# terms

id: GO:0043590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a bacterial cell to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial nucleoid","termid":"GO:0043590"}


id: GO:0052924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-nonaprenyl diphosphate.","definition_xrefs":["RHEA:27594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09251","EC:2.5.1.85","MetaCyc:RXN-11486"],"synonyms":[{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"}],"termid":"GO:0052924"}


id: PR:Q9Y7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC9B6.03 gene.","definition_xrefs":["UniProtKB:Q9Y7M3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE-type zinc finger-containing protein C9B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.03","synonyms":[{"name":"Spom972h-SPBC9B6.03","type":"exact"}],"termid":"PR:Q9Y7M3"}


id: PBO:0061536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 pseudogene 1","termid":"PBO:0061536"}


id: GO:0007478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the leg disc are generated and organized. This includes the transformation of a leg imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the leg, coxa and ventral thoracic pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"leg disc development","termid":"GO:0035218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc morphogenesis","synonyms":[{"name":"leg disc metamorphosis","type":"exact"}],"termid":"GO:0007478"}


id: PBO:0078105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC12 antisense RNA 1","termid":"PBO:0078105"}


id: GO:2001167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B ubiquitination (obsolete GO:2001167)","termid":"GO:2001167"}


id: PBO:0001734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (predicted)","termid":"PBO:0001734"}


id: GO:0070837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of dehydroascorbate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Dehydroascorbate, 5-(1,2-dihydroxyethyl)furan-2,3,4(5H)-trione, is an oxidized form of vitamin C.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dehydroascorbic acid transport","synonyms":[{"name":"dehydroascorbate transport","type":"exact"}],"termid":"GO:0070837"}


id: PBO:0065006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM10 divergent transcript","termid":"PBO:0065006"}


id: GO:0004455
data:
  {"annotated_genes":["SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107157],"is_not":false,"summary":null,"term":"GO:0004455"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2,3-dihydroxy-3-methylbutanoate + NADP+ = (S)-2-hydroxy-2-methyl-3-oxobutanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ketol-acid reductoisomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACETOLACTREDUCTOISOM-RXN","RHEA:22068"],"synonyms":[{"name":"(R)-2,3-dihydroxy-3-methylbutanoate:NADP+ oxidoreductase (isomerizing)","type":"related"},{"name":"2-hydroxy-3-keto acid reductoisomerase activity","type":"related"},{"name":"acetohydroxy acid isomeroreductase activity","type":"related"},{"name":"acetohydroxy acid reductoisomerase activity","type":"related"},{"name":"acetolactate reductoisomerase activity","type":"related"},{"name":"alpha-keto-beta-hydroxylacyl reductoisomerase activity","type":"related"},{"name":"dihydroxyisovalerate (isomerizing) dehydrogenase activity","type":"related"},{"name":"dihydroxyisovalerate dehydrogenase (isomerizing) activity","type":"related"},{"name":"isomeroreductase activity","type":"related"},{"name":"ketol acid reductoisomerase activity","type":"related"},{"name":"reductoisomerase activity","type":"related"}],"termid":"GO:0004455","terms_by_termid":{"GO:0004455":null}}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"},{"relation_name":"is_a","term_name":"O-decanoyltransferase activity","termid":"GO:0034325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alcohol O-decanoyltransferase activity","termid":"GO:0034322"}


id: GO:1990952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the breakdown of a manchette.","definition_xrefs":["PMID:22319670","PMID:24440897","GOC:krc","PMID:26792866"],"gene_count":0,"genotype_count":0,"name":"obsolete manchette disassembly (obsolete GO:1990952)","synonyms":[{"name":"manchette clearance","type":"exact"}],"termid":"GO:1990952"}


id: PBO:0027913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027913"}


id: GO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interferon-beta production.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type I interferon production","termid":"GO:0032481"},{"relation_name":"is_a","term_name":"regulation of interferon-beta production","termid":"GO:0032648"},{"relation_name":"positively_regulates","term_name":"interferon-beta production","termid":"GO:0032608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interferon-beta production","secondary_identifiers":["GO:0035549","GO:0045359"],"synonyms":[{"name":"activation of interferon-beta production","type":"narrow"},{"name":"positive regulation of IFN-beta production","type":"exact"},{"name":"positive regulation of interferon-beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interferon-beta secretion","type":"narrow"},{"name":"stimulation of interferon-beta production","type":"narrow"},{"name":"up regulation of interferon-beta production","type":"exact"},{"name":"up-regulation of interferon-beta production","type":"exact"},{"name":"upregulation of interferon-beta production","type":"exact"}],"termid":"GO:0032728"}


id: PBO:0001469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2 (predicted)","termid":"PBO:0001469"}


id: PBO:0048445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrulation brain homeobox 1","termid":"PBO:0048445"}


id: PBO:0056531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCC regulator of WNT signaling pathway","termid":"PBO:0056531"}


id: GO:0033644
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Double layer of lipid molecules as it encloses host cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell membrane","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0033644","terms_by_termid":{"GO:0085039":null}}


id: FYPO:0001009
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115417,115475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring.","definition_xrefs":["PomBase:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation","type":"related"},{"name":"abolished contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic ring assembly","type":"related"},{"name":"abolished cytokinetic ring formation","type":"related"},{"name":"abolished mitotic contractile ring assembly","type":"exact"},{"name":"actomyosin contractile ring assembly abolished","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent","type":"related"}],"termid":"FYPO:0001009","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0086572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR064W is not an essential gene","termid":"PBO:0086572"}


id: PBO:0048985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled bile acid receptor 1","termid":"PBO:0048985"}


id: GO:1901217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of holin activity.","definition_xrefs":["GOC:bm","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of holin activity (obsolete GO:1901217)","termid":"GO:1901217"}


id: PR:O74333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhn1 gene.","definition_xrefs":["UniProtKB:O74333","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.13","synonyms":[{"name":"Spom972h-fhn1","type":"exact"}],"termid":"PR:O74333"}


id: GO:0003731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with the 7-methylguanosine cap at the 5' end of a nascent messenger RNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cap binding (obsolete GO:0003731)","synonyms":[{"name":"mRNA cap binding","type":"exact"}],"termid":"GO:0003731"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: PBO:0083447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5","termid":"PBO:0083447"}


id: PBO:0039987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1 pseudogene 1","termid":"PBO:0039987"}


id: GO:0033976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide, and (R)-2-haloacid + H2O = (S)-2-hydroxyacid + halide.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-haloacid dehalogenase (configuration-inverting) activity","secondary_identifiers":["MetaCyc:2-HALOACID-DEHALOGENASE-RXN","MetaCyc:RXN-6264"],"synonyms":[{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"DL-2-haloacid dehalogenase (inversion of configuration) activity","type":"related"},{"name":"DL-2-haloacid dehalogenase activity","type":"broad"},{"name":"DL-2-haloacid halidohydrolase (inversion of configuration) activity","type":"related"},{"name":"DL-DEXi","type":"related"}],"termid":"GO:0033976"}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: PBO:0030808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_cortex","termid":"PBO:0030808"}


id: PBO:0082094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase (decarboxylating); catalyzes an NADPH regenerating reaction in the pentose phosphate pathway; required for growth on D-glucono-delta-lactone; GND2 has a paralog, GND1, that arose from the whole genome duplication","termid":"PBO:0082094"}


id: PBO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter","termid":"PBO:0002123"}


id: GO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"broad"},{"name":"Moco metabolism","type":"broad"},{"name":"W-molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0042046"}


id: FYPO:0000059
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: PBO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1 (predicted)","termid":"PBO:0001233"}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: SO:1001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001244 alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping (obsolete SO:1001244)","synonyms":[{"name":"alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non-overlapping","type":"related"}],"termid":"SO:1001244"}


id: RO:0002089
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  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_before","termid":"RO:0002089"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: PBO:0044697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX3 interacting lncRNA 1","termid":"PBO:0044697"}


id: PBO:0052984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3","termid":"PBO:0052984"}


id: GO:0002579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation","synonyms":[{"name":"activation of antigen processing and presentation","type":"narrow"},{"name":"stimulation of antigen processing and presentation","type":"narrow"},{"name":"up regulation of antigen processing and presentation","type":"exact"},{"name":"up-regulation of antigen processing and presentation","type":"exact"},{"name":"upregulation of antigen processing and presentation","type":"exact"}],"termid":"GO:0002579"}


id: PBO:0084857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0084857"}


id: GO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pyoverdine metabolic process","synonyms":[{"name":"pyoverdine metabolism","type":"exact"}],"termid":"GO:0002048"}


id: PR:Q9P7K2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7K2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.03","synonyms":[{"name":"Spom972h-SPCC24B10.03","type":"exact"}],"termid":"PR:Q9P7K2"}


id: MOD:00180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-sulfo-L-cysteine.","definition_xrefs":["PubMed:12876326","PubMed:14752058","RESID:AA0171","Unimod:40#C","PubMed:643076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-sulfo-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(sulfosulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(sulfothio)propanoic acid","type":"exact"},{"name":"3-(sulfosulfanyl)-L-alanine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"S-sulfo-L-cysteine","type":"exact"},{"name":"S-sulfocysteine","type":"exact"},{"name":"SSulfCys","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"cysteine sulfate thioester","type":"exact"},{"name":"cysteine-S-sulfonic acid","type":"exact"}],"termid":"MOD:00180"}


id: PBO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 5","termid":"PBO:0061274"}


id: PBO:0081013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB46 antisense RNA 1","termid":"PBO:0081013"}


id: FYPO:0003086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding","termid":"FYPO:0003086"}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: GO:0044142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's increase in size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont on or near host surface (obsolete GO:0044142)","termid":"GO:0044142"}


id: GO:0030901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).","direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain development","synonyms":[{"name":"mesencephalon development","type":"exact"}],"termid":"GO:0030901"}


id: SO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality inhering in a variant by virtue of its origin.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_origin","synonyms":[{"name":"variant origin","type":"exact"}],"termid":"SO:0001762"}


id: FYPO:0003580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Sad1 accumulates is greater than normal during a cellular response to DNA damage.","definition_xrefs":["PMID:24943839","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Sad1 foci during response to DNA damage","synonyms":[{"name":"increased number of Sad1 foci during DNA damage response","type":"exact"},{"name":"increased number of Sad1 foci during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased number of Sad1 foci during response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003580"}


id: PBO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member A","termid":"PBO:0047155"}


id: GO:0097675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).","definition_xrefs":["GOC:jd","PMID:14747994","PMID:15147268","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Hrt3/Pof7 ubiquitin ligase complex","termid":"GO:0097675"}


id: FYPO:0002430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions","synonyms":[{"name":"inviable following spore germination, multiple cell divisions","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions","type":"exact"}],"termid":"FYPO:0002430"}


id: PBO:0053583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 606","termid":"PBO:0053583"}


id: GO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nylon, a polymer where the main polymer chain comprises recurring amide groups; these compounds are generally formed from combinations of diamines, diacids and amino acids.","definition_xrefs":["UniProtKB-KW:KW-0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nylon metabolic process","synonyms":[{"name":"nylon metabolism","type":"exact"}],"termid":"GO:0042198"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: PBO:0064513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit K","termid":"PBO:0064513"}


id: MOD:00847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for two (16)O atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O disubstituted residue","termid":"MOD:00847"}


id: PBO:0086360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 7-keto-8-aminopelargonic acid (KAPA) synthetase; in sake strains and S. cerevisiae strains YJM627 and A364a; involved in the biotin biosynthesis pathway; homologs present in S. bayanus, S. paradoxus, S. mikatae and S. kudriavzevii","termid":"PBO:0086360"}


id: GO:0044068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the execution of a cellular process in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"},{"relation_name":"regulates","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cellular process","synonyms":[{"name":"modulation by symbiont of host cellular process","type":"exact"},{"name":"modulation of host cellular process by symbiont","type":"exact"},{"name":"regulation by symbiont of host cellular process","type":"exact"},{"name":"regulation of host cellular process by symbiont","type":"exact"}],"termid":"GO:0044068"}


id: GO:0019438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aromatic compound biosynthetic process (obsolete GO:0019438)","termid":"GO:0019438"}


id: FYPO:0007118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to leucine starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"increased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"increased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"increased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during leucine starvation","type":"exact"},{"name":"increased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"increased transcript level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007118"}


id: PBO:0003894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-K ortholog, Sim4","termid":"PBO:0003894"}


id: PBO:0005284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinosin family","termid":"PBO:0005284"}


id: FYPO:0001420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow at the same rate as wild type in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"},{"relation_name":"is_a","term_name":"normal cell population growth rate","termid":"FYPO:0001419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal vegetative cell population growth rate","synonyms":[{"name":"normal growth rate","type":"broad"},{"name":"normal vegetative cell population proliferation","type":"related"},{"name":"normal vegetative cell proliferation","type":"related"}],"termid":"FYPO:0001420"}


