# terms

id: PBO:0066277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member A, pseudogene","termid":"PBO:0066277"}


id: PBO:0025550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Psi1","termid":"PBO:0025550"}


id: GO:1903265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23453807","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"activation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of adipocytokine signaling pathway","type":"related"},{"name":"activation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of adipocytokine signaling pathway","type":"related"},{"name":"positive regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of adipocytokine signaling pathway","type":"related"},{"name":"up regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up-regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of adipocytokine signaling pathway","type":"related"},{"name":"up-regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"upregulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of adipocytokine signaling pathway","type":"related"},{"name":"upregulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:1903265"}


id: PR:P36582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pck1 gene.","definition_xrefs":["UniProtKB:P36582","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-like 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.14c","synonyms":[{"name":"Spom972h-pck1","type":"exact"}],"termid":"PR:P36582"}


id: PBO:0079260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 32","termid":"PBO:0079260"}


id: PBO:0054738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2147","termid":"PBO:0054738"}


id: GO:2001034
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103472],"is_not":false,"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair via nonhomologous end joining","termid":"GO:2001032"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of NHEJ","type":"exact"}],"termid":"GO:2001034","terms_by_termid":{"GO:2001034":null}}


id: GO:0002018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"part_of","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"renin-angiotensin regulation of aldosterone production","synonyms":[{"name":"renin-angiotensin control of aldosterone production","type":"related"}],"termid":"GO:0002018"}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: GO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of an acetyl group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone acetylation (obsolete GO:0016573)","termid":"GO:0016573"}


id: PR:Q10065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trk2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium transport protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.02c","synonyms":[{"name":"Spom972h-trk2","type":"exact"}],"termid":"PR:Q10065"}


id: GO:1904456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential.","definition_xrefs":["GO_REF:0000058","PMID:25126967","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"negative regulation of transmission of nerve impulse","termid":"GO:0051970"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"negatively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuronal action potential","synonyms":[{"name":"down-regulation of generation of action potential","type":"related"},{"name":"down regulation of generation of action potential","type":"related"},{"name":"down regulation of neuronal action potential","type":"exact"},{"name":"down-regulation of neuronal action potential","type":"exact"},{"name":"downregulation of generation of action potential","type":"related"},{"name":"downregulation of neuronal action potential","type":"exact"},{"name":"inhibition of generation of action potential","type":"related"},{"name":"inhibition of neuronal action potential","type":"narrow"},{"name":"negative regulation of generation of action potential","type":"related"}],"termid":"GO:1904456"}


id: PBO:0009107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I core factor complex subunit Rrn7","termid":"PBO:0009107"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: MOD:02046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-glutamine residue","synonyms":[{"name":"XlnkGln","type":"exact"}],"termid":"MOD:02046"}


id: PBO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn6 (predicted)","termid":"PBO:0004476"}


id: PBO:0087818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (19 kDa); involved in RNA polymerase II transcription initiation, similar to histone H4 with atypical histone fold motif of Spt3-like transcription factors","termid":"PBO:0087818"}


id: SO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Expressed in relatively constant amounts without regard to cellular environmental conditions such as the concentration of a particular substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_constitutive","synonyms":[{"name":"transcriptionally constitutive","type":"exact"}],"termid":"SO:0000124"}


id: PBO:0077643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor necrosis factor","termid":"PBO:0077643"}


id: GO:0120113
data:
  {"annotated_genes":["SJAG_01360","SJAG_03250","SJAG_03970","SJAG_01981","SJAG_00181","SJAG_01088","SJAG_01281","SJAG_00208","SJAG_03976"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84170,84248,84284,87182,87604,87737,101809,109366,110501],"is_not":false,"summary":null,"term":"GO:0120113"}]},"cv_name":"biological_process","definition":"A pathway targeting soluble cytosolic proteins to the vacuole lumen. It uses a selective autophagy receptor protein Nbr1, which is an ortholog of mammalian NBR1, and is remotely related to S. cerevisiae Cvt pathway receptor protein Atg19. Similar to the Cvt pathway, the cargos transported by this pathway are hydrolases, which presumably contribute to the hydrolytic activities in the vacuole lumen. Different from the Cvt pathway, this pathway does not require the macroautophagy machinery, but instead relies on the ESCRT machinery for cargo sequestration. This pathway is observed in the fission yeast S. pombe.","definition_xrefs":["PMID:26365378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to vacuole","termid":"GO:0006623"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00208":null,"SJAG_01088":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03970":null,"SJAG_03976":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"cytoplasm to vacuole targeting by the NVT pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localization by the Nbr1-mediated vacuolar targeting pathway","type":"exact"}],"termid":"GO:0120113","terms_by_termid":{"GO:0120113":null}}


id: PR:O94592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.02","synonyms":[{"name":"Spom972h-SPCC622.02","type":"exact"}],"termid":"PR:O94592"}


id: SO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3'-most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_clip","synonyms":[{"name":"3'-clip","type":"exact"},{"name":"three prime clip","type":"exact"}],"termid":"SO:0000557"}


id: PBO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor Alb1 (predicted)","termid":"PBO:0015692"}


id: GO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an organelle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an organelle to a microtubule, and ends when the organelle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"minus-end-directed organelle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed organelle distribution","type":"narrow"},{"name":"microtubule minus-end-directed organelle localization","type":"exact"}],"termid":"GO:0072385"}


id: PBO:0083641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile cell cortex structures associated with endocytosis; detected in phosphorylated state in mitochondria; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutant shows activation of Pkc1p/Ypk1p stress resistance pathways; member of BAR domain family; protein increases in abundance and relocalizes from plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0083641"}


id: PBO:0059775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 1","termid":"PBO:0059775"}


id: PBO:0078704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 6-1","termid":"PBO:0078704"}


id: GO:2000837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of androstenedione secretion","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000837"}


id: PBO:0051455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 6-57","termid":"PBO:0051455"}


id: PATO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000246 postural reflex (obsolete PATO:0000246)","termid":"PATO:0000246"}


id: MOD:01197
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-heptosyl-L-glutamine.","definition_xrefs":["Unimod:490#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-heptosyl-L-glutamine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01197"}


id: GO:0050952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of electrical stimulus","termid":"GO:0050952"}


id: GO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.","definition_xrefs":["GOC:jl","PMID:21048113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0023052","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NLRP3 inflammasome complex assembly","synonyms":[{"name":"NALP3 inflammasome complex assembly","type":"exact"},{"name":"NLRP3 inflammasome activation","type":"related"}],"termid":"GO:0044546"}


id: GO:1903244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.","definition_xrefs":["PMID:19287093","GOC:rl","GOC:BHF","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy in response to stress","termid":"GO:1903242"},{"relation_name":"positively_regulates","term_name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle hypertrophy in response to stress","synonyms":[{"name":"activation of cardiac muscle hypertrophy in response to stress","type":"narrow"},{"name":"up regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"up-regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"upregulation of cardiac muscle hypertrophy in response to stress","type":"exact"}],"termid":"GO:1903244"}


id: PBO:0090615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1","termid":"PBO:0090615"}


id: GO:0016612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:11566366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"molybdenum-iron nitrogenase complex","secondary_identifiers":["MetaCyc:CPLX-525","MetaCyc:CPLX-186"],"synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"related"}],"termid":"GO:0016612"}


id: PBO:0055622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3061","termid":"PBO:0055622"}


id: GO:0015166
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88673,94147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a polyol from one side of a membrane to the other. A polyol is any polyhydric alcohol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"polyol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-429571"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0015166","terms_by_termid":{"GO:0005366":null}}


id: PBO:0056475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 1","termid":"PBO:0056475"}


id: GO:0044345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring information from a stromal cell to an epithelial cell where it is received and interpreted, as part of prostate gland development.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stromal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"stromal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0044345"}


id: PBO:0028522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_zearalenone","termid":"PBO:0028522"}


id: PR:P87312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crooked neck-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03851","PANTHER:PTHR11246:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.11c","secondary_identifiers":["UniProtKB:P87312"],"synonyms":[{"name":"Spom972h-CRNKL1","type":"exact"},{"name":"complexed with cdc5 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87312"}


id: GO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism effects a change in viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral catalytic activity","termid":"GO:0044867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044866"}


id: PBO:0039128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen induced 1 pseudogene 1","termid":"PBO:0039128"}


id: PBO:0066045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 1","termid":"PBO:0066045"}


id: PBO:0029371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029371"}


id: SO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag produced from a single sequencing read from a RACE product; typically a few hundred base pairs long.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RST","synonyms":[{"name":"RACE sequence tag","type":"exact"}],"termid":"SO:0001467"}


id: PBO:0005452
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.21","termid":"PBO:0005452"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: PBO:0053095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3C","termid":"PBO:0053095"}


id: PR:Q9UUH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bmt2 gene.","definition_xrefs":["UniProtKB:Q9UUH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA adenine-N(1) methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.10","synonyms":[{"name":"Spom972h-bmt2","type":"exact"}],"termid":"PR:Q9UUH2"}


id: PBO:0054757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2168","termid":"PBO:0054757"}


id: PBO:0077978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 1-1","termid":"PBO:0077978"}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: PBO:0029982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_mononucleate_vegetative_cell","termid":"PBO:0029982"}


id: PR:P04551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P04551","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:P04551"}


id: GO:2000407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell extravasation","synonyms":[{"name":"regulation of T lymphocyte extravasation","type":"exact"},{"name":"regulation of T-cell extravasation","type":"exact"},{"name":"regulation of T-lymphocyte extravasation","type":"exact"}],"termid":"GO:2000407"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: GO:0015648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lipid-linked peptidoglycan transporter activity","synonyms":[{"name":"lipid-linked murein transporter activity","type":"exact"}],"termid":"GO:0015648"}


id: PBO:0051689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INMT-MINDY4 readthrough (NMD candidate)","termid":"PBO:0051689"}


id: PBO:0075278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 3","termid":"PBO:0075278"}


id: GO:1904132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in neural plate elongation","synonyms":[{"name":"activation of convergent extension involved in neural plate elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"upregulation of convergent extension involved in neural plate elongation","type":"exact"}],"termid":"GO:1904132"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["RHEA:17889","EC:4.2.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: GO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity (obsolete GO:0000188)","synonyms":[{"name":"inactivation of MAPK during sporulation","type":"narrow"},{"name":"termination of MAPK activity","type":"exact"}],"termid":"GO:0000188"}


id: PBO:0029977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_export_from_nucleus","termid":"PBO:0029977"}


id: PBO:0067278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 357, pseudogene","termid":"PBO:0067278"}


id: GO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a virion.","definition_xrefs":["PMID:213106","GOC:rph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion membrane","termid":"GO:0055036"}


id: GO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R + CMP-N-acetyl-beta-neuraminate = alpha-N-acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->3)-[N-acetyl-alpha-neuraminyl-(2->6)]-N-acetyl-D-galactosaminyl-R + CMP.","definition_xrefs":["RHEA:53896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity","secondary_identifiers":["Reactome:R-HSA-981809","KEGG_REACTION:R04635","MetaCyc:2.4.99.7-RXN","EC:2.4.3.7"],"synonyms":[{"name":"(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity","type":"exact"},{"name":"NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"ST6GALNAC activity","type":"related"},{"name":"alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide-alpha-2,6-sialyltransferase activity","type":"related"},{"name":"sialyltransferase activity","type":"related"}],"termid":"GO:0047290"}


id: MOD:01231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(13)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:11857757","PubMed:11999733","PubMed:12175151","Unimod:59#K","PubMed:12442261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3x(13)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent heavy form (+3amu), N-term & K","type":"related"},{"name":"Propionyl:13C(3)","type":"related"}],"termid":"MOD:01231"}


id: PBO:0060003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 23","termid":"PBO:0060003"}


id: PBO:0087517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved ssDNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; promotes recruitment, helicase and nuclease activities of Dna2p; role in DNA catenation/decatenation pathway of chromosome disentangling; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087517"}


id: PBO:0040419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 4","termid":"PBO:0040419"}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: PBO:0053154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 3","termid":"PBO:0053154"}


