralog, YGL082W, that arose from the whole genome duplication; ortholog of human MINDY2/FAM63B","termid":"PBO:0084317"}


id: PBO:0048266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 4","termid":"PBO:0048266"}


id: PBO:0065522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2 pseudogene 2","termid":"PBO:0065522"}


id: FYPO:0001771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}


id: GO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate.","definition_xrefs":["RHEA:15097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glutamate formimidoyltransferase activity","secondary_identifiers":["GO:0030407","EC:2.1.2.5","MetaCyc:GLUTAMATE-FORMIMINOTRANSFERASE-RXN"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:L-glutamate N-formimidoyltransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglutamic acid transferase activity","type":"related"},{"name":"formiminoglutamic formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glutamate formiminotransferase activity","type":"exact"},{"name":"glutamate formyltransferase activity","type":"related"}],"termid":"GO:0030409"}


id: PBO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_organization","termid":"PBO:0031433"}


id: PBO:0063224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 4","termid":"PBO:0063224"}


id: GO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xylulose biosynthetic process","synonyms":[{"name":"xylulose anabolism","type":"exact"},{"name":"xylulose biosynthesis","type":"exact"},{"name":"xylulose formation","type":"exact"},{"name":"xylulose synthesis","type":"exact"}],"termid":"GO:0005999"}


id: GO:0004152
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94595],"is_not":false,"summary":null,"term":"GO:0004152"},{"annotations":[94594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate.","definition_xrefs":["RHEA:18073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01868","MetaCyc:DIHYDROOROTATE-DEHYDROGENASE-RXN","Reactome:R-HSA-73569"],"termid":"GO:0004152","terms_by_termid":{"GO:0004152":null,"GO:0106430":null}}


id: GO:0006833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of water (H2O) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluid transport","termid":"GO:0042044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"water transport","termid":"GO:0006833"}


id: FYPO:0004296
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004295"},{"annotations":[115288,115287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the cell contains one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_00118"],"name":"septated cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_00118","SJAG_04551"],"single_locus_genotype_uniquenames":["pmk1delta","mid2delta","mid1delta"],"synonyms":[{"name":"septum present","type":"exact"}],"termid":"FYPO:0004296","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["ISBN:0815340729","GOC:ebc","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: PR:O59674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ort1 gene.","definition_xrefs":["UniProtKB:O59674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C29A3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.11c","synonyms":[{"name":"Spom972h-ort1","type":"exact"}],"termid":"PR:O59674"}


id: PBO:0087104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein lysine methyltransferase; responsible for trimethylation of the lysine residue at position 3 of Rpl12Ap and Rpl12Bp","termid":"PBO:0087104"}


id: GO:0061733
data:
  {"annotated_genes":["SJAG_03537","SJAG_01204","SJAG_00676","SJAG_02165","SJAG_03546","SJAG_02990","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[114556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[86883,87519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105395,105394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + lysine in peptide = CoA + N-acetyl-lysine-peptide.","definition_xrefs":["RHEA:45948","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-acetyltransferase activity","termid":"GO:0034212"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0034212","GO:0016746","GO:0140096","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide-lysine-N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9617758","Reactome:R-HSA-9626945","Reactome:R-HSA-6811508","Reactome:R-HSA-9620515","Reactome:R-HSA-8951966","Reactome:R-HSA-9701531","Reactome:R-HSA-9756494","Reactome:R-HSA-9825747"],"synonyms":[{"name":"peptide-lysine-N-acetylase activity","type":"exact"},{"name":"protein acetylase activity","type":"broad"},{"name":"protein acetyltransferase activity","type":"broad"},{"name":"protein-lysine-N-acetylase activity","type":"exact"}],"termid":"GO:0061733","terms_by_termid":{"GO:0004402":null,"GO:0010484":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null}}


id: PBO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb4","termid":"PBO:0003562"}


id: PBO:0065199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 divergent transcript","termid":"PBO:0065199"}


id: PBO:0085215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated vacuolar membrane-localized casein kinase I isoform; negatively regulates vacuole fusion during hypertonic stress via phosphorylation of Vps41p; shares essential functions with Hrr25p; regulates vesicle fusion in AP-3 pathway","termid":"PBO:0085215"}


id: PBO:0084641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule associated protein; regulates microtubule dynamics; required for accurate meiotic chromosome segregation; null mutant displays large budded cells due to delayed mitotic progression, increased levels of spontaneous Rad52 foci; IRC15 has a paralog, LPD1, that arose from the whole genome duplication","termid":"PBO:0084641"}


id: PBO:0051750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inturned planar cell polarity protein","termid":"PBO:0051750"}


id: GO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of alkaline phosphatase activity","termid":"GO:0010694"}


id: GO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of the chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"regulates","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of 1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0010602"}


id: PBO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GDP_binding","termid":"PBO:0030535"}


id: GO:1901574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chemical substance.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance biosynthetic process (obsolete GO:1901574)","synonyms":[{"name":"chemical substance anabolism","type":"exact"},{"name":"chemical substance biosynthesis","type":"exact"},{"name":"chemical substance biosynthetic process","type":"exact"},{"name":"chemical substance formation","type":"exact"},{"name":"chemical substance synthesis","type":"exact"}],"termid":"GO:1901574"}


id: GO:0102157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-3-sulfopropanediol(1-) + NAD = 2-oxo-3-hydroxy-propane-1-sulfonate + NADH + H+.","definition_xrefs":["GOC:pz","PMID:20150239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(R)-sulfopropanediol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11729"],"termid":"GO:0102157"}


id: PBO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checking DNA Synthesis","termid":"PBO:0005262"}


id: PBO:0081777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705E, pseudogene","termid":"PBO:0081777"}


id: FYPO:0001987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to pH higher than that of standard S. pombe growth media (about 5.8). Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to high pH","synonyms":[{"name":"decreased growth during cellular response to high pH","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to high pH","type":"exact"},{"name":"hypersensitive to high pH","type":"exact"},{"name":"sensitive to high pH during mitotic cell cycle","type":"related"},{"name":"sensitive to high pH during vegetative growth","type":"exact"}],"termid":"FYPO:0001987"}


id: GO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pentachlorophenol + NADPH + H+ + O2 = tetrachlorohydroquinone + NADP+ + chloride.","definition_xrefs":["EC:1.14.13.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pentachlorophenol monooxygenase activity","secondary_identifiers":["MetaCyc:PCP4MONO-RXN","RHEA:18685","UM-BBD_enzymeID:e0148"],"synonyms":[{"name":"PCB 4-monooxygenase activity","type":"related"},{"name":"PCB4MO activity","type":"related"},{"name":"PCP hydroxylase activity","type":"related"},{"name":"PcpB","type":"related"},{"name":"pentachlorophenol 4-monooxygenase activity","type":"exact"},{"name":"pentachlorophenol dechlorinase activity","type":"related"},{"name":"pentachlorophenol dehalogenase activity","type":"related"},{"name":"pentachlorophenol hydroxylase activity","type":"exact"},{"name":"pentachlorophenol,NADPH:oxygen oxidoreductase (hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018677"}


id: PBO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal defects","termid":"PBO:0001159"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: MOD:00342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-methyl-L-leucine.","definition_xrefs":["RESID:AA0337","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"},{"relation_name":"is_a","term_name":"N-methylated leucine","termid":"MOD:01808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-leucine","synonyms":[{"name":"(S)-2-methylamino-4-methylpentanoic acid","type":"exact"},{"name":"2-(methylamino)-4-methyl-valeric acid","type":"exact"},{"name":"MOD_RES N-methylleucine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-leucine","type":"exact"},{"name":"N-methylated L-leucine","type":"exact"},{"name":"N-methylleucine","type":"exact"},{"name":"NMe1Leu","type":"exact"}],"termid":"MOD:00342"}


id: PBO:0088836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup82","termid":"PBO:0088836"}


id: PBO:0075309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 1","termid":"PBO:0075309"}