id: PBO:0067012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 20, pseudogene","termid":"PBO:0067012"}


id: PBO:0076961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3 like","termid":"PBO:0076961"}


id: GO:0010356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.","definition_xrefs":["EC:2.5.1.116","PMID:16989822","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"homogentisate geranylgeranyltransferase activity","secondary_identifiers":["RHEA:38003","MetaCyc:RXN-14929"],"synonyms":[{"name":"homogentisate geranylgeranyl transferase activity","type":"exact"}],"termid":"GO:0010356"}


id: FYPO:0007364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyruvate kinase activity","termid":"FYPO:0007363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased pyruvate kinase activity","termid":"FYPO:0007364"}


id: PR:P40998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine thiazole synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.01","synonyms":[{"name":"Spom972h-thi2","type":"exact"},{"name":"thiazole biosynthetic enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40998"}


id: GO:0071073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phospholipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phospholipid biosynthetic process","synonyms":[{"name":"activation of phospholipid biosynthetic process","type":"narrow"},{"name":"positive regulation of phospholipid anabolism","type":"exact"},{"name":"positive regulation of phospholipid biosynthesis","type":"exact"},{"name":"positive regulation of phospholipid formation","type":"exact"},{"name":"positive regulation of phospholipid synthesis","type":"exact"},{"name":"stimulation of phospholipid biosynthetic process","type":"narrow"},{"name":"up regulation of phospholipid biosynthetic process","type":"exact"},{"name":"up-regulation of phospholipid biosynthetic process","type":"exact"},{"name":"upregulation of phospholipid biosynthetic process","type":"exact"}],"termid":"GO:0071073"}


id: PBO:0084847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation","termid":"PBO:0084847"}


id: PBO:0055435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2865","termid":"PBO:0055435"}


id: PBO:0076657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 19","termid":"PBO:0076657"}


id: PBO:0064549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 11, pseudogene","termid":"PBO:0064549"}


id: GO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter secretion","secondary_identifiers":["GO:0010554"],"synonyms":[{"name":"neurotransmitter release","type":"exact"},{"name":"neurotransmitter secretory pathway","type":"exact"}],"termid":"GO:0007269"}


id: PBO:0109026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3102","termid":"PBO:0109026"}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: GO:1900037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to hypoxia","synonyms":[{"name":"regulation of cellular response to hypoxic stress","type":"exact"},{"name":"regulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900037"}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: GO:0048878
data:
  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id: PBO:0058536
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id: GO:0102941
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-dihydroxyanisole + S-adenosyl-L-methionine = H+ + 3,5-dimethoxyphenol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"3,5-dihydroxyanisole O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9021"],"termid":"GO:0102941"}


id: PBO:0065305
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 22","termid":"PBO:0065305"}


id: PBO:0069179
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: PBO:0084011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen phosphorylase required for the mobilization of glycogen; non-essential; regulated by cyclic AMP-mediated phosphorylation; phosphorylation by Cdc28p may coordinately regulate carbohydrate metabolism and the cell cycle; expression is regulated by stress-response elements and by the HOG MAP kinase pathway","termid":"PBO:0084011"}


id: GO:0002539
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any prostaglandin following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostaglandin production involved in inflammatory response","synonyms":[{"name":"prostaglandin production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002539"}


id: GO:1904093
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of autophagic cell death.","definition_xrefs":["PMID:25736836","GO_REF:0000058","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"negatively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagic cell death","synonyms":[{"name":"down regulation of autophagic cell death","type":"exact"},{"name":"down regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down regulation of type II programmed cell death","type":"related"},{"name":"down-regulation of autophagic cell death","type":"exact"},{"name":"down-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"down-regulation of type II programmed cell death","type":"related"},{"name":"downregulation of autophagic cell death","type":"exact"},{"name":"downregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"downregulation of type II programmed cell death","type":"related"},{"name":"inhibition of autophagic cell death","type":"narrow"},{"name":"inhibition of programmed cell death by macroautophagy","type":"narrow"},{"name":"inhibition of type II programmed cell death","type":"related"},{"name":"negative regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"negative regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904093"}


id: PBO:0091958
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal51","termid":"PBO:0091958"}


id: SO:0002186
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of genomic sequence known to undergo mutational events with greater frequency than expected by chance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutational_hotspot","synonyms":[{"name":"mutational hotspot","type":"exact"}],"termid":"SO:0002186"}


id: GO:0034539
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',5,5'-tetrabromobisphenol A + 2 H+ + 2 e- = 3,3',5-tribromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,3',5,5'-tetrabromobisphenol A reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034539"}


id: PBO:0015710
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c","termid":"PBO:0015710"}


id: PBO:0091683
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA-Like Protein","termid":"PBO:0091683"}


id: GO:0071047
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id: PBO:0003727
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  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally activates genes required for anaerobic growth under oxygen-limiting conditions","termid":"PBO:0003727"}


id: PBO:0047415
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 7","termid":"PBO:0047415"}


id: GO:0043386
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id: GO:0061631
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id: MOD:01325
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:7744761","Unimod:254#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +26","termid":"MOD:00577"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26 - site K","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:01325"}


id: GO:0046240
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete xylene biosynthetic process (obsolete GO:0046240)","synonyms":[{"name":"xylene anabolism","type":"exact"},{"name":"xylene biosynthesis","type":"exact"},{"name":"xylene biosynthetic process","type":"exact"},{"name":"xylene formation","type":"exact"},{"name":"xylene synthesis","type":"exact"}],"termid":"GO:0046240"}


id: GO:2000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"positively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of astrocyte chemotaxis","termid":"GO:2000464"}


id: PBO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","termid":"PBO:0011124"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: FYPO:0008204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell exhibits randomly misoriented actin and myosin II filaments, eventually forming a regular orthogonal actomyosin contractile ring. Although the onset of filaments assembly is not delayed, the cell takes more time complete the formation of an orthogonal actomyosin contractile ring.","direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of actomyosin contractile ring assembly","termid":"FYPO:0000729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0004803","FYPO:0000032","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed orthogonal actomyosin contractile ring assembly from randomly oriented actomyosin filaments","termid":"FYPO:0008204"}


id: GO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, during the formation of a biofilm composed of microorganisms of the same species.","definition_xrefs":["GOC:jl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:0043709"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: PBO:0050963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 pseudogene 1","termid":"PBO:0050963"}


id: PBO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLOCK interacting pacemaker","termid":"PBO:0043172"}


id: PATO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000537 acid sensitivity value (obsolete PATO:0000537)","termid":"PATO:0000537"}


id: GO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving very long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a very long-chain fatty-acyl group. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty-acyl-CoA metabolic process","synonyms":[{"name":"very long-chain fatty acyl CoA metabolic process","type":"exact"},{"name":"very long-chain fatty acyl-CoA metabolism","type":"exact"}],"termid":"GO:0036111"}


id: PBO:0030621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maltase_activity","termid":"PBO:0030621"}


id: PBO:0083926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fumarase; converts fumaric acid to L-malic acid in the TCA cycle; cytosolic and mitochondrial distribution determined by the N-terminal targeting sequence, protein conformation, and status of glyoxylate shunt; phosphorylated in mitochondria","termid":"PBO:0083926"}


id: GO:2000034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed development","termid":"GO:0080050"},{"relation_name":"regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed maturation","termid":"GO:2000034"}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: GO:0008701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = acetaldehyde + pyruvate.","definition_xrefs":["RHEA:22624","EC:4.1.3.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"4-hydroxy-2-oxovalerate aldolase activity","secondary_identifiers":["KEGG_REACTION:R00750","MetaCyc:MHPELY-RXN","UM-BBD_enzymeID:e0077","GO:0018804"],"synonyms":[{"name":"4-hydroxy-2-ketovalerate aldolase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate pyruvate-lyase activity","type":"related"},{"name":"4-hydroxy-2-oxovalerate pyruvate-lyase activity","type":"related"},{"name":"DmpG","type":"related"},{"name":"HOA","type":"related"}],"termid":"GO:0008701"}


id: PBO:0080399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS29 retromer complex component","termid":"PBO:0080399"}


id: PBO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 3","termid":"PBO:0048684"}


id: PBO:0058012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3938","termid":"PBO:0058012"}


id: GO:0032280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that lacks an electron dense postsynaptic specialization. In vertebtrates, these occur primarily on dendrite shafts and neuronal cell bodies and involve persynapses containing clusters of predominantly flattened or elongated vesicles and are typically inhibitory.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric synapse","synonyms":[{"name":"Gray's type II synapse","type":"exact"}],"termid":"GO:0032280"}


id: GO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signalling pathway involved in heart process","type":"exact"},{"name":"angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086098"}


id: PBO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 9","termid":"PBO:0072120"}


id: GO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:mtg_muscle","GOC:ef","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"},{"relation_name":"regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031449"}


id: GO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a microglial cell. Microglia are glial cells that act as the immune cells of the central nervous system. They form part of the supporting structure of this system.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"macrophage differentiation","termid":"GO:0030225"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia differentiation","synonyms":[{"name":"microglial cell differentiation","type":"exact"}],"termid":"GO:0014004"}


id: PBO:0068037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 342","termid":"PBO:0068037"}


id: GO:1901561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to benomyl (obsolete GO:1901561)","termid":"GO:1901561"}


id: PBO:0063520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphatase","termid":"PBO:0063520"}


id: PBO:0005197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21 (predicted)","termid":"PBO:0005197"}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: FYPO:0006177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches move within the cell cortex in a less directed manner than normal. The rate of movement may be normal.","definition_xrefs":["PMID:11231572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"undirected actin cortical patch movement","synonyms":[{"name":"undirected actin cortical patch localization","type":"related"},{"name":"undirected actin patch movement","type":"exact"}],"termid":"FYPO:0006177"}


id: GO:1902565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil activation.","definition_xrefs":["PMID:17588661","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of neutrophil activation","termid":"GO:1902563"},{"relation_name":"positively_regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil activation","synonyms":[{"name":"activation of neutrophil activation","type":"narrow"},{"name":"up regulation of neutrophil activation","type":"exact"},{"name":"up-regulation of neutrophil activation","type":"exact"},{"name":"upregulation of neutrophil activation","type":"exact"}],"termid":"GO:1902565"}


id: PBO:0108692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec72","termid":"PBO:0108692"}


id: PBO:0050664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 2","termid":"PBO:0050664"}


id: PBO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_input_(obsolete_RO:0002401)","termid":"PBO:0034250"}


id: PBO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B","termid":"PBO:0043668"}


id: PBO:0068999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 243, pseudogene","termid":"PBO:0068999"}


id: GO:0075113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated signal transduction (obsolete GO:0075113)","synonyms":[{"name":"positive regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075113"}


id: PBO:0027072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication_lagging_strand_elongation_at_telomere","termid":"PBO:0027072"}


id: PBO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030830"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: FYPO:0008017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on glutamate nitrogen source","synonyms":[{"name":"normal cell population growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0008017"}


id: PBO:0064389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 11","termid":"PBO:0064389"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["PMID:16123220","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: PBO:0028933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_orotidine_level","termid":"PBO:0028933"}


id: GO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"negatively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK5 cascade","synonyms":[{"name":"down regulation of BMK cascade","type":"exact"},{"name":"down-regulation of BMK cascade","type":"exact"},{"name":"downregulation of BMK cascade","type":"exact"},{"name":"inhibition of BMK cascade","type":"narrow"},{"name":"negative regulation of BMK cascade","type":"exact"},{"name":"negative regulation of BMK signaling pathway","type":"exact"},{"name":"negative regulation of BMK signalling pathway","type":"exact"},{"name":"negative regulation of BMK1 cascade","type":"exact"},{"name":"negative regulation of ERK5 signaling pathway","type":"exact"},{"name":"negative regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070377"}


id: PBO:0029321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029321"}


id: PATO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000024 sporophytic compatability (obsolete PATO:0000024)","termid":"PATO:0000024"}


id: PBO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor alpha","termid":"PBO:0072718"}


id: GO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed migration of individual cells and small groups of cells toward the dorsal midline during gastrulation. This process does not require cell rearrangement.","definition_xrefs":["GOC:dph","PMID:12062082","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal convergence","termid":"GO:0060030"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: PBO:0038463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 3","termid":"PBO:0038463"}


id: GO:0097440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.","definition_xrefs":["NIF_Subcellular:sao273773228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical dendrite","termid":"GO:0097440"}


id: PR:O59807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC550.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.09","synonyms":[{"name":"Spom972h-SPCC550.09","type":"exact"},{"name":"peroxin-32 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59807"}


id: PR:000027552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that has been post-translationally modified to include at least one phosphorylated residue.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated form","synonyms":[{"name":"HTA2/PhosRes+","type":"exact"}],"termid":"PR:000027552"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: GO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of cerebral cortex neuronal precursors tangentially through the cortex using interaction of the migrating cells with axons of other neurons.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","PMID:12626695","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-axon interactions","termid":"GO:0021824"}