id: GO:0008100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any member of the major class of lipid-transporting proteins found in the hemolymph of insects.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete lipophorin (obsolete GO:0008100)","synonyms":[{"name":"lipophorin","type":"exact"}],"termid":"GO:0008100"}


id: PBO:0004519
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.12","termid":"PBO:0004519"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["EC:2.4.1.128","RHEA:20453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03594"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: GO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylglycerol, through sequential deacylation and re-acylation reactions, to generate phosphatidylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15485873","PMID:18458083","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol acyl-chain remodeling","synonyms":[{"name":"phosphatidylglycerol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036148"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: MOD:00050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-acetyl-L-alanine.","definition_xrefs":["PubMed:363452","RESID:AA0041","PubMed:4700463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-alanine","synonyms":[{"name":"(2S)-2-(acetamido)propanoic acid","type":"exact"},{"name":"2-(acetylamino)propanoic acid","type":"exact"},{"name":"2-(acetylazanyl)propanoic acid","type":"exact"},{"name":"AcAla","type":"exact"},{"name":"MOD_RES N-acetylalanine","type":"exact"},{"name":"N-acetyl-L-alanine","type":"exact"},{"name":"N-acetylated L-alanine","type":"exact"},{"name":"acetylalanine","type":"exact"}],"termid":"MOD:00050"}


id: PBO:0039539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36C","termid":"PBO:0039539"}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: PBO:0048201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha5","termid":"PBO:0048201"}


id: PATO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's marked by tedious repetition.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetitive","termid":"PATO:0000441"}


id: GO:0033372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mast cell secretory granule","termid":"GO:0033369"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"establishment of protease localization to mast cell secretory granule","synonyms":[{"name":"establishment of protease localisation in mast cell secretory granule","type":"exact"},{"name":"establishment of protease localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033372"}


id: GO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-B RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-B RNA polymerase activity (obsolete GO:0001063)","termid":"GO:0001063"}


id: RO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultaneous_with","termid":"RO:0002082"}


id: PBO:0069152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 403, pseudogene","termid":"PBO:0069152"}


id: GO:0180018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}


id: GO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"pulmonary artery morphogenesis","termid":"GO:0061156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery endothelial tube morphogenesis","termid":"GO:0061155"}


id: GO:0051795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of catagen, the regression phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of catagen","termid":"GO:0051794"},{"relation_name":"positively_regulates","term_name":"catagen","termid":"GO:0042637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of catagen","synonyms":[{"name":"activation of catagen","type":"narrow"},{"name":"positive regulation of catagen","type":"related"},{"name":"stimulation of catagen","type":"narrow"},{"name":"up regulation of catagen","type":"related"},{"name":"up-regulation of catagen","type":"related"},{"name":"upregulation of catagen","type":"related"}],"termid":"GO:0051795"}


id: PBO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_vegetative_growth","termid":"PBO:0036115"}


id: GO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form that occurs when an epithelial cell progresses from it initial formation to its mature state, contributing to the process of gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}


id: FYPO:0004623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which astral microtubule anchoring at the mitotic spindle pole body does not occur.","definition_xrefs":["PMID:15004232","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished astral microtubule anchoring at mitotic spindle pole body","synonyms":[{"name":"abolished astral microtubule anchoring at mitotic SPB","type":"exact"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"astral microtubule anchoring at mitotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0004623"}


id: FYPO:0001960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase II activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA topoisomerase II activity","synonyms":[{"name":"abnormal DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","type":"exact"}],"termid":"FYPO:0001960"}


id: GO:0006103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxoglutarate, the dianion of 2-oxoglutaric acid. It is a key constituent of the TCA cycle and a key intermediate in amino-acid metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-oxoglutarate metabolic process","synonyms":[{"name":"2-ketoglutarate metabolic process","type":"exact"},{"name":"2-ketoglutarate metabolism","type":"exact"},{"name":"2-oxoglutarate metabolism","type":"exact"},{"name":"alpha-ketoglutarate metabolic process","type":"exact"},{"name":"alpha-ketoglutarate metabolism","type":"exact"},{"name":"alpha-oxoglutarate metabolic process","type":"exact"},{"name":"alpha-oxoglutarate metabolism","type":"exact"}],"termid":"GO:0006103"}


id: PBO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 3","termid":"PBO:0000089"}


id: GO:0032414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transmembrane transport","termid":"GO:0034767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ion transmembrane transporter activity","synonyms":[{"name":"activation of ion transporter activity","type":"narrow"},{"name":"positive regulation of ion transporter activity","type":"exact"},{"name":"stimulation of ion transporter activity","type":"narrow"},{"name":"up regulation of ion transporter activity","type":"exact"},{"name":"up-regulation of ion transporter activity","type":"exact"},{"name":"upregulation of ion transporter activity","type":"exact"}],"termid":"GO:0032414"}


id: GO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"alpha-sialidase activity","termid":"GO:0016997"}


id: GO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.","definition_xrefs":["GOC:pr","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactarate metabolic process","secondary_identifiers":["GO:0046393"],"synonyms":[{"name":"D-galactarate metabolic process","type":"related"},{"name":"D-galactarate metabolism","type":"related"},{"name":"galactarate metabolism","type":"exact"},{"name":"mucic acid metabolic process","type":"exact"},{"name":"mucic acid metabolism","type":"exact"}],"termid":"GO:0019580"}


id: GO:2000525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"positively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell costimulation","synonyms":[{"name":"positive regulation of T cell co-stimulation","type":"exact"},{"name":"positive regulation of T lymphocyte costimulation","type":"exact"},{"name":"positive regulation of T-cell co-stimulation","type":"exact"},{"name":"positive regulation of T-cell costimulation","type":"exact"},{"name":"positive regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000525"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: FYPO:0004558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has an abnormal morphology, and in which actin cortical patch localization is abnormal.","definition_xrefs":["PMID:9765059","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","synonyms":[{"name":"inviable after spore germination, undivided cell, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal F-actin patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localisation","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin patch localization","type":"exact"},{"name":"inviable following spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"}],"termid":"FYPO:0004558"}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: GO:0140395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: (1'S)-averantin + [reduced NADPH--hemoprotein reductase] + O2 = (1'S,5'S)-5'-hydroxyaverantin + [oxidized NADPH--hemoprotein reductase] + H2O. Involved in aflatoxin biosynthesis.","definition_xrefs":["PMID:8368836","EC:1.14.14.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"averantin hydroxylase activity","secondary_identifiers":["RHEA:35575","MetaCyc:RXN-9482"],"termid":"GO:0140395"}


id: PBO:0056433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 6","termid":"PBO:0056433"}


id: PBO:0041148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 3","termid":"PBO:0041148"}


id: GO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 3Fe-4S iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["RESID:AA0139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via tris-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron tetrasulphide","type":"exact"}],"termid":"GO:0018287"}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["PMID:20098723","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: PBO:0065203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 38A","termid":"PBO:0065203"}


id: PBO:0069292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 548, pseudogene","termid":"PBO:0069292"}


id: PBO:0085733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in thiamine and pyridoxine biosynthesis; member of a stationary phase-induced gene family where transcriptional induction precedes the diauxic shift; induced in the absence of thiamin in a Thi2/3p-dependent manner and repressed in its presence; forms a co-regulated gene pair with SNO2; interacts with Thi11p; paralog of SNZ1 and SNZ3","termid":"PBO:0085733"}


id: GO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + UDP-galactose = 6F-alpha-D-galactosylsucrose + UDP.","definition_xrefs":["MetaCyc:2.4.1.167-RXN","EC:2.4.1.167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sucrose 6F-alpha-galactotransferase activity","secondary_identifiers":["RHEA:10088"],"synonyms":[{"name":"UDP-galactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6F-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sucrose 6fru-alpha-galactosyltransferase activity","type":"related"},{"name":"sucrose 6(F)-alpha-galactosyltransferase activity","type":"exact"},{"name":"sucrose 6F-alpha-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sucrose 6F-alpha-galactosyltransferase activity","type":"related"}],"termid":"GO:0047235"}


id: GO:0034011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteate + H2O = NH4 + pyruvate + sulfite.","definition_xrefs":["EC:4.4.1.25","RHEA:13441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"L-cysteate sulfo-lyase activity","secondary_identifiers":["KEGG_REACTION:R07634","MetaCyc:4.4.1.25-RXN"],"synonyms":[{"name":"CuyA","type":"related"},{"name":"L-cysteate bisulfite-lyase (deaminating; pyruvate-forming) activity","type":"related"},{"name":"L-cysteate sulfo-lyase (deaminating) activity","type":"related"}],"termid":"GO:0034011"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: PBO:0061837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OGFR antisense RNA 1","termid":"PBO:0061837"}


id: GO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKB receptor activity (obsolete GO:0005015)","synonyms":[{"name":"neurotrophin TRKB receptor activity","type":"exact"}],"termid":"GO:0005015"}


id: PBO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 chaperone 1","termid":"PBO:0044317"}


id: GO:0015963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine triphosphate metabolic process","termid":"GO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"diadenosine triphosphate biosynthetic process","synonyms":[{"name":"diadenosine triphosphate anabolism","type":"exact"},{"name":"diadenosine triphosphate biosynthesis","type":"exact"},{"name":"diadenosine triphosphate formation","type":"exact"},{"name":"diadenosine triphosphate synthesis","type":"exact"}],"termid":"GO:0015963"}


id: PBO:0085248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-tRNA hydrolase that releases stalled peptides from ribosomes, component of a Cdc48p-complex; involved in protein quality control; exhibits cytosolic and ER-membrane localization; contributes to ER-associated degradation (ERAD) of specific substrates at a step after their ubiquitination; translocates to mitochondria under oxidative stress and forms a complex with Cdc48p and Npl4p that is required for ubiquitin-mediated mitochondria-associated protein degradation (MAD)","termid":"PBO:0085248"}


id: PBO:0073929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 2","termid":"PBO:0073929"}


id: PBO:0077677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 8","termid":"PBO:0077677"}


id: GO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A stable complex of proteins that carry out the DNA damage recognition and incision reactions characteristic of nucleotide excision repair (NER), such as DNA damage recognition, DNA helix unwinding, and endonucleolytic cleavage at sites flanking damaged DNA; includes TFIIH subunits and additional polypeptides; may form in the absence of DNA damage.","definition_xrefs":["PMID:10681587","PMID:9852079"],"gene_count":0,"genotype_count":0,"name":"obsolete repairosome (obsolete GO:0000108)","synonyms":[{"name":"repairosome","type":"exact"}],"termid":"GO:0000108"}


id: PBO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.98","termid":"PBO:0005761"}


id: GO:0033668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host programmed cell death","termid":"GO:0052041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host apoptosis","secondary_identifiers":["GO:0039650"],"synonyms":[{"name":"down regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"down-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"downregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"inhibition by organism of host apoptotic programmed cell death","type":"exact"},{"name":"negative regulation by symbiont of host apoptosis","type":"exact"},{"name":"negative regulation by symbiont of host apoptotic process","type":"exact"},{"name":"negative regulation by virus of host apoptosis","type":"narrow"},{"name":"suppression by symbiont of host apoptotic process","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"narrow"}],"termid":"GO:0033668"}


id: GO:0106188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked the hydrolysis of a nucleoside triphosphate (obsolete GO:0106188)","secondary_identifiers":["EC:7.1.2.-"],"termid":"GO:0106188"}


id: PBO:0040059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC4-TTLL3 readthrough","termid":"PBO:0040059"}


id: GO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pigment granule to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of pigment granule localization","synonyms":[{"name":"establishment of pigment granule localisation","type":"exact"}],"termid":"GO:0051905"}


id: GO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0878937420","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putamen development","termid":"GO:0021758"}


id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: GO:0031688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2B adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"A2B adenosine receptor binding","synonyms":[{"name":"A2B adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031688"}


id: FYPO:0002923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is normal (i.e. indistinguishable from wild type). Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"normal histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"normal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002923"}


id: RO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m1 has_muscle_antagonist m2 iff m1 has_muscle_insertion s, m2 has_muscle_insection s, m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position.","direct_ancestors":[{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_antagonist","termid":"RO:0002568"}


