# terms

id: GO:0050070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine = 2-acyl-sn-glycero-3-phosphocholine.","definition_xrefs":["RHEA:24356","EC:5.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"lysolecithin acylmutase activity","secondary_identifiers":["KEGG_REACTION:R03334","MetaCyc:LYSOLECITHIN-ACYLMUTASE-RXN"],"synonyms":[{"name":"lysolecithin 2,3-acylmutase activity","type":"related"},{"name":"lysolecithin migratase activity","type":"related"}],"termid":"GO:0050070"}


id: PBO:0083236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation phenotype is likely due to the overlapping verified ORF SKI8/YGL213C","termid":"PBO:0083236"}


id: GO:0140584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA translocase activity that folds chromosomal DNA and catalytically extends the newly formed loop, driven by ATP hydrolysis.","definition_xrefs":["PMID:26499245","PMID:27210764","PMID:23074191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA translocase activity","termid":"GO:0015616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chromatin extrusion motor activity","synonyms":[{"name":"chromatin extrusion activity","type":"exact"}],"termid":"GO:0140584"}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["RHEA:24935","PMID:27286964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: PBO:0028001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_polyubiquitination","termid":"PBO:0028001"}


id: GO:0044082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a small GTPase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","synonyms":[{"name":"modulation by symbiont of host small GTPase mediated signal transduction","type":"exact"},{"name":"modulation of host small GTPase mediated signal transduction by symbiont","type":"exact"},{"name":"perturbation of host small GTPase mediated signal transduction","type":"exact"},{"name":"regulation by symbiont of host small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0044082"}


id: GO:1905572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ganglioside GM1 to membrane.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"ganglioside GM1 transport to membrane","termid":"GO:1905572"}


id: GO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the follicle cells of an insect ovary along the anterior/posterior axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"anterior/posterior axis specification, follicular epithelium","synonyms":[{"name":"anterior/posterior axis determination, follicular epithelium","type":"exact"}],"termid":"GO:0030714"}


id: GO:0141052
data:
  {"annotated_genes":["SJAG_03997","SJAG_03041","SJAG_01465","SJAG_03635","SJAG_03286","SJAG_02401","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108291,83552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[83554,92755,109121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[108292,113776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[99312,90187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0032452","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141052","terms_by_termid":{"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: FYPO:0002884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to osmotic stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000294","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription during cellular response to osmotic stress","synonyms":[{"name":"normal transcription during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to osmotic stress","type":"exact"}],"termid":"FYPO:0002884"}


id: PBO:0077434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 168","termid":"PBO:0077434"}


id: PBO:0076678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 3","termid":"PBO:0076678"}


id: GO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glycine modification","termid":"GO:0018201"}


id: GO:0000902
data:
  {"annotated_genes":["SJAG_00216","SJAG_04461","SJAG_02838","SJAG_00596","SJAG_03581","SJAG_01894","SJAG_02700","SJAG_02989","SJAG_00514","SJAG_04666","SJAG_00333","SJAG_04322","SJAG_00845","SJAG_02169","SJAG_00244","SJAG_02022","SJAG_04509","SJAG_01943","SJAG_04724","SJAG_02864","SJAG_01799","SJAG_00028","SJAG_01017","SJAG_03637","SJAG_01993","SJAG_02392","SJAG_01456","SJAG_02536","SJAG_03486","SJAG_00236","SJAG_03705","SJAG_00661","SJAG_04522","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90678,91949,85997],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[84051,90122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[106825,95815,113920,112529,84215,99568,102914],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[100596],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061246"},{"annotations":[95064,88613,94387,84417,94985,110376],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[86850],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[103680,112634],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[96253,89843,99781,101411],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[111097],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[115286,115285],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0008360"},{"annotations":[96256,114793,87252,91769,100600,101414,109111,90684],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[88527,84060,98927],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"The developmental process in which the size or shape of a cell is generated and organized.","definition_xrefs":["GOC:tb","GOC:clt","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02700":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0045790","GO:0045791","GO:0007148"],"synonyms":[{"name":"cellular morphogenesis","type":"exact"}],"termid":"GO:0000902","terms_by_termid":{"GO:0008360":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061246":null,"GO:1904600":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: GO:0004923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukemia inhibitory factor (LIF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary neurotrophic factor receptor activity","termid":"GO:0004897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukemia inhibitory factor receptor activity","secondary_identifiers":["GO:0004899"],"synonyms":[{"name":"LIF receptor activity","type":"exact"},{"name":"leukemia inhibitory factor receptor beta-protein activity","type":"narrow"}],"termid":"GO:0004923"}


id: GO:0052821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 7-methyladenine + H2O = DNA with abasic site + 7-methyladenine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 7-methyladenine and the deoxyribose sugar to remove the 7-methyladenine, leaving an abasic site.","definition_xrefs":["GOC:jl","PMID:16468998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0140097","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"DNA-7-methyladenine glycosylase activity","secondary_identifiers":["EC:3.2.2.21","MetaCyc:3.2.2.21-RXN"],"termid":"GO:0052821"}


id: GO:0097506
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated bases.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"deaminated base DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA glycosylase activity acting on deaminated bases","type":"exact"},{"name":"deaminated base DNA glycosylase activity","type":"exact"}],"termid":"GO:0097506","terms_by_termid":{"GO:0004844":null}}


id: PBO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited protein folding defects","termid":"PBO:0001332"}


id: PBO:0004771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs23 (predicted)","termid":"PBO:0004771"}


id: GO:1904928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in a canonical Wnt signaling pathway.","definition_xrefs":["GO_REF:0000061","PMID:24431302","GOC:bf","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in canonical Wnt signaling pathway (obsolete GO:1904928)","synonyms":[{"name":"Wnt co-receptor activity, canonical signaling","type":"exact"},{"name":"Wnt co-receptor, canonical pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt receptor signaling pathway","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt-activated signaling pathway","type":"exact"},{"name":"coreceptor activity involved in frizzled-1 receptor signaling pathway","type":"narrow"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"}],"termid":"GO:1904928"}


id: PBO:0090834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane thiamine/proton high affinity transmembrane transporter Thi9","termid":"PBO:0090834"}


id: PBO:0091987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf23","termid":"PBO:0091987"}


id: GO:0048763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables transmembrane transfer of calcium ions from an intracellular store to the cytosol on induction by increased calcium concentration.","definition_xrefs":["PMID:8653752","PMID:8381210","PMID:2990997","GOC:jid","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"calcium-induced calcium release activity","secondary_identifiers":["Reactome:R-HSA-2855020"],"termid":"GO:0048763"}


id: GO:0110053
data:
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id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PomBase:mlr","PMID:19879140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000707","FYPO:0000652","FYPO:0002114","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: PBO:0079173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 2","termid":"PBO:0079173"}


id: FYPO:0000878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000868"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"v histone lysine H3 K9 dimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000878"}


id: PBO:0079590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 2","termid":"PBO:0079590"}


id: PBO:0046867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas apoptotic inhibitory molecule","termid":"PBO:0046867"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: GO:0060491
data:
  {"annotated_genes":["SJAG_02379","SJAG_04509","SJAG_01794","SJAG_03453","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89580,84055,86968,107421,86001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell projection assembly.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"cell projection assembly","termid":"GO:0030031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection formation","type":"related"}],"termid":"GO:0060491","terms_by_termid":{"GO:1902917":null}}