id: GO:0004113
data:
  {"annotated_genes":["SJAG_01428","SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86772,97132],"is_not":false,"summary":null,"term":"GO:0004113"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate.","definition_xrefs":["EC:3.1.4.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14489","MetaCyc:3.1.4.37-RXN"],"synonyms":[{"name":"2',3'-cyclic AMP phosphodiesterase activity","type":"related"},{"name":"2',3'-cyclic nucleoside monophosphate phosphodiesterase","type":"broad"},{"name":"2',3'-cyclic nucleotide 3'-phosphodiesterase activity","type":"exact"},{"name":"2',3'-cyclic nucleotide 3'-phosphohydrolase activity","type":"related"},{"name":"2',3'-cyclic nucleotide phosphohydrolase","type":"broad"},{"name":"2':3'-CNMP-3'-ase activity","type":"related"},{"name":"2':3'-cyclic nucleotide 3'-phosphodiesterase activity","type":"related"},{"name":"CNPase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide 3'-phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide phosphodiesterase","type":"broad"},{"name":"cyclic-CMP phosphodiesterase activity","type":"narrow"},{"name":"nucleoside-2',3'-cyclic-phosphate 2'-nucleotidohydrolase activity","type":"related"}],"termid":"GO:0004113","terms_by_termid":{"GO:0004113":null}}


id: PBO:0029603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transporter_activity","termid":"PBO:0029603"}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: GO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stable binary complex of a semaphorin and a plexin, together forming a functional semaphorin receptor.","definition_xrefs":["GOC:hjd","PMID:12367632","PMID:10934324","PMID:12613544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"semaphorin receptor complex","synonyms":[{"name":"plexin-neurophilin complex","type":"exact"}],"termid":"GO:0002116"}


id: GO:0001507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine catabolic process","termid":"GO:0006581"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine catabolic process in synaptic cleft","synonyms":[{"name":"acetylcholine breakdown in synaptic cleft","type":"exact"},{"name":"acetylcholine degradation in synaptic cleft","type":"exact"}],"termid":"GO:0001507"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: GO:0033594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroxyisoflavone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroxyisoflavone","termid":"GO:0033594"}


id: GO:0010808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:dph","PMID:15489511","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle priming","termid":"GO:0010808"}


id: PBO:0041643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 I","termid":"PBO:0041643"}


id: GO:0090523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome b(5) = NADP+ + 2 ferrocytochrome b(5).","definition_xrefs":["RHEA:64576","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome-b5 reductase activity, acting on NAD(P)H","termid":"GO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NADPH","synonyms":[{"name":"cytochrome-b5 reductase activity","type":"broad"}],"termid":"GO:0090523"}


id: GO:0044043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, involving more than one organism.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism glucan metabolic process (obsolete GO:0044043)","synonyms":[{"name":"multi-organism glucan metabolism","type":"exact"}],"termid":"GO:0044043"}


id: PBO:0082774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU; required for pre-18S rRNA processing, biogenesis of the small ribosomal subunit; interacts with U3 snoRNA, Mpp10p and Bfr2p; contains WD repeats, and has homology to Spb1p","termid":"PBO:0082774"}


id: GO:1990128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication initiation at the origin of replication.","definition_xrefs":["GOC:bhm","PMID:21856207"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication initiation (obsolete GO:1990128)","synonyms":[{"name":"pre-primosome complex involved in replication initiation","type":"exact"}],"termid":"GO:1990128"}


id: PBO:0082947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic light chain dynein, microtubule motor protein; required for intracellular transport and cell division; involved in mitotic spindle positioning; forms complex with dynein intermediate chain Pac11p that promotes Dyn1p homodimerization, potentiates motor processivity; Dyn2p-Pac11p complex important for interaction of dynein motor complex with dynactin complex; acts as molecular glue to dimerize, stabilize Nup82-Nsp1-Nup159 complex module of cytoplasmic pore filaments","termid":"PBO:0082947"}


id: PBO:0056477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte-associated tyrosine kinase","termid":"PBO:0056477"}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + 3-N-acetylaminoglycoside. This is acetylation of the 3-amino group of the central deoxystreptamine ring.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.60","EC:2.3.1.81","MetaCyc:GENTAMICIN-3-N-ACETYLTRANSFERASE-RXN","GO:0016991","MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"3'-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3'-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3'-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: GO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","PMID:15224092","PMID:15771591","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002474"}


id: PBO:0040265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase","termid":"PBO:0040265"}


id: PBO:0055559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2995","termid":"PBO:0055559"}


id: PBO:0051487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 2","termid":"PBO:0051487"}


id: PBO:0042185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B2 pseudogene 1","termid":"PBO:0042185"}


id: GO:0060195
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104036],"is_not":false,"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:tb","PMID:18075583","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"negatively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060195","terms_by_termid":{"GO:0060195":null}}


id: PBO:0060405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 16, NatA auxiliary subunit","termid":"PBO:0060405"}


id: PBO:0044123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 9","termid":"PBO:0044123"}


id: PBO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Sld3","termid":"PBO:0000386"}


id: PBO:0086221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with the Sit4p protein phosphatase; required for Sit4p function; member of a family of similar proteins including Sap4p, Sap155p, and Sap185p; SAP190 has a paralog, SAP185, that arose from the whole genome duplication","termid":"PBO:0086221"}


id: PBO:0079407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 1","termid":"PBO:0079407"}


id: PBO:0068490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 74, pseudogene","termid":"PBO:0068490"}


id: GO:0071514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:24492710","PMID:31896690","PMID:31965998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetic programming of gene expression","termid":"GO:0043045"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"genomic imprinting","secondary_identifiers":["Wikipedia:Genomic_imprinting"],"synonyms":[{"name":"DNA imprinting","type":"exact"},{"name":"establishment of genomic imprinting","type":"exact"},{"name":"genetic imprinting","type":"exact"}],"termid":"GO:0071514"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: FYPO:0007071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase a.","definition_xrefs":["PMID:31427431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase A","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase A","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase A","type":"exact"},{"name":"increased rate of spindle elongation during anaphase A of mitosis","type":"exact"}],"termid":"FYPO:0007071"}


id: FYPO:0003368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium fluoride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to sodium fluoride","synonyms":[{"name":"resistance to NaF","type":"exact"},{"name":"resistance to fluoride","type":"broad"},{"name":"resistance to sodium fluoride during mitotic cell cycle","type":"related"},{"name":"resistance to sodium fluoride during vegetative growth","type":"exact"},{"name":"resistant to sodium fluoride","type":"exact"}],"termid":"FYPO:0003368"}


id: GO:0090162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization of an epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell polarity","termid":"GO:0090162"}


id: GO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other lyase activity (obsolete GO:0016850)","synonyms":[{"name":"other lyase activity","type":"exact"}],"termid":"GO:0016850"}


id: GO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the amyloplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast ADPG pyrophosphorylase complex","termid":"GO:0030932"}


id: GO:0004571
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66037,91818],"is_not":false,"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["GOC:bf","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9036011","Reactome:R-HSA-901024","Reactome:R-HSA-901036","KEGG_REACTION:R05982","MetaCyc:RXN-18910","Reactome:R-HSA-901074","Reactome:R-HSA-964737","Reactome:R-HSA-6782685","Reactome:R-HSA-9036012","EC:3.2.1.113","MetaCyc:RXN-18911","Reactome:R-HSA-4793949","Reactome:R-HSA-964830","Reactome:R-HSA-964825","Reactome:R-HSA-9036008","KEGG_REACTION:R06722","Reactome:R-HSA-901039","Reactome:R-HSA-9696807"],"synonyms":[{"name":"1,2-alpha-mannosidase","type":"related"},{"name":"1,2-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"Man9-mannosidase activity","type":"narrow"},{"name":"ManI activity","type":"narrow"},{"name":"exo-alpha-1,2-mannanase activity","type":"related"},{"name":"glycoprotein processing mannosidase I","type":"related"},{"name":"mannose-9 processing alpha-mannosidase activity","type":"narrow"},{"name":"mannosidase 1A activity","type":"narrow"},{"name":"mannosidase 1B activity","type":"narrow"},{"name":"mannosidase I","type":"related"}],"termid":"GO:0004571","terms_by_termid":{"GO:0004571":null}}


id: PBO:0049656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 10, pseudogene","termid":"PBO:0049656"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","secondary_identifiers":["MetaCyc:THIOREDOX-PWY"],"synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: PBO:0017891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, likely secretory pathway component Ksh1 (predicted)","termid":"PBO:0017891"}


id: SO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome generated by recombination between two inversions; has a duplication at one end and presumed to have a deficiency or duplication at the other end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_duplication_plus_aneuploid","synonyms":[{"name":"inversion derived duplication plus aneuploid","type":"exact"}],"termid":"SO:0000549"}


id: PBO:0057893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3197","termid":"PBO:0057893"}


id: PBO:0043006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich hydrophobic domain 1","termid":"PBO:0043006"}


id: PBO:0084820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; YBR230W-A has a paralog, COQ8, that arose from the whole genome duplication","termid":"PBO:0084820"}


id: PBO:0109348
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9 [SWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTP-consensus] repeats reported (5 copies in reference)","termid":"PBO:0109348"}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["PO:0009074","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0083716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; contains 3 calcium and lipid binding domains; mRNA is targeted to bud; TCB2 has a paralog, TCB1, that arose from the whole genome duplication","termid":"PBO:0083716"}


id: GO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity in response to detection of smell.","definition_xrefs":["GOC:sart","PMID:19135896","GOC:dph","PMID:21041441","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"olfactory receptor activity","synonyms":[{"name":"odorant receptor activity","type":"exact"}],"termid":"GO:0004984"}


id: PR:O94500
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03130","PANTHER:PTHR11780:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 51 kDa subunit homolog SPBC18E5.10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.10","secondary_identifiers":["UniProtKB:O94500"],"synonyms":[{"name":"Spom972h-NDUFV1","type":"exact"}],"termid":"PR:O94500"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H+ + phosphate.","definition_xrefs":["PMID:32747782","Rhea:60148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016874","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: GO:1901812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-carotene.","definition_xrefs":["MetaCyc:PWY-5943","GOC:TermGenie","GOC:yaf","PMID:11387982","UniPathway:UPA00802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-carotene biosynthetic process","synonyms":[{"name":"beta-carotene anabolism","type":"exact"},{"name":"beta-carotene biosynthesis","type":"exact"},{"name":"beta-carotene formation","type":"exact"},{"name":"beta-carotene synthesis","type":"exact"}],"termid":"GO:1901812"}


id: FYPO:0009108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole bodies (SPBs) of daughter nuclei are misoriented during mitotic telophase. Normally, SPBs face the cell tips at the end of anaphase when the spindle disassembles, but as microtubules are nucleated from SPBs and telophase nuclear positioning proceeds, the SPBs tend to face the cell equator.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body orientation during mitotic telophase","synonyms":[{"name":"abnormal spindle pole body angle during mitotic telophase","type":"exact"},{"name":"abnormal spindle pole body positioning within the nucleus during mitotic telophase","type":"exact"},{"name":"spindle pole body facing cell tips during mitotic telophase","type":"related"}],"termid":"FYPO:0009108"}


id: GO:0140870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of RNA polymerase.","definition_xrefs":["PMID:18313387","PMID:15300239","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: SO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding phenylalanyl tRNA (SO:0000267).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine_tRNA_primary_transcript","synonyms":[{"name":"phenylalanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000224"}


id: GO:0140208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs as a result of mitochondrial fragmentation.","definition_xrefs":["PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process in response to mitochondrial fragmentation","synonyms":[{"name":"apoptosis in response to mitochondrial fragmentation","type":"exact"}],"termid":"GO:0140208"}


id: GO:0061708
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90369],"is_not":false,"summary":null,"term":"GO:0061708"}]},"cv_name":"molecular_function","definition":"Catalysis of 5-taurinomethyluridine in tRNA + a [protein]-S-sulfanylcysteine + ATP + a reduced electron acceptor = a 5-taurinomethyl-2-thiouridine in tRNA + a [protein]-L-cysteine + AMP + an oxidized electron acceptor + diphosphate + H+.","definition_xrefs":["GOC:dph","PMID:15509579","RHEA:47040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0140101","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA-5-taurinomethyluridine 2-sulfurtransferase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787447","MetaCyc:RXN-16821","EC:2.8.1.14"],"termid":"GO:0061708","terms_by_termid":{"GO:0061708":null}}


id: GO:0021669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 6. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 formation","termid":"GO:0021669"}


id: PBO:0048219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 3","termid":"PBO:0048219"}


id: PBO:0039106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Abelson helper integration site 1","termid":"PBO:0039106"}


id: GO:2000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial microparticle formation","synonyms":[{"name":"regulation of endothelial microparticle generation","type":"exact"},{"name":"regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000335"}