id: FYPO:0003365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal pyridoxine import","synonyms":[{"name":"abnormal pyridoxine import across plasma membrane","type":"exact"},{"name":"abnormal pyridoxine import during mitotic cell cycle","type":"related"},{"name":"abnormal pyridoxine import during vegetative growth","type":"exact"},{"name":"abnormal pyridoxine import into cell","type":"exact"},{"name":"abnormal pyridoxine uptake","type":"exact"}],"termid":"FYPO:0003365"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: GO:0061478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet aggregation inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to platelet aggregation inhibitor","termid":"GO:0061478"}


id: PBO:0045201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B12","termid":"PBO:0045201"}


id: FYECO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pantothenate","termid":"FYECO:0000188"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: GO:0016148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, termination (obsolete GO:0016148)","synonyms":[{"name":"protein-synthesizing GTPase activity, termination","type":"exact"}],"termid":"GO:0016148"}


id: PBO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 4, pseudogene","termid":"PBO:0039636"}


id: GO:0033009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, vestigial nucleus found in some plastids that derive from a eukaryotic endosymbiont. Observed in chlorarachniophytes and cryptomonads, which acquired their plastids from a green and red alga respectively.","definition_xrefs":["PMID:16760254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"nucleomorph","secondary_identifiers":["Wikipedia:Nucleomorph"],"termid":"GO:0033009"}


id: GO:0003727
data:
  {"annotated_genes":["SJAG_05240","SJAG_00145","SJAG_04427","SJAG_00857","SJAG_04880","SJAG_01327","SJAG_03283","SJAG_04574","SJAG_00425","SJAG_01222","SJAG_03747","SJAG_03995","SJAG_05010","SJAG_02621","SJAG_03745","SJAG_01643","SJAG_03460","SJAG_03876","SJAG_03916","SJAG_03448","SJAG_00884","SJAG_04210","SJAG_04271","SJAG_01650","SJAG_03954","SJAG_01910","SJAG_02808","SJAG_02043","SJAG_01436","SJAG_04601","SJAG_02790","SJAG_03214","SJAG_02469"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84727,87387,87661,88317,88359,97087,102489,103319,106564,111336,114107],"is_not":false,"summary":null,"term":"GO:0003727"},{"annotations":[88039,93215,85621,105270,103793,93640,100376,94610,72001,85227,85583,73633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008143"},{"annotations":[91933,73634,93216,102404,108945,106001,110989,112459,94611,85622,72002,91734,103794,91262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008266"},{"annotations":[99295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008187"},{"annotations":[103375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033592"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00425":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_01222":null,"SJAG_01327":null,"SJAG_01436":null,"SJAG_01643":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02043":null,"SJAG_02469":null,"SJAG_02621":null,"SJAG_02790":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03460":null,"SJAG_03745":null,"SJAG_03747":null,"SJAG_03876":null,"SJAG_03916":null,"SJAG_03954":null,"SJAG_03995":null,"SJAG_04210":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04574":null,"SJAG_04601":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"single-stranded RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003728"],"synonyms":[{"name":"ssRNA binding","type":"exact"}],"termid":"GO:0003727","terms_by_termid":{"GO:0003727":null,"GO:0008143":null,"GO:0008187":null,"GO:0008266":null,"GO:0033592":null}}


id: PBO:0002757
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.9","termid":"PBO:0002757"}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107752],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: PBO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 3","termid":"PBO:0050093"}


id: PATO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by normal electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-ictal","termid":"PATO:0001914"}


id: GO:1902665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isobutanol stimulus.","definition_xrefs":["GOC:mengo_curators","PMID:24014527","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isobutanol","secondary_identifiers":["GO:1990337"],"synonyms":[{"name":"process resulting in tolerance to isobutanol","type":"narrow"},{"name":"response to 2-methylpropan-1-ol","type":"exact"}],"termid":"GO:1902665"}


id: PBO:0081482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 362","termid":"PBO:0081482"}


id: PBO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b reductase 1","termid":"PBO:0044318"}


id: CHEBI:47322
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE","termid":"CHEBI:47322"}


id: PATO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of count","synonyms":[{"name":"variable number","type":"related"}],"termid":"PATO:0005001"}


id: PBO:0071303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 26","termid":"PBO:0071303"}


id: PBO:0085115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles","termid":"PBO:0085115"}


id: GO:0003696
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to satellite DNA, the many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","definition_xrefs":["GOC:jl","SO:0000005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"satellite DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0003696","terms_by_termid":{"GO:0035939":null}}


id: _global:multiplicity
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"The number of sites simultaneously modified on a peptide.","definition_xrefs":["PMID:24501219","PomBase:mah","PMID:25159151"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiplicity","termid":"_global:multiplicity"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: FYPO:0003482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased punctate cytoplasmic protein localization","synonyms":[{"name":"increased protein localization to cytoplasmic puncta","type":"exact"},{"name":"increased punctate cytoplasmic protein localisation","type":"exact"},{"name":"increased punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0003482"}


id: PBO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 1","termid":"PBO:0003163"}


id: PBO:0082659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT transcriptional complex; CCR4-NOT is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening","termid":"PBO:0082659"}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: PBO:0110406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 9","termid":"PBO:0110406"}


id: GO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of steps necessary to target endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. Begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein ubiquitination necessary for correct substrate transfer, transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["PMID:14607247","GOC:mah","GOC:rb","PMID:19520858"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-dependent ERAD pathway (obsolete GO:0030433)","termid":"GO:0030433"}


id: PBO:0060090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 37","termid":"PBO:0060090"}


id: GO:0010709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules resulting in the error-free repair of a double-strand break without the exchange of adjacent sequences.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteroduplex formation","termid":"GO:0030491"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"heteroduplex formation involved in double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0010709"}


id: GO:0019744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"hopanoid metabolic process","synonyms":[{"name":"hopanoid metabolism","type":"exact"}],"termid":"GO:0019744"}


id: GO:0019673
data:
  {"annotated_genes":["SJAG_03188","SJAG_02783","SJAG_00890","SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99167,104450,112134,85343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-mannose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-mannose metabolism","type":"exact"}],"termid":"GO:0019673","terms_by_termid":{"GO:0009298":null}}


id: GO:1904505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:nc","GOC:TermGenie","PMID:22579284","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"regulation of DNA damage response, telomere maintenance","type":"exact"}],"termid":"GO:1904505"}


id: GO:1905593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optical nerve axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of optical nerve axon regeneration","termid":"GO:1905591"},{"relation_name":"positively_regulates","term_name":"optical nerve axon regeneration","termid":"GO:0101027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optical nerve axon regeneration","synonyms":[{"name":"activation of optical nerve axon regeneration","type":"narrow"},{"name":"up regulation of optical nerve axon regeneration","type":"exact"},{"name":"up-regulation of optical nerve axon regeneration","type":"exact"},{"name":"upregulation of optical nerve axon regeneration","type":"exact"}],"termid":"GO:1905593"}


id: GO:0120507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the base-exchange of a guanine residue with queuine at the wobble position of the anticodon of tRNAs. The eukaryotic tRNA-guanine transglycosylase exists as a heterodimer of a catalytic subunit (QTRT1 in humans) and an accessory subunit (QTRT2 in humans), whereas the bacterial enzyme is homodimeric.","definition_xrefs":["PMID:38181786","GOC:sjm","PMID:20354154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA-guanine transglycosylase complex","synonyms":[{"name":"TGT","type":"exact"},{"name":"queuine tRNA-ribosyltransferase complex","type":"exact"}],"termid":"GO:0120507"}


id: PBO:0017887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase kink, Knk1","termid":"PBO:0017887"}


id: GO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP1 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EP1 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP1 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP1 receptor binding","type":"exact"}],"termid":"GO:0031864"}


id: PBO:0054527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1927","termid":"PBO:0054527"}


id: PBO:0070643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 14","termid":"PBO:0070643"}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: PBO:0091190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe","termid":"PBO:0091190"}


id: PBO:0057031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 126","termid":"PBO:0057031"}


id: PATO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a bearer by virtue of the bearer's exhbiting the morphological characteristics of a gland.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glandular","termid":"PATO:0002117"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: PBO:0017822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 L associated factor 1 Laf1","termid":"PBO:0017822"}


id: FYPO:0004246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:11907273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during meiotic prophase I","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0004246"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","PMID:21705209","GO_REF:0000068","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: GO:1900297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of hexasaccharide transport","termid":"GO:1900297"}


id: GO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060398"}


id: GO:0006431
data:
  {"annotated_genes":["SJAG_01159","SJAG_16456"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91344,101260],"is_not":false,"summary":null,"term":"GO:0006431"}]},"cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. The methionyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a methionine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"methionyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006431","terms_by_termid":{"GO:0006431":null}}


id: PBO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,4-glucan synthase, meiotic Mok14","termid":"PBO:0090588"}


id: PBO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 7","termid":"PBO:0052639"}


id: GO:1905478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glutamate-ammonia ligase activity.","definition_xrefs":["PMID:10377385","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glutamate-ammonia ligase activity (obsolete GO:1905478)","synonyms":[{"name":"regulation of L-glutamate:ammonia ligase (ADP-forming)","type":"exact"},{"name":"regulation of L-glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamine synthetase activity","type":"exact"},{"name":"regulation of glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"GO:1905478"}


id: PBO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-36","termid":"PBO:0051407"}


id: PBO:0041170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 4","termid":"PBO:0041170"}


id: PBO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member A","termid":"PBO:0047241"}


id: PBO:0073018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 2","termid":"PBO:0073018"}


id: PBO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 22","termid":"PBO:0072493"}


id: PBO:0026630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maintenance_of_mitotic_sister_chromatid_cohesion","termid":"PBO:0026630"}


id: PBO:0049620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 23","termid":"PBO:0049620"}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["KEGG_REACTION:R00294","RHEA:30211","GO:0016968","MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN","GO:0016967"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: PBO:0062642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily L member 1","termid":"PBO:0062642"}


id: GO:0032158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffuse ring composed of a series of septin bars that run parallel to the long axis of the cell. This type of septin structure has been observed in a number of locations associated with polarized grown and/or deposition of new membrane, but not with cytokinesis, such as at the shmoo (mating projection) neck, at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin band","termid":"GO:0032158"}


id: PBO:0029822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029822"}


id: PBO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A9","termid":"PBO:0072748"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: PBO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_or_gene_product","termid":"PBO:0006204"}


id: PBO:0091789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP2","termid":"PBO:0091789"}


id: PBO:0057745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1587","termid":"PBO:0057745"}


id: FYPO:0005158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->6)-beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall beta-glucan level","termid":"FYPO:0001082"},{"relation_name":"is_a","term_name":"decreased cell wall galactomannan level","termid":"FYPO:0002265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell wall (1->6)-beta-D-glucan level","synonyms":[{"name":"decreased cell wall (1->6)-beta-D-glucan accumulation","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall (1->6)-beta-D-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall (1->6)-beta-D-glucan level","type":"exact"}],"termid":"FYPO:0005158"}


id: PATO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000785 muscle function value (obsolete PATO:0000785)","termid":"PATO:0000785"}


id: GO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:hla","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dynein complex","termid":"GO:0030286"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"axonemal dynein complex","synonyms":[{"name":"axonemal dynein heavy chain","type":"narrow"},{"name":"axonemal dynein intermediate chain","type":"narrow"},{"name":"axonemal dynein intermediate light chain","type":"narrow"},{"name":"axonemal dynein light chain","type":"narrow"}],"termid":"GO:0005858"}


id: PBO:0053993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1312","termid":"PBO:0053993"}


id: PBO:0045216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 1","termid":"PBO:0045216"}


id: GO:1903761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GOC:BHF","GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:18337493","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","termid":"GO:1903760"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"},{"relation_name":"is_a","term_name":"negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential","termid":"GO:1905025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"down regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"downregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903761"}


id: GO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["ISBN:0781735149","PMID:15122201","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"}


id: FYPO:0007439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of eisosome is abnormal. For example, an eisosome may protrude into the cell interior. The eisosome consists of a furrow-like plasma membrane sub-domain and associated integral transmembrane proteins, and the proteins (eisosome filaments) that form a scaffolding lattice on the cytoplasmic face.","definition_xrefs":["GO:0032126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome","termid":"FYPO:0007262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal eisosome morphology","synonyms":[{"name":"abnormal eisosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal eisosome morphology during vegetative growth","type":"exact"},{"name":"eisosome remodeling","type":"related"}],"termid":"FYPO:0007439"}