id: GO:0019351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dethiobiotin metabolic process","termid":"GO:0046450"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin biosynthetic process","synonyms":[{"name":"desthiobiotin biosynthesis","type":"exact"},{"name":"desthiobiotin biosynthetic process","type":"exact"},{"name":"dethiobiotin anabolism","type":"exact"},{"name":"dethiobiotin biosynthesis","type":"exact"},{"name":"dethiobiotin formation","type":"exact"},{"name":"dethiobiotin synthesis","type":"exact"}],"termid":"GO:0019351"}


id: PBO:0024872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Bdf1","termid":"PBO:0024872"}


id: GO:0030980
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown","type":"exact"},{"name":"alpha-glucan catabolism","type":"exact"},{"name":"alpha-glucan degradation","type":"exact"}],"termid":"GO:0030980","terms_by_termid":{"GO:0072316":null}}


id: PBO:0048213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit theta","termid":"PBO:0048213"}


id: PBO:0078492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 11-1","termid":"PBO:0078492"}


id: GO:1901226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter involved in heart development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901226)","synonyms":[{"name":"activation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"activation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"activation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"activation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"narrow"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"activation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"positive regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"positive regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"up regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up-regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"up-regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"upregulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"upregulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901226"}


id: PBO:0082922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c lysine methyltransferase; trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the cytosol; not required for normal respiratory growth","termid":"PBO:0082922"}


id: PBO:0038904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRD1 antisense RNA 1","termid":"PBO:0038904"}


id: FYPO:0006120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex during vegetative growth","termid":"FYPO:0000929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to actin cortical patch","synonyms":[{"name":"decreased protein localisation to actin cortical patch during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"decreased protein localization to actin patch","type":"exact"},{"name":"reduced protein localization to actin cortical patch during vegetative growth","type":"exact"}],"termid":"FYPO:0006120"}


id: GO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete minor histocompatibility antigen (obsolete GO:0005558)","synonyms":[{"name":"minor histocompatibility antigen","type":"exact"}],"termid":"GO:0005558"}


id: PBO:0038541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 14B","termid":"PBO:0038541"}


id: PBO:0059094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1","termid":"PBO:0059094"}


id: PBO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine diphosphate-N-acetylglucosamine transporter Hut1","termid":"PBO:0003268"}


id: PBO:0058262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4640","termid":"PBO:0058262"}


id: GO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral mesoderm cell fate specification.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate specification","termid":"GO:0048378"},{"relation_name":"positively_regulates","term_name":"lateral mesodermal cell fate specification","termid":"GO:0048377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral mesodermal cell fate specification","synonyms":[{"name":"activation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"positive regulation of lateral plate mesodermal cell fate specification","type":"exact"},{"name":"stimulation of lateral mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of lateral mesodermal cell fate specification","type":"exact"},{"name":"upregulation of lateral mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048379"}


id: GO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrolase activity","synonyms":[{"name":"activation of hydrolase activity","type":"narrow"},{"name":"hydrolase activator","type":"exact"},{"name":"stimulation of hydrolase activity","type":"narrow"},{"name":"up regulation of hydrolase activity","type":"exact"},{"name":"up-regulation of hydrolase activity","type":"exact"},{"name":"upregulation of hydrolase activity","type":"exact"}],"termid":"GO:0051345"}


id: PBO:0067329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 420, pseudogene","termid":"PBO:0067329"}


id: PBO:0080561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 1","termid":"PBO:0080561"}


id: GO:1904390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cone retinal bipolar cell.","definition_xrefs":["PMID:24123365","GO_REF:0000086","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone retinal bipolar cell differentiation","synonyms":[{"name":"cone bipolar cell differentiation","type":"exact"},{"name":"retinal cone bipolar cell differentiation","type":"exact"}],"termid":"GO:1904390"}


id: GO:0098576
data:
  {"annotated_genes":["SJAG_04583","SJAG_01806","SJAG_01249","SJAG_00077","SJAG_00797","SJAG_00852","SJAG_04363"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96532,99840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[90816,95859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[92346,89917,86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"Any side (leaflet) of a membrane that faces the lumen of an organelle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_04363":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lumenal side of membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098576","terms_by_termid":{"GO:0098553":null,"GO:0099616":null,"GO:0099617":null}}


id: SO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reverse_Hoogsteen_base_pair","synonyms":[{"name":"reverse Hoogsteen base pair","type":"exact"}],"termid":"SO:0000501"}


id: FYPO:0000828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which entry into the G1 phase of the mitotic cell cycle (exit from mitosis) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic G1 phase entry","synonyms":[{"name":"accelerated entry into G1","type":"related"},{"name":"advanced mitotic G1 phase entry","type":"exact"},{"name":"advanced mitotic G1 progression","type":"related"},{"name":"mitotic cell cycle advance in G1","type":"related"},{"name":"premature G1 phase entry during mitotic cell cycle","type":"exact"},{"name":"premature exit from mitosis","type":"exact"},{"name":"premature mitotic G1 phase entry during vegetative growth","type":"exact"}],"termid":"FYPO:0000828"}


id: PBO:0075790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 10 pseudogene 1","termid":"PBO:0075790"}


id: PBO:0078928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-4","termid":"PBO:0078928"}


id: PBO:0063844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase beta","termid":"PBO:0063844"}


id: PBO:0080097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undifferentiated embryonic cell transcription factor 1","termid":"PBO:0080097"}


id: GO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic casting off and regeneration of an outer covering of cuticle, feathers, hair, horns, skin, etc.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle","termid":"GO:0042303"}


id: PBO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase Hat1","termid":"PBO:0000733"}


id: GO:0098654
data:
  {"annotated_genes":["SJAG_05273","SJAG_03867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111125,114850],"is_not":false,"summary":null,"term":"GO:0098654"}]},"cv_name":"cellular_component","definition":"A protein complex that includes Mis16(Yippee family) and/or Mis18 (WD repeat) subunits that is involved in the deposition of centromere specific (CENP-A containing) nucleosomes at the centromere.","definition_xrefs":["PMID:24774534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03867":null,"SJAG_05273":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CENP-A recruiting complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MIS18 complex","type":"narrow"}],"termid":"GO:0098654","terms_by_termid":{"GO:0098654":null}}


id: MOD:00737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylneuraminic acid (sialic acid) group through a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylneuraminylated","synonyms":[{"name":"N-acetylneuraminic acid (Sialic acid, NeuAc, NANA, SA)","type":"exact"},{"name":"NeuNAc","type":"exact"}],"termid":"MOD:00737"}


id: FYPO:0002029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a cell divides asymmetrically, resulting in the formation of daughter cells that are not the same size.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell division, large and small daughter cells","synonyms":[{"name":"abnormal cell division, large and small daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell division, large and small daughter cells during vegetative growth","type":"exact"}],"termid":"FYPO:0002029"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: PBO:0083112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA photolyase involved in photoreactivation; repairs pyrimidine dimers in the presence of visible light; induced by DNA damage; regulated by transcriptional repressor Rph1p","termid":"PBO:0083112"}


id: PBO:0038397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_during","termid":"PBO:0038397"}


id: GO:0031401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification process","synonyms":[{"name":"activation of protein modification","type":"narrow"},{"name":"stimulation of protein modification","type":"narrow"},{"name":"up regulation of protein modification","type":"exact"},{"name":"up-regulation of protein modification","type":"exact"},{"name":"upregulation of protein modification","type":"exact"}],"termid":"GO:0031401"}


id: PR:P78794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein CWC15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12718:SF2","OMA:SCHPO02687","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.06c","secondary_identifiers":["UniProtKB:P78794"],"synonyms":[{"name":"Spom972h-CWC15","type":"exact"},{"name":"complexed with cdc5 protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78794"}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: PBO:0109516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2879","termid":"PBO:0109516"}


id: GO:0030324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["UBERON:0002048","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung development","termid":"GO:0030324"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: GO:1902799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphodiesterase I activity.","definition_xrefs":["PMID:24559510","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exonuclease activity","termid":"GO:1905777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphodiesterase I activity","synonyms":[{"name":"regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"regulation of 5'-NPDase activity","type":"related"},{"name":"regulation of 5'-PDE activity","type":"related"},{"name":"regulation of 5'-PDase activity","type":"related"},{"name":"regulation of 5'-exonuclease activity","type":"related"},{"name":"regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"regulation of 5'NPDE activity","type":"related"},{"name":"regulation of PDE I activity","type":"exact"},{"name":"regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"regulation of exonuclease I activity","type":"related"},{"name":"regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphodiesterase activity","type":"broad"}],"termid":"GO:1902799"}