id: PBO:0068209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 516","termid":"PBO:0068209"}


id: GO:0099500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.","definition_xrefs":["GOC:aruk","GOC:bc","ISBN:0071120009","PMID:18618940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion to plasma membrane","termid":"GO:0099500"}


id: PR:Q09895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.08c gene.","definition_xrefs":["UniProtKB:Q09895","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.08c","synonyms":[{"name":"Spom972h-SPAC24B11.08c","type":"exact"}],"termid":"PR:Q09895"}


id: FYPO:0001398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only one end of a cell following cell division; patches may localize to either the old or the new end. A population of cells with this phenotype has a 1:1 mix of cells with actin patches at the old end and cells with patches at the new end.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to either end","synonyms":[{"name":"monopolar F-actin patch localization to either end","type":"exact"},{"name":"monopolar actin cortical patch localisation to either end","type":"exact"},{"name":"monopolar actin cortical patch localization to either end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to either end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at either end","type":"related"},{"name":"monopolar actin patch localization to either end","type":"exact"}],"termid":"FYPO:0001398"}


id: PR:Q9P6P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.05c","secondary_identifiers":["UniProtKB:Q9P6P1"],"synonyms":[{"name":"Spom972h-STX16","type":"exact"},{"name":"syntaxin tlg2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P1"}


id: PBO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_respiration","termid":"PBO:0031352"}


id: GO:0031680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The heterodimer formed by the beta and gamma subunits of a heterotrimeric G protein, which dissociates from the alpha subunit upon guanine nuclotide exchange.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein beta/gamma-subunit complex","synonyms":[{"name":"G-beta/G-gamma complex","type":"exact"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"}],"termid":"GO:0031680"}


id: PBO:0071729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 27","termid":"PBO:0071729"}


id: GO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + H2O + O2 = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-glutamate oxidase activity","secondary_identifiers":["RHEA:10028","KEGG_REACTION:R00279","MetaCyc:D-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"D-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-glutamic acid oxidase activity","type":"related"},{"name":"D-glutamic oxidase activity","type":"related"}],"termid":"GO:0047821"}


id: GO:1900294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of heptasaccharide transport","termid":"GO:1900294"}


id: PBO:0054824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2237","termid":"PBO:0054824"}


id: GO:0033847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + hydrogen sulfide = L-cysteine + phosphate.","definition_xrefs":["EC:2.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"O-phosphoserine sulfhydrylase activity","secondary_identifiers":["MetaCyc:2.5.1.65-RXN","RHEA:10252"],"synonyms":[{"name":"O-phospho-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-phosphoserine(thiol)-lyase activity","type":"related"}],"termid":"GO:0033847"}


id: FYPO:0000432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased fermentation","synonyms":[{"name":"decreased fermentation during mitotic cell cycle","type":"related"},{"name":"decreased fermentation during vegetative growth","type":"exact"},{"name":"decreased fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: decreased","type":"related"},{"name":"reduced fermentation","type":"exact"}],"termid":"FYPO:0000432"}


id: GO:0061615
data:
  {"annotated_genes":["SJAG_00027","SJAG_02135","SJAG_06622","SJAG_02369","SJAG_04192","SJAG_00605","SJAG_04495","SJAG_00461","SJAG_02009","SJAG_00839","SJAG_03828","SJAG_06621","SJAG_04334","SJAG_02945","SJAG_03903","SJAG_02796","SJAG_02107","SJAG_03373","SJAG_03660","SJAG_01310"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104995,105460,99723,105457,100533,105463,94094,101876,101512,105462,105459,104991,104990,105461,91115,94365,101511,101877,104994,101510,104993,90625,104996,99465,104992,105458,112401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a monosaccharide into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["ISBN:0879010479","GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"glycolytic process through fructose-6-phosphate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5484"],"synonyms":[{"name":"glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061615","terms_by_termid":{"GO:0061621":null}}


id: GO:0051730
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86774],"is_not":false,"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 5'-dephospho-RNA = GDP + 5'-phospho-RNA.","definition_xrefs":["PMID:8428918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051735"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GTP-dependent RNA 5'-hydroxyl-kinase activity","type":"exact"},{"name":"GTP-dependent RNA kinase activity","type":"exact"},{"name":"GTP-dependent polyribonucleotide kinase activity","type":"exact"}],"termid":"GO:0051730","terms_by_termid":{"GO:0051730":null}}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: SO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000682 splicing_feature (obsolete SO:0000682)","termid":"SO:0000682"}


id: GO:0044668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sodium(out)+ malonate(out) = sodium(in) + malonate(in).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"},{"relation_name":"is_a","term_name":"malonate(1-) transmembrane transporter activity","termid":"GO:1901239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:malonate symporter activity","secondary_identifiers":["RHEA:33135"],"termid":"GO:0044668"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_05024","SJAG_00779","SJAG_03164","SJAG_04354","SJAG_04713","SJAG_00964","SJAG_00694","SJAG_00197","SJAG_03708","SJAG_00444","SJAG_02887","SJAG_04709","SJAG_00533","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[107973,112767,94593,85586,89516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[111618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[66960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89061,110963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[111619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[89062,83624,88073,110965,84608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[102579,89519,96150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: PBO:0055351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2780","termid":"PBO:0055351"}


id: GO:0072700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bismuth","synonyms":[{"name":"response to bismuth ion","type":"exact"}],"termid":"GO:0072700"}


id: PBO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc15","termid":"PBO:0018046"}


id: PBO:0057155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302a","termid":"PBO:0057155"}


id: PBO:0055330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2758","termid":"PBO:0055330"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: MOD:01478
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into an 4'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-phenylalanine","synonyms":[{"name":"4-fluorophenylalanine","type":"exact"},{"name":"p-fluorophenylalanine","type":"exact"},{"name":"para-fluorophenylalanine","type":"exact"},{"name":"rho-fluorophenylalanine","type":"exact"}],"termid":"MOD:01478"}


id: PBO:0110106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-specific 1-phosphatidylinositol 4-kinase, type III-beta Pik1","termid":"PBO:0110106"}


id: PBO:0067702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 10","termid":"PBO:0067702"}


id: PBO:0055184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2608","termid":"PBO:0055184"}


id: GO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}


id: GO:0015531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: citrate(out) + H+(out) = citrate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"citrate secondary active transmembrane transporter activity","termid":"GO:0071913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"citrate:proton symporter activity","secondary_identifiers":["RHEA:32123"],"synonyms":[{"name":"citrate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015531"}


id: PBO:0055582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3018","termid":"PBO:0055582"}


id: PBO:0026747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_mitotic_S_phase","termid":"PBO:0026747"}


id: RO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"},{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_in","termid":"RO:0002624"}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: PBO:0040366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 3","termid":"PBO:0040366"}


id: GO:0090151
data:
  {"annotated_genes":["SJAG_02361","SJAG_01949","SJAG_03416","SJAG_01120","SJAG_01780","SJAG_04996","SJAG_02355","SJAG_03502","SJAG_04208","SJAG_01405","SJAG_02398","SJAG_01917","SJAG_05302","SJAG_00404","SJAG_01951","SJAG_02797","SJAG_01640","SJAG_02034","SJAG_00569","SJAG_03515","SJAG_02524","SJAG_05300","SJAG_00687","SJAG_03633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95512,99006,103659,112317,103359,103576,88888,103636,86521,109257,84811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[95093,96992,84947,109410,110744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[94331,107853,86501,87027,106112,103637,106462,106472,94676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the mitochondrial membrane.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00404":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01120":null,"SJAG_01405":null,"SJAG_01640":null,"SJAG_01780":null,"SJAG_01917":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03633":null,"SJAG_04208":null,"SJAG_04996":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"establishment of protein localization to mitochondrial membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation in mitochondrial membrane","type":"exact"},{"name":"establishment of protein localization in mitochondrial membrane","type":"exact"}],"termid":"GO:0090151","terms_by_termid":{"GO:0032979":null,"GO:0045039":null,"GO:0045040":null,"GO:0051204":null}}


id: PBO:0091954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf13","termid":"PBO:0091954"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: FYPO:0007721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of proteins via vesicles from late endosomes to the Golgi is abnormal. This process is normally mediated by the retromer complex.","definition_xrefs":["PMID:33788833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein recycling from late endosome to Golgi","synonyms":[{"name":"abnormal protein recycling from endosome to Golgi by retromer","type":"exact"},{"name":"abnormal protein recycling from late endosome to Golgi during mitotic cell cycle","type":"related"},{"name":"abnormal protein recycling from late endosome to Golgi during vegetative growth","type":"exact"},{"name":"abnormal retromer-mediated protein recycling from endosome to Golgi","type":"exact"}],"termid":"FYPO:0007721"}


id: PBO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine-pyridoxal-pyridoxamine kinase (predicted)","termid":"PBO:0001711"}


id: GO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol.","definition_xrefs":["EC:3.1.8.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aryldialkylphosphatase activity","secondary_identifiers":["UM-BBD_enzymeID:e0054","RHEA:18053","MetaCyc:ARYLDIALKYLPHOSPHATASE-RXN"],"synonyms":[{"name":"phosphotriesterase activity","type":"narrow"},{"name":"A-esterase activity","type":"broad"},{"name":"OPH","type":"related"},{"name":"aryltriphosphatase activity","type":"related"},{"name":"aryltriphosphate dialkylphosphohydrolase activity","type":"exact"},{"name":"esterase B1","type":"related"},{"name":"esterase E4","type":"related"},{"name":"organophosphate esterase activity","type":"broad"},{"name":"organophosphate hydrolase activity","type":"broad"},{"name":"organophosphorus acid anhydrase activity","type":"broad"},{"name":"organophosphorus hydrolase activity","type":"broad"},{"name":"paraoxon esterase activity","type":"narrow"},{"name":"paraoxon hydrolase activity","type":"broad"},{"name":"paraoxonase activity","type":"broad"},{"name":"pirimiphos-methyloxon esterase activity","type":"narrow"}],"termid":"GO:0004063"}


id: GO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + myo-inositol hexakisphosphate = phosphate + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate.","definition_xrefs":["MetaCyc:3.1.3.72-RXN","EC:3.1.3.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"5-phytase activity","secondary_identifiers":["RHEA:13001"],"synonyms":[{"name":"myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"related"}],"termid":"GO:0050533"}


id: GO:1905501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a heteroreceptor complex into its constituent components.","definition_xrefs":["PMID:24157794","GOC:TermGenie","GOC:pad","GOC:PARL","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex disassembly (obsolete GO:1905501)","termid":"GO:1905501"}


id: PBO:0076843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF2 interacting protein pseudogene 1","termid":"PBO:0076843"}


id: GO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of a pigment granule.","definition_xrefs":["PMID:11294610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"pigment granule membrane","termid":"GO:0090741"}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: FYPO:0000620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in metaphase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic metaphase","synonyms":[{"name":"abnormal cell cycle arrest in metaphase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic metaphase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest with unseparated chromosomes","type":"related"},{"name":"abnormal mitotic cell cycle arrest in metaphase","type":"exact"},{"name":"abolished mitotic metaphase/anaphase transition","type":"related"},{"name":"mitotic cell cycle progression in metaphase: arrested","type":"related"}],"termid":"FYPO:0000620"}


id: PBO:0057670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1261","termid":"PBO:0057670"}


id: GO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of histamine uptake","synonyms":[{"name":"regulation of histamine import","type":"exact"}],"termid":"GO:0051616"}


id: PATO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being entwined and difficult to unravel.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tangled","termid":"PATO:0001846"}


id: GO:0006713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"glucocorticoid metabolic process","termid":"GO:0008211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucocorticoid catabolic process","synonyms":[{"name":"glucocorticoid breakdown","type":"exact"},{"name":"glucocorticoid catabolism","type":"exact"},{"name":"glucocorticoid degradation","type":"exact"}],"termid":"GO:0006713"}


id: GO:0098891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic active zone membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of presynaptic membrane","termid":"GO:0098888"},{"relation_name":"part_of","term_name":"presynaptic active zone membrane","termid":"GO:0048787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic active zone membrane","termid":"GO:0098891"}


id: PBO:0064355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 2","termid":"PBO:0064355"}


id: PBO:0054215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1595","termid":"PBO:0054215"}


id: FYPO:0001578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on dipeptide nitrogen source","synonyms":[{"name":"normal cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"normal dipeptide utilization","type":"related"},{"name":"normal vegetative cell population growth on dipeptide nitrogen source","type":"exact"}],"termid":"FYPO:0001578"}


id: PBO:0051335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-36 (pseudogene)","termid":"PBO:0051335"}