id: FYPO:0004760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which azygotic asci that contain more than four, and up to eight, spores form following conjugation, diploid growth, and subsequent azygotic sporulation. Azygotic ascus formation occurs when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of azygotic ascus with more or fewer than four spores","termid":"FYPO:0001893"},{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of azygotic ascus with more than four spores","synonyms":[{"name":"8-spored azygotic asci","type":"related"},{"name":"abnormal azygotic ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of azygotic asci with more than four spores","type":"exact"},{"name":"azygotic asci with increased number of spores","type":"exact"},{"name":"eight-spored azygotic asci","type":"related"}],"termid":"FYPO:0004760"}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: PBO:0109004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTTG1 pseudogene 1","termid":"PBO:0109004"}


id: PBO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A2, pseudogene","termid":"PBO:0046877"}


id: GO:0047265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: poly(glycerol phosphate) + UDP-D-glucose = alpha-D-glucosylpoly(glycerol phosphate) + UDP.","definition_xrefs":["EC:2.4.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"poly(glycerol-phosphate) alpha-glucosyltransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN5-RXN","RHEA:15845"],"synonyms":[{"name":"UDP glucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:poly(glycerol-phosphate) alpha-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-poly(glycerol-phosphate) alpha-glucosyltransferase activity","type":"related"}],"termid":"GO:0047265"}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: PBO:0031620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transposition","termid":"PBO:0031620"}


id: PBO:0057143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 222","termid":"PBO:0057143"}


id: GO:0016034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate.","definition_xrefs":["EC:5.2.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"maleylacetoacetate isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0106","RHEA:14817","Reactome:R-HSA-71173","GO:0018841","MetaCyc:MALEYLACETOACETATE-ISOMERASE-RXN"],"synonyms":[{"name":"4-maleylacetoacetate cis-trans-isomerase activity","type":"related"},{"name":"maleylacetoacetic isomerase activity","type":"related"},{"name":"maleylacetone cis-trans-isomerase activity","type":"related"},{"name":"maleylacetone isomerase activity","type":"related"}],"termid":"GO:0016034"}


id: PBO:0074899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 73A","termid":"PBO:0074899"}


id: PBO:0013757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-box protein 1, SCF complex ubiquitin ligase subunit","termid":"PBO:0013757"}


id: SO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2A modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2A_acetylation_site","synonyms":[{"name":"H2Aac","type":"exact"},{"name":"histone 2A acetylation site","type":"exact"}],"termid":"SO:0002142"}


id: PBO:0066556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 19","termid":"PBO:0066556"}


id: GO:0044326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the dendritic spine that connects the dendritic shaft to the head of the dendritic spine.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine neck","secondary_identifiers":["NIF_Subcellular:sao1642908940"],"synonyms":[{"name":"neck","type":"broad"},{"name":"pedicle","type":"related"},{"name":"spine neck","type":"broad"}],"termid":"GO:0044326"}


id: PBO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coiled-coil","termid":"PBO:0001144"}


id: PBO:0088748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-6 family microtubule motor protein Klp9","termid":"PBO:0088748"}


id: MOD:00051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to N-acetyl-L-aspartic acid.","definition_xrefs":["ChEBI:21547","PubMed:2395459","PubMed:1560020","RESID:AA0042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-aspartic acid","synonyms":[{"name":"(2S)-2-(acetamido)butanedioic acid","type":"exact"},{"name":"2-(acetylamino)butanedioic acid","type":"exact"},{"name":"2-(acetylazanyl)butanedioic acid","type":"exact"},{"name":"AcAsp","type":"exact"},{"name":"MOD_RES N-acetylaspartate","type":"exact"},{"name":"N-acetyl-L-aspartic acid","type":"exact"},{"name":"N-acetylated L-aspartic acid","type":"exact"},{"name":"acetylaspartic acid","type":"exact"}],"termid":"MOD:00051"}


id: PBO:0027291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutathione_peroxidase_activity","termid":"PBO:0027291"}


id: PBO:0081461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 330","termid":"PBO:0081461"}


id: SO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UGA in some contexts, whereas UGA is a termination codon in other contexts.","definition_xrefs":["PMID:23275319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine","synonyms":[{"name":"Sec","type":"exact"},{"name":"U","type":"exact"}],"termid":"SO:0001455"}


id: GO:1901810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-carotene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00802","GOC:TermGenie","MetaCyc:PWY-5943","PMID:11387982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene metabolic process","synonyms":[{"name":"beta-carotene metabolism","type":"exact"}],"termid":"GO:1901810"}


id: PBO:0039067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase","termid":"PBO:0039067"}


id: FYPO:0003676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which maturation of a precursor 5S ribosomal RNA (rRNA) molecule into a mature 5S rRNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0000481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal 5S RNA maturation","synonyms":[{"name":"abnormal 5S RNA maturation during mitotic cell cycle","type":"related"},{"name":"abnormal 5S RNA maturation during vegetative growth","type":"exact"},{"name":"abnormal 5S RNA processing","type":"exact"},{"name":"abnormal maturation of 5S rRNA","type":"exact"}],"termid":"FYPO:0003676"}


id: GO:0052723
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111106],"is_not":false,"summary":null,"term":"GO:0052723"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 1-diphospho-1D-myo-inositol (2,3,4,5,6)pentakisphosphate.","definition_xrefs":["GOC:jp","RHEA:37459","PMID:18981179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 1-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10972","KEGG_REACTION:R05799","EC:2.7.4.21"],"termid":"GO:0052723","terms_by_termid":{"GO:0052723":null}}


id: PR:Q9USY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.02","synonyms":[{"name":"Spom972h-abp2","type":"exact"}],"termid":"PR:Q9USY4"}


id: PR:O13834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ptr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.04","synonyms":[{"name":"Spom972h-ptr1","type":"exact"},{"name":"poly(A)+ RNA transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13834"}


id: PBO:0087933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; localizes to RNA processing bodies (P bodies) and to stress granules; may have a role in translation regulation under stress conditions; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2","termid":"PBO:0087933"}


id: PBO:0067899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 201","termid":"PBO:0067899"}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: PBO:0028154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_epirubicin","termid":"PBO:0028154"}


id: GO:1901935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-caryophyllene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene metabolic process","synonyms":[{"name":"beta-caryophyllene metabolism","type":"exact"}],"termid":"GO:1901935"}


id: PBO:0077051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 2","termid":"PBO:0077051"}


id: MOD:01326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-tyrosine.","definition_xrefs":["Unimod:184#Y","PubMed:12422359","PubMed:12716131","PubMed:11510821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-tyrosine","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:01326"}


id: PBO:0051289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-39","termid":"PBO:0051289"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: PBO:0073884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 2","termid":"PBO:0073884"}


id: GO:0010132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dhurrin, a cyanogenic glucoside which functions as a plant defense compound.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanogenic glycoside biosynthetic process","termid":"GO:0019756"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"dhurrin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-861"],"synonyms":[{"name":"dhurrin anabolism","type":"exact"},{"name":"dhurrin biosynthesis","type":"exact"},{"name":"dhurrin formation","type":"exact"},{"name":"dhurrin synthesis","type":"exact"}],"termid":"GO:0010132"}


id: FYPO:0007391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which an aneuploid spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah","PMID:22737087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable aneuploid spore","synonyms":[{"name":"abolished aneuploid spore germination","type":"exact"},{"name":"aneuploid spore germination abolished","type":"exact"},{"name":"decreased aneuploid spore viability","type":"exact"},{"name":"decreased viability of aneuploid cells","type":"related"},{"name":"decreased viability of aneuploid spores","type":"related"},{"name":"lethal in aneuploid spore","type":"related"}],"termid":"FYPO:0007391"}


id: FYPO:0001816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylamine-glycine ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal phosphoribosylamine-glycine ligase activity","synonyms":[{"name":"abnormal GAR synthetase activity","type":"exact"}],"termid":"FYPO:0001816"}


id: PBO:0072325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 11","termid":"PBO:0072325"}


id: PBO:0072664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 interacting protein 1","termid":"PBO:0072664"}


id: FYPO:0007904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which glucan biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal glucan synthesis","synonyms":[{"name":"abnormal glucan biosynthetic process","type":"exact"},{"name":"beta-glucan synthesis defective","type":"exact"}],"termid":"FYPO:0007904"}


id: FYPO:0008049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}


id: PR:O42699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.14","synonyms":[{"name":"Spom972h-rpl1902","type":"exact"}],"termid":"PR:O42699"}


id: PBO:0068116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 423","termid":"PBO:0068116"}


id: FYPO:0001256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to oxygen","termid":"FYPO:0001255"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hypoxia","termid":"FYPO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to hypoxia","synonyms":[{"name":"increased protein accumulation during cellular response to hypoxia","type":"related"},{"name":"increased protein level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to increased oxygen tension","type":"exact"}],"termid":"FYPO:0001256"}


id: PBO:0073892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 8","termid":"PBO:0073892"}


id: GO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: GO:0051302
data:
  {"annotated_genes":["SJAG_02592","SJAG_02807","SJAG_00883","SJAG_03581","SJAG_01787","SJAG_02392","SJAG_01863","SJAG_00514","SJAG_03692","SJAG_03631","SJAG_00229","SJAG_02514","SJAG_03592","SJAG_03508","SJAG_03704","SJAG_02380","SJAG_04943","SJAG_02169","SJAG_01114","SJAG_01188","SJAG_03353","SJAG_03048","SJAG_04412","SJAG_00845","SJAG_04666","SJAG_01790","SJAG_03681","SJAG_01386","SJAG_05290","SJAG_03342","SJAG_03309","SJAG_04776","SJAG_02838","SJAG_04551","SJAG_04468","SJAG_01805","SJAG_01837","SJAG_04597","SJAG_03887","SJAG_00082","SJAG_00256","SJAG_01456","SJAG_04455","SJAG_03936","SJAG_06270","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[98449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98224,98450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[103298,111951,95669,86851,89021,87832,91747,89561,88939,101091,103608,106237,95749,97350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[86130,90512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[109423,83693,90513,90681,106587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[86131,89906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[106830,99782,86893,91957,115307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[109424,111512,86002,88520,101233,85378,89907,103110,113910,102439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[90516,83694,88521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[115477,89913,90478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[86136,99571,112728,85948,87944,114701,111513,105277,113544,109426,83696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[84016,97462,107432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell division","termid":"GO:0051301"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01456":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_02169":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02514":null,"SJAG_02592":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03581":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03692":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03936":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04468":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_05290":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell division","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0051302","terms_by_termid":{"GO:0010974":null,"GO:0031030":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: MOD:01475
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-[S-(carboxamidomethyl)phosphopantetheine]-L-serine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-[S-(carboxamidomethyl)phosphopantetheine]-L-serine","termid":"MOD:01475"}


id: PBO:0079048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 4-1","termid":"PBO:0079048"}


id: PBO:0073487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGO1 antisense RNA 1","termid":"PBO:0073487"}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: PBO:0110871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains, RNASEK, poorly chracterized protein implicated in endocytic pathway, vacuolar pricesses, protection against virus's","termid":"PBO:0110871"}


id: RO:HOM0000068
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Xenology that is characterized by multiple horizontal transfer events, resulting in the presence of two or more copies of the foreign gene in the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_xenology_relationship_with","termid":"RO:HOM0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paraxenology_relationship_with","synonyms":[{"name":"duplicate xenology","type":"exact"},{"name":"multiple xenology","type":"exact"},{"name":"paraxenologous to","type":"exact"}],"termid":"RO:HOM0000068"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["GO:0007005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: GO:1905176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:19088079","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"activation of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905176"}


id: PBO:0073152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog D, COPII coat complex component","termid":"PBO:0073152"}


id: PBO:0086459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloendopeptidase; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0086459"}


id: SO:00000020002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant which disrupts the translation of an upstream open reading frame because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:00000000002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_frameshift_variant","synonyms":[{"name":"uFrameshift (UTRannotator)","type":"exact"}],"termid":"SO:00000020002382"}


id: PBO:0086128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086128"}


id: PBO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 1","termid":"PBO:0044161"}