id: PBO:0090843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase histone chaperone","termid":"PBO:0090843"}


id: GO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:dph","GOC:ai","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular component movement (obsolete GO:0051272)","synonyms":[{"name":"positive regulation of cellular component motion","type":"exact"}],"termid":"GO:0051272"}


id: FYPO:0004083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level","synonyms":[{"name":"protein/peptide accumulation: normal","type":"related"}],"termid":"FYPO:0004083"}


id: SO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that occurs within a gene but falls outside of all transcript features. This occurs when alternate transcripts of a gene do not share overlapping sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intragenic_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:intragenic_variant","type":"exact"},{"name":"intragenic variant","type":"exact"},{"name":"snpEff:INTRAGENIC","type":"exact"}],"termid":"SO:0002011"}


id: FYPO:0001680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the round of DNA replication that precedes meiosis I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to chromatin during premeiotic DNA replication","synonyms":[{"name":"abolished protein localisation to chromatin during premeiotic DNA replication","type":"exact"},{"name":"protein localization to chromatin during premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0001680"}


id: PBO:0086885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; binds chromatin; involved in expression homeostasis, buffering of mRNA synthesis rate against gene dosage changes during S phase; target of SBF transcription factor; expression is periodic and peaks in G1; involved in DNA replication checkpoint response; interacts with Rpd3 and Set3 histone deacetylase complexes; APCC(Cdh1) substrate; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0086885"}


id: PBO:0069215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 470, pseudogene","termid":"PBO:0069215"}


id: GO:0010966
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transport. Phosphate transport is the directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010966","terms_by_termid":{"GO:2000185":null}}


id: PBO:0031459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cycloheximide","termid":"PBO:0031459"}


id: GO:1903486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any establishment of actomyosin contractile ring localization that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitotic actomyosin contractile ring localization (obsolete GO:1903486)","termid":"GO:1903486"}


id: PR:Q9UTK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup98-Nup96 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01336","PANTHER:PTHR23198:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup189 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.05","secondary_identifiers":["UniProtKB:Q9UTK4"],"synonyms":[{"name":"Spom972h-NUP98","type":"exact"},{"name":"nuclear pore protein nup189 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK4"}


id: PBO:0075987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 pseudogene 1","termid":"PBO:0075987"}


id: PBO:0000246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRRAP family protein","termid":"PBO:0000246"}


id: GO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by hydrogen peroxide. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["PMID:16036580","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"programmed cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0010421"}


id: PBO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporter complex subunit Ctr4","termid":"PBO:0005289"}


id: GO:0034701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a tripeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tripeptidase activity","secondary_identifiers":["MetaCyc:3.4.11.4-RXN"],"termid":"GO:0034701"}


id: GO:0018646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,4R)-1-hydroxy-2-oxolimonene + NADPH + O2 = NADP+ + OH- + (3R)-3-isopropenyl-6-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r0736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-hydroxy-2-oxolimonene 1,2-monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0018646"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104365],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: PBO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1 pseudogene 1","termid":"PBO:0060672"}


id: GO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the salivary gland to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in salivary gland development","termid":"GO:0060691"}


id: PBO:0059057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A","termid":"PBO:0059057"}


id: GO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the lens is maintained in a highly refractive, transparent state to allow for optimal focusing of light on the retina.","definition_xrefs":["GOC:nhn","PMID:22095752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of lens transparency","synonyms":[{"name":"maintenance of ocular lens transparency","type":"exact"},{"name":"preservation of lens transparency","type":"exact"}],"termid":"GO:0036438"}


id: GO:0106359
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107893],"is_not":false,"summary":null,"term":"GO:0106359"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-hydroxy fatty acyl-CoA = a fatty aldehyde + formyl-CoA. The reaction acts on 2-hydroxy-3-methyl-branched fatty acyl-CoA and 2-hydroxy-long-chain fatty acyl-CoA.","definition_xrefs":["PMID:21708296","PMID:28289220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.2.63","MetaCyc:RXN66-471"],"termid":"GO:0106359","terms_by_termid":{"GO:0106359":null}}


id: GO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the first transesterification reaction of U12-type spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, which is still joined to the 3' exon. The catalytic site is thought to be formed by U6atac snRNA and/or U2atac snRNA, and/or associated proteins.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete first U12-type spliceosomal transesterification activity (obsolete GO:0000363)","synonyms":[{"name":"first U12-type spliceosomal transesterification activity","type":"exact"},{"name":"lariat formation, 5'-splice site cleavage","type":"broad"}],"termid":"GO:0000363"}


id: PBO:0088656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, chaperone for V-type ATPase, BIG1 family","termid":"PBO:0088656"}


id: GO:0010021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amylopectin, the (1->4) linked alpha glucose units with alpha-(1->6) linkages.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amylopectin biosynthetic process","synonyms":[{"name":"amylopectin anabolism","type":"exact"},{"name":"amylopectin biosynthesis","type":"exact"},{"name":"amylopectin formation","type":"exact"},{"name":"amylopectin synthesis","type":"exact"}],"termid":"GO:0010021"}


id: PBO:0068049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 354","termid":"PBO:0068049"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: GO:0032571
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin K stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin K","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032571","terms_by_termid":{"GO:0036245":null}}


id: PBO:0068811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 48, pseudogene","termid":"PBO:0068811"}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:16935884","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: GO:0017054
data:
  {"annotated_genes":["SJAG_00958","SJAG_03095"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86789,104558],"is_not":false,"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that can stably associate with TATA-binding protein on promoters, thereby preventing the assembly of transcription factors TFIIA and TFIIB and leading to repression of RNA polymerase II transcription. The two subunits, NC2alpha (Drap1) and NC2beta (Dr1), dimerize through histone fold domains of the H2A/H2B type present in the amino termini.","definition_xrefs":["PMID:15574413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00958":null,"SJAG_03095":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"negative cofactor 2 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017054","terms_by_termid":{"GO:0017054":null}}


id: PBO:0055942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 51","termid":"PBO:0055942"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: PATO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the consistency of water.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"watery","termid":"PATO:0002408"}


id: GO:0008589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway","secondary_identifiers":["GO:0007226","GO:0043109"],"synonyms":[{"name":"regulation of hedgehog signaling pathway","type":"exact"},{"name":"regulation of hh signaling pathway","type":"exact"},{"name":"regulation of smoothened activity","type":"related"},{"name":"regulation of smoothened by patched","type":"related"},{"name":"regulation of smoothened receptor activity by patched","type":"related"},{"name":"regulation of smoothened signalling pathway","type":"exact"}],"termid":"GO:0008589"}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: PBO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 6","termid":"PBO:0060709"}


id: GO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the activity of host tetherin activity. Tetherin (also known as BST2) is an alpha interferon-inducible cellular factor that impairs the release of many enveloped viruses. By blocking tetherin activity, many viruses circumvent its antiviral effects.","definition_xrefs":["PMID:22493439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virus-mediated perturbation of host defense response","termid":"GO:0019049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host tetherin activity","synonyms":[{"name":"inhibition of host BST2/Tetherin by virus","type":"exact"}],"termid":"GO:0039587"}


id: PBO:0085435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) polymerase; one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs; required for gene looping","termid":"PBO:0085435"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","PMID:15514116","GOC:kom","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: PBO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 11","termid":"PBO:0042427"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: PBO:0068034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 339","termid":"PBO:0068034"}