id: GO:1903996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:nc","PMID:10518561","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"regulation of non-membrane spanning protein tyrosine kinase activity","termid":"GO:1903995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-membrane spanning protein tyrosine kinase activity","synonyms":[{"name":"down regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down regulation of janus kinase 1 activity","type":"narrow"},{"name":"down regulation of janus kinase 2 activity","type":"narrow"},{"name":"down regulation of janus kinase 3 activity","type":"narrow"},{"name":"down regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down-regulation of janus kinase 1 activity","type":"narrow"},{"name":"down-regulation of janus kinase 2 activity","type":"narrow"},{"name":"down-regulation of janus kinase 3 activity","type":"narrow"},{"name":"down-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"downregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"downregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of focal adhesion kinase activity","type":"narrow"},{"name":"downregulation of janus kinase 1 activity","type":"narrow"},{"name":"downregulation of janus kinase 2 activity","type":"narrow"},{"name":"downregulation of janus kinase 3 activity","type":"narrow"},{"name":"downregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"downregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"downregulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"inhibition of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"inhibition of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of focal adhesion kinase activity","type":"narrow"},{"name":"inhibition of janus kinase 1 activity","type":"narrow"},{"name":"inhibition of janus kinase 2 activity","type":"narrow"},{"name":"inhibition of janus kinase 3 activity","type":"narrow"},{"name":"inhibition of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"inhibition of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"negative regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of focal adhesion kinase activity","type":"narrow"},{"name":"negative regulation of janus kinase 1 activity","type":"narrow"},{"name":"negative regulation of janus kinase 2 activity","type":"narrow"},{"name":"negative regulation of janus kinase 3 activity","type":"narrow"},{"name":"negative regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"negative regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903996"}


id: MOD:01721
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01721"}


id: PBO:0085331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); controlled by the multiple drug resistance regulator Pdr1p; localizes to lipid particles and microsomes; controls levels of various lipids, may regulate lipid synthesis; homologous to Pdr17p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085331"}


id: GO:0033124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of GTP catabolic process (obsolete GO:0033124)","synonyms":[{"name":"regulation of GTP breakdown","type":"exact"},{"name":"regulation of GTP catabolism","type":"exact"},{"name":"regulation of GTP degradation","type":"exact"}],"termid":"GO:0033124"}


id: PBO:0029560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Calcofluor_White","termid":"PBO:0029560"}


id: PBO:0074866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 50B","termid":"PBO:0074866"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: PBO:0040668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brevican","termid":"PBO:0040668"}


id: GO:0046208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["PMID:12141946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine catabolic process","synonyms":[{"name":"spermine breakdown","type":"exact"},{"name":"spermine catabolism","type":"exact"},{"name":"spermine degradation","type":"exact"}],"termid":"GO:0046208"}


id: PBO:0002610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase (predicted)","termid":"PBO:0002610"}


id: PBO:0059163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercaptopyruvate sulfurtransferase","termid":"PBO:0059163"}


id: FYPO:0000058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondrial nucleoids than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondrial nucleoids present in decreased numbers","synonyms":[{"name":"decreased number of mitochondrial nucleoids","type":"exact"},{"name":"fewer mitochondrial nucleoids present","type":"exact"},{"name":"mitochondrial nucleoid decreased number","type":"exact"},{"name":"mitochondrial nucleoids present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoids present in decreased numbers during vegetative growth","type":"exact"},{"name":"mitochondrial nucleoids present in reduced numbers","type":"exact"}],"termid":"FYPO:0000058"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: FYPO:0007032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein glycosylation during vegetative growth","synonyms":[{"name":"increased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hyperglycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007032"}


id: PBO:0080886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 2","termid":"PBO:0080886"}


id: PATO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveate","synonyms":[{"name":"foveolate","type":"related"},{"name":"pitted","type":"related"}],"termid":"PATO:0002296"}


id: PBO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM186 ortholog","termid":"PBO:0017002"}


id: PBO:0005258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup61","termid":"PBO:0005258"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: GO:0048585
data:
  {"annotated_genes":["SJAG_04943","SJAG_00642","SJAG_03486","SJAG_02426","SJAG_02858","SJAG_00975","SJAG_03355","SJAG_04825","SJAG_02379","SJAG_00209","SJAG_03799","SJAG_04551","SJAG_01386","SJAG_01114","SJAG_01245","SJAG_00573","SJAG_04455","SJAG_00883","SJAG_02451","SJAG_02013","SJAG_03678","SJAG_00526","SJAG_04910","SJAG_04206","SJAG_04522","SJAG_03681","SJAG_02514","SJAG_00169","SJAG_02765","SJAG_02169","SJAG_00424","SJAG_03893","SJAG_05346","SJAG_01184","SJAG_05000","SJAG_03353","SJAG_01790","SJAG_04249","SJAG_02336","SJAG_01253","SJAG_01983","SJAG_02000","SJAG_00990","SJAG_01142","SJAG_02481","SJAG_03263","SJAG_03501","SJAG_03508","SJAG_03720","SJAG_02233","SJAG_02311","SJAG_00610","SJAG_03072","SJAG_00229","SJAG_00875","SJAG_01679","SJAG_01297","SJAG_03185","SJAG_03048","SJAG_03089","SJAG_03126","SJAG_04259","SJAG_00991","SJAG_02392","SJAG_00457","SJAG_00293","SJAG_00266","SJAG_06270","SJAG_00824","SJAG_02231","SJAG_00289","SJAG_03592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95668,110323,108017,104318,86847,103296,111948,99971,109845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[112432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[104035,112433,88849,88192,96518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[97070,112180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[91953,95524,103109,99884,103678,114319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[98447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[85573,98223,98924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[84364,103198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[90300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[87763,91136,114320,92077,95526,113113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[103199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[89417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[107420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[106237,88939,91747,95669,97350,89021,86851,89561,87832,101091,103298,103608,111951,95749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[101950,107770,87348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[87371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[90273,107018,112285,94963,97525,99092,95652,101185,89423,103464,110041,84182,112532,109219,105330,114233,92201,112181,113081,105744,110628,103212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to a stimulus. 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id: PBO:0079068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-2","termid":"PBO:0079068"}


id: GO:0031947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid metabolic process","termid":"GO:0031944"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of glucocorticoid biosynthetic process","synonyms":[{"name":"down regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"down-regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"downregulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"inhibition of glucocorticoid biosynthetic process","type":"narrow"}],"termid":"GO:0031947"}


id: PBO:0065264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR23 family member E2, pseudogene","termid":"PBO:0065264"}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: GO:1901847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nicotinate metabolic process","synonyms":[{"name":"nicotinate metabolism","type":"exact"}],"termid":"GO:1901847"}


id: GO:0097643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with amylin to initiate a change in cell activity.","definition_xrefs":["PMID:18687416","PMID:10871296","GOC:bhm","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"amylin receptor activity","termid":"GO:0097643"}


id: PR:O13753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit d 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11028:SF0","OMA:SCHPO01483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit d (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.03c","secondary_identifiers":["UniProtKB:O13753"],"synonyms":[{"name":"Spom972h-ATP6V0D1","type":"exact"},{"name":"V-ATPase 39 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit M39 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit d (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit d (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13753"}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: GO:0043173
data:
  {"annotated_genes":["SJAG_04713","SJAG_01070","SJAG_03708","SJAG_04354","SJAG_03298","SJAG_06634","SJAG_01859","SJAG_00533","SJAG_04467","SJAG_04123","SJAG_04709","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89637,112883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[89061,110963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[89857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[89859,97891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[85163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[105689,85164,86779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[83624,110965,89062,88073,84608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03298":null,"SJAG_03708":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04467":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nucleotide_salvage"],"termid":"GO:0043173","terms_by_termid":{"GO:0019358":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0044206":null,"GO:0044209":null,"GO:0044211":null}}


id: PBO:0034184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends_with","termid":"PBO:0034184"}


id: GO:0015333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: peptide(out) + H+(out) = peptide(in) + H+(in), up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by hydrogen ion movement.","definition_xrefs":["GOC:mtg_transport","TC:2.A.17.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"peptide:proton symporter activity","secondary_identifiers":["Reactome:R-HSA-428007","Reactome:R-HSA-427998"],"synonyms":[{"name":"peptide:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015333"}


id: GO:0098806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An RNA interference pathway in which a miRNA binding to mRNA triggers shortening of the poly(A) tail of a nuclear-transcribed mRNA, resulting in destabilization of the mRNA and a reduction the amount of translated transcript.","definition_xrefs":["GOC:BHF","PMID:23209154","GOC:dos","PMID:21118121"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated gene silencing by mRNA deadenylation (obsolete GO:0098806)","synonyms":[{"name":"deadenylation involved in gene silencing by miRNA","type":"exact"},{"name":"mRNA deadenylation-mediated gene silencing by miRNA","type":"exact"}],"termid":"GO:0098806"}


id: PBO:0072117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 6","termid":"PBO:0072117"}


id: PBO:0059747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 21","termid":"PBO:0059747"}


id: PBO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 47","termid":"PBO:0045857"}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: PBO:0090259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable element related protein","termid":"PBO:0090259"}


id: PBO:0063474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 3 pseudogene 1","termid":"PBO:0063474"}


id: PBO:0064105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"praja ring finger ubiquitin ligase 1","termid":"PBO:0064105"}


id: PBO:0074761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 120","termid":"PBO:0074761"}


id: GO:0034429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the optic tectum towards target cells in the premotor reticulospinal system in the hindbrain.","definition_xrefs":["PMID:8038988","PMID:15065115","PMID:17507550","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tectobulbar tract morphogenesis","termid":"GO:0034429"}


id: GO:0099033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic recycling endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic recycling endosome membrane (obsolete GO:0099033)","termid":"GO:0099033"}


id: PBO:0044980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 33","termid":"PBO:0044980"}


id: GO:1903077
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91956],"is_not":false,"summary":null,"term":"GO:1903077"},{"annotations":[84249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11602640","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell periphery","termid":"GO:1904376"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090005","GO:1905964"],"synonyms":[{"name":"down regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down regulation of protein localization in plasma membrane","type":"exact"},{"name":"down regulation of protein localization to plasma membrane","type":"exact"},{"name":"down regulation of protein targeting to plasma membrane","type":"related"},{"name":"down regulation of protein-plasma membrane targeting","type":"related"},{"name":"down-regulation of protein localisation in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization in plasma membrane","type":"exact"},{"name":"down-regulation of protein localization to plasma membrane","type":"exact"},{"name":"down-regulation of protein targeting to plasma membrane","type":"related"},{"name":"down-regulation of protein-plasma membrane targeting","type":"related"},{"name":"downregulation of protein localisation in plasma membrane","type":"exact"},{"name":"downregulation of protein localization in plasma membrane","type":"exact"},{"name":"downregulation of protein localization to plasma membrane","type":"exact"},{"name":"downregulation of protein targeting to plasma membrane","type":"related"},{"name":"downregulation of protein-plasma membrane targeting","type":"related"},{"name":"inhibition of protein localisation in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization in plasma membrane","type":"narrow"},{"name":"inhibition of protein localization to plasma membrane","type":"narrow"},{"name":"inhibition of protein targeting to plasma membrane","type":"narrow"},{"name":"inhibition of protein-plasma membrane targeting","type":"narrow"},{"name":"negative regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"negative regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"negative regulation of protein localisation in plasma membrane","type":"related"},{"name":"negative regulation of protein localization in plasma membrane","type":"exact"},{"name":"negative regulation of protein targeting to plasma membrane","type":"related"},{"name":"negative regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903077","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: MOD:01549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01549"}


id: PBO:0029042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029042"}


id: GO:0060134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a startle magnitude is reduced when the startling stimulus is preceded by a low-intensity prepulse.","definition_xrefs":["PMID:10341260","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"part_of","term_name":"startle response","termid":"GO:0001964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prepulse inhibition","secondary_identifiers":["Wikipedia:Prepulse_inhibition"],"synonyms":[{"name":"PPI","type":"related"},{"name":"pre-pulse inhibition","type":"exact"}],"termid":"GO:0060134"}


id: GO:0030950
data:
  {"annotated_genes":["SJAG_02392","SJAG_00152","SJAG_00030","SJAG_00661","SJAG_04461","SJAG_02838","SJAG_00424","SJAG_03748"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84624,85572,91950,95406,96251,100709,101409,106826],"is_not":false,"summary":null,"term":"GO:0030950"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00661":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03748":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007163","GO:0030036"],"is_obsolete":false,"name":"establishment or maintenance of actin cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030950","terms_by_termid":{"GO:0030950":null}}


id: PBO:0089911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 ATPase subunit","termid":"PBO:0089911"}


id: PBO:0058020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3945 host gene","termid":"PBO:0058020"}