id: PBO:0085392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Mg(2+) transporter; expression and turnover are regulated by Mg(2+) concentration; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; magnesium transport defect of the null mutant is functionally complemented by either of the human genes MAGT1 and TUSC3 that are not orthologous to ALR1","termid":"PBO:0085392"}


id: GO:0046757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A form of viral release in which the nucleocapsid evaginates from the host endoplasmic reticulum membrane system, resulting in envelopment of the virus and cell lysis.","definition_xrefs":["ISBN:0072370319"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic virus budding from ER membrane (obsolete GO:0046757)","synonyms":[{"name":"lytic ER membrane viral budding","type":"exact"},{"name":"lytic endoplasmic reticulum membrane viral budding","type":"exact"},{"name":"lytic viral budding from ER membrane","type":"exact"},{"name":"lytic virus budding from ER membrane","type":"exact"}],"termid":"GO:0046757"}


id: PR:P87169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02796","PRO:DNx","PANTHER:PTHR23168:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component mad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.04c","secondary_identifiers":["UniProtKB:P87169"],"synonyms":[{"name":"SPBC3D6.04c","type":"related"},{"name":"Spom972h-MAD1L1","type":"exact"},{"name":"mitotic arrest deficient protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87169"}


id: PBO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6B","termid":"PBO:0060290"}


id: GO:0014834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the number of skeletal muscle satellite cells in a skeletal muscle is maintained during muscle regeneration. There are at least three mechanisms by which this is achieved. Skeletal muscle satellite stem cell asymmetric division ensures satellite stem cell numbers are kept constant. Symmetric division of these cells amplifies the number of skeletal muscle satellite stem cells. Some adult skeletal muscle myoblasts (descendants of activated satellite cells) can develop back into quiescent satellite cells, replenishing the overall pool of satellite cells.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","GOC:dph","PMID:23303905","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell number","termid":"GO:0098727"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration","synonyms":[{"name":"satellite cell compartment self-renewal involved in skeletal muscle regeneration","type":"exact"},{"name":"satellite cell population maintenance","type":"exact"},{"name":"satellite cell self-renewal","type":"broad"}],"termid":"GO:0014834"}


id: PBO:0077680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 11","termid":"PBO:0077680"}


id: PBO:0058546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6125","termid":"PBO:0058546"}


id: GO:1904637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["PMID:17516843","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to ionomycin","termid":"GO:1904636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ionomycin","termid":"GO:1904637"}


id: PBO:0052247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 16","termid":"PBO:0052247"}


id: FYPO:0004066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more protein-coding genes is increased.","definition_xrefs":["PMID:19328067","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at protein coding gene","synonyms":[{"name":"increased protein localisation to chromatin at protein coding gene","type":"exact"},{"name":"increased protein localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004066"}


id: GO:0009517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex associated with photosystem II.","definition_xrefs":["GOC:lr","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid light-harvesting complex","termid":"GO:0009503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II","synonyms":[{"name":"LHCII","type":"exact"}],"termid":"GO:0009517"}


id: PBO:0027158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_alanine_level","termid":"PBO:0027158"}


id: PBO:0084392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs; also enters the nucleus and positively regulates transcription initiation; unlike most Sm-like proteins, Lsm1p requires both its SM-domain and C-terminal domain for RNA-binding; binds to mRNAs under glucose starvation, most often in the 3' UTR; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084392"}


id: GO:0098813
data:
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211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[98520,112958,94005,97410,85283,105959,110155,91667,85882,106380,96596,103571,89914,101534,91413,103892,104950,87101,106421,109291,94722,111974,105212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The 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Nuclear chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":147,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00145":null,"SJAG_00146":null,"SJAG_00207":null,"SJAG_00229":null,"SJAG_00244":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00460":null,"SJAG_00600":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00796":null,"SJAG_00871":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01067":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01515":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01679":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_01928":null,"SJAG_01956":null,"SJAG_02045":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02246":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02513":null,"SJAG_02542":null,"SJAG_02606":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03092":null,"SJAG_03116":null,"SJAG_03126":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03567":null,"SJAG_03575":null,"SJAG_03619":null,"SJAG_03680":null,"SJAG_03681":null,"SJAG_03682":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03832":null,"SJAG_03835":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03989":null,"SJAG_04003":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04143":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04457":null,"SJAG_04508":null,"SJAG_04573":null,"SJAG_04581":null,"SJAG_04597":null,"SJAG_04623":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04950":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05019":null,"SJAG_05032":null,"SJAG_05193":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05236":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_05321":null,"SJAG_05329":null,"SJAG_07002":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"nuclear chromosome segregation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098813","terms_by_termid":{"GO:0000022":null,"GO:0000070":null,"GO:0000073":null,"GO:0007076":null,"GO:0007079":null,"GO:0007091":null,"GO:0007094":null,"GO:0007129":null,"GO:0030999":null,"GO:0031134":null,"GO:0031619":null,"GO:0032121":null,"GO:0033047":null,"GO:0033316":null,"GO:0044821":null,"GO:0045132":null,"GO:0045141":null,"GO:0045143":null,"GO:0045144":null,"GO:0045841":null,"GO:0045842":null,"GO:0051232":null,"GO:0051256":null,"GO:0051305":null,"GO:0051306":null,"GO:0051307":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0051755":null,"GO:0061804":null,"GO:0061805":null,"GO:0062123":null,"GO:0070197":null,"GO:0090006":null,"GO:0090266":null,"GO:0090267":null,"GO:0090306":null,"GO:0090307":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:0140499":null,"GO:0140641":null,"GO:0140642":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902846":null,"GO:1904967":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990571":null,"GO:1990758":null,"GO:1990810":null,"GO:1990813":null,"GO:1990893":null,"GO:1990942":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: PBO:0005181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a","termid":"PBO:0005181"}


id: PBO:0091166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor, LYR family Sdh6","termid":"PBO:0091166"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: PBO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin 1","termid":"PBO:0061582"}


id: GO:0016661
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004846"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.7.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors","type":"narrow"}],"termid":"GO:0016661","terms_by_termid":{"GO:0004846":null}}


id: PBO:0054146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1513","termid":"PBO:0054146"}


id: FYPO:0000950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"elongated aseptate vegetative cell","synonyms":[{"name":"elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated aseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0000950"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: PBO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (predicted)","termid":"PBO:0003118"}


id: PBO:0061150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 2","termid":"PBO:0061150"}


id: PBO:0055699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLGL scribble cell polarity complex component 2","termid":"PBO:0055699"}


id: PBO:0045658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 2","termid":"PBO:0045658"}


id: PBO:0058605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6737","termid":"PBO:0058605"}


id: PBO:0065771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI interacting lncRNA","termid":"PBO:0065771"}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: PBO:0082238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase II (2-isopropylmalate synthase); catalyzes the first step in the leucine biosynthesis pathway; the minor isozyme, responsible for the residual alpha-IPMS activity detected in a leu4 null mutant; LEU9 has a paralog, LEU4, that arose from the whole genome duplication","termid":"PBO:0082238"}


id: PBO:0058489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5683","termid":"PBO:0058489"}


id: PBO:0076609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 27, pseudogene","termid":"PBO:0076609"}


id: PBO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_formation","termid":"PBO:0031236"}


id: PR:P56286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01324","PRO:DNx","PANTHER:PTHR10602:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.09c","secondary_identifiers":["UniProtKB:P56286"],"synonyms":[{"name":"Spom972h-EIF2S1","type":"exact"},{"name":"eIF-2-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56286"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: PBO:0027017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomeric_repeat_sequence","termid":"PBO:0027017"}


id: PBO:0041821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARNMT1 antisense RNA 1","termid":"PBO:0041821"}


id: GO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of BMP signaling pathway","secondary_identifiers":["GO:0090097"],"synonyms":[{"name":"regulation of BMP receptor signaling pathway","type":"related"},{"name":"regulation of BMP signalling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030510"}


id: PBO:0044607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 1","termid":"PBO:0044607"}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113239],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: PBO:0059620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 1","termid":"PBO:0059620"}


id: PBO:0043406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 3","termid":"PBO:0043406"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","GOC:krc","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: PBO:0089437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transferrin receptor-like protease Tre1","termid":"PBO:0089437"}


id: GO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"positively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral tolerance induction","synonyms":[{"name":"activation of peripheral tolerance induction","type":"narrow"},{"name":"stimulation of peripheral tolerance induction","type":"narrow"},{"name":"up regulation of peripheral tolerance induction","type":"exact"},{"name":"up-regulation of peripheral tolerance induction","type":"exact"},{"name":"upregulation of peripheral tolerance induction","type":"exact"}],"termid":"GO:0002660"}


id: PBO:0089338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase subunit Gem1","termid":"PBO:0089338"}


id: PR:O13692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.13c","synonyms":[{"name":"Spom972h-gas5","type":"exact"}],"termid":"PR:O13692"}


id: MOD:01436
data:
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id: GO:0035943
data:
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id: PBO:0064076
data:
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id: PBO:0015250
data:
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id: GO:0052767
data:
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id: GO:0031560
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id: PBO:0002079
data:
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id: PBO:0062743
data:
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id: GO:0000280
data:
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id: PBO:0076811
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEN1 subunit of CST complex","termid":"PBO:0076811"}


id: PBO:0084461
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase of the cis-Golgi apparatus; initiates the polymannose outer chain elongation of N-linked oligosaccharides of glycoproteins","termid":"PBO:0084461"}


id: PBO:0050577
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 2","termid":"PBO:0050577"}


id: PBO:0041520
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 divergent transcript","termid":"PBO:0041520"}


id: PBO:0082868
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core subunit of the RENT complex; involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure; NET1 has a paralog, TOF2, that arose from the whole genome duplication","termid":"PBO:0082868"}


id: FYPO:0008075
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id: PBO:0087722
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in maintaining the integrity of the complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay","termid":"PBO:0087722"}


id: PBO:0065227
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR7 antisense RNA 1","termid":"PBO:0065227"}


id: PBO:0079216
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 1","termid":"PBO:0079216"}


id: GO:0004742
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id: PBO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.100","termid":"PBO:0001920"}


id: PBO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 6, pseudogene","termid":"PBO:0060507"}


id: PBO:0044402
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 64, pseudogene","termid":"PBO:0044402"}


id: PBO:0059946
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 32","termid":"PBO:0059946"}


id: GO:0001173
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["PMID:18846104","PMID:16826228","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcriptional start site selection","secondary_identifiers":["GO:0001176"],"synonyms":[{"name":"DNA-dependent transcriptional start site selection","type":"exact"},{"name":"transcriptional start site selection at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001173"}


id: PBO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35","termid":"PBO:0071534"}


id: GO:1905863
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: PBO:0041255
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 198","termid":"PBO:0041255"}


id: PBO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 7","termid":"PBO:0060649"}


id: GO:0003399
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id: GO:0033615
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  {"annotated_genes":["SJAG_01838","SJAG_06135","SJAG_04899","SJAG_01503","SJAG_07008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85187,92948,96760,105792,112703],"is_not":false,"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the mitochondrial inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"},{"relation_name":"part_of","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033615","terms_by_termid":{"GO:0033615":null}}


id: GO:1990402
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id: PBO:0091500
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Per1","termid":"PBO:0091500"}


id: GO:1990529
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  {"annotated_genes":["SJAG_03801","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99120,112185],"is_not":false,"summary":null,"term":"GO:1990529"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the four mannoses in the GPI-anchor precursor. In yeast S. cerevisiae this complex consists of Pbn1p and Gpi14p and in rat this complex consists of PIG-X and PIG-M.","definition_xrefs":["GOC:rb","GOC:dph","PMID:15635094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03115":null,"SJAG_03801":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase I complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:1990529","terms_by_termid":{"GO:1990529":null}}


id: PBO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 56 pseudogene","termid":"PBO:0070142"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: PR:Q9C0U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB1C11.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0U9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter PB1C11.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB1C11.03","synonyms":[{"name":"Spom972h-SPCPB1C11.03","type":"exact"}],"termid":"PR:Q9C0U9"}


id: PBO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0000992"}


id: PBO:0046487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expanded repeat domain, CAG/CTG 1","termid":"PBO:0046487"}