id: GO:0070079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from arginine at position 3 of the histone.","definition_xrefs":["GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-R3 demethylation (obsolete GO:0070079)","termid":"GO:0070079"}


id: PBO:0025542
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair-deficiency disorder","termid":"PBO:0025542"}


id: PBO:0090331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Csi1 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090331"}


id: PBO:0079732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 9 (pseudogene)","termid":"PBO:0079732"}


id: PBO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0005332"}


id: GO:1903152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any copper ion transmembrane transporter activity that is involved in copper ion import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transmembrane transporter activity involved in copper ion import into cell (obsolete GO:1903152)","synonyms":[{"name":"copper ion transmembrane transporter activity involved in copper cation import into cell","type":"exact"},{"name":"copper ion transmembrane transporter activity involved in copper ion import into cell","type":"exact"},{"name":"intracellular copper ion transporter involved in copper cation import into cell","type":"narrow"},{"name":"intracellular copper ion transporter involved in copper ion import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper cation import into cell","type":"narrow"},{"name":"plasma membrane copper transporter involved in copper ion import into cell","type":"narrow"}],"termid":"GO:1903152"}


id: GO:0045892
data:
  {"annotated_genes":["SJAG_01799","SJAG_04607","SJAG_02752","SJAG_00926","SJAG_00142","SJAG_00163","SJAG_03319","SJAG_03067","SJAG_02981","SJAG_00124","SJAG_04039","SJAG_03081","SJAG_01000","SJAG_00266","SJAG_01680","SJAG_04539","SJAG_03473","SJAG_04249","SJAG_00996","SJAG_02104","SJAG_02444","SJAG_00861","SJAG_04613","SJAG_02255","SJAG_02385","SJAG_04584","SJAG_00987","SJAG_01199","SJAG_00969","SJAG_02898","SJAG_04312","SJAG_03911","SJAG_04026","SJAG_03143","SJAG_02846","SJAG_04921","SJAG_04186","SJAG_00290","SJAG_01804","SJAG_04512","SJAG_03845","SJAG_04268","SJAG_01157","SJAG_01728","SJAG_01311","SJAG_02730","SJAG_04381","SJAG_01230","SJAG_01707","SJAG_00802","SJAG_00792","SJAG_01254","SJAG_00441","SJAG_02858","SJAG_00410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97150],"is_not":false,"summary":null,"term":"GO:0045892"},{"annotations":[102309,70985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[104036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[108151,101082,113397,104637,90743,97926,111675,87295,89842,102552,105080,110317,112123,97072,97050,83750,90824,109034,100333,109895,90168,98859,102791,88261,88238,102311,107202,106789,99635,110629,84989,89492,104038,104298,100032,79286,89389,89985,94973,100267,101960,86183,101866,102565,90330,87365,102809,89882,92381,103063,104520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[92489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[97073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[113949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_03911":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016481","GO:0061021","GO:0032582"],"synonyms":[{"name":"down regulation of gene-specific transcription","type":"related"},{"name":"down regulation of transcription, DNA-dependent","type":"exact"},{"name":"down-regulation of gene-specific transcription","type":"related"},{"name":"down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"downregulation of gene-specific transcription","type":"related"},{"name":"downregulation of transcription, DNA-dependent","type":"exact"},{"name":"inhibition of gene-specific transcription","type":"related"},{"name":"inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of gene-specific transcription","type":"related"},{"name":"negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of transcription, DNA-templated","type":"exact"},{"name":"transcription repressor activity","type":"related"}],"termid":"GO:0045892","terms_by_termid":{"GO:0000122":null,"GO:0000433":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: PBO:0082845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding metallothionein; required for wild-type copper resistance","termid":"PBO:0082845"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: PBO:0015700
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kcat/Km 2.3x10^4 min-1 M-1","termid":"PBO:0015700"}


id: PBO:0083579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; similar to YLR334C and YOL106W","termid":"PBO:0083579"}


id: PBO:0080414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 45 homolog","termid":"PBO:0080414"}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: PBO:0081596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 2","termid":"PBO:0081596"}


id: PBO:0076025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24","termid":"PBO:0076025"}


id: PBO:0045104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in malignant brain tumors 1","termid":"PBO:0045104"}


id: FYPO:0004943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, morphology, or other physical characteristic of the mitochondrion is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitochondrion","synonyms":[{"name":"abnormal mitochondria","type":"exact"},{"name":"abnormal mitochondrion during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion during vegetative growth","type":"exact"}],"termid":"FYPO:0004943"}


id: PBO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54","termid":"PBO:0039561"}


id: GO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. These are terms that have been removed from the active component ontology.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component (obsolete GO:0008370)","termid":"GO:0008370"}


id: GO:0060409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"positively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acetylcholine metabolic process","termid":"GO:0060409"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: GO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of phytyl group from the stepwise reduction of a geranylgeranyl group.","definition_xrefs":["PMID:9492312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"geranylgeranyl reductase activity","termid":"GO:0045550"}


id: GO:0009759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"indole glucosinolate metabolic process","termid":"GO:0042343"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"indole glucosinolate biosynthetic process","synonyms":[{"name":"indole glucosinolate anabolism","type":"exact"},{"name":"indole glucosinolate biosynthesis","type":"exact"},{"name":"indole glucosinolate formation","type":"exact"},{"name":"indole glucosinolate synthesis","type":"exact"}],"termid":"GO:0009759"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PBO:0040828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 3","termid":"PBO:0040828"}


id: PBO:0039079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 5 pseudogene 1","termid":"PBO:0039079"}


id: PBO:0040281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A1 antisense RNA 1","termid":"PBO:0040281"}


id: GO:0006578
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[107593,99706,107594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[99707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[107595,99708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"betaine biosynthesis","type":"exact"},{"name":"betaine anabolism","type":"exact"},{"name":"betaine biosynthetic process","type":"exact"},{"name":"betaine formation","type":"exact"},{"name":"betaine synthesis","type":"exact"}],"termid":"GO:0006578","terms_by_termid":{"GO:0052699":null,"GO:0052707":null,"GO:0140479":null,"GO:1903257":null}}


id: GO:0009853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved. The substrate is glycolate formed in large quantities in chloroplasts from 2-phosphoglycolate generated from ribulose 1,5-bisphosphate by the action of ribulose-bisphosphate carboxylase; the glycolate enters the peroxisomes where it is converted by glycolate oxidase to glyoxylate which undergoes transamination to glycine. This then passes into the mitochondria where it is decarboxylated forming one molecule of serine for every two molecules of glycine. This pathway also exists in photosynthetic bacteria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photorespiration","secondary_identifiers":["Wikipedia:Photorespiration","MetaCyc:PWY-181"],"synonyms":[{"name":"photorespiratory pathway","type":"exact"}],"termid":"GO:0009853"}


id: PBO:0046349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 7","termid":"PBO:0046349"}


id: PBO:0069016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 260, pseudogene","termid":"PBO:0069016"}