id: GO:1903436
data:
  {"annotated_genes":["SJAG_01114","SJAG_04776","SJAG_00514","SJAG_03704","SJAG_03342","SJAG_04666","SJAG_03309","SJAG_02838","SJAG_01188","SJAG_00256","SJAG_02392","SJAG_03631","SJAG_00845","SJAG_03048","SJAG_00082","SJAG_03581","SJAG_01787","SJAG_02592","SJAG_04597","SJAG_03936","SJAG_04468","SJAG_05290","SJAG_01805","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[86130,90512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[90513,109423,106587,83693,90681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[99782,86893,91957,106830,115307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[102439,86002,109424,101233,111512,88520,89907,113910,103110,85378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[88521,90516,83694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[90478,89913,115477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[97462,107432,84016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinetic process","termid":"GO:0032954"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00256":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:1903436","terms_by_termid":{"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null}}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PMID:31601154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: PBO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170 pseudogene 1","termid":"PBO:0042793"}


id: PR:O59716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B8.8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.08","synonyms":[{"name":"Spom972h-SPBC3B8.08","type":"exact"}],"termid":"PR:O59716"}


id: GO:0140125
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96753],"is_not":false,"summary":null,"term":"GO:0140125"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transmembrane transport","termid":"GO:0071934"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"thiamine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140125","terms_by_termid":{"GO:0140125":null}}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: GO:0004149
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108129],"is_not":false,"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide.","definition_xrefs":["EC:2.3.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-succinyltransferase activity","termid":"GO:0016751"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue succinyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9853512","RHEA:15213"],"synonyms":[{"name":"dihydrolipoamide S-succinyltransferase activity","type":"exact"},{"name":"dihydrolipoamide succinyltransferase activity","type":"related"},{"name":"dihydrolipoic transsuccinylase activity","type":"related"},{"name":"dihydrolipolyl transsuccinylase activity","type":"related"},{"name":"dihydrolipoyl transsuccinylase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:succinyl-CoA S-succinyltransferase activity","type":"related"},{"name":"lipoate succinyltransferase (Escherichia coli) activity","type":"related"},{"name":"lipoate succinyltransferase activity","type":"related"},{"name":"lipoic transsuccinylase activity","type":"related"},{"name":"lipoyl transsuccinylase activity","type":"related"},{"name":"succinyl-CoA:dihydrolipoamide S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:dihydrolipoate S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:enzyme-6-N-(dihydrolipoyl)lysine S-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:enzyme-N6-(dihydrolipoyl)lysine S-succinyltransferase activity","type":"related"}],"termid":"GO:0004149","terms_by_termid":{"GO:0004149":null}}


id: GO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of blood mast cell degranulation in another organism. Mast cell degranulation is the regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["GOC:fj","GOC:bf","PMID:21549739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"modulation of mast cell degranulation in another organism","synonyms":[{"name":"modulation of mast cell degranulation in other organism","type":"exact"},{"name":"regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035895"}


id: GO:0043903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biological process involved in symbiotic interaction","synonyms":[{"name":"regulation of interspecies interactions between organisms","type":"broad"},{"name":"regulation of symbiosis, encompassing mutualism through parasitism","type":"related"},{"name":"regulation of symbiotic process","type":"exact"}],"termid":"GO:0043903"}


id: PBO:0069042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 287, pseudogene","termid":"PBO:0069042"}


id: GO:0141132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a host that act to protect or prevent damage to the symbiont.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to host","secondary_identifiers":["GO:0052348","GO:0052369","GO:0052264"],"termid":"GO:0141132"}


id: GO:0098610
data:
  {"annotated_genes":["SJAG_03484","SJAG_02380","SJAG_03802","SJAG_03473","SJAG_04191","SJAG_01975","SJAG_04720","SJAG_00910","SJAG_01253","SJAG_00239","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112007,88596,96884,112006,96883,88597,98798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[99633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[102310,99634],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[107430,104821,110142,104698,112195,101951],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of two unicellular organisms to each other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"adhesion between unicellular organisms","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098741"],"synonyms":[{"name":"adhesion between unicellular organisms via cell-wall interaction","type":"narrow"},{"name":"multi-organismal cell-cell adhesion","type":"broad"}],"termid":"GO:0098610","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: PBO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDR kinase Sid2","termid":"PBO:0000216"}


id: PATO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire population or part of a population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population quality","termid":"PATO:0002003"}


id: PBO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin I","termid":"PBO:0042206"}


id: PBO:0076534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 60","termid":"PBO:0076534"}


id: CHEBI:57643
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-diacyl-sn-glycero-3-phosphocholine","termid":"CHEBI:57643"}


id: PBO:0086966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit A of the heterotrimeric PP2A complex; the heterotrimeric protein phosphatase 2A (PP2A) complex also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III","termid":"PBO:0086966"}


id: GO:0075080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075080)","termid":"GO:0075080"}


id: PBO:0074318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 7","termid":"PBO:0074318"}


id: GO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine) or peptidyl-3'-(phospho-5'-uridine)-L-histidine (otherwise known as pi-UMP-histidine, pros-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein uridylylation","termid":"GO:0018177"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}


id: FYPO:0003524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal at one or both cell tips.","definition_xrefs":["GO:0030036","PomBase:mah","PMID:24954052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization at cell tip","synonyms":[{"name":"abnormal actin cytoskeleton organisation at cell tip","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell end","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton organization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003524"}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: GO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinoid metabolic process","synonyms":[{"name":"retinoid metabolism","type":"exact"}],"termid":"GO:0001523"}


id: PBO:0041774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 13","termid":"PBO:0041774"}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: FYPO:0002929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of abnormal length.","definition_xrefs":["PMID:24081329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal poly(A) tail length","synonyms":[{"name":"abnormal polyA sequence length","type":"exact"},{"name":"abnormal polyA tail length","type":"exact"}],"termid":"FYPO:0002929"}


id: GO:0019144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-sugar + H2O = AMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ADP-sugar diphosphatase activity","secondary_identifiers":["MetaCyc:ADPSUGPPHOSPHAT-RXN"],"synonyms":[{"name":"ADP-sugar pyrophosphatase activity","type":"related"},{"name":"ADP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"ADPsugar pyrophosphatase activity","type":"related"},{"name":"adenosine diphosphosugar pyrophosphatase activity","type":"related"},{"name":"nucleoside diphosphate-sugar hydrolase activity","type":"broad"}],"termid":"GO:0019144"}


id: GO:1904261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23940118","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix assembly","termid":"GO:1901203"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"positively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"activation of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"},{"name":"up regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"up-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"upregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"}],"termid":"GO:1904261"}


id: PBO:0083242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; expression induced by iron-regulated transcriptional activator Aft2p","termid":"PBO:0083242"}


id: GO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage condensation","termid":"GO:0001502"}


id: PBO:0061654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUFIP1 pseudogene 1","termid":"PBO:0061654"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: GO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"positively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"positive regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"positive regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080038"}


id: GO:0005685
data:
  {"annotated_genes":["SJAG_03983","SJAG_00058","SJAG_04214","SJAG_02843","SJAG_04911","SJAG_04163","SJAG_01440","SJAG_00474","SJAG_03469","SJAG_02304","SJAG_00147","SJAG_01654","SJAG_01870","SJAG_02279","SJAG_01015","SJAG_05009","SJAG_01301"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87665,90105,91022,91277,91706,93932,98620,98786,101926,103002,106127,106690,106709,106719,108424,109334,111294],"is_not":false,"summary":null,"term":"GO:0005685"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U1, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U1 snRNP, most of which remain associated with the U1 snRNA both while the U1 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00474":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U1 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U1","type":"exact"}],"termid":"GO:0005685","terms_by_termid":{"GO:0005685":null}}


id: PBO:0066524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGP1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066524"}


id: FYPO:0003162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to salt stress. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to salt stress","termid":"FYPO:0002304"},{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to salt stress","synonyms":[{"name":"RNA absent from cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"transcripts absent from cell during cellular response to salt stress","type":"exact"},{"name":"undetectable RNA level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003162"}


id: GO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomannan(n) + GDP-mannose = phosphomannan(n+1) + GMP.","definition_xrefs":["EC:2.7.8.9","MetaCyc:2.7.8.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"phosphomannan mannosephosphotransferase activity","synonyms":[{"name":"GDP-mannose:phosphomannan mannose phosphotransferase activity","type":"related"}],"termid":"GO:0047361"}


id: GO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 7,8-dihydroneopterin 3'-triphosphate.","definition_xrefs":["GOC:yaf","UniPathway:UPA00848"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroneopterin 3'-triphosphate biosynthetic process (obsolete GO:0035998)","synonyms":[{"name":"7,8-dihydroneopterin 3'-triphosphate anabolism","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate biosynthesis","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate formation","type":"exact"},{"name":"7,8-dihydroneopterin 3'-triphosphate synthesis","type":"exact"}],"termid":"GO:0035998"}


id: PBO:0058471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5579","termid":"PBO:0058471"}


id: PBO:0066589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member C","termid":"PBO:0066589"}


id: GO:1903170
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109422,87327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:rl","PMID:24125847","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium ion membrane transport","type":"exact"},{"name":"down regulation of calcium ion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane calcium transport","type":"exact"},{"name":"down-regulation of calcium ion membrane transport","type":"exact"},{"name":"down-regulation of calcium ion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane calcium transport","type":"exact"},{"name":"downregulation of calcium ion membrane transport","type":"exact"},{"name":"downregulation of calcium ion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane calcium transport","type":"exact"},{"name":"inhibition of calcium ion membrane transport","type":"narrow"},{"name":"inhibition of calcium ion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane calcium transport","type":"narrow"},{"name":"negative regulation of calcium ion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1903170","terms_by_termid":{"GO:1905949":null}}


id: GO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP611 chromophore cross-link from the alpha-carboxyl carbon of residue n, a methionine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like fluorescent chromoprotein from the sea anemone Entacmaea quadricolor.","definition_xrefs":["PMID:15542608","RESID:AA0379","PMID:12909624","PMID:10852900","PMID:12185250","PDB:1UIS","PDB:1XQM"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine (obsolete GO:0051359)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051359"}


id: PBO:0081941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 6","termid":"PBO:0081941"}


id: PBO:0110168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1 co-chaperone for EF-1 alpha folding","termid":"PBO:0110168"}


id: PBO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo84 (predicted)","termid":"PBO:0000907"}


id: GO:0075001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an infection structure of the symbiont to its host via adhesion molecules, general stickiness etc., either directly or indirectly. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont infection structure to host","synonyms":[{"name":"adhesion of symbiont infection structure to host during symbiotic interaction","type":"exact"},{"name":"attachment of symbiont infection structure to host","type":"exact"}],"termid":"GO:0075001"}


id: FYPO:0006219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is cell population growth is normal (i.e. indistinguishable from wild type) under conditions of potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal cell population growth during potassium ion starvation","synonyms":[{"name":"normal cell population growth during potassium ion depletion","type":"exact"},{"name":"normal cell population growth during potassium ion deprivation","type":"exact"},{"name":"normal cell population growth during potassium starvation","type":"exact"},{"name":"normal cell population growth in response to potassium ion starvation","type":"exact"},{"name":"normal vegetative cell population growth during potassium ion starvation","type":"exact"}],"termid":"FYPO:0006219"}


id: GO:1900305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of laminaritriose transport","termid":"GO:1900303"},{"relation_name":"positively_regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of laminaritriose transport","synonyms":[{"name":"activation of laminaritriose transport","type":"narrow"},{"name":"up regulation of laminaritriose transport","type":"exact"},{"name":"up-regulation of laminaritriose transport","type":"exact"},{"name":"upregulation of laminaritriose transport","type":"exact"}],"termid":"GO:1900305"}


id: PBO:0059559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1C, pseudogene","termid":"PBO:0059559"}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: PBO:0072839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 like","termid":"PBO:0072839"}


id: GO:0005654
data:
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id: PBO:0089126
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id: GO:0048928
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id: GO:0019467
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id: GO:0071267
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id: PBO:0067177
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id: PBO:0085693
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id: CHEBI:48958
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id: GO:0033335
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id: PBO:0012590
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id: PBO:0073270
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id: GO:1904997
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id: PBO:0060937
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id: FYECO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing pyruvate, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate MM","synonyms":[{"name":"pyruvate minimal medium","type":"exact"}],"termid":"FYECO:0000376"}


id: FYPO:0006136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2,3-butanediol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 2,3-butanediol level","synonyms":[{"name":"increased 2,3-butanediol accumulation","type":"related"},{"name":"increased cellular 2,3-butanediol level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2,3-butanediol level during vegetative growth","type":"exact"},{"name":"increased cellular butane-2,3-diol level","type":"exact"}],"termid":"FYPO:0006136"}


id: FYPO:0001769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased tRNA-Asp C38 methylation","synonyms":[{"name":"increased tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"increased tRNA-Asp methylation on C38","type":"exact"}],"termid":"FYPO:0001769"}


id: PBO:0068325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 26","termid":"PBO:0068325"}


id: PBO:0089787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-patch domain, PINX1 family Pxr1","termid":"PBO:0089787"}


id: PBO:0077693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 1","termid":"PBO:0077693"}


id: PBO:0071099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 101","termid":"PBO:0071099"}


id: PBO:0003662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RITS complex subunit 3","termid":"PBO:0003662"}