id: GO:0005172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor binding","synonyms":[{"name":"VEGF receptor binding","type":"exact"},{"name":"VEGFR binding","type":"exact"},{"name":"vascular endothelial growth factor","type":"narrow"},{"name":"vascular endothelial growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005172"}


id: MOD:01076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:00414. Remap to MOD:00414.","definition_xrefs":["DeltaMass:215"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01076 N-methyl arginyl (obsolete MOD:01076)","termid":"MOD:01076"}


id: PATO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's having the ability to go through numerous cycles of cell division while maintaining the undifferentiated state.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proliferative","termid":"PATO:0002102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self-renewal","termid":"PATO:0001398"}


id: PBO:0090063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11","termid":"PBO:0090063"}


id: GO:0009152
data:
  {"annotated_genes":["SJAG_02741","SJAG_03064","SJAG_01859","SJAG_MIT09","SJAG_05204","SJAG_03355","SJAG_02364","SJAG_00982","SJAG_04288","SJAG_04007","SJAG_02564","SJAG_01139","SJAG_03290","SJAG_01070","SJAG_01402","SJAG_MIT15","SJAG_03731","SJAG_04122","SJAG_02850","SJAG_04681","SJAG_00044","SJAG_04123","SJAG_03925","SJAG_01814","SJAG_02105","SJAG_07003","SJAG_01471","SJAG_04422","SJAG_03114","SJAG_04634","SJAG_00915","SJAG_MIT37","SJAG_00866","SJAG_00438","SJAG_00542","SJAG_05277","SJAG_04627","SJAG_04849","SJAG_03313","SJAG_03140","SJAG_00836","SJAG_01081","SJAG_02158","SJAG_00427","SJAG_00133","SJAG_02038","SJAG_06634","SJAG_00964","SJAG_01298","SJAG_00985","SJAG_02887","SJAG_02006","SJAG_01661","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106426],"is_not":false,"summary":null,"term":"GO:0009152"},{"annotations":[99501,85024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106313,106424,99502,110557,95651,114983,113381,93904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[89349,94475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[83585,91105,104656,95116,114468,110293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[94227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[89637,112883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[88324,113088,85513,106667,110889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[104335,59003,97267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[96149,98317,104336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[114984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89859,97891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[103538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[66432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[101060,104851,115062,115066,90942,99763,99734,89971,85269,103878,99116,88948,115057,97894,89373,111892,103968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114017],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[89861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic 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ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleotide anabolism","type":"exact"},{"name":"purine ribonucleotide biosynthesis","type":"exact"},{"name":"purine ribonucleotide formation","type":"exact"},{"name":"purine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009152","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0009152":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: GO:0001407
data:
  {"annotated_genes":["SJAG_05325","SJAG_00232","SJAG_03644"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98667,98668,98669],"is_not":false,"summary":null,"term":"GO:0001407"}]},"cv_name":"biological_process","definition":"The process in which a glycerophosphodiester is transported across a membrane. Glycerophosphodiesters are small molecules composed of glycerol-3-phosphate and an alcohol, for example, glycerophosphoinositol.","definition_xrefs":["GOC:mcc","PMID:12912892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_03644":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glycerophosphodiester transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001407","terms_by_termid":{"GO:0001407":null}}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: PBO:0059475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin","termid":"PBO:0059475"}


id: GO:0102319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxystreptamine(2+) + UDP-N-acetyl-alpha-D-glucosamine = H+ + 2'-N-acetylparomamine(2+) + UDP(3-).","definition_xrefs":["GOC:pz","EC:2.4.1.283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"2-deoxystreptamine N-acetyl-D-glucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13122","RHEA:33947"],"termid":"GO:0102319"}


id: GO:0006144
data:
  {"annotated_genes":["SJAG_06634","SJAG_04299","SJAG_04297","SJAG_01859","SJAG_01661","SJAG_01081","SJAG_03140","SJAG_01814","SJAG_05287","SJAG_04300","SJAG_01070","SJAG_02364","SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112421,112884],"is_not":false,"summary":null,"term":"GO:0006144"},{"annotations":[106425,106314,113382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[93905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[89636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[111078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[106315,93906,110558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[87877,110124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[113386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine base metabolic process","type":"exact"},{"name":"purine base metabolism","type":"exact"},{"name":"purine metabolic process","type":"narrow"},{"name":"purine metabolism","type":"narrow"}],"termid":"GO:0006144","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0009113":null,"GO:0009115":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: PBO:0061019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2","termid":"PBO:0061019"}


id: PBO:0049026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 6","termid":"PBO:0049026"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_02827","SJAG_01647","SJAG_03992","SJAG_02489","SJAG_00196"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94589,106895,110835],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[93239,99273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0015036","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["UM-BBD_reactionID:r1293","EC:1.8.3.2","MetaCyc:THIOL-OXIDASE-RXN"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: PBO:0031752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_double-strand_break_sites_during_vegetative_growth","termid":"PBO:0031752"}


id: PBO:0085163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; NPP1 has a paralog, NPP2, that arose from the whole genome duplication, and an npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085163"}


id: PBO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family (predicted)","termid":"PBO:0001885"}


id: PBO:0027121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis","termid":"PBO:0027121"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: PBO:0079023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 6-1","termid":"PBO:0079023"}


id: PBO:0067038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 52, pseudogene","termid":"PBO:0067038"}


id: PBO:0085160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad16p) during NER; required for repair of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0085160"}


id: GO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH reduction","synonyms":[{"name":"acidification","type":"exact"}],"termid":"GO:0045851"}


id: RO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depends_on","termid":"RO:0002502"}


id: GO:2000533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"negatively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal albumin absorption","termid":"GO:2000533"}


id: PBO:0039597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANP32A intronic transcript 1","termid":"PBO:0039597"}


id: PBO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 1 homolog","termid":"PBO:0070429"}


id: GO:1903869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GOC:rph","PMID:24769206","GOC:TermGenie","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:1903868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","synonyms":[{"name":"down regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"down regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"down regulation of MetF","type":"related"},{"name":"down regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"down regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"down-regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"down-regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of MetF","type":"related"},{"name":"down-regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down-regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"downregulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"downregulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"downregulation of MetF","type":"related"},{"name":"downregulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"downregulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"downregulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"inhibition of 5,10-CH(2)-H(4)folate reductase activity","type":"narrow"},{"name":"inhibition of 5,10-CH2-H4folate reductase activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of MetF","type":"related"},{"name":"inhibition of N5,10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"inhibition of N5,N10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"inhibition of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase (NADPH2)","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"negative regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"negative regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of MetF","type":"related"},{"name":"negative regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"negative regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"negative regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"}],"termid":"GO:1903869"}


id: PBO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SnoaL","termid":"PBO:0000134"}


id: PBO:0094074
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_phenotype_score","termid":"PBO:0094074"}


id: PBO:0050036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 4","termid":"PBO:0050036"}


id: GO:0010652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"positively_regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by chemical coupling","termid":"GO:0010652"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: PBO:0084279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the endoplasmic reticulum; required for normal content of cell wall beta-1,6-glucan","termid":"PBO:0084279"}


id: PBO:0074764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1B","termid":"PBO:0074764"}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: PBO:0029535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_spheroid_vegetative_cell","termid":"PBO:0029535"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PBO:0059811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 37","termid":"PBO:0059811"}


id: PBO:0030994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_osmotic_stress","termid":"PBO:0030994"}


id: PBO:0039260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 7 family member A1 pseudogene 2","termid":"PBO:0039260"}


id: FYPO:0004861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactomannan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal galactomannan level","termid":"FYPO:0001079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell wall galactomannan level","synonyms":[{"name":"normal cell wall galactomannan accumulation","type":"related"},{"name":"normal cell wall galactomannan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall galactomannan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004861"}


id: PBO:0085343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; contains lipase specific GXSXG motif; maintains lipid droplet (LD) morphology; induced by transcription factor Rpn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085343"}


id: GO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.","definition_xrefs":["PMID:8974333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GABA-A receptor activity","synonyms":[{"name":"ionotropic GABA receptor activity","type":"exact"}],"termid":"GO:0004890"}


id: PR:O14080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4,15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.15","synonyms":[{"name":"Spom972h-SPACUNK4.15","type":"exact"}],"termid":"PR:O14080"}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: PBO:0039795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 2","termid":"PBO:0039795"}


id: PBO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Pdr13 (predicted)","termid":"PBO:0001016"}


id: GO:0099085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one => 1-[(3-chloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one + Cl-.","definition_xrefs":["PMID:22035794","PMID:1521542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"DIF dechlorinase activity","synonyms":[{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor 1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor dechlorinase activity","type":"exact"}],"termid":"GO:0099085"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0035831
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035831"}


id: PBO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HXK1","termid":"PBO:0000392"}


id: PBO:0067251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 325, pseudogene","termid":"PBO:0067251"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["UniProtKB:O14227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: PBO:0091007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, stationary phase-specific Phx1","termid":"PBO:0091007"}


id: PBO:0002926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Paa1","termid":"PBO:0002926"}


id: GO:0060799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the commitment of an unspecified fate to adopt an endoderm fate.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in endodermal cell fate specification (obsolete GO:0060799)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in endodermal cell fate specification","type":"exact"}],"termid":"GO:0060799"}


id: GO:1990317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in septin ring formation during mitosis. In Saccharomyces cerevisiae it consists of BNI5, CDC3, CDC10, CDC11, CDC12, GIN4, NAP1 and SHS1. At least 2 GIN4 molecules are involved.","definition_xrefs":["PMID:12058072","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cellular bud neck septin ring","termid":"GO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"Gin4 complex","synonyms":[{"name":"Gin4-septin complex","type":"exact"}],"termid":"GO:1990317"}


id: PR:Q9UT87
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- img1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein subunit img1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.02","synonyms":[{"name":"Spom972h-img1","type":"exact"}],"termid":"PR:Q9UT87"}


id: GO:0035511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:12594517","PMID:16482161","PMID:18775698"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative DNA demethylation (obsolete GO:0035511)","termid":"GO:0035511"}


id: PBO:0056264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing 4","termid":"PBO:0056264"}


id: PBO:0070449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 6","termid":"PBO:0070449"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: PBO:0060545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 5","termid":"PBO:0060545"}


id: GO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methoxy-2,4-dioxobutanoate + H2O = H+ + methanol + oxaloacetate.","definition_xrefs":["EC:3.1.1.44","RHEA:10564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"4-methyloxaloacetate esterase activity","secondary_identifiers":["KEGG_REACTION:R01144","MetaCyc:4-METHYLOXALOACETATE-ESTERASE-RXN"],"synonyms":[{"name":"oxaloacetate-4-methyl-ester oxaloacetohydrolase activity","type":"related"}],"termid":"GO:0047583"}


id: GO:0016073
data:
  {"annotated_genes":["SJAG_01176","SJAG_01191","SJAG_03572","SJAG_00559","SJAG_00854","SJAG_04084","SJAG_02156","SJAG_00088","SJAG_00083","SJAG_03984","SJAG_04153","SJAG_01521","SJAG_03179","SJAG_03745","SJAG_00566","SJAG_04754","SJAG_04321","SJAG_00081","SJAG_02993","SJAG_01958","SJAG_04527","SJAG_01798","SJAG_03257","SJAG_04586","SJAG_01234","SJAG_04286","SJAG_04824","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88351,109325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071037"},{"annotations":[91291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[99907,111490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034472"},{"annotations":[104102,86761,112104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016180"},{"annotations":[110349,97239,86145,91457,102286,102345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[100475,114310,101319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034473"},{"annotations":[98252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034474"},{"annotations":[98253,98165,93357,84537,101320,89175,102528,114311,72451,100476,92025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034475"},{"annotations":[114312,101321,86111,95028,100477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034476"},{"annotations":[89829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034477"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snRNA, small nuclear RNA, any of various low-molecular-mass RNA molecules found in the eukaryotic nucleus as components of the small nuclear ribonucleoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00083":null,"SJAG_00088":null,"SJAG_00559":null,"SJAG_00566":null,"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01234":null,"SJAG_01521":null,"SJAG_01798":null,"SJAG_01958":null,"SJAG_02156":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03257":null,"SJAG_03572":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04286":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04586":null,"SJAG_04754":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"snRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"snRNA metabolism","type":"exact"}],"termid":"GO:0016073","terms_by_termid":{"GO:0016180":null,"GO:0031120":null,"GO:0034472":null,"GO:0034473":null,"GO:0034474":null,"GO:0034475":null,"GO:0034476":null,"GO:0034477":null,"GO:0071037":null,"GO:0120049":null}}