id: PBO:0011957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_deletion","termid":"PBO:0011957"}


id: PBO:0062791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 5","termid":"PBO:0062791"}


id: PBO:0085425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-loop ATPase with similarity to human OLA1 and bacterial YchF; identified as specifically interacting with the proteasome; positively regulates heat shock response; null mutant displays increased translation rate and increased readthrough of premature stop codons; protein abundance increases in response to hydrogen peroxide and to DNA replication stress","termid":"PBO:0085425"}


id: GO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The thioether cross-linking of a cysteine residue to a tyrosine residue to form 3'-(S-L-cysteinyl)-L-tyrosine, found in galactose oxidase.","definition_xrefs":["RESID:AA0113"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine (obsolete GO:0018234)","termid":"GO:0018234"}


id: GO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MCM complex, a hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:mah","PMID:21813639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"MCM complex assembly","termid":"GO:0072689"}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: PBO:0079342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 26, pseudogene","termid":"PBO:0079342"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["EC:5.4.2.9","RHEA:17013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["KEGG_REACTION:R00661","MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: PBO:0089109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor C, GTPase activating protein Tbc1","termid":"PBO:0089109"}


id: SO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_2prime_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_2_prime_O_trimethylguanosine","secondary_identifiers":["RNAMOD:035"],"synonyms":[{"name":"N2,N2,2'-O-trimethylguanosine","type":"exact"},{"name":"m22Gmv","type":"exact"}],"termid":"SO:0001330"}


id: GO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045565)","synonyms":[{"name":"down regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"negative regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045565"}


id: PBO:0072334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 20","termid":"PBO:0072334"}


id: GO:2000871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of progesterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of female gonad development","termid":"GO:2000195"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of progesterone secretion","termid":"GO:2000870"},{"relation_name":"negatively_regulates","term_name":"progesterone secretion","termid":"GO:0042701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of progesterone secretion","termid":"GO:2000871"}


id: PBO:0075613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 1","termid":"PBO:0075613"}


id: PBO:0068408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1","termid":"PBO:0068408"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_01145","SJAG_04028","SJAG_04068","SJAG_04406","SJAG_03401","SJAG_02780","SJAG_02958","SJAG_04698","SJAG_03960","SJAG_00612","SJAG_04096","SJAG_00339","SJAG_04616","SJAG_03606","SJAG_02463","SJAG_01033","SJAG_03608","SJAG_01406","SJAG_03951","SJAG_00547","SJAG_01872","SJAG_01059","SJAG_01541","SJAG_01183","SJAG_02779","SJAG_04905","SJAG_00057","SJAG_00275","SJAG_00233","SJAG_02050","SJAG_03595","SJAG_04506","SJAG_01960","SJAG_04241","SJAG_04714","SJAG_03820","SJAG_04673","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89435,89203,92592,85123,108318,113061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[106960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[94425,111605,86828,87312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[110226,75363,106716,113235,72141,99065,110233,88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[87883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[113239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[87313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[88673,94147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[108784,100683,99865,111839,90148,105771,112556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[85456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[106190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[85457,92841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[107028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[88168,88162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[108325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[91644,84604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy, not direct ATP coupling. Secondary active transporters include symporters and antiporters.","definition_xrefs":["PMID:10839820","GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00233":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00339":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01406":null,"SJAG_01541":null,"SJAG_01872":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_04028":null,"SJAG_04068":null,"SJAG_04096":null,"SJAG_04241":null,"SJAG_04406":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04673":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015570","TC:2.A","GO:0015353","GO:0015404","GO:0015290"],"synonyms":[{"name":"active transporter","type":"broad"},{"name":"coupled carrier","type":"exact"},{"name":"electrochemical potential-driven transporter activity","type":"exact"},{"name":"energizer of outer membrane receptor-mediated transport activity","type":"narrow"},{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"},{"name":"heavy metal ion porter activity","type":"narrow"},{"name":"ion-gradient-driven energizer activity","type":"narrow"},{"name":"multidrug endosomal transmembrane transporter activity","type":"narrow"},{"name":"nitrite/nitrate porter activity","type":"narrow"},{"name":"porter activity","type":"exact"},{"name":"porters","type":"exact"},{"name":"secondary carrier-type facilitators","type":"exact"}],"termid":"GO:0015291","terms_by_termid":{"GO:0005315":null,"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0005371":null,"GO:0005452":null,"GO:0005471":null,"GO:0008271":null,"GO:0008506":null,"GO:0010486":null,"GO:0015295":null,"GO:0015297":null,"GO:0015366":null,"GO:0015369":null,"GO:0015379":null,"GO:0015385":null,"GO:0015386":null,"GO:0015505":null,"GO:0034216":null,"GO:0071913":null,"GO:0097434":null,"GO:0140987":null}}


id: PBO:0074335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1","termid":"PBO:0074335"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03268","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: GO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"secondary cell wall biogenesis involved in seed trichome differentiation","synonyms":[{"name":"secondary cell wall biosynthesis involved in seed trichome differentiation","type":"exact"},{"name":"seed trichome secondary wall biosynthesis","type":"related"}],"termid":"GO:0090379"}


id: PBO:0054359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1752","termid":"PBO:0054359"}


id: PBO:0041319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 5","termid":"PBO:0041319"}


id: GO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine cyclase activity (obsolete GO:0018128)","secondary_identifiers":["EC:4.2.1.-"],"synonyms":[{"name":"peptidyl-serine cyclase activity","type":"exact"}],"termid":"GO:0018128"}


id: PBO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetra spanning protein 1, Tts1","termid":"PBO:0004926"}


id: SO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000971 DNA_replication_mode (obsolete SO:0000971)","synonyms":[{"name":"DNA replication mode","type":"exact"}],"termid":"SO:0000971"}


id: PBO:0065296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 3","termid":"PBO:0065296"}


id: PBO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase (predicted)","termid":"PBO:0000783"}


id: PBO:0059768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 42","termid":"PBO:0059768"}


id: PBO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0031218"}


id: GO:2000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"}


id: PR:000085729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht1/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085729"}


id: PBO:0055460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2893","termid":"PBO:0055460"}


id: PBO:0067698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 6","termid":"PBO:0067698"}


id: PBO:0028672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_meiosis","termid":"PBO:0028672"}


id: PBO:0055691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"liver cell viability associated lncRNA","termid":"PBO:0055691"}


id: PR:O74907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA2 and CDKN1A-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13261:SF0","OMA:SCHPO04180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.08","secondary_identifiers":["UniProtKB:O74907"],"synonyms":[{"name":"Spom972h-BCCIP","type":"exact"}],"termid":"PR:O74907"}


id: GO:0045117
data:
  {"annotated_genes":["SJAG_00835","SJAG_03256","SJAG_03400","SJAG_04673","SJAG_02962","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[99720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86276,96754,86277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of azoles, heterocyclic compounds found in many biologically important substances, across a lipid bilayer, across a membrane.","definition_xrefs":["ISBN:3527307206","GOC:go_curators","Wikipedia:Azole"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"azole transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"azole transport","type":"related"}],"termid":"GO:0045117","terms_by_termid":{"GO:0071934":null,"GO:0089708":null,"GO:0090513":null,"GO:0140125":null,"GO:1990545":null}}


id: PBO:0042259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 1","termid":"PBO:0042259"}


id: PR:O94684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.18c","synonyms":[{"name":"CDK-activating kinase assembly factor MAT1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein pmh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B 38 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p38 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmh1","type":"exact"}],"termid":"PR:O94684"}


id: GO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-glucosyl residue from UDP-glucose to a hydroxymethylcytosine residue in DNA.","definition_xrefs":["EC:2.4.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.26-RXN"],"synonyms":[{"name":"T2-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T4-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"T6-HMC-alpha-glucosyl transferase activity","type":"related"},{"name":"UDP-glucose:DNA alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-DNA alpha-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-deoxyribonucleate alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0033820"}