id: GO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3d product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C3d binding","termid":"GO:0001854"}


id: PBO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8C","termid":"PBO:0043759"}


id: PBO:0043798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 1","termid":"PBO:0043798"}


id: PBO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex histone acetyltransferase catalytic subunit Gcn5","termid":"PBO:0002782"}


id: RO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"},{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotically_interacts_with","termid":"RO:0002437"}


id: PBO:0062050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 2 pseudogene","termid":"PBO:0062050"}


id: GO:1905103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the lysosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","GOC:bf","PMID:26134396","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of lysosomal membrane (obsolete GO:1905103)","synonyms":[{"name":"integral component of lysosome membrane","type":"exact"},{"name":"integral to lysosomal membrane","type":"narrow"}],"termid":"GO:1905103"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PBO:0066816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 115","termid":"PBO:0066816"}


id: _global:acts_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004032"],"termid":"_global:acts_upstream_of_or_within,_positive_effect"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: GO:0075158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075158)","synonyms":[{"name":"negative regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"negative regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075158"}


id: PBO:0034673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_break-induced_loss_of_heterozygosity_via_chromosomal_translocation","termid":"PBO:0034673"}


id: PBO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 43","termid":"PBO:0052675"}


id: PBO:0055376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2805","termid":"PBO:0055376"}


id: GO:0009073
data:
  {"annotated_genes":["SJAG_02400","SJAG_03485","SJAG_02505","SJAG_00518","SJAG_00248","SJAG_01346","SJAG_00337","SJAG_01455","SJAG_03167","SJAG_03312","SJAG_03580","SJAG_03055","SJAG_03775","SJAG_04747","SJAG_00224","SJAG_01137","SJAG_05007","SJAG_04652","SJAG_00592","SJAG_03124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87214,90689,97330,110148],"is_not":false,"summary":null,"term":"GO:0009073"},{"annotations":[90850,111065,103928,102998,98385,106476,100897,93141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[85969,104673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[110710,99578,100456,87677,93142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[94445,110856,85970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00248":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02400":null,"SJAG_02505":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_03775":null,"SJAG_04652":null,"SJAG_04747":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid family biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:COMPLETE-ARO-PWY","GO:0016089"],"synonyms":[{"name":"aromatic amino acid family anabolism","type":"exact"},{"name":"aromatic amino acid family biosynthesis","type":"exact"},{"name":"aromatic amino acid family biosynthetic process, shikimate pathway","type":"related"},{"name":"aromatic amino acid family formation","type":"exact"},{"name":"aromatic amino acid family synthesis","type":"exact"}],"termid":"GO:0009073","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006571":null,"GO:0009073":null,"GO:0009094":null}}


id: PBO:0027366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_actin_cortical_patches","termid":"PBO:0027366"}


id: PBO:0062246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BM member 1 pseudogene","termid":"PBO:0062246"}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: GO:0030337
data:
  {"annotated_genes":["SJAG_01823","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100308,111452],"is_not":false,"summary":null,"term":"GO:0030337"}]},"cv_name":"molecular_function","definition":"An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.","definition_xrefs":["PMID:8087839","GOC:mah","PMID:7903401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"DNA polymerase processivity factor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"processivity clamp","type":"exact"},{"name":"sliding clamp","type":"narrow"}],"termid":"GO:0030337","terms_by_termid":{"GO:0030337":null}}


id: PBO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3 (predicted)","termid":"PBO:0000704"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["PMID:11157771","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0044085"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:PARL","GOC:pad","GOC:TermGenie","PMID:18644871","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0030163","GO:0065003","GO:0044085","GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: PBO:0077032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 1","termid":"PBO:0077032"}


id: GO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compact cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular compact myocardium morphogenesis","termid":"GO:0003223"}


id: GO:0140076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipoprotein transport.","definition_xrefs":["GOC:RPH","GOC:BHF","GOC:BHF_miRNA","PMID:26501192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"negatively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein transport","termid":"GO:0140076"}


id: PBO:0080858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog A, membrane trafficking protein","termid":"PBO:0080858"}


id: PBO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 17","termid":"PBO:0070518"}


id: SO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases the level of mature, spliced and processed RNA with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"level_of_transcript_variant","termid":"SO:0001540"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_level_variant","synonyms":[{"name":"decreased transcript level","type":"exact"}],"termid":"SO:0001541"}


id: GO:0014823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to activity","synonyms":[{"name":"response to exercise","type":"related"}],"termid":"GO:0014823"}


id: GO:0038173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17A binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-17A-mediated signaling pathway","synonyms":[{"name":"IL-17A-mediated signaling pathway","type":"exact"},{"name":"IL17A signaling pathway","type":"exact"},{"name":"interleukin-17A signaling pathway","type":"related"},{"name":"interleukin-17A-mediated signalling pathway","type":"exact"}],"termid":"GO:0038173"}


id: GO:0052735
data:
  {"annotated_genes":["SJAG_04453","SJAG_00499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102830,106225],"is_not":false,"summary":null,"term":"GO:0052735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = an N3-methylcytidine in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA (cytidine-3-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine 3)-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine 3-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"transfer ribonucleate cytosine 3-methyltransferase activity","type":"exact"}],"termid":"GO:0052735","terms_by_termid":{"GO:0052735":null}}


id: PR:O14340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2F12.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein homolog C2F12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.05c","synonyms":[{"name":"Spom972h-SPBC2F12.05c","type":"exact"}],"termid":"PR:O14340"}


id: FYPO:0000227
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype observed in the vegetative growth phase of the life cycle in which one or more chromosome or minichromosome is not correctly segregated to either daughter cells during mitosis.","definition_xrefs":["PomBase:mah","PMID:11809834","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"chromosome loss during mitotic chromosome segregation","synonyms":[{"name":"chromosome loss during mitotic sister chromatid segregation","type":"exact"},{"name":"chromosome loss during segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome loss","type":"exact"}],"termid":"FYPO:0000227"}


id: PBO:0058046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4267","termid":"PBO:0058046"}


id: GO:1902090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23488861","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of fumagillin biosynthetic process","synonyms":[{"name":"regulation of fumagillin anabolism","type":"exact"},{"name":"regulation of fumagillin biosynthesis","type":"exact"},{"name":"regulation of fumagillin formation","type":"exact"},{"name":"regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902090"}


id: PBO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp2","termid":"PBO:0005698"}


id: GO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a neuron. The pathway is induced in response to a stimulus indicating endoplasmic reticulum (ER) stress, and ends when the execution phase of apoptosis is triggered. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.","definition_xrefs":["PMID:21113145","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"},{"relation_name":"part_of","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","synonyms":[{"name":"ER stress-induced neuron apoptosis","type":"broad"},{"name":"ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"endoplasmic reticulum stress-induced neuron apoptosis","type":"broad"},{"name":"endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036483"}


id: PBO:0088045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p; functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity","termid":"PBO:0088045"}


id: GO:1990425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.","definition_xrefs":["PMID:22822064","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"ryanodine receptor complex","synonyms":[{"name":"RyR","type":"related"}],"termid":"GO:1990425"}


id: GO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration involved in intussusceptive angiogenesis","termid":"GO:0002044"}


id: GO:1990358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multifunctional supermolecular complex, containing several proteins with hemicellulase activity. Functions to hydrolyze hemicellulose.","definition_xrefs":["PMID:16769147","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"xylanosome","synonyms":[{"name":"xylanolytic complex","type":"exact"}],"termid":"GO:1990358"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0077183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 7","termid":"PBO:0077183"}


id: GO:1901136
data:
  {"annotated_genes":["SJAG_03771","SJAG_04495","SJAG_04192","SJAG_00957","SJAG_03373","SJAG_03828","SJAG_00409","SJAG_02481","SJAG_00685","SJAG_02959","SJAG_04870","SJAG_02009","SJAG_06622","SJAG_04487","SJAG_00633","SJAG_03032","SJAG_01310","SJAG_01858","SJAG_02107","SJAG_02247","SJAG_02796","SJAG_02580","SJAG_01012","SJAG_00620","SJAG_02369","SJAG_04334","SJAG_04048","SJAG_03903","SJAG_00461","SJAG_03660","SJAG_03852","SJAG_05314","SJAG_02945","SJAG_00839","SJAG_03013","SJAG_02135","SJAG_01673","SJAG_01359","SJAG_04927","SJAG_03676","SJAG_00605","SJAG_06621","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[83742,83743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[97587,87871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[112431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[104994,99723,105457,99465,104993,101510,101877,104991,105458,105459,105463,101876,94365,94094,105461,112401,91115,104995,104990,104992,104996,90625,101512,105460,100533,101511,105462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[104440,85335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[95073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[102557,90082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"},{"annotations":[100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94283,107634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75029,71993],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[87188,108232,86780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[89647,91816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[110022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00620":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_01858":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02580":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02959":null,"SJAG_03013":null,"SJAG_03032":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03771":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04927":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate derivative catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative breakdown","type":"exact"},{"name":"carbohydrate derivative catabolism","type":"exact"},{"name":"carbohydrate derivative degradation","type":"exact"}],"termid":"GO:1901136","terms_by_termid":{"GO:0006096":null,"GO:0006152":null,"GO:0006154":null,"GO:0006198":null,"GO:0006256":null,"GO:0009972":null,"GO:0015938":null,"GO:0034232":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0046135":null,"GO:0046168":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0097466":null,"GO:1901911":null}}


id: GO:0039684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A rolling circle viral DNA replication that begins with a single-stranded viral DNA genome.","definition_xrefs":["VZ:1941","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rolling circle viral DNA replication","termid":"GO:0039682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"rolling circle single-stranded viral DNA replication","synonyms":[{"name":"ssDNA rolling circle replication","type":"exact"}],"termid":"GO:0039684"}


id: PBO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 5","termid":"PBO:0046706"}


id: GO:0072217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of metanephros development. Metanephros development is the process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"negatively_regulates","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephros development","termid":"GO:0072217"}


id: PBO:0027963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027963"}


id: FYPO:0002291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002291)","synonyms":[{"name":"normal protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0002291"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: SO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the first two or last two bases of an intron, or the 5th base from the start of the intron in the orientation of the transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site_variant","secondary_identifiers":["http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"VAT:spliceOverlap","type":"exact"},{"name":"essential_splice_site","type":"exact"},{"name":"splice site variant","type":"exact"}],"termid":"SO:0001629"}


id: PBO:0086170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for synthesis of diphthamide; required along with Dph1p, Kti11p, Jjj3p, and Dph5p; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); forms a complex with Dph1p that catalyzes the first step of diphthamide biosynthesis","termid":"PBO:0086170"}


id: PBO:0063549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEDS1-UBE2V1 readthrough","termid":"PBO:0063549"}


id: PBO:0056100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 5","termid":"PBO:0056100"}


id: SO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is polycistronic.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000477 polycistronic_gene (obsolete SO:0000477)","termid":"SO:0000477"}


id: GO:0070258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane structure formed of two closely aligned lipid bilayers that lie beneath the plasma membrane and form part of the pellicle surrounding an apicomplexan parasite cell.","definition_xrefs":["PMID:12456714","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inner membrane pellicle complex","synonyms":[{"name":"inner membrane complex","type":"broad"}],"termid":"GO:0070258"}


id: PBO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 2 pseudogene 1","termid":"PBO:0052488"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: GO:1903877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 21-deoxycortisol.","definition_xrefs":["GO_REF:0000067","PMID:10802282","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"21-deoxycortisol binding","termid":"GO:1903877"}


id: GO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + vanillin = 2 H+ + NADH + vanillate.","definition_xrefs":["EC:1.2.1.67","RHEA:13309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vanillin dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05699","MetaCyc:1.2.1.67-RXN"],"synonyms":[{"name":"vanillin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050608"}


id: GO:1905131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carcinine from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","GOC:dph","PMID:26653853","GOC:TermGenie","PMID:26713872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carcinine transmembrane transporter activity","termid":"GO:1905131"}


id: PBO:0076028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 25","termid":"PBO:0076028"}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: GO:2000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000717"}


id: GO:0043756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide + H2O = (R)-1-aminopropan-2-ol + adenosylcobyrate.","definition_xrefs":["RHEA:23504","EC:3.5.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"adenosylcobinamide hydrolase activity","secondary_identifiers":["KEGG_REACTION:R05226","MetaCyc:R346-RXN"],"synonyms":[{"name":"AdoCbi amidohydrolase activity","type":"related"},{"name":"AdoCbi hydrolase activity","type":"related"},{"name":"CbiZ","type":"related"},{"name":"adenosylcobinamide amidohydrolase activity","type":"related"}],"termid":"GO:0043756"}