id: FYPO:0001033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal double-strand break repair","synonyms":[{"name":"normal double-strand break repair during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0001033"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: GO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin.","definition_xrefs":["EC:3.1.6.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"iduronate-2-sulfatase activity","secondary_identifiers":["Reactome:R-HSA-1793182","Reactome:R-HSA-2262743","Reactome:R-HSA-1678650","MetaCyc:3.1.6.13-RXN","Reactome:R-HSA-9036046"],"synonyms":[{"name":"2-sulfo-L-iduronate 2-sulfatase activity","type":"related"},{"name":"L-iduronate 2-sulfate sulfatase activity","type":"related"},{"name":"L-iduronate-2-sulfate 2-sulfohydrolase activity","type":"related"},{"name":"L-idurono sulfate sulfatase activity","type":"related"},{"name":"L-iduronosulfatase activity","type":"related"},{"name":"chondroitinsulfatase","type":"broad"},{"name":"iduronate sulfatase activity","type":"related"},{"name":"iduronate sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulfate sulfatase activity","type":"related"},{"name":"iduronate-2-sulphatase activity","type":"exact"},{"name":"iduronide-2-sulfate sulfatase activity","type":"related"},{"name":"idurono-2-sulfatase activity","type":"related"},{"name":"sulfo-L-iduronate sulfatase activity","type":"related"},{"name":"sulfoiduronate sulfohydrolase activity","type":"related"}],"termid":"GO:0004423"}


id: GO:0101025
data:
  {"annotated_genes":["SJAG_04509","SJAG_04883","SJAG_03313","SJAG_04972","SJAG_04319","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94455,84054,105979,93784,106386,89149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"The process in which a nuclear membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101025","terms_by_termid":{"GO:0101026":null}}


id: PBO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 45","termid":"PBO:0050267"}


id: PBO:0041280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 6","termid":"PBO:0041280"}


id: PBO:0061075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor interacting Ras like 2","termid":"PBO:0061075"}


id: PBO:0086243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain","termid":"PBO:0086243"}


id: PBO:0078034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 24","termid":"PBO:0078034"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: PBO:0059949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 35","termid":"PBO:0059949"}


id: FYPO:0002519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell cycle arrest that normally occurs in response to mitotic G2/M transition cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic G2/M transition checkpoint activation abolished","type":"exact"},{"name":"mitotic G2/M checkpoint arrest deficient","type":"related"}],"termid":"FYPO:0002519"}


id: FYPO:0000027
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell wall during vegetative growth","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal cell wall during mitotic cell cycle","type":"related"},{"name":"cell wall defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000027","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0086598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is cell-cycle regulated as shown by microarray analysis; potential regulatory target of Mbp1p, which binds to the YJL181W promoter region; contains a PH-like domain; RBH1 has a paralog, RBH2, that arose from the whole genome duplication","termid":"PBO:0086598"}


id: PBO:0027479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_mitotic_G2/M_transition_delay_and_cell_cycle_arrest_in_M_phase","termid":"PBO:0027479"}


id: PATO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"elastic","termid":"PATO:0001171"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elasticity","termid":"PATO:0002288"}


id: PR:O42972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.02c gene.","definition_xrefs":["UniProtKB:O42972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0588 membrane protein C20F10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.02c","synonyms":[{"name":"Spom972h-SPBC20F10.02c","type":"exact"}],"termid":"PR:O42972"}


id: PR:Q9HGL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Ts, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11741:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor Ts, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.07c","secondary_identifiers":["UniProtKB:Q9HGL5"],"synonyms":[{"name":"EF-Ts (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"EF-TsMt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC800.07c","type":"related"},{"name":"Spom972h-TSFM","type":"exact"}],"termid":"PR:Q9HGL5"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: PBO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor-like 5, pseudogene","termid":"PBO:0044577"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: GO:2000698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"positively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"}


id: PBO:0085106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear response regulator and transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; part of a branched two-component signaling system; required for optimal induction of heat-shock genes in response to oxidative stress; involved in osmoregulation; relocalizes to the cytosol in response to hypoxia; SKN7 has a paralog, HMS2, that arose from the whole genome duplication","termid":"PBO:0085106"}


id: GO:1902328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication initiation","termid":"GO:1902292"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"bacterial-type DNA replication initiation","synonyms":[{"name":"DNA endoreduplication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in bacterial-type DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in bacterial-type DNA replication","type":"exact"},{"name":"DNA-dependent DNA replication initiation involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902328"}


id: GO:0034887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,4-dihydroisonicotinate + O2 = gamma-N-formylaminovinylacetaldehyde + CO2.","definition_xrefs":["UM-BBD_reactionID:r1348"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,4-dihydroisonicotinate 2,3-dioxygenase activity (obsolete GO:0034887)","synonyms":[{"name":"1,4-dihydroisonicotinate 2,3-dioxygenase activity","type":"exact"}],"termid":"GO:0034887"}


id: FYPO:0006514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere structure","synonyms":[{"name":"normal chromosome structure at telomere","type":"exact"},{"name":"normal chromosome structure at telomeric region","type":"exact"},{"name":"normal telomeric region structure","type":"exact"}],"termid":"FYPO:0006514"}


id: PBO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 2","termid":"PBO:0046115"}


id: CHEBI:28939
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-cysteine","termid":"CHEBI:28939"}


id: FYPO:0003311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR formyltransferase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal phosphoribosylaminoimidazolecarboxamide formyltransferase activity","synonyms":[{"name":"abnormal AICAR formyltransferase activity","type":"exact"}],"termid":"FYPO:0003311"}


id: PBO:0034700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading factor (adherin) Mis4","termid":"PBO:0034700"}


id: PBO:0083026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this ORF was removed when a sequence update created a stop codon after residue 23","termid":"PBO:0083026"}


id: PATO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being thinner or more losely packed.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decondensed","termid":"PATO:0002452"}


id: PBO:0073273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 9","termid":"PBO:0073273"}


id: PBO:0087614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for chromosome condensation and for clustering of tRNA genes at the nucleolus; may influence multiple aspects of chromosome transmission","termid":"PBO:0087614"}


id: FYPO:0003124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"abnormal cytoplasmic translation","synonyms":[{"name":"abnormal cytoplasmic protein biosynthesis","type":"exact"},{"name":"abnormal cytoplasmic protein synthesis","type":"exact"},{"name":"abnormal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0003124"}


id: GO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic vesicle part (obsolete GO:0044433)","termid":"GO:0044433"}


id: PBO:0074353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 2","termid":"PBO:0074353"}


id: GO:0002825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: GO:0002948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 7-cyano-7-carbaguanine15 in tRNA + H2O = L-glutamate + archaeine15 in tRNA.","definition_xrefs":["PMID:20129918","RHEA:54084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"archaeosine synthase activity","secondary_identifiers":["Wikipedia:Archaeosine_synthase","EC:2.6.1.97"],"synonyms":[{"name":"ArcS","type":"related"},{"name":"glutamine:preQ0-tRNA amidinotransferase","type":"related"}],"termid":"GO:0002948"}


id: GO:1990590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF1 and ATF4 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') of the GRP78 (HSPA5) promoter. Involved in the ER stress response pathway.","definition_xrefs":["PMID:12871976","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"ATF1-ATF4 transcription factor complex","termid":"GO:1990590"}


id: GO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organohalogen metabolic process","termid":"GO:0090345"}


id: PBO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator (predicted)","termid":"PBO:0004464"}


id: PBO:0089048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase Nnt1","termid":"PBO:0089048"}


id: PBO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_metabolism_phenotype","termid":"PBO:0031290"}


id: PBO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by hydrogen peroxide","termid":"PBO:0001439"}