id: PBO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 1","termid":"PBO:0061551"}


id: PBO:0087305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0087305"}


id: PBO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 2","termid":"PBO:0042912"}


id: PBO:0048735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 6","termid":"PBO:0048735"}


id: GO:1902106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:add","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"negatively_regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte differentiation","synonyms":[{"name":"down regulation of immune cell differentiation","type":"exact"},{"name":"down regulation of leucocyte differentiation","type":"exact"},{"name":"down regulation of leukocyte differentiation","type":"exact"},{"name":"down-regulation of immune cell differentiation","type":"exact"},{"name":"down-regulation of leucocyte differentiation","type":"exact"},{"name":"down-regulation of leukocyte differentiation","type":"exact"},{"name":"downregulation of immune cell differentiation","type":"exact"},{"name":"downregulation of leucocyte differentiation","type":"exact"},{"name":"downregulation of leukocyte differentiation","type":"exact"},{"name":"inhibition of immune cell differentiation","type":"narrow"},{"name":"inhibition of leucocyte differentiation","type":"narrow"},{"name":"inhibition of leukocyte differentiation","type":"narrow"},{"name":"negative regulation of immune cell differentiation","type":"exact"},{"name":"negative regulation of leucocyte differentiation","type":"exact"}],"termid":"GO:1902106"}


id: GO:0005922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction.","definition_xrefs":["PMID:11146276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"gap junction","termid":"GO:0005921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"connexin complex","secondary_identifiers":["NIF_Subcellular:sao445019788"],"synonyms":[{"name":"connexon","type":"exact"},{"name":"connexon complex","type":"related"}],"termid":"GO:0005922"}


id: PBO:0079180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 9","termid":"PBO:0079180"}


id: PBO:0086280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in response to iron deprivation; transcription increases during iron deprivation and during treatment with 2-(6-benzyl-2-pyridyl)quinazoline (BPQ) and copper; regulated by Aft1p and, to a lesser extent, by Aft2p; originally identified as a syntenic homolog of an Ashbya gossypii gene; localizes to nucleus and cytoplasm, and nuclear localization is enhanced under iron-replete conditions","termid":"PBO:0086280"}


id: PBO:0077626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1A","termid":"PBO:0077626"}


id: PBO:0052332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1755","termid":"PBO:0052332"}


id: GO:1901814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of astaxanthin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:16434154","MetaCyc:PWY-5288","UniPathway:UPA00387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"astaxanthin metabolic process","termid":"GO:1901813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"astaxanthin catabolic process","synonyms":[{"name":"astaxanthin breakdown","type":"exact"},{"name":"astaxanthin catabolism","type":"exact"},{"name":"astaxanthin degradation","type":"exact"}],"termid":"GO:1901814"}


id: PBO:0049010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1","termid":"PBO:0049010"}


id: GO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell proliferation","synonyms":[{"name":"activation of T cell proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of T cell proliferation","type":"narrow"},{"name":"up regulation of T cell proliferation","type":"exact"},{"name":"up-regulation of T cell proliferation","type":"exact"},{"name":"upregulation of T cell proliferation","type":"exact"}],"termid":"GO:0042102"}


id: PBO:0070462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 5","termid":"PBO:0070462"}


id: PBO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensor for misfolded ER glycoproteins Yos9 (predicted)","termid":"PBO:0000419"}


id: GO:0008289
data:
  {"annotated_genes":["SJAG_01437","SJAG_02982","SJAG_03405","SJAG_02707","SJAG_04024","SJAG_04644","SJAG_00118","SJAG_01143","SJAG_02274","SJAG_01783","SJAG_01309","SJAG_03970","SJAG_04077","SJAG_01407","SJAG_03010","SJAG_02587","SJAG_00185","SJAG_02248","SJAG_03704","SJAG_01748","SJAG_03690","SJAG_01448","SJAG_01863","SJAG_01135","SJAG_00610","SJAG_04275","SJAG_05179","SJAG_00054","SJAG_01458","SJAG_03718","SJAG_03593","SJAG_00514","SJAG_02626","SJAG_01516","SJAG_04479","SJAG_00223","SJAG_02492","SJAG_00152","SJAG_00115","SJAG_00173","SJAG_02878","SJAG_02323","SJAG_04413","SJAG_02277","SJAG_03851","SJAG_04018","SJAG_03705","SJAG_00638","SJAG_00946","SJAG_01229","SJAG_01848","SJAG_05245","SJAG_04963","SJAG_00368","SJAG_01382","SJAG_03488","SJAG_00268","SJAG_16459","SJAG_02004","SJAG_MIT09","SJAG_01787","SJAG_00355","SJAG_04001","SJAG_01945","SJAG_02989","SJAG_00970","SJAG_00724","SJAG_00405","SJAG_04370","SJAG_00700","SJAG_00314","SJAG_00663","SJAG_02728","SJAG_03563","SJAG_04010","SJAG_02912","SJAG_04417","SJAG_03596","SJAG_01305","SJAG_01519","SJAG_01564","SJAG_00117","SJAG_01116","SJAG_00821","SJAG_00216","SJAG_02177","SJAG_03246","SJAG_02166","SJAG_01769","SJAG_02414","SJAG_04575","SJAG_01794","SJAG_04470","SJAG_02392","SJAG_04960","SJAG_00467","SJAG_02278","SJAG_01324","SJAG_01329","SJAG_03247","SJAG_04206","SJAG_02426","SJAG_03250","SJAG_02852","SJAG_02572","SJAG_01722","SJAG_01866","SJAG_04221","SJAG_03847","SJAG_03756","SJAG_03710","SJAG_04219","SJAG_04600","SJAG_00971","SJAG_00907","SJAG_02902","SJAG_04648","SJAG_02468","SJAG_05261","SJAG_01590","SJAG_02375","SJAG_02657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86009,86897,87584,87588,87927,88196,88459,91041,91048,91070,91097,93010,97309,98742,98931,99004,99343,101902,102073,102386,102957,103092,103591,103720,106542,107933,110878,112245,112329,113076,113913,113927,114165,115068],"is_not":false,"summary":null,"term":"GO:0008289"},{"annotations":[102084,104273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[102656,102267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901612"},{"annotations":[113541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097001"},{"annotations":[112550,98821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019992"},{"annotations":[99553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"},{"annotations":[98689,90349,105433,112275,104274,107386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"},{"annotations":[102269,102660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070300"},{"annotations":[111799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[109714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008429"},{"annotations":[104807,111254,93554,103698,114012,95065,103437,108920,113575,97797,101030,115022,88391,89583,62287,110825,99511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035091"},{"annotations":[91962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[84221,98507,113490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[93707,96364,95410,94702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[95782,95915,108518,105712,92037,104720,111275,86706,87609,96365,93708,97792,95914,105859,106058,94703,100891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[113077,97839,86874,98000,97849,102661,95411,85749,102085,114979,95374,110935,84153,114511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[96198,90609,94808,95375,98508,108558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"},{"annotations":[84154,98509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001786"},{"annotations":[114951,99345,101467,100363,98510,104760,88689,102804,114688,114981,87823,100124,92516,108368,84253,97867,91081,87948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005543"},{"annotations":[104707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046625"},{"annotations":[90739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005496"},{"annotations":[102387,86548,105919,97745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032934"}]},"cv_name":"molecular_function","definition":"Binding to a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":122,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00223":null,"SJAG_00268":null,"SJAG_00314":null,"SJAG_00355":null,"SJAG_00368":null,"SJAG_00405":null,"SJAG_00467":null,"SJAG_00514":null,"SJAG_00610":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00724":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00946":null,"SJAG_00970":null,"SJAG_00971":null,"SJAG_01116":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01309":null,"SJAG_01324":null,"SJAG_01329":null,"SJAG_01382":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01448":null,"SJAG_01458":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01564":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01848":null,"SJAG_01863":null,"SJAG_01866":null,"SJAG_01945":null,"SJAG_02004":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02274":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02392":null,"SJAG_02414":null,"SJAG_02426":null,"SJAG_02468":null,"SJAG_02492":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02657":null,"SJAG_02707":null,"SJAG_02728":null,"SJAG_02852":null,"SJAG_02878":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_02982":null,"SJAG_02989":null,"SJAG_03010":null,"SJAG_03246":null,"SJAG_03247":null,"SJAG_03250":null,"SJAG_03405":null,"SJAG_03488":null,"SJAG_03563":null,"SJAG_03593":null,"SJAG_03596":null,"SJAG_03690":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03756":null,"SJAG_03847":null,"SJAG_03851":null,"SJAG_03970":null,"SJAG_04001":null,"SJAG_04010":null,"SJAG_04018":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04206":null,"SJAG_04219":null,"SJAG_04221":null,"SJAG_04275":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04470":null,"SJAG_04479":null,"SJAG_04575":null,"SJAG_04600":null,"SJAG_04644":null,"SJAG_04648":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_16459":null,"SJAG_MIT09":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipid binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0008289","terms_by_termid":{"GO:0001786":null,"GO:0005496":null,"GO:0005543":null,"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0008142":null,"GO:0008289":null,"GO:0008429":null,"GO:0019992":null,"GO:0031210":null,"GO:0032266":null,"GO:0032934":null,"GO:0035091":null,"GO:0036042":null,"GO:0046625":null,"GO:0070273":null,"GO:0070300":null,"GO:0080025":null,"GO:0097001":null,"GO:1901612":null,"GO:1901981":null}}