id: GO:0033122
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71993,75029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide catabolic process","termid":"GO:0030812"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of purine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"negative regulation of purine nucleotide breakdown","type":"exact"},{"name":"negative regulation of purine nucleotide catabolism","type":"exact"},{"name":"negative regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033122","terms_by_termid":{"GO:0045820":null}}


id: MOD:01516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 144.099-144.106 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"}


id: PBO:0089795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 conserved fungal multispanning membrane protein","termid":"PBO:0089795"}


id: PBO:0055606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3044","termid":"PBO:0055606"}


id: GO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane potential","termid":"GO:0086036"}


id: GO:1990546
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108324,87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transport","termid":"GO:0035674"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990546","terms_by_termid":{"GO:0006843":null}}


id: PATO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits temperature variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of temperature","termid":"PATO:0001304"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: GO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"},{"relation_name":"part_of","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation cycle process","synonyms":[{"name":"estrous cycle process","type":"related"},{"name":"menstrual cycle process","type":"related"}],"termid":"GO:0022602"}


id: PBO:0069523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 792, pseudogene","termid":"PBO:0069523"}


id: FYPO:0006393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a structure or substance in a cell during a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"localization phenotype during meiotic cell cycle","synonyms":[{"name":"fission yeast localization phenotype during meiotic cell cycle","type":"exact"},{"name":"localisation phenotype during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006393"}


id: PBO:0053528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 525","termid":"PBO:0053528"}


id: GO:0090222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from the centrosome.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0065003","GO:0000226"],"is_obsolete":false,"name":"centrosome-templated microtubule nucleation","termid":"GO:0090222"}


id: PATO:0000778
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000778 short term memory value (obsolete PATO:0000778)","termid":"PATO:0000778"}


id: RO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exacerbates_condition","termid":"RO:0003309"}


id: PBO:0089867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3","termid":"PBO:0089867"}


id: PBO:0043704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 1","termid":"PBO:0043704"}


id: GO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of amides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"regulation of amide catabolic process","termid":"GO:0034251"},{"relation_name":"positively_regulates","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amide catabolic process","synonyms":[{"name":"positive regulation of amide breakdown","type":"exact"},{"name":"positive regulation of amide catabolism","type":"exact"},{"name":"positive regulation of amide degradation","type":"related"},{"name":"positive regulation of cellular amide catabolic process","type":"exact"}],"termid":"GO:0034253"}


id: PBO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase pseudogene 1","termid":"PBO:0048678"}


id: GO:1901849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate.","definition_xrefs":["UniPathway:UPA00830","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"nicotinate metabolic process","termid":"GO:1901847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"nicotinate biosynthetic process","synonyms":[{"name":"nicotinate anabolism","type":"exact"},{"name":"nicotinate biosynthesis","type":"exact"},{"name":"nicotinate formation","type":"exact"},{"name":"nicotinate synthesis","type":"exact"}],"termid":"GO:1901849"}


id: GO:0010187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of seed germination.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"negatively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of seed germination","synonyms":[{"name":"down regulation of seed germination","type":"exact"},{"name":"down-regulation of seed germination","type":"exact"},{"name":"downregulation of seed germination","type":"exact"},{"name":"inhibition of seed germination","type":"narrow"}],"termid":"GO:0010187"}


id: PBO:0056749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 5, N6-adenosine","termid":"PBO:0056749"}


id: PBO:0082644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase II general transcription factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; relocalizes to the cytosol in response to hypoxia; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair","termid":"PBO:0082644"}


id: GO:0010822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitochondrion organization (obsolete GO:0010822)","synonyms":[{"name":"positive regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010822"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: PBO:0085700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in ribosome biogenesis; forms a nucleolar complex with Mak21p that binds to 90S and 66S pre-ribosomes; forms a nuclear complex with Noc3p that binds to 66S pre-ribosomes; both complexes mediate intranuclear transport of ribosomal precursors; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit","termid":"PBO:0085700"}


id: GO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricoumaroyl spermidine + NADPH + O2 = dicoumaroyl monocaffeoyl spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tricoumaroylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11260"],"synonyms":[{"name":"tricoumaroyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072547"}


id: PBO:0086998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase subunit of the telomerase holoenzyme; essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia","termid":"PBO:0086998"}


id: GO:0050308
data:
  {"annotated_genes":["SJAG_00182","SJAG_00039","SJAG_01862","SJAG_00129","SJAG_01531","SJAG_05314","SJAG_01646","SJAG_01427","SJAG_02713","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96021,85119,75031,85827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004331"},{"annotations":[73388,97138,87956,89444,93247,92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004805"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sugar phosphate + H2O = sugar + phosphate.","definition_xrefs":["MetaCyc:SUGAR-PHOSPHATASE-RXN","EC:3.1.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate phosphatase activity","termid":"GO:0019203"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00129":null,"SJAG_00182":null,"SJAG_00685":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"sugar-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00804"],"synonyms":[{"name":"sugar-phosphate phosphatase activity","type":"exact"},{"name":"sugar-phosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0050308","terms_by_termid":{"GO:0004331":null,"GO:0004805":null}}


id: PBO:0068203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 510","termid":"PBO:0068203"}


id: GO:1990103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing DNA-bound DnaA attached to HU. HU is a dimer encoded by two closely related genes. Essential for the initiation of replication in bacteria; stimulates the DnaA-dependent unwinding of oriC.","definition_xrefs":["PMID:18179598","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaA-HU complex","synonyms":[{"name":"DnaA-HU-DNA complex","type":"exact"}],"termid":"GO:1990103"}


id: PBO:0005439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor A subunit Ssb3","termid":"PBO:0005439"}


id: PBO:0063487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 4","termid":"PBO:0063487"}


id: GO:0031131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which one cell or group of cells receives, transduces, and responds to a signal generated by another cell or group of cells of different ancestry and developmental potential, such that the recipient cell(s) undergo a developmental change.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete reception of an inductive signal (obsolete GO:0031131)","termid":"GO:0031131"}


id: PBO:0027434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0027434"}


id: PBO:0088541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23","termid":"PBO:0088541"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: MOD:01872
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cyclizes an S-carboxymethyl-L-cysteine residue to (R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid with the loss of water.","definition_xrefs":["Unimod:26","PubMed:12643538"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxymethyl-L-cysteine","termid":"MOD:01061"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"(R)-5-oxo-1,4-tetrahydrothiazine-3-carboxylic acid","termid":"MOD:00419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized N-terminal S-carboxymethyl-L-cysteine","synonyms":[{"name":"(R)-5-oxoperhydro-1,4-thiazine-3-carboxylic acid","type":"exact"},{"name":"5-oxothiomorpholine-3-carboxylic acid","type":"exact"},{"name":"Otc","type":"exact"},{"name":"Pyro-carbamidomethyl","type":"related"},{"name":"S-carbamoylmethylcysteine cyclization (N-terminus)","type":"related"}],"termid":"MOD:01872"}


id: PBO:0078923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-2","termid":"PBO:0078923"}


id: GO:0009261
data:
  {"annotated_genes":["SJAG_03903","SJAG_00027","SJAG_02135","SJAG_02247","SJAG_00633","SJAG_03828","SJAG_06622","SJAG_00839","SJAG_03676","SJAG_02107","SJAG_02796","SJAG_00685","SJAG_02945","SJAG_04048","SJAG_02481","SJAG_00461","SJAG_06621","SJAG_02369","SJAG_03373","SJAG_01310","SJAG_04334","SJAG_03852","SJAG_04495","SJAG_03660","SJAG_00605","SJAG_05314","SJAG_04870","SJAG_02009","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[112431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[104993,104990,101510,105457,105459,105461,100533,101877,104996,105463,104991,112401,105462,104992,90625,101512,101511,99465,101876,104995,94365,104994,91115,105458,94094,99723,105460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94283,107634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[71993,75029],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[110022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleotide breakdown","type":"exact"},{"name":"ribonucleotide catabolism","type":"exact"},{"name":"ribonucleotide degradation","type":"exact"}],"termid":"GO:0009261","terms_by_termid":{"GO:0006096":null,"GO:0006198":null,"GO:0006256":null,"GO:0015938":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901911":null}}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["PMID:18688280","PMID:24706930","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: PBO:0028274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_vesicles_present_in_increased_numbers","termid":"PBO:0028274"}


id: GO:0035307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein dephosphorylation","termid":"GO:0035304"},{"relation_name":"is_a","term_name":"positive regulation of dephosphorylation","termid":"GO:0035306"},{"relation_name":"positively_regulates","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein dephosphorylation","synonyms":[{"name":"activation of protein amino acid dephosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"stimulation of protein amino acid dephosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"upregulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035307"}


id: GO:0097605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nuclear envelope permeability (obsolete GO:0097605)","synonyms":[{"name":"regulation of nuclear membrane permeability","type":"related"}],"termid":"GO:0097605"}


id: PBO:0049677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHA pseudogene 1","termid":"PBO:0049677"}


id: GO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation","termid":"GO:0030182"}


id: PBO:0012018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricil/uridine permese transmembrane transporter family (predicted)","termid":"PBO:0012018"}


id: PBO:0072872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 2","termid":"PBO:0072872"}


id: GO:1903754
data:
  {"annotated_genes":["SJAG_00113","SJAG_00851","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91301,93667,99821],"is_not":false,"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"The plus-end of a cortical microtubule.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule plus-end","termid":"GO:1904511"},{"relation_name":"part_of","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"cortical microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cortical microtubule plus end","type":"exact"}],"termid":"GO:1903754","terms_by_termid":{"GO:1903754":null}}


id: GO:1902673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GO_REF:0000064","PMID:5961344","GOC:giardia","PMID:16607022","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left posteriolateral flagellum","termid":"GO:0097556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left posteriolateral basal body","synonyms":[{"name":"cilial basal body of left posteriolateral cilium","type":"exact"},{"name":"cilial basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of left posterolateral cilium","type":"exact"},{"name":"cilial basal body of left posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of left posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posterolateral cilium","type":"exact"},{"name":"ciliary basal body of left posterolateral flagellum","type":"exact"},{"name":"cilium basal body of left posteriolateral cilium","type":"exact"},{"name":"cilium basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of left posterolateral cilium","type":"exact"},{"name":"cilium basal body of left posterolateral flagellum","type":"exact"},{"name":"left posteriolateral flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of left posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of left posterolateral cilium","type":"exact"},{"name":"microtubule basal body of left posterolateral flagellum","type":"exact"}],"termid":"GO:1902673"}


id: PBO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND5B antisense RNA 1","termid":"PBO:0044878"}


id: PBO:0051437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-21","termid":"PBO:0051437"}


id: PBO:0058045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4266","termid":"PBO:0058045"}


id: GO:1900436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to starvation","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"}],"termid":"GO:1900436"}


id: PBO:0059718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 26","termid":"PBO:0059718"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: GO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing immature T cells which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive T cell selection","synonyms":[{"name":"positive T lymphocyte selection","type":"exact"},{"name":"positive T-cell selection","type":"exact"},{"name":"positive T-lymphocyte selection","type":"exact"}],"termid":"GO:0043368"}


id: PBO:0074985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-27","termid":"PBO:0074985"}


id: GO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from the carotid and aortic bodies is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"},{"relation_name":"part_of","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by chemoreceptor signalling","type":"exact"}],"termid":"GO:0002008"}


id: GO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TRAF-type zinc finger (zf-TRAF) domain interaction.","definition_xrefs":["InterPro:IPR001293","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete zf-TRAF domain-mediated complex assembly (obsolete GO:0071534)","synonyms":[{"name":"TRAF-type zinc finger domain-mediated complex assembly","type":"exact"},{"name":"zinc finger TRAF-type domain-mediated complex assembly","type":"exact"},{"name":"zinc-finger-TRAF domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071534"}