id: PBO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6 (predicted)","termid":"PBO:0004852"}


id: PBO:0025422
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid metabolism disorders","termid":"PBO:0025422"}


id: GO:0019412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of hydrogen (H2) to water (H2O), using oxygen (O2) as the electron acceptor. A hydrogenase enzyme binds H2 and the hydrogen atoms are passed through an electron transfer chain to O2 to form water.","definition_xrefs":["MetaCyc:P283-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using hydrogen as electron donor","synonyms":[{"name":"hydrogen oxidation","type":"broad"}],"termid":"GO:0019412"}


id: GO:0000276
data:
  {"annotated_genes":["SJAG_07003","SJAG_MIT37","SJAG_00836","SJAG_00985","SJAG_MIT15","SJAG_04122","SJAG_05204","SJAG_00133","SJAG_02105","SJAG_03925","SJAG_MIT09","SJAG_00542"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89371,89969,90941,97893,99761,103966,115056,115061,115065],"is_not":false,"summary":null,"term":"GO:0000276"},{"annotations":[99732,111891,103876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"All non-F1 subunits of the mitochondrial hydrogen-transporting ATP synthase, including integral and peripheral mitochondrial inner membrane proteins.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex","termid":"GO:0005753"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000276","terms_by_termid":{"GO:0000274":null,"GO:0000276":null}}


id: GO:0010354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to homogentisic acid.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}


id: PBO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex beta subunit Cct2","termid":"PBO:0000506"}


id: PBO:0063056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) specific ribonuclease subunit PAN3","termid":"PBO:0063056"}


id: GO:0150021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an apical dendrite are generated and organized.","definition_xrefs":["PMID:22683681","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"apical dendrite development","termid":"GO:0150022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite morphogenesis","termid":"GO:0150021"}


id: PBO:0076229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT20 homolog, SAGA complex component","termid":"PBO:0076229"}


id: GO:1990577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a methyl group from the C-terminal amino acid of a protein.","definition_xrefs":["PMID:11060018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylation","termid":"GO:0006482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"C-terminal protein demethylation","termid":"GO:1990577"}


id: FYPO:0007328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:31833215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal number of Rad52 foci during vegetative growth","synonyms":[{"name":"normal number of Rad22 foci","type":"exact"},{"name":"normal number of Rad52 foci during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007328"}


id: PBO:0047997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXM1-regulated, gastric cancer associated","termid":"PBO:0047997"}


id: _global:is_unit_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_unit_of","termid":"_global:is_unit_of"}


id: PBO:0035877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_during_mitotic_G1_phase","termid":"PBO:0035877"}


id: PBO:0050356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 59","termid":"PBO:0050356"}


id: GO:0002938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a guanosine residue in a tRNA is methylated on the 2'-hydroxyl group of the ribose moiety.","definition_xrefs":["ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA nucleoside ribose methylation","termid":"GO:0002128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA guanine ribose methylation","termid":"GO:0002938"}


id: SO:0001205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which the SP6 RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Phage_RNA_Polymerase_Promoter","termid":"SO:0001204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP6_RNA_Polymerase_Promoter","synonyms":[{"name":"SP6 RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001205"}


id: PBO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 5","termid":"PBO:0062107"}


id: GO:0086013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the cardiac muscle cell plasma membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during action potential","termid":"GO:0086011"},{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"}


id: GO:0050667
data:
  {"annotated_genes":["SJAG_04459","SJAG_02972","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86158,98807],"is_not":false,"summary":null,"term":"GO:0050667"},{"annotations":[106570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. Homocysteine is an important intermediate in the metabolic reactions of its S-methyl derivative, methionine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02972":null,"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"homocysteine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hcy metabolic process","type":"exact"},{"name":"Hcy metabolism","type":"exact"},{"name":"homocysteine metabolism","type":"exact"}],"termid":"GO:0050667","terms_by_termid":{"GO:0050667":null,"GO:0071269":null}}


id: PBO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein related to mammalian high mobility group (HMG) proteins; nuclear protein; essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing","termid":"PBO:0086099"}


id: GO:0102425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin + UDP-alpha-D-glucose = myricetin 3-O-beta-D-glucopyranoside + UDP.","definition_xrefs":["EC:2.4.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"myricetin 3-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13822"],"termid":"GO:0102425"}


id: PBO:0061134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME1-NME2 readthrough","termid":"PBO:0061134"}


id: PBO:0058638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6769b","termid":"PBO:0058638"}


id: GO:1904286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["GO_REF:0000058","PMID:25957689","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"},{"relation_name":"negatively_regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein-pyridoxal-5-phosphate linkage","synonyms":[{"name":"down regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"down-regulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"downregulation of protein-pyridoxal-5-phosphate linkage","type":"exact"},{"name":"inhibition of protein-pyridoxal-5-phosphate linkage","type":"narrow"}],"termid":"GO:1904286"}


id: PBO:0061952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 4","termid":"PBO:0061952"}


id: GO:0005891
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95709],"is_not":false,"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"voltage-gated calcium channel complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"voltage gated calcium channel complex","type":"exact"},{"name":"voltage-dependent calcium channel complex","type":"exact"},{"name":"voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0005891","terms_by_termid":{"GO:0005891":null}}


id: PBO:0077600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like, pseudogene","termid":"PBO:0077600"}


id: GO:0034957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-nitrophenol + 2 NADH + 2 H+ = 3-hydroxyaminophenol + 2 NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-nitrophenol nitroreductase activity","termid":"GO:0034957"}


id: GO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the cyanelle envelope; includes the peptidoglycan layer.","definition_xrefs":["GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle intermembrane space","synonyms":[{"name":"cyanelle envelope lumen","type":"exact"},{"name":"cyanelle periplasm","type":"exact"}],"termid":"GO:0036014"}


id: PBO:0040536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 2","termid":"PBO:0040536"}


id: PBO:0111907
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIPSY domain","termid":"PBO:0111907"}


id: PBO:0034486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_lipid_metabolism_gene_mRNA_during_cellular_response_to_hypoxia","termid":"PBO:0034486"}


id: GO:0072270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a short nephron in the metanephros over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical and superficial glomeruli, are situated entirely in the outer medulla, and have no thin ascending limb.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short nephron development","termid":"GO:0072030"},{"relation_name":"is_a","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric short nephron development","termid":"GO:0072270"}


id: PBO:0003487
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.13.11.-","termid":"PBO:0003487"}


id: SO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the structural change, an amplification of sequence, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_amplification","synonyms":[{"name":"feature amplification","type":"exact"}],"termid":"SO:0001880"}


id: PBO:0075651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 7 pseudogene 1","termid":"PBO:0075651"}


id: PBO:0055347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2775","termid":"PBO:0055347"}


id: GO:0033263
data:
  {"annotated_genes":["SJAG_00204","SJAG_01598","SJAG_02315","SJAG_04966","SJAG_03005","SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86305,96323,96382,100693,112933,114434],"is_not":false,"summary":null,"term":"GO:0033263"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that acts as an endosomal tethering complex (CORVET = class C core vacuole/endosome tethering) by cooperating with Rab GTPases to capture endosomal vesicles and trap them prior to the action of SNAREs; the complex is involved in endo-lysosomal biogenesis and required for transport between endosome and vacuole. The Saccharomyces cerevisiae complex contains Vps8p, Vps3p, Pep5p, Vps16p, Pep3p, and Vps33p.","definition_xrefs":["PMID:17488625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_01598":null,"SJAG_02315":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"CORVET complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033263","terms_by_termid":{"GO:0033263":null}}