id: PBO:0073609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 1","termid":"PBO:0073609"}


id: GO:0033931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-galactosaminidic linkages in poly(D-galactosamine).","definition_xrefs":["EC:3.2.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"endogalactosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.109-RXN"],"synonyms":[{"name":"galactosaminoglycan glycanohydrolase activity","type":"related"}],"termid":"GO:0033931"}


id: GO:0071295
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071295","terms_by_termid":{"GO:0036245":null}}


id: GO:1900686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of gerfelin biosynthetic process","synonyms":[{"name":"regulation of gerfelin anabolism","type":"exact"},{"name":"regulation of gerfelin biosynthesis","type":"exact"},{"name":"regulation of gerfelin formation","type":"exact"},{"name":"regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900686"}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_03680","SJAG_01777","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102008,110048],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[85897,102006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0031122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: GO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase V core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in production of noncoding transcripts at target loci for silencing.","definition_xrefs":["PMID:19110459","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase V core binding","termid":"GO:0001049"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["MP:0009837","GOC:cjm","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: FYPO:0004341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed mitochondrial fission during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of mitochondrial division","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to H2O2","type":"exact"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitochondrial fission during vegetative growth","type":"exact"},{"name":"delayed onset of mitochondrial proliferation","type":"related"}],"termid":"FYPO:0004341"}


id: PBO:0056110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 1","termid":"PBO:0056110"}


id: SO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA sequence that has catalytic activity with or without an associated ribonucleoprotein.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"enzymatic","termid":"SO:0001185"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic_RNA","synonyms":[{"name":"enzymatic RNA","type":"exact"}],"termid":"SO:0000372"}


id: PATO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001102 absolute stiffness value (obsolete PATO:0001102)","termid":"PATO:0001102"}


id: GO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"tetraterpenoid catabolic process","synonyms":[{"name":"tetraterpene catabolic process","type":"narrow"},{"name":"tetraterpene catabolism","type":"narrow"},{"name":"tetraterpenoid breakdown","type":"exact"},{"name":"tetraterpenoid catabolism","type":"exact"},{"name":"tetraterpenoid degradation","type":"exact"}],"termid":"GO:0016110"}


id: PBO:0027249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity","termid":"PBO:0027249"}


id: PATO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000244 ocular reflex (obsolete PATO:0000244)","termid":"PATO:0000244"}


id: PBO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC-like protein, predicted cation transport regulator","termid":"PBO:0004648"}


id: PBO:0065785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiescin sulfhydryl oxidase 1","termid":"PBO:0065785"}


id: PBO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19 (predicted)","termid":"PBO:0000320"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: PBO:0068289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEK-C17orf49 readthrough","termid":"PBO:0068289"}


id: PBO:0041679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 4","termid":"PBO:0041679"}


id: GO:0034176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"negative regulation of TLR12 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034176"}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: PBO:0005290
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by Cuf1","termid":"PBO:0005290"}


id: GO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell within or between different tissues and organs of the body.","definition_xrefs":["CL:0000451","GOC:nhn","PMID:19339990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell migration","termid":"GO:0036336"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22700048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: PBO:0082193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldose reductase; involved in methylglyoxal, d-xylose, arabinose, and galactose metabolism; stress induced (osmotic, ionic, oxidative, heat shock, starvation and heavy metals); regulated by HOG pathway; overexpression allows xylose fermentation in strains expressing heterologous xylitol dehydrogenase and xylulokinase; protein abundance increases in response to DNA replication stress","termid":"PBO:0082193"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: PBO:0074588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 4","termid":"PBO:0074588"}


id: GO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-zeaxanthin + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-violaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:32443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeaxanthin epoxidase activity","secondary_identifiers":["MetaCyc:RXN-7979","RHEA:24084","GO:0009540","MetaCyc:RXN-7978","KEGG_REACTION:R06947","KEGG_REACTION:R07199","EC:1.14.15.21","KEGG_REACTION:R07200","GO:0052663","KEGG_REACTION:R06946"],"synonyms":[{"name":"antheraxanthin epoxidase activity","type":"narrow"},{"name":"zea-epoxidase activity","type":"related"},{"name":"zeaxanthin epoxidase [overall] activity","type":"related"}],"termid":"GO:0052662"}


id: PBO:0059861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein-like 3, pseudogene","termid":"PBO:0059861"}


id: PBO:0068929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 172, pseudogene","termid":"PBO:0068929"}


id: PBO:0088141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein with a possible role in sequestering heavy metals; involved in the oxidative stress response and modulation of replicative lifespan; undergoes autophosphorylation, which is abolished by mutation of Asp781 in the catalytic motif (D781N); P5 ATPase subfamily member with similarity to yeast Spf1p and homology of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome","termid":"PBO:0088141"}


id: PBO:0055370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2799","termid":"PBO:0055370"}


id: GO:1901927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cadinene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cadinene catabolic process","synonyms":[{"name":"cadinene breakdown","type":"exact"},{"name":"cadinene catabolism","type":"exact"},{"name":"cadinene degradation","type":"exact"}],"termid":"GO:1901927"}


id: PBO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 7","termid":"PBO:0047436"}


id: PR:O00084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.11c","synonyms":[{"name":"Spom972h-ure2","type":"exact"},{"name":"urea amidohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00084"}


id: PR:Q09682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00166","PANTHER:PTHR11599:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.01c","secondary_identifiers":["UniProtKB:Q09682"],"synonyms":[{"name":"Spom972h-PSMA4","type":"exact"}],"termid":"PR:Q09682"}


id: GO:0018471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzaldehyde + 2 H2O = 4-chlorobenzoate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-chlorobenzaldehyde oxidase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018471"}


id: GO:1904115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasm that is part of a axon.","definition_xrefs":["PMID:18667152","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axon cytoplasm","synonyms":[{"name":"axoplasm","type":"exact"}],"termid":"GO:1904115"}


id: GO:0106328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","termid":"GO:0047224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.147"],"termid":"GO:0106328"}


id: GO:0042668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"auditory receptor cell fate commitment","termid":"GO:0009912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell fate determination","synonyms":[{"name":"auditory hair cell fate determination","type":"exact"}],"termid":"GO:0042668"}


id: SO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified base in which adenine has been methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_DNA_base_feature","termid":"SO:0000306"},{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_adenine","synonyms":[{"name":"methylated A","type":"exact"},{"name":"methylated adenine","type":"exact"},{"name":"methylated adenine base","type":"exact"},{"name":"methylated adenine residue","type":"exact"},{"name":"methylated_A","type":"exact"}],"termid":"SO:0000161"}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: PBO:0028213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenic-containing_substance","termid":"PBO:0028213"}


id: GO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion homeostasis (obsolete GO:0055072)","synonyms":[{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0055072"}