id: GO:1901292
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334","SJAG_05314","SJAG_02796","SJAG_01974","SJAG_01310","SJAG_00633","SJAG_02009","SJAG_00839","SJAG_01055","SJAG_04169","SJAG_04048","SJAG_02247","SJAG_03852","SJAG_00685","SJAG_01595","SJAG_00605","SJAG_00027","SJAG_02369","SJAG_04487","SJAG_03977","SJAG_03676","SJAG_04870","SJAG_06621","SJAG_02481","SJAG_02135","SJAG_03373","SJAG_03797","SJAG_06622","SJAG_04939","SJAG_03091","SJAG_03828","SJAG_03903","SJAG_04192","SJAG_02945","SJAG_02107","SJAG_00461","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[112431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[105463,91115,94094,99465,105460,112401,99723,101510,104992,104990,104994,104993,104996,100533,90625,94365,101511,104991,104995,105457,105462,101512,105458,105459,105461,101876,101877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[112153,113205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"},{"annotations":[114611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[84863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[107504,113122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[95073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94283,107634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[101167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[101169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[75029,71993],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[96407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[109371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[110022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside phosphate.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"},{"relation_name":"is_a","term_name":"nucleobase-containing compound catabolic process","termid":"GO:0034655"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01055":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_01974":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03797":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside phosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside phosphate breakdown","type":"exact"},{"name":"nucleoside phosphate catabolism","type":"exact"},{"name":"nucleoside phosphate degradation","type":"exact"}],"termid":"GO:1901292","terms_by_termid":{"GO:0006096":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0009134":null,"GO:0009159":null,"GO:0009191":null,"GO:0009204":null,"GO:0015938":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: PBO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ctf18 RFC-like complex subunit Dcc1","termid":"PBO:0000348"}


id: PBO:0005794
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis","termid":"PBO:0005794"}


id: GO:0051618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"positively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of histamine uptake","synonyms":[{"name":"activation of histamine uptake","type":"narrow"},{"name":"positive regulation of histamine import","type":"exact"},{"name":"stimulation of histamine uptake","type":"narrow"},{"name":"up regulation of histamine uptake","type":"exact"},{"name":"up-regulation of histamine uptake","type":"exact"},{"name":"upregulation of histamine uptake","type":"exact"}],"termid":"GO:0051618"}


id: GO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-nitrophenol + 2 H+ + 2 NADPH + O2 = catechol + H2O + 2 NADP+ + nitrite.","definition_xrefs":["EC:1.14.13.31","RHEA:19457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-nitrophenol 2-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1494","KEGG_REACTION:R00828","MetaCyc:2-NITROPHENOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"2-nitrophenol oxygenase activity","type":"related"},{"name":"2-nitrophenol,NADPH:oxygen 2-oxidoreductase (2-hydroxylating, nitrite-forming)","type":"related"},{"name":"nitrophenol oxygenase activity","type":"broad"}],"termid":"GO:0047549"}


id: GO:1990621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ESCRT complex that has AAA-ATPase activity and is involved in ESCRT-mediated intralumenal vesicle formation and the final stages of cytokinesis. The complex catalyzes disassembly of the ESCRT III filament around the neck of the budding vesicle in an ATP-driven reaction, resulting in membrane scission and recycling of the ESCRT III components back to the cytosol. In yeast, it is formed by the AAA ATPase Vps4 and its cofactor Vta1.","definition_xrefs":["PMID:20653365","PMID:21925211","GOC:bhm","PMID:24456136","PMID:26775243","GOC:ha","PMID:20696398","PMID:25164817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"ESCRT IV complex","synonyms":[{"name":"ESCRT-IV","type":"exact"},{"name":"VPS4A-VPS4B","type":"narrow"},{"name":"VPS4A/B complex","type":"narrow"},{"name":"Vps4 complex","type":"related"},{"name":"Vps4-Vta1 complex","type":"narrow"},{"name":"Vta1-Vps4 complex","type":"related"},{"name":"vacuolar protein sorting-associated complex","type":"related"}],"termid":"GO:1990621"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: GO:0044182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}


id: GO:0033671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of NAD+ kinase activity","termid":"GO:0033670"},{"relation_name":"is_a","term_name":"negative regulation of kinase activity","termid":"GO:0033673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD+ kinase activity","synonyms":[{"name":"NAD+ kinase inhibitor","type":"narrow"},{"name":"down regulation of NAD+ kinase activity","type":"exact"},{"name":"down-regulation of NAD+ kinase activity","type":"exact"},{"name":"downregulation of NAD+ kinase activity","type":"exact"},{"name":"inhibition of NAD+ kinase activity","type":"narrow"}],"termid":"GO:0033671"}


id: PBO:0082979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic tryptophanyl-tRNA synthetase; aminoacylates tryptophanyl-tRNA; human homolog WARS can complement yeast null mutant","termid":"PBO:0082979"}


id: GO:0102716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A28 + 2-oxoglutarate + O2 = (2betaOH)-gibberellin28 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin A28,oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6547"],"termid":"GO:0102716"}


id: PBO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by missassembly of the cosmid","termid":"PBO:0002567"}


id: GO:0008198
data:
  {"annotated_genes":["SJAG_03862","SJAG_03225","SJAG_00532","SJAG_01418","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89056,96649,97299,100803,109943],"is_not":false,"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to a ferrous iron ion, Fe(II).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00532":null,"SJAG_01418":null,"SJAG_03225":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ferrous iron binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008198","terms_by_termid":{"GO:0008198":null}}


id: PBO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf2 (predicted)","termid":"PBO:0002274"}


id: PBO:0049582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.7 histone (putative)","termid":"PBO:0049582"}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: PBO:0090010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L22","termid":"PBO:0090010"}


id: GO:0018834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dichloromethane + H2O = 2 chloride + formaldehyde + 2 H+.","definition_xrefs":["EC:4.5.1.3","RHEA:15397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"dichloromethane dehalogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0188","MetaCyc:DICHLOROMETHANE-DEHALOGENASE-RXN","KEGG_REACTION:R00603"],"synonyms":[{"name":"dichloromethane chloride-lyase (adding H2O; chloride-hydrolysing; formaldehyde-forming)","type":"related"},{"name":"dichloromethane chloride-lyase (chloride-hydrolysing)","type":"related"}],"termid":"GO:0018834"}


id: PBO:0076111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX17 divergent transcript","termid":"PBO:0076111"}


id: GO:2000556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell cytokine production","termid":"GO:0002726"},{"relation_name":"is_a","term_name":"positive regulation of T-helper 1 type immune response","termid":"GO:0002827"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"positive regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000556"}


id: GO:0005338
data:
  {"annotated_genes":["SJAG_01960","SJAG_01177","SJAG_04162","SJAG_00339","SJAG_04697","SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[85124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[84527,108433,111609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[108434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[101037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[101038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleotide-sugar from one side of a membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:mtg_transport","PMID:15034926","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-744230","Reactome:R-HSA-9792608","GO:0005339","Reactome:R-HSA-744231"],"termid":"GO:0005338","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null}}


id: PBO:0045980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS homologous factor","termid":"PBO:0045980"}


id: GO:0060284
data:
  {"annotated_genes":["SJAG_04140","SJAG_02169","SJAG_02392","SJAG_03581","SJAG_04853","SJAG_00993","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90678,85997,91949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[107258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[86850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[98369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00993":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060284","terms_by_termid":{"GO:0034307":null,"GO:0051517":null,"GO:0051519":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0051453
data:
  {"annotated_genes":["SJAG_01397","SJAG_01913","SJAG_02023","SJAG_05294","SJAG_00212","SJAG_04955","SJAG_01669","SJAG_01817","SJAG_04258","SJAG_00301","SJAG_04616","SJAG_00516","SJAG_01129","SJAG_00136","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83858,83859,94911,109836],"is_not":false,"summary":null,"term":"GO:0051453"},{"annotations":[86293,98063,97715,99988,85979,114734,96090,85455,91761,95003,84197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH","termid":"GO:0030641"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell pH regulation","type":"exact"},{"name":"cellular pH regulation","type":"exact"},{"name":"pH regulation in cell","type":"exact"},{"name":"regulation of cell pH","type":"exact"}],"termid":"GO:0051453","terms_by_termid":{"GO:0007035":null,"GO:0051453":null}}


id: PBO:0061955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 9 pseudogene","termid":"PBO:0061955"}


id: GO:0102564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aurachin C epoxide + H+ + NAD(P)H = aurachin B + H2O + NAD(P).","definition_xrefs":["GOC:pz","EC:3.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aurachin C epoxide hydrolase/isomerase activity","secondary_identifiers":["MetaCyc:RXN-15030","RHEA:48728"],"termid":"GO:0102564"}


id: PBO:0069795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1081, pseudogene","termid":"PBO:0069795"}


id: GO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD63.","definition_xrefs":["PMID:7629079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA3-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0071081"}


id: PBO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_subcellular_component","termid":"PBO:0031088"}


id: GO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich plasma lipoprotein particle","termid":"GO:0034385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"very-low-density lipoprotein particle","synonyms":[{"name":"VLDL complex","type":"exact"},{"name":"VLDL particle","type":"exact"},{"name":"very-low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034361"}


id: PBO:0074407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 1","termid":"PBO:0074407"}


id: PBO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REreplication","termid":"PBO:0000353"}


id: GO:0045489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues.","definition_xrefs":["GOC:go_curators","PMID:11931668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pectin biosynthetic process","synonyms":[{"name":"pectin anabolism","type":"exact"},{"name":"pectin biosynthesis","type":"exact"},{"name":"pectin formation","type":"exact"},{"name":"pectin synthesis","type":"exact"}],"termid":"GO:0045489"}


id: PR:O13719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.12c","synonyms":[{"name":"Spom972h-laf1","type":"exact"},{"name":"clr6 L-associated factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13719"}


id: GO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"gastric acid secretion","synonyms":[{"name":"hydrochloric acid secretion","type":"narrow"}],"termid":"GO:0001696"}


id: GO:0140781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ilicicolin H, a 4-hydroxy-2-pyridone alkaloid that has potent and broad antifungal activities by inhibiting the mitochondrial respiration chain.","definition_xrefs":["PMID:34947016","PMID:30905148","PMID:31216742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ilicicolin H biosynthetic process","synonyms":[{"name":"ilicicolin H anabolism","type":"exact"},{"name":"ilicicolin H biosynthesis","type":"exact"},{"name":"ilicicolin H formation","type":"exact"},{"name":"ilicicolin H synthesis","type":"exact"}],"termid":"GO:0140781"}


id: PBO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 147 pseudogene","termid":"PBO:0070215"}


id: GO:0003964
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104006,104005],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0003721"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time.","definition_xrefs":["EC:2.7.7.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"RNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-164520","MetaCyc:RNA-DIRECTED-DNA-POLYMERASE-RXN","Reactome:R-HSA-164504"],"synonyms":[{"name":"DNA nucleotidyltransferase (RNA-directed) activity","type":"related"},{"name":"RNA revertase activity","type":"related"},{"name":"RNA-dependent DNA polymerase activity","type":"related"},{"name":"RNA-dependent deoxyribonucleate nucleotidyltransferase activity","type":"related"},{"name":"RNA-directed DNA polymerase, group II intron encoded","type":"narrow"},{"name":"RNA-directed DNA polymerase, transposon encoded","type":"narrow"},{"name":"RNA-instructed DNA polymerase activity","type":"related"},{"name":"RT","type":"related"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (RNA-directed) activity","type":"related"},{"name":"reverse transcriptase activity","type":"related"},{"name":"revertase activity","type":"related"}],"termid":"GO:0003964","terms_by_termid":{"GO:0003721":null}}


id: GO:0035372
data:
  {"annotated_genes":["SJAG_02045","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87494],"is_not":false,"summary":null,"term":"GO:0035372"},{"annotations":[93081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a microtubule.","definition_xrefs":["GOC:lb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule","type":"exact"}],"termid":"GO:0035372","terms_by_termid":{"GO:0035372":null,"GO:1904518":null}}


id: PR:O36016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa1 gene.","definition_xrefs":["UniProtKB:O36016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.04","synonyms":[{"name":"PPIase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa1","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36016"}


id: RO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"releases_neurotransmitter","termid":"RO:0002111"}


id: PBO:0029037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_surface","termid":"PBO:0029037"}


id: PBO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2 like 3 pseudogene 1","termid":"PBO:0060941"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: GO:1900075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"},{"relation_name":"positively_regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuromuscular synaptic transmission","synonyms":[{"name":"activation of neuromuscular synaptic transmission","type":"related"},{"name":"up regulation of neuromuscular synaptic transmission","type":"related"},{"name":"up-regulation of neuromuscular synaptic transmission","type":"related"},{"name":"upregulation of neuromuscular synaptic transmission","type":"related"}],"termid":"GO:1900075"}


id: GO:0048210
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92052],"is_not":false,"summary":null,"term":"GO:0048210"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi transport vesicle to the target lipid bilayer membrane.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Golgi vesicle fusion to target membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle fusion to target membrane","type":"exact"},{"name":"dictyosome vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048210","terms_by_termid":{"GO:0048210":null}}