id: PR:O13870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.05","synonyms":[{"name":"Spom972h-not3","type":"exact"}],"termid":"PR:O13870"}


id: GO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance.","definition_xrefs":["GOC:bf","Wikipedia:Chordate","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anal tail morphogenesis","termid":"GO:0036342"}


id: PBO:0089339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no go decay endonuclease Cue2","termid":"PBO:0089339"}


id: PBO:0080019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 5","termid":"PBO:0080019"}


id: GO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052516)","synonyms":[{"name":"induction by organism of symbiont JA-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont JA-mediated defense response","type":"exact"},{"name":"positive regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"}],"termid":"GO:0052516"}


id: GO:0042559
data:
  {"annotated_genes":["SJAG_03275","SJAG_00106","SJAG_03098","SJAG_03224","SJAG_04156","SJAG_01616","SJAG_01126","SJAG_02408","SJAG_00815","SJAG_00529","SJAG_01198","SJAG_02225"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104409,108471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[108472,86431,100847,109740,100995,104410,102139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[100653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[86432,104585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[110116,102140,86433,100996,109741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[89033,100812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03098":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pteridine and derivative biosynthesis","type":"exact"},{"name":"pteridine and derivative biosynthetic process","type":"exact"},{"name":"pteridine-containing compound anabolism","type":"exact"},{"name":"pteridine-containing compound biosynthesis","type":"exact"},{"name":"pteridine-containing compound formation","type":"exact"},{"name":"pteridine-containing compound synthesis","type":"exact"},{"name":"pterin biosynthesis","type":"narrow"},{"name":"pterin biosynthetic process","type":"narrow"}],"termid":"GO:0042559","terms_by_termid":{"GO:0006729":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null}}


id: GO:1904246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:kmv","GOC:TermGenie","PMID:19460348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of polynucleotide adenylyltransferase activity","termid":"GO:1904245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polynucleotide adenylyltransferase activity","synonyms":[{"name":"down regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"down regulation of NTP polymerase activity","type":"exact"},{"name":"down regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"down regulation of RNA formation factors, PF1","type":"related"},{"name":"down regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"down regulation of poly(A) hydrolase activity","type":"exact"},{"name":"down regulation of poly(A) polymerase activity","type":"exact"},{"name":"down regulation of poly(A) synthetase activity","type":"exact"},{"name":"down regulation of poly-A polymerase activity","type":"exact"},{"name":"down regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"down regulation of polyadenylate polymerase activity","type":"exact"},{"name":"down regulation of polyadenylate synthetase activity","type":"exact"},{"name":"down regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"down regulation of polyadenylic polymerase activity","type":"exact"},{"name":"down regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"down-regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"down-regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"down-regulation of NTP polymerase activity","type":"exact"},{"name":"down-regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"down-regulation of RNA formation factors, PF1","type":"related"},{"name":"down-regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"down-regulation of poly(A) hydrolase activity","type":"exact"},{"name":"down-regulation of poly(A) polymerase activity","type":"exact"},{"name":"down-regulation of poly(A) synthetase activity","type":"exact"},{"name":"down-regulation of poly-A polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"down-regulation of polyadenylate polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylate synthetase activity","type":"exact"},{"name":"down-regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"down-regulation of polyadenylic polymerase activity","type":"exact"},{"name":"down-regulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"down-regulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"downregulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"downregulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"downregulation of NTP polymerase activity","type":"exact"},{"name":"downregulation of RNA adenylating enzyme activity","type":"exact"},{"name":"downregulation of RNA formation factors, PF1","type":"related"},{"name":"downregulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"downregulation of poly(A) hydrolase activity","type":"exact"},{"name":"downregulation of poly(A) polymerase activity","type":"exact"},{"name":"downregulation of poly(A) synthetase activity","type":"exact"},{"name":"downregulation of poly-A polymerase activity","type":"exact"},{"name":"downregulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"downregulation of polyadenylate polymerase activity","type":"exact"},{"name":"downregulation of polyadenylate synthetase activity","type":"exact"},{"name":"downregulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"downregulation of polyadenylic polymerase activity","type":"exact"},{"name":"downregulation of polynucleotide adenylyltransferase activity","type":"exact"},{"name":"downregulation of terminal riboadenylate transferase activity","type":"exact"},{"name":"inhibition of AMP polynucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of ATP-polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of ATP:polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of ATP:polynucleotidylexotransferase activity","type":"narrow"},{"name":"inhibition of NTP polymerase activity","type":"narrow"},{"name":"inhibition of RNA adenylating enzyme activity","type":"narrow"},{"name":"inhibition of RNA formation factors, PF1","type":"related"},{"name":"inhibition of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"narrow"},{"name":"inhibition of poly(A) hydrolase activity","type":"narrow"},{"name":"inhibition of poly(A) polymerase activity","type":"narrow"},{"name":"inhibition of poly(A) synthetase activity","type":"narrow"},{"name":"inhibition of poly-A polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylate nucleotidyltransferase activity","type":"narrow"},{"name":"inhibition of polyadenylate polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylate synthetase activity","type":"narrow"},{"name":"inhibition of polyadenylic acid polymerase activity","type":"narrow"},{"name":"inhibition of polyadenylic polymerase activity","type":"narrow"},{"name":"inhibition of polynucleotide adenylyltransferase activity","type":"narrow"},{"name":"inhibition of terminal riboadenylate transferase activity","type":"narrow"},{"name":"negative regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"negative regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"negative regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"negative regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"negative regulation of NTP polymerase activity","type":"exact"},{"name":"negative regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"negative regulation of RNA formation factors, PF1","type":"related"},{"name":"negative regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"negative regulation of poly(A) hydrolase activity","type":"exact"},{"name":"negative regulation of poly(A) polymerase activity","type":"exact"},{"name":"negative regulation of poly(A) synthetase activity","type":"exact"},{"name":"negative regulation of poly-A polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"negative regulation of polyadenylate polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylate synthetase activity","type":"exact"},{"name":"negative regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"negative regulation of polyadenylic polymerase activity","type":"exact"},{"name":"negative regulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904246"}


id: FYPO:0006318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is lower than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA resection during replication fork processing","synonyms":[{"name":"decreased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"decreased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"decreased DNA resectioning during replication fork processing","type":"exact"},{"name":"decreased extent of DNA resection during replication fork processing","type":"exact"},{"name":"decreased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"},{"name":"reduced DNA resection during replication fork processing","type":"exact"}],"termid":"FYPO:0006318"}


id: PATO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/basal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal to","termid":"PATO:0002349"}


id: GO:0010601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of auxin metabolic process","termid":"GO:0090355"},{"relation_name":"positively_regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin biosynthetic process","termid":"GO:0010601"}


id: GO:1903346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["PMID:21298005","GO_REF:0000058","GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein polyglycylation","termid":"GO:1903344"},{"relation_name":"positively_regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein polyglycylation","synonyms":[{"name":"activation of protein polyglycylation","type":"narrow"},{"name":"up regulation of protein polyglycylation","type":"exact"},{"name":"up-regulation of protein polyglycylation","type":"exact"},{"name":"upregulation of protein polyglycylation","type":"exact"}],"termid":"GO:1903346"}