id: PBO:0053907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1201","termid":"PBO:0053907"}


id: FYPO:0005921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005921"}


id: PR:O14264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfg10 gene.","definition_xrefs":["UniProtKB:O14264","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.09c","synonyms":[{"name":"Spom972h-dfg10","type":"exact"}],"termid":"PR:O14264"}


id: GO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus activates or increases the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:bf","VZ:846","UniProtKB-KW:KW-1072","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"modulation by virus of host autophagy","termid":"GO:0039519"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"induction by virus of host autophagy","secondary_identifiers":["GO:0075044"],"synonyms":[{"name":"activation of host autophagy by virus","type":"exact"},{"name":"autophagy of host cells involved in interaction with symbiont","type":"related"},{"name":"positive regulation by virus of host autophagy","type":"broad"}],"termid":"GO:0039520"}


id: GO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-hydroxyphytanate + O2 = 2-oxophytanate + H2O2.","definition_xrefs":["RHEA:21680","EC:1.1.3.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxyphytanate oxidase activity","secondary_identifiers":["KEGG_REACTION:R07151","MetaCyc:HYDROXYPHYTANATE-OXIDASE-RXN"],"synonyms":[{"name":"L-2-hydroxyphytanate:oxygen 2-oxidoreductase","type":"broad"}],"termid":"GO:0047996"}


id: PBO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 4","termid":"PBO:0070538"}


id: GO:0120019
data:
  {"annotated_genes":["SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93651],"is_not":false,"summary":null,"term":"GO:0120019"}]},"cv_name":"molecular_function","definition":"Removes phosphatidylcholine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","PMID:24220498","PMID:20823909","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"phosphatidylcholine transfer activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483219","Reactome:R-HSA-1483087","Reactome:R-HSA-1483211"],"synonyms":[{"name":"intermembrane phosphatidylcholine transfer activity","type":"narrow"},{"name":"phosphatidylcholine carrier activity","type":"exact"}],"termid":"GO:0120019","terms_by_termid":{"GO:0120019":null}}


id: GO:1990763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the arrestin family, proteins involved in agonist-mediated desensitization of G protein-coupled receptors.","definition_xrefs":["PMID:23911909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"arrestin family protein binding","termid":"GO:1990763"}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: FYPO:0005192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress","termid":"FYPO:0005191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to nitrogen starvation","synonyms":[{"name":"normal cellular response to nitrogen depletion","type":"exact"},{"name":"normal cellular response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005192"}


id: PBO:0045540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 2","termid":"PBO:0045540"}


id: GO:0061389
data:
  {"annotated_genes":["SJAG_01456","SJAG_04322","SJAG_03486","SJAG_03705","SJAG_04724","SJAG_02838","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84215,102914,106825,99568,95815,112529,113920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"Any process that modulates the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of direction of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061389","terms_by_termid":{"GO:0051523":null}}


id: PBO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog (predicted)","termid":"PBO:0004085"}


id: GO:0005112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Notch (N) protein, a surface receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Notch binding","synonyms":[{"name":"N binding","type":"exact"},{"name":"N ligand","type":"narrow"},{"name":"Notch ligand","type":"narrow"},{"name":"Notch receptor binding","type":"exact"}],"termid":"GO:0005112"}


id: PBO:0054019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1349","termid":"PBO:0054019"}


id: GO:0070125
data:
  {"annotated_genes":["SJAG_04862","SJAG_03461","SJAG_02353","SJAG_05271","SJAG_04064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77874,98963,107579,108205,108924],"is_not":false,"summary":null,"term":"GO:0070125"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02353":null,"SJAG_03461":null,"SJAG_04064":null,"SJAG_04862":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial translation elongation","type":"exact"}],"termid":"GO:0070125","terms_by_termid":{"GO:0070125":null}}


id: PBO:0039325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase pseudogene 2","termid":"PBO:0039325"}


id: PBO:0081037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 13","termid":"PBO:0081037"}


id: PBO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-1","termid":"PBO:0051202"}


id: PBO:0047972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frey regulator of sperm-oocyte fusion 1","termid":"PBO:0047972"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PR:Q9C0X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB8E5.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB8E5.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.10","synonyms":[{"name":"Spom972h-SPAPB8E5.10","type":"exact"}],"termid":"PR:Q9C0X5"}


id: SO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_UTR","synonyms":[{"name":"internal UTR","type":"exact"}],"termid":"SO:0000241"}


id: PBO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030521"}


id: PBO:0054150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1517","termid":"PBO:0054150"}


id: PBO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faster evolving duplicate","termid":"PBO:0009798"}


id: PBO:0088885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1","termid":"PBO:0088885"}


id: GO:1990835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of an insulin-like growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:21993393"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin-like growth factor production (obsolete GO:1990835)","synonyms":[{"name":"IGF production","type":"related"}],"termid":"GO:1990835"}


id: MOD:01364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:11467524","Unimod:478#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site S","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01364"}


id: FYPO:0004127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 at protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"decreased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004127"}


id: PBO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 2","termid":"PBO:0061080"}


id: GO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pronucleus originating from the spermatozoa that was involved in fertilization.","definition_xrefs":["ISBN:0198506732","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronucleus","termid":"GO:0045120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"male pronucleus","termid":"GO:0001940"}


id: GO:1900722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein adenylylation","synonyms":[{"name":"regulation of protein AMPylation","type":"exact"},{"name":"regulation of protein adenylation","type":"exact"},{"name":"regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900722"}


id: PR:Q10174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27F1.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C27F1.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.05c","synonyms":[{"name":"Spom972h-SPAC27F1.05c","type":"exact"}],"termid":"PR:Q10174"}


id: PBO:0053303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 homolog A","termid":"PBO:0053303"}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: GO:0038073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in conjugation with cellular fusion (obsolete GO:0038073)","synonyms":[{"name":"MAP3K activity involved in conjugation with cellular fusion","type":"exact"},{"name":"MAPKKK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038073"}


id: PBO:0055946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 55","termid":"PBO:0055946"}


id: PBO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 1","termid":"PBO:0075319"}


id: PBO:0000038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase interaction types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_physically","termid":"PBO:0000038"}


id: PBO:0078519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 9","termid":"PBO:0078519"}


id: GO:0032473
data:
  {"annotated_genes":["SJAG_03345","SJAG_01134","SJAG_04732","SJAG_05268","SJAG_03464","SJAG_00605","SJAG_00368","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85390,95339,96597,98583,100531,100872,102648,111810],"is_not":false,"summary":null,"term":"GO:0032473"}]},"cv_name":"cellular_component","definition":"The external (cytoplasmic) face of the mitochondrial outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_04732":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"cytoplasmic side of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosolic side of mitochondrial outer membrane","type":"exact"},{"name":"external leaflet of mitochondrial outer membrane","type":"exact"},{"name":"external side of mitochondrial envelope","type":"related"},{"name":"external side of mitochondrial outer membrane","type":"exact"}],"termid":"GO:0032473","terms_by_termid":{"GO:0032473":null}}


id: PBO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 1","termid":"PBO:0050299"}


id: GO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.","definition_xrefs":["PMID:30700128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemostasis","termid":"GO:0007599"},{"relation_name":"is_a","term_name":"coagulation","termid":"GO:0050817"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood coagulation","secondary_identifiers":["Wikipedia:Coagulation"],"synonyms":[{"name":"blood clotting","type":"exact"}],"termid":"GO:0007596"}


id: GO:0015795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sorbitol across a membrane. Sorbitol, also known as glucitol, is the hexitol derived by the reduction of the aldehyde group of glucose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"sorbitol transmembrane transport","synonyms":[{"name":"glucitol transport","type":"exact"},{"name":"sorbitol transport","type":"broad"}],"termid":"GO:0015795"}


id: SO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide match against a sequence from another organism.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cross_genome_match","synonyms":[{"name":"cross genome match","type":"exact"}],"termid":"SO:0000177"}


id: GO:1905087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bioluminescence.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:10913092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of bioluminescence","termid":"GO:1905085"},{"relation_name":"positively_regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bioluminescence","synonyms":[{"name":"activation of bioluminescence","type":"narrow"},{"name":"up regulation of bioluminescence","type":"exact"},{"name":"up-regulation of bioluminescence","type":"exact"},{"name":"upregulation of bioluminescence","type":"exact"}],"termid":"GO:1905087"}