id: FYPO:0009106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are located closer to the cell equator during telophase of the mitotic cell cycle when compared to wild-type cells.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during mitotic telophase","termid":"FYPO:0009105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"nucleus mislocalized towards cell equator during mitotic telophase","synonyms":[{"name":"nuclear displaced towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displaced towards cytokinetic ring during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cytokinetic ring during mitotic telophase","type":"exact"}],"termid":"FYPO:0009106"}


id: PBO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 5","termid":"PBO:0042270"}


id: GO:0030297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a transmembrane receptor protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activator activity","termid":"GO:0030296"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase activator activity","termid":"GO:0030297"}


id: FYPO:0006362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the lncRNA borderline are present at lower levels than normal.","definition_xrefs":["PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased borderline-derived siRNA level","synonyms":[{"name":"decreased accumulation of borderline-derived siRNA","type":"exact"},{"name":"decreased accumulation of siRNAs homologous to borderline","type":"related"},{"name":"decreased borderline-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased borderline-derived siRNA level during vegetative growth","type":"exact"},{"name":"decreased brdrRNA-derived siRNA level","type":"exact"},{"name":"decreased level of borderline-derived siRNA","type":"exact"},{"name":"decreased level of siRNAs homologous to borderline","type":"related"},{"name":"reduced borderline-derived siRNA level","type":"exact"}],"termid":"FYPO:0006362"}


id: GO:0009133
data:
  {"annotated_genes":["SJAG_00885","SJAG_02038","SJAG_02874","SJAG_04657","SJAG_04665","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[111618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[103325,88539,91592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[114038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[111619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02038":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside diphosphate anabolism","type":"exact"},{"name":"nucleoside diphosphate biosynthesis","type":"exact"},{"name":"nucleoside diphosphate formation","type":"exact"},{"name":"nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009133","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0046705":null}}


id: GO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of sphingolipids between membranes in which a sphingolipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","GOC:krc","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intermembrane sphingolipid transfer","termid":"GO:0120012"}


id: PBO:0080240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 3","termid":"PBO:0080240"}


id: PBO:0072974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 5, pseudogene","termid":"PBO:0072974"}


id: PBO:0065012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 16","termid":"PBO:0065012"}


id: GO:0032688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-beta production","termid":"GO:0032648"},{"relation_name":"negatively_regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interferon-beta production","secondary_identifiers":["GO:0035548","GO:0045358"],"synonyms":[{"name":"down regulation of interferon-beta production","type":"exact"},{"name":"down-regulation of interferon-beta production","type":"exact"},{"name":"downregulation of interferon-beta production","type":"exact"},{"name":"inhibition of interferon-beta production","type":"narrow"},{"name":"negative regulation of IFN-beta production","type":"exact"},{"name":"negative regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-beta secretion","type":"narrow"}],"termid":"GO:0032688"}


id: GO:0006051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine metabolic process","synonyms":[{"name":"N-acetylmannosamine metabolism","type":"exact"}],"termid":"GO:0006051"}


id: PBO:0044682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4 antisense RNA 1","termid":"PBO:0044682"}


id: GO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid catabolic process","synonyms":[{"name":"monoterpenoid breakdown","type":"exact"},{"name":"monoterpenoid catabolism","type":"exact"},{"name":"monoterpenoid degradation","type":"exact"}],"termid":"GO:0016100"}


id: GO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change to the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in modulation of platelet aggregation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044365"}


id: PBO:0090934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3","termid":"PBO:0090934"}


id: PBO:0029936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_curved_septated_cells_(obsolete_FYPO:0002301)","termid":"PBO:0029936"}


id: GO:1902750
data:
  {"annotated_genes":["SJAG_01010","SJAG_03695","SJAG_01605","SJAG_01680","SJAG_00318","SJAG_04332","SJAG_01076","SJAG_01118","SJAG_01429","SJAG_03602","SJAG_03927","SJAG_02858","SJAG_02074","SJAG_01873","SJAG_03942","SJAG_04394","SJAG_01084","SJAG_05373","SJAG_04287","SJAG_03854","SJAG_02723","SJAG_03067","SJAG_04280","SJAG_02332","SJAG_04597","SJAG_02563","SJAG_01205","SJAG_00640","SJAG_00526","SJAG_03026","SJAG_00600","SJAG_03160","SJAG_01044","SJAG_01855","SJAG_02592","SJAG_01146","SJAG_02098","SJAG_02576","SJAG_03073","SJAG_02266","SJAG_02392","SJAG_04671","SJAG_00364","SJAG_02771","SJAG_00082","SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102677,112110,87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[90509,86127,96610,97509,112053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[90044,105384,108091,99400,95440,85260,96611,95274,102680,103903,112112,112847,87535,113137,113302,90066,88629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90640,91952,94528,112055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[97127,105385,85261,95441,84703,87895,96612,102681,86344,87536,107787,90046,113056,113730,110315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[102711,107490,103076,107881,86128,91954,97071,89306,112056,89019,104636,89664,110316,108538,90469,100565,110521,107620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[107621,112057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GO_REF:0000058","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"negatively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03160":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"down-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"downregulation of cell cycle G2/M phase transition","type":"exact"},{"name":"inhibition of cell cycle G2/M phase transition","type":"narrow"}],"termid":"GO:1902750","terms_by_termid":{"GO:0007095":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null}}


id: PBO:0063495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 3","termid":"PBO:0063495"}


id: PBO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 2","termid":"PBO:0061555"}


id: SO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for scaRNA possessing both box C/D and box H/ACA sequence motifs, guiding both the methylation and pseudouridylation of snRNAs.","definition_xrefs":["PMID:24659245","PMID:17099227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA_gene","termid":"SO:0002339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-D_H_ACA_box_scaRNA_gene","synonyms":[{"name":"C/D-H/ACA scaRNA gene","type":"exact"}],"termid":"SO:0002374"}


id: FYPO:0003903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells are grown at a temperature lower than standard.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability at low temperature","synonyms":[{"name":"decreased viability at low temperature","type":"exact"},{"name":"loss of cell population viability at low temperature","type":"exact"},{"name":"loss of viability at restrictive temperature","type":"related"},{"name":"reduced viability at low temperature","type":"exact"}],"termid":"FYPO:0003903"}


id: GO:1904141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","PMID:19100238","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell migration","synonyms":[{"name":"activation of microglial cell migration","type":"narrow"},{"name":"up regulation of microglial cell migration","type":"exact"},{"name":"up-regulation of microglial cell migration","type":"exact"},{"name":"upregulation of microglial cell migration","type":"exact"}],"termid":"GO:1904141"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: PBO:0043323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 1","termid":"PBO:0043323"}


id: FYPO:0002842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromere outer repeat","synonyms":[{"name":"decreased protein localisation to centromere outer repeat","type":"exact"},{"name":"decreased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"decreased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to pericentric region","type":"related"},{"name":"decreased protein localization to pericentromeric region","type":"related"},{"name":"reduced protein localization to centromere outer repeat","type":"exact"}],"termid":"FYPO:0002842"}


id: PBO:0076201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 11","termid":"PBO:0076201"}


id: PBO:0065613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 7","termid":"PBO:0065613"}


id: GO:0005874
data:
  {"annotated_genes":["SJAG_00723","SJAG_05220","SJAG_02286","SJAG_03052","SJAG_00930","SJAG_02384","SJAG_01196","SJAG_01224","SJAG_04387","SJAG_02040","SJAG_02509","SJAG_02695","SJAG_01613","SJAG_03540","SJAG_01775","SJAG_01297","SJAG_00332","SJAG_00845","SJAG_04003","SJAG_00140","SJAG_02624","SJAG_05266","SJAG_01330","SJAG_02336","SJAG_00851","SJAG_02761","SJAG_00030","SJAG_02045","SJAG_03264","SJAG_01546","SJAG_00773","SJAG_03073","SJAG_04841","SJAG_00655","SJAG_02656","SJAG_00918","SJAG_02848","SJAG_04745","SJAG_01837","SJAG_00113","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85100,92863,96029,98837,100953,104907,108185,115180],"is_not":false,"summary":null,"term":"GO:0005874"},{"annotations":[108183,103484,100084,87478,95288,103273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[87480,94705,97492,99957,95289,104306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[91301,93667,99821],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[108814,93375,93070,114656,91302,95290,96444,103274,114138,87481,87255,99823,85751,103485,97493,110092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[98399,99824,114657,85752,96446,99959,93071,110093],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[83914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[93073,110097,99825],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990752"},{"annotations":[95294,96449],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[87483,114142,100704,115247,84743,95296],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[87484,99965,99618,104312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[93074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[103564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[102369,97497,114663,96451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[95299,103565,114144,94709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[87487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[90868,95301,97500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[97501,93075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[87489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[93385,99778,112714,96593,85879,74674,103488,108187,110152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02509":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_02848":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"secondary_identifiers":["NIF_Subcellular:sao1846835077","Wikipedia:Microtubule"],"synonyms":[{"name":"microtubuli","type":"exact"},{"name":"microtubulus","type":"exact"},{"name":"neurotubule","type":"narrow"}],"termid":"GO:0005874","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990752":null,"GO:1990941":null}}


id: PBO:0049685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAGLR opposite strand lncRNA","termid":"PBO:0049685"}


id: PBO:0050481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A10","termid":"PBO:0050481"}


id: PBO:0078970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 2-1","termid":"PBO:0078970"}


id: PBO:0057853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3164","termid":"PBO:0057853"}


id: PBO:0063750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 15","termid":"PBO:0063750"}


id: PBO:0029457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers","termid":"PBO:0029457"}


id: FYPO:0006327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the medial cortical nodes is abnormal. Normally, myosin and other node proteins are turned over between the nodes and elsewhere at rates consistent for each protein.","definition_xrefs":["PMID:21422229","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"abnormal rate of protein exchange in medial cortical node","synonyms":[{"name":"abnormal rate of protein exchange in medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal rate of protein exchange in medial cortical node during vegetative growth","type":"exact"}],"termid":"FYPO:0006327"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0065357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosaposin","termid":"PBO:0065357"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: FYPO:0005194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation during mitotic S phase","synonyms":[{"name":"decreased protein breakdown during mitotic S phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic S phase","type":"exact"},{"name":"decreased protein catabolism during mitotic S phase","type":"exact"},{"name":"decreased protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic S phase","type":"exact"}],"termid":"FYPO:0005194"}


id: PBO:0069943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1236, pseudogene","termid":"PBO:0069943"}


id: SO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-helical region of nucleic acid formed by base-pairing between adjacent (inverted) complementary sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_sequence_secondary_structure","termid":"SO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_loop","secondary_identifiers":["http://en.wikipedia.org/wiki/Stem_loop","SO:0000019"],"synonyms":[{"name":"INSDC_feature:stem_loop","type":"exact"},{"name":"RNA_hairpin_loop","type":"exact"},{"name":"stem loop","type":"exact"},{"name":"stem-loop","type":"exact"}],"termid":"SO:0000313"}


id: _global:is_kinase_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"_global:molecular_interaction_relation_helper_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_kinase_activity","secondary_identifiers":["RO:0002481"],"termid":"_global:is_kinase_activity"}


id: PBO:0065318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 41","termid":"PBO:0065318"}


id: GO:0006730
data:
  {"annotated_genes":["SJAG_01466","SJAG_01616","SJAG_06611","SJAG_04156","SJAG_03712","SJAG_01766","SJAG_03914","SJAG_03224","SJAG_00106","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100811,108473,109565],"is_not":false,"summary":null,"term":"GO:0006730"},{"annotations":[94508,92743,87409,90587,100654,100848,108474,104411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.","definition_xrefs":["GOC:mah","GOC:pde","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03224":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"one-carbon metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019753","UM-BBD_pathwayID:C1cyc","GO:0019754"],"synonyms":[{"name":"one carbon metabolic process","type":"exact"},{"name":"one carbon metabolism","type":"exact"},{"name":"one-carbon metabolism","type":"exact"},{"name":"one-carbon transfer metabolic process","type":"exact"},{"name":"one-carbon transfer metabolism","type":"exact"}],"termid":"GO:0006730","terms_by_termid":{"GO:0006730":null,"GO:0035999":null}}