id: FYPO:0007805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is absent.","definition_xrefs":["PMID:31848341","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal H3-H4 dimer loading onto DNA","termid":"FYPO:0007804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000661","FYPO:0000654","FYPO:0000641","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished H3-H4 dimer loading onto DNA","synonyms":[{"name":"abolished H3-H4 dimer loading activity","type":"exact"},{"name":"abolished histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007805"}


id: PBO:0073285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 6","termid":"PBO:0073285"}


id: GO:0106363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteinyl-[protein] + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + S-methyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:21481189","PMID:24235145","PMID:22158122","PMID:25412445","GOC:sp","RHEA:66544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0008276","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine methyltransferase activity","synonyms":[{"name":"protein cysteine methylase activity","type":"exact"},{"name":"protein cysteine methyltransferase activity","type":"exact"}],"termid":"GO:0106363"}


id: PBO:0018144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family protein involved in TOR signalling Tap42 (predicted)","termid":"PBO:0018144"}


id: GO:1901674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 acetylation (obsolete GO:1901674)","synonyms":[{"name":"regulation of histone H3 acetylation at K27","type":"exact"},{"name":"regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901674"}


id: GO:0035784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of nickel cations within an organism or cell.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete nickel cation homeostasis (obsolete GO:0035784)","synonyms":[{"name":"nickel homeostasis","type":"exact"}],"termid":"GO:0035784"}


id: PR:Q9HDX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mca1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB1A11.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.04c","synonyms":[{"name":"Spom972h-mca1","type":"exact"}],"termid":"PR:Q9HDX1"}


id: PBO:0068140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 447","termid":"PBO:0068140"}


id: PBO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telomere-associated in Yarrowia lipolytica","termid":"PBO:0001487"}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: MOD:00070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-methyl-L-alanine.","definition_xrefs":["PubMed:323502","PubMed:7007074","RESID:AA0061","ChEBI:17519","PubMed:337304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-alanine","synonyms":[{"name":"(2S)-2-methylaminopropanoic acid","type":"exact"},{"name":"2-methylazanylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-alanine","type":"exact"},{"name":"N-methylalanine","type":"exact"},{"name":"N-methylated L-alanine","type":"exact"},{"name":"NMe1Ala","type":"exact"}],"termid":"MOD:00070"}


id: PATO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000882 litter size value (obsolete PATO:0000882)","termid":"PATO:0000882"}


id: FYPO:0004198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation during mitosis","synonyms":[{"name":"decreased protein breakdown during mitosis","type":"exact"},{"name":"decreased protein catabolic process during mitosis","type":"exact"},{"name":"decreased protein catabolism during mitosis","type":"exact"},{"name":"decreased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein degradation during mitotic M phase","type":"related"},{"name":"decreased protein degradation during mitotic nuclear division","type":"exact"},{"name":"reduced protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004198"}


id: PBO:0065352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 2","termid":"PBO:0065352"}


id: PBO:0086022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086022"}


id: PBO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.11","termid":"PBO:0002506"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine","termid":"GO:0044526"}


id: GO:0008988
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N6-methyladenine.","definition_xrefs":["RHEA:58728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0140098","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"rRNA (adenine-N6-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ErmC 23S rRNA methyltransferase","type":"narrow"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"gene ksgA methyltransferase","type":"narrow"},{"name":"ribonucleic acid-adenine (N(6)) methylase activity","type":"related"},{"name":"ribonucleic acid-adenine (N6) methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenine 6-methyltransferase activity","type":"related"}],"termid":"GO:0008988","terms_by_termid":{"GO:0052907":null}}


id: PBO:0068497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 82, pseudogene","termid":"PBO:0068497"}


id: GO:0043424
data:
  {"annotated_genes":["SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67858],"is_not":false,"summary":null,"term":"GO:0043424"}]},"cv_name":"molecular_function","definition":"Binding to a protein histidine kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein histidine kinase binding","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"histidine kinase binding","type":"exact"},{"name":"histidine-protein kinase binding","type":"exact"},{"name":"protein-histidine kinase binding","type":"exact"}],"termid":"GO:0043424","terms_by_termid":{"GO:0043424":null}}


id: PBO:0054218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1599","termid":"PBO:0054218"}


id: PBO:0041971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 1","termid":"PBO:0041971"}


id: PBO:0062591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 1","termid":"PBO:0062591"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["PubMed:16565085","RESID:AA0557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: GO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that activates or increases the frequency, rate or extent of host catalytic activity.","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host catalytic activity (obsolete GO:0039712)","synonyms":[{"name":"induction by virus of host enzyme activity","type":"exact"}],"termid":"GO:0039712"}


id: GO:0043006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals that leads to the upregulation of calcium-dependent phospholipase A2 activity in response to the signal.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of phospholipase A2 activity by calcium-mediated signaling (obsolete GO:0043006)","synonyms":[{"name":"activation of phospholipase A2 activity by calcium-mediated signalling","type":"exact"},{"name":"calcium-dependent activation of phospholipase A2","type":"exact"},{"name":"calcium-dependent phospholipase A2 activation","type":"exact"}],"termid":"GO:0043006"}


id: PBO:0090729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L40","termid":"PBO:0090729"}


id: PR:Q09769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Lon protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00272","PANTHER:PTHR10046:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.06c","secondary_identifiers":["UniProtKB:Q09769"],"synonyms":[{"name":"Spom972h-LONP1","type":"exact"}],"termid":"PR:Q09769"}


id: PBO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 2","termid":"PBO:0050608"}


id: PBO:0074101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 4","termid":"PBO:0074101"}


id: PBO:0075255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 8","termid":"PBO:0075255"}


id: PBO:0089614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-responsive protein Ddr48","termid":"PBO:0089614"}


id: GO:0009403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"toxin biosynthetic process","synonyms":[{"name":"toxin anabolism","type":"exact"},{"name":"toxin biosynthesis","type":"exact"},{"name":"toxin formation","type":"exact"},{"name":"toxin synthesis","type":"exact"}],"termid":"GO:0009403"}


id: PBO:0041845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent serine protein kinase","termid":"PBO:0041845"}


id: PBO:0057069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 150","termid":"PBO:0057069"}


id: GO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + KDN = diphosphate + CMP-KDN.","definition_xrefs":["PMID:11479279","PMID:8381411","ISBN:978-1-60805-067-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"keto-deoxynonulosonic acid (KDN) cytidylyltransferase activity","synonyms":[{"name":"CMP-KDN synthetase activity","type":"exact"},{"name":"cytidine 5'-monophospho-2-Keto-3-deoxy-D-glycero-D-galacto-nononic acid synthetase activity","type":"exact"}],"termid":"GO:0090633"}


id: GO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a low-density lipoprotein particle into its constituent components.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: GO:1990157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC bound to the DNA-bound DNA replication initiation protein DnaA. Essential for DNA replication initiation.","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaA-DnaB-DnaC complex","termid":"GO:1990157"}


id: PBO:0029285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleolus","termid":"PBO:0029285"}