id: FYPO:0001605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cytosol","synonyms":[{"name":"decreased cytosolic level of substance","type":"exact"},{"name":"decreased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in cytosol during vegetative growth","type":"exact"},{"name":"reduced level of substance in cytosol","type":"exact"}],"termid":"FYPO:0001605"}


id: GO:0019881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete streptomycin susceptibility/resistance (obsolete GO:0019881)","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"exact"}],"termid":"GO:0019881"}


id: PBO:0085635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in histone H4 acetylation at ribosomal protein genes; interacts with and modulates NuA4 histone acetyltransferase complex; required for growth on glycerol as a carbon source; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a segment predicted to resemble the winged-helix/forkhead domain located in DNA-binding proteins","termid":"PBO:0085635"}


id: PBO:0061641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 19","termid":"PBO:0061641"}


id: PBO:0029995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation_index","termid":"PBO:0029995"}


id: FYPO:0006719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission does not occur during a cellular response to osmotic stress. Normally, mitochondria undergo fission when the cell is exposed to hyperosmotic conditions.","definition_xrefs":["PMID:28515144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial fission","termid":"FYPO:0004340"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished mitochondrial fission during cellular response to osmotic stress","synonyms":[{"name":"abolished mitochondrial fission during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial fission during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"abolished mitochondrial fragmentation during cellular response to osmotic stress","type":"exact"},{"name":"mitochondrial fission abolished during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006719"}


id: GO:0035575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the methyl group from a modified lysine residue at position 20 of the histone H4 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:26214369","PMID:32209475","PMID:20622853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H4 demethylase activity","termid":"GO:0141058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0032452","GO:0003824","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histone H4K20 demethylase activity","secondary_identifiers":["Reactome:R-HSA-2172678"],"synonyms":[{"name":"histone H4-K20 demethylase activity","type":"exact"},{"name":"histone H4-methyl-lysine-20 demethylase activity","type":"exact"},{"name":"histone H4K20me demethylase activity","type":"exact"},{"name":"histone demethylase activity (H4-K20 specific)","type":"exact"},{"name":"histone demethylase activity (H4K20-specific)","type":"exact"}],"termid":"GO:0035575"}


id: PBO:0069684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 961, pseudogene","termid":"PBO:0069684"}


id: PBO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1","termid":"PBO:0047820"}


id: PATO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile","termid":"PATO:0000956"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0089766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase","termid":"PBO:0089766"}


id: PBO:0084920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular tether on nuclear membrane; mediates contact by interacting with Tom70p on mitochondria; protein abundance is regulated by phosphatidylcholine, enabling coupling of phospholipid homeostasis with contact extent","termid":"PBO:0084920"}


id: PBO:0091573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mis6-Sim4 complex subunit Fta6","termid":"PBO:0091573"}


id: PBO:0089466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","termid":"PBO:0089466"}


id: GO:0070237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation-induced cell death of T cells.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activation-induced cell death of T cells","termid":"GO:0070235"},{"relation_name":"positively_regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation-induced cell death of T cells","synonyms":[{"name":"activation of activation-induced cell death of T cells","type":"narrow"},{"name":"positive regulation of AICD","type":"broad"},{"name":"positive regulation of activated T cell apoptosis","type":"broad"},{"name":"positive regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"positive regulation of antigen-driven apoptosis","type":"broad"},{"name":"stimulation of activation-induced cell death of T cells","type":"narrow"},{"name":"up regulation of activation-induced cell death of T cells","type":"exact"},{"name":"up-regulation of activation-induced cell death of T cells","type":"exact"},{"name":"upregulation of activation-induced cell death of T cells","type":"exact"}],"termid":"GO:0070237"}


id: GO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological muscle hypertrophy","termid":"GO:0003298"}


id: PBO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 29","termid":"PBO:0045278"}


id: PR:P31318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arg11, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.09c","synonyms":[{"name":"Spom972h-arg11","type":"exact"}],"termid":"PR:P31318"}


id: GO:0070226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a perthiol + 4 Fe3+ + 3 H2O = sulfite + a thiol + 4 Fe2+ + 8 H+.","definition_xrefs":["MetaCyc:SULFFEOXIDO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfur:ferric ion oxidoreductase activity","synonyms":[{"name":"hydrogen sulfide:ferric ion oxidoreductase","type":"exact"}],"termid":"GO:0070226"}


id: GO:0005126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine receptor.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cytokine receptor binding","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor binding","type":"exact"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor ligand","type":"narrow"}],"termid":"GO:0005126"}


id: PBO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4","termid":"PBO:0046346"}


id: PBO:0054433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1829","termid":"PBO:0054433"}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: PBO:0075438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N3","termid":"PBO:0075438"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:25902521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: PATO:0000516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having sensitivity toward an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive toward","synonyms":[{"name":"sensitive","type":"exact"}],"termid":"PATO:0000516"}


id: FYPO:0006429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","termid":"FYPO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006429"}


id: PBO:0076273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 1 like","termid":"PBO:0076273"}


id: PBO:0072332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 18","termid":"PBO:0072332"}


id: GO:2000522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of immunological synapse formation","termid":"GO:2000520"},{"relation_name":"positively_regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunological synapse formation","synonyms":[{"name":"positive regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000522"}


id: GO:0032005
data:
  {"annotated_genes":["SJAG_02379","SJAG_00781","SJAG_03340","SJAG_00993","SJAG_01345","SJAG_03623","SJAG_01718","SJAG_02923","SJAG_02233","SJAG_03453","SJAG_01978","SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86973,102435,107422,111629],"is_not":false,"summary":null,"term":"GO:0032005"},{"annotations":[89417],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[85371,88288,92476,102333,93147,89418],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[103200,84302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"The series of molecular signals that bring about the relay, amplification or dampening of a signal generated in response to a cue, such as starvation or pheromone exposure, in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02379":null,"SJAG_02923":null,"SJAG_03340":null,"SJAG_03453":null,"SJAG_03623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032005","terms_by_termid":{"GO:0000750":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null}}


id: GO:0019440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including indole-3-acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tryptophan catabolic process to indole-3-acetate","secondary_identifiers":["MetaCyc:TRPIAACAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to IAA","type":"exact"},{"name":"tryptophan catabolic process to indoleacetic acid","type":"exact"},{"name":"tryptophan catabolism to indoleacetic acid","type":"exact"},{"name":"tryptophan degradation to indole-3-acetate","type":"exact"}],"termid":"GO:0019440"}


id: PBO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT complex RNA-binding protein subunit Rcd1","termid":"PBO:0036368"}


id: PBO:0057005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 99a","termid":"PBO:0057005"}


id: PR:O74395
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- str1 gene.","definition_xrefs":["UniProtKB:O74395","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore iron transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.09","synonyms":[{"name":"Spom972h-str1","type":"exact"}],"termid":"PR:O74395"}


id: GO:1900415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of fungal-type cell wall biogenesis.","definition_xrefs":["GOC:TermGenie","PMID:15509866","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900415)","synonyms":[{"name":"regulation of chitin- and beta-glucan-containing cell wall biogenesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900415"}


id: PBO:0054525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1925","termid":"PBO:0054525"}


id: PBO:0085495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome activator; binds the core proteasome (CP) and stimulates proteasome-mediated protein degradation by inducing gate opening; required for sequestering CP into proteasome storage granule (PSG) during quiescent phase and for nuclear import of CP in proliferating cells; required for resistance to bleomycin, may be involved in protecting against oxidative damage; similar to mammalian PA200","termid":"PBO:0085495"}


id: PBO:0072348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 34","termid":"PBO:0072348"}


id: PBO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in trancription (predicted)","termid":"PBO:0004614"}


id: PBO:0030159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin","termid":"PBO:0030159"}


id: PBO:0042506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 26","termid":"PBO:0042506"}


id: GO:0070512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 20 of histone H4.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4-K20 methylation (obsolete GO:0070512)","synonyms":[{"name":"activation of histone H4-K20 methylation","type":"narrow"},{"name":"stimulation of histone H4-K20 methylation","type":"narrow"},{"name":"up regulation of histone H4-K20 methylation","type":"exact"},{"name":"up-regulation of histone H4-K20 methylation","type":"exact"},{"name":"upregulation of histone H4-K20 methylation","type":"exact"}],"termid":"GO:0070512"}


id: PBO:0049373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 3","termid":"PBO:0049373"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_01943","SJAG_01993","SJAG_00279","SJAG_01894","SJAG_04703","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88427,88611,94984,84416,114648,110374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: PBO:0078026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 16","termid":"PBO:0078026"}


id: GO:0043260
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha5, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-11 complex","synonyms":[{"name":"laminin-521 complex","type":"exact"}],"termid":"GO:0043260"}


id: PR:Q9P790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02667","PRO:DNx","PANTHER:PTHR13275:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR complex protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.13c","secondary_identifiers":["UniProtKB:Q9P790"],"synonyms":[{"name":"Spom972h-VPS72","type":"exact"}],"termid":"PR:Q9P790"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["PubMed:8876649","RESID:AA0132","ChEBI:15618","PubMed:14588022","PubMed:3208761","Unimod:388#C","PubMed:3838747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: GO:0015891
data:
  {"annotated_genes":["SJAG_04743","SJAG_02735","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108852],"is_not":false,"summary":null,"term":"GO:0015891"},{"annotations":[106846,61324,61568,106845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"}]},"cv_name":"biological_process","definition":"The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"siderophore transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015892"],"synonyms":[{"name":"iron-siderochrome transport","type":"narrow"},{"name":"iron-siderophore transport","type":"exact"},{"name":"siderochrome transport","type":"narrow"},{"name":"siderophore-iron transport","type":"exact"}],"termid":"GO:0015891","terms_by_termid":{"GO:0015891":null,"GO:0044718":null}}


id: FYPO:0001938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0002114","FYPO:0000002","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased cytochrome-c oxidase activity","synonyms":[{"name":"reduced cytochrome-c oxidase activity","type":"exact"}],"termid":"FYPO:0001938"}


id: PBO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl3","termid":"PBO:0004956"}


id: PBO:0001809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag1","termid":"PBO:0001809"}


id: PBO:0045814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 4","termid":"PBO:0045814"}


id: PBO:0057037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130a","termid":"PBO:0057037"}


id: PBO:0086711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene","termid":"PBO:0086711"}


id: PBO:0090875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase","termid":"PBO:0090875"}


id: PBO:0070905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 13","termid":"PBO:0070905"}


id: GO:0016016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An opsin with maximal absorption between 400 and 500 nm.","definition_xrefs":["PMID:10594055"],"gene_count":0,"genotype_count":0,"name":"obsolete short-wave-sensitive opsin (obsolete GO:0016016)","synonyms":[{"name":"short-wave-sensitive opsin","type":"exact"}],"termid":"GO:0016016"}


id: PBO:0059183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin pseudogene 1","termid":"PBO:0059183"}


id: GO:0098620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ser-tRNA(Sec) + ATP = Sep-tRNA(Sec) + ADP.","definition_xrefs":["PMID:15317934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140101","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"seryl-selenocysteinyl-tRNA kinase activity","secondary_identifiers":["Reactome:R-HSA-2408507"],"termid":"GO:0098620"}


id: GO:0032434
data:
  {"annotated_genes":["SJAG_00052","SJAG_00642","SJAG_00475","SJAG_03048","SJAG_00071","SJAG_03699","SJAG_02485","SJAG_02723","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110678],"is_not":false,"summary":null,"term":"GO:0032434"},{"annotations":[98443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103011,86531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[107771,113107,104957,102719,98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032434","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:26654377","PMID:25447994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: PBO:0047003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A6, pseudogene","termid":"PBO:0047003"}


id: PBO:0041554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 33","termid":"PBO:0041554"}


id: GO:0080010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["PMID:18450450"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0080010)","synonyms":[{"name":"regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0080010"}


id: PBO:0062277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 8 (gene/pseudogene)","termid":"PBO:0062277"}


id: PBO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str1","termid":"PBO:0000368"}


id: PBO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1AR divergent transcript","termid":"PBO:0039643"}


id: PR:Q9USU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efc25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras guanine nucleotide exchange factor efc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.03","synonyms":[{"name":"Spom972h-efc25","type":"exact"},{"name":"exchange factor cdc25p-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU1"}


id: GO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune system process","termid":"GO:0002682"}


id: GO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma glycoprotein (obsolete GO:0005211)","synonyms":[{"name":"plasma glycoprotein","type":"exact"}],"termid":"GO:0005211"}


id: PBO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase (predicted)","termid":"PBO:0003474"}


id: GO:0035860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a glial cell-derived neurotrophic factor receptor.","definition_xrefs":["PMID:12953054","GOC:yaf","PMID:29245123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"GDNF receptor signaling pathway","type":"exact"},{"name":"glial cell derived neurotrophic factor receptor signaling pathway","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor signalling pathway","type":"exact"},{"name":"glial cell-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0035860"}


id: GO:0047986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + S(2-) = CoA + thioacetate.","definition_xrefs":["RHEA:16625","EC:2.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"hydrogen-sulfide S-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01850","MetaCyc:HYDROGEN-SULFIDE-S-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:hydrogen-sulfide S-acetyltransferase activity","type":"related"},{"name":"hydrogen-sulfide acetyltransferase activity","type":"related"},{"name":"hydrogen-sulphide S-acetyltransferase activity","type":"exact"}],"termid":"GO:0047986"}


id: PBO:0048208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma1","termid":"PBO:0048208"}


id: GO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process modulates the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of turgor in appressorium (obsolete GO:0075040)","synonyms":[{"name":"regulation of turgor formation in appressorium","type":"related"}],"termid":"GO:0075040"}


id: PBO:0054424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1820","termid":"PBO:0054424"}


id: GO:0021963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the spinothalamic tract, one of the major routes of nociceptive signaling.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinothalamic tract morphogenesis","synonyms":[{"name":"dorsolateral tract of Lissauer morphogenesis","type":"exact"}],"termid":"GO:0021963"}


id: PBO:0070010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1307, pseudogene","termid":"PBO:0070010"}


id: PBO:0057121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 205","termid":"PBO:0057121"}


id: GO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"}


id: PBO:0004390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR93","termid":"PBO:0004390"}


id: PBO:0081967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 1","termid":"PBO:0081967"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: MOD:01017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00403. Remap to MOD:00403.","definition_xrefs":["DeltaMass:113"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01017 homoseryl (-Hse-) (obsolete MOD:01017)","termid":"MOD:01017"}


id: PBO:0060314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase 3","termid":"PBO:0060314"}


id: GO:0075069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection cushion of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection cushion to host","synonyms":[{"name":"adhesion of symbiont infection cushion to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075069"}


id: PBO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 32","termid":"PBO:0071566"}


id: FYPO:0004743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004743"}


id: PBO:0030078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_lysine_import_during_vegetative_growth","termid":"PBO:0030078"}


id: FYPO:0006207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament depolymerization, i.e. the removal of actin monomers from a filament, is decreased.","definition_xrefs":["PomBase:mah","PMID:16866873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin filament depolymerization","synonyms":[{"name":"decreased rate of actin filament depolymerisation","type":"exact"},{"name":"decreased rate of actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006207"}


id: PBO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit (predicted)","termid":"PBO:0001342"}


id: PBO:0081109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A divergent transcript","termid":"PBO:0081109"}


id: PBO:0044616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase domain containing","termid":"PBO:0044616"}


id: GO:1903112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24339919","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"},{"relation_name":"is_a","term_name":"positive regulation of single strand break repair","termid":"GO:1903518"},{"relation_name":"positively_regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"positive regulation of single-strand break repair via homologous recombination","synonyms":[{"name":"activation of single-strand break repair via homologous recombination","type":"narrow"},{"name":"up regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of single-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of single-strand break repair via homologous recombination","type":"exact"}],"termid":"GO:1903112"}