id: SO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinuous stretch of DNA that is the combination of one or several TFRSs whose bound TFs work jointly in the regulation of a promoter. ","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_module","synonyms":[{"name":"TFRS module","type":"exact"},{"name":"TFRS phrase","type":"exact"},{"name":"transcription factor regulatory site module","type":"exact"},{"name":"transcription factor regulatory site phrase","type":"exact"}],"termid":"SO:0002296"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: GO:0021795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the cerebral cortex.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex cell migration","termid":"GO:0021795"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: GO:0032345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of aldosterone metabolic process","synonyms":[{"name":"down regulation of aldosterone metabolic process","type":"exact"},{"name":"down-regulation of aldosterone metabolic process","type":"exact"},{"name":"downregulation of aldosterone metabolic process","type":"exact"},{"name":"inhibition of aldosterone metabolic process","type":"narrow"},{"name":"negative regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032345"}


id: PBO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get2","termid":"PBO:0036499"}


id: SO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary between the spliced leader and the first exon of the mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_junction","synonyms":[{"name":"trans-splice junction","type":"exact"}],"termid":"SO:0001474"}


id: GO:0039554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of MDA-5 (also known as IFIH1). The cytoplasmic pattern recognition receptor MDA-5 detects dsRNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.","definition_xrefs":["PMID:33727702","PMID:19019954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity","secondary_identifiers":["VZ:603","GO:0039539"],"synonyms":[{"name":"Inhibition of host MDA5 by virus","type":"related"},{"name":"inhibition by virus of host MDA-5 signaling","type":"related"},{"name":"inhibition of host IFIH1/MDA5 by virus","type":"related"},{"name":"suppression by virus of host IFIH1 signaling pathway","type":"related"},{"name":"suppression by virus of host MDA-5 activity","type":"related"},{"name":"suppression by virus of host MDA-5 signaling pathway","type":"related"},{"name":"suppression by virus of host MDA-5 signalling pathway","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host MDA-5 activity","type":"narrow"}],"termid":"GO:0039554"}


id: PBO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 8","termid":"PBO:0071667"}


id: PBO:0045503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoplakin","termid":"PBO:0045503"}


id: PBO:0077857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 2","termid":"PBO:0077857"}


id: PBO:0039579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1","termid":"PBO:0039579"}


id: PBO:0012050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Las1 pre-rRNA processing protein","termid":"PBO:0012050"}


id: PBO:0057044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 133b","termid":"PBO:0057044"}


id: GO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adult salivary gland are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland morphogenesis","termid":"GO:0007437"}


id: PBO:0065885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB33B antisense RNA 1","termid":"PBO:0065885"}


id: MOD:02024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a cervonoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"cervonoylated residue","termid":"MOD:02024"}


id: PBO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 10","termid":"PBO:0043473"}


id: SO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyluridine","secondary_identifiers":["RNAMOD:068"],"synonyms":[{"name":"5-methoxycarbonylmethyluridine","type":"exact"},{"name":"five methoxycarbonylmethyluridine","type":"exact"},{"name":"mcm5U","type":"exact"}],"termid":"SO:0001360"}


id: PBO:0086414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YAR066W has a paralog, YHR214W, that arose from a segmental duplication","termid":"PBO:0086414"}


id: GO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of zinc ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to zinc ion starvation","termid":"GO:0120127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion starvation","synonyms":[{"name":"cellular response to zinc ion limitation","type":"exact"},{"name":"cellular response to zinc starvation","type":"exact"}],"termid":"GO:0034224"}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["GOC:al","PMID:3541942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: PBO:0002751
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease","termid":"PBO:0002751"}


id: PBO:0028039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_disassembly","termid":"PBO:0028039"}


id: SO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 2 bases long that is skipped during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_2_translational_frameshift","synonyms":[{"name":"plus 2 ribosomal frameshift","type":"exact"},{"name":"plus 2 translational frameshift","type":"exact"}],"termid":"SO:0001212"}


id: GO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-A subunit.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibin complex","termid":"GO:0043511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"inhibin A complex","termid":"GO:0043512"}


id: PR:Q9UT75
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA dimethylallyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00683","PANTHER:PTHR11088:SF21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dimethylallyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.15","secondary_identifiers":["UniProtKB:Q9UT75"],"synonyms":[{"name":"IPP transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IPTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TRIT1","type":"exact"},{"name":"isopentenyl-diphosphate: tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA isopentenyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT75"}


id: PBO:0052055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANTR integral membrane protein","termid":"PBO:0052055"}


id: SO:0000615
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminator signal for RNA polymerase III transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_terminator","termid":"SO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminator_of_type_2_RNApol_III_promoter","synonyms":[{"name":"terminator of type 2 RNApol III promoter","type":"exact"}],"termid":"SO:0000615"}


id: PBO:0078378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 2","termid":"PBO:0078378"}


id: PBO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCTN1 antisense RNA 1","termid":"PBO:0044650"}


id: GO:0052016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of glucan molecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host glucan (obsolete GO:0052016)","synonyms":[{"name":"catabolism by organism of host glucan","type":"exact"}],"termid":"GO:0052016"}


id: PBO:0011417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_expressivity","termid":"PBO:0011417"}


id: PBO:0076549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 1","termid":"PBO:0076549"}


id: PBO:0089023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPATCH11 ortholog","termid":"PBO:0089023"}


id: GO:0044436
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a thylakoid, a sac-like vesicle that bears the photosynthetic pigments in photosynthetic organisms.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid part (obsolete GO:0044436)","termid":"GO:0044436"}


id: PBO:0057817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3137","termid":"PBO:0057817"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_01707","SJAG_00483","SJAG_00095","SJAG_04933","SJAG_04353","SJAG_01151","SJAG_00159","SJAG_03118","SJAG_00139","SJAG_01610","SJAG_00448","SJAG_02691"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71504,76895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[71185,70030,77587,75146,77568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[75419,77271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[78033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[75218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_02691":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0001139":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0106237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12R,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["GOC:gap","PMID:10100631","PMID:11256953","RHEA:41336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 12(R)-lipoxygenase activity","termid":"GO:0106237"}


id: PBO:0087851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transaldolase of unknown function; transcription is repressed by Mot1p and induced by alpha-factor and during diauxic shift; NQM1 has a paralog, TAL1, that arose from the whole genome duplication","termid":"PBO:0087851"}


id: GO:0030118
data:
  {"annotated_genes":["SJAG_01809","SJAG_04931","SJAG_04609","SJAG_02282","SJAG_02805","SJAG_02177","SJAG_04517","SJAG_04644","SJAG_00379","SJAG_00800","SJAG_00104","SJAG_04565","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97202,108837,109055,114883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[107648,104395,107707,92362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[107550],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030131"},{"annotations":[90990,108959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030130"},{"annotations":[90991],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071439"},{"annotations":[114501,110929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes.","definition_xrefs":["PMID:9531549","GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane coat","termid":"GO:0030117"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"clathrin coat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016190","NIF_Subcellular:sao879919129","Wikipedia:Clathrin"],"synonyms":[{"name":"clathrin cage","type":"exact"}],"termid":"GO:0030118","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030131":null,"GO:0071439":null}}


id: GO:0010469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a signaling receptor activity. Receptor activity is when a molecule combines with an extracellular or intracellular messenger to initiate a change in cell activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of signaling receptor activity","synonyms":[{"name":"regulation of receptor activity","type":"broad"},{"name":"regulation of signalling receptor activity","type":"exact"}],"termid":"GO:0010469"}


id: PBO:0068389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF207 antisense RNA 1","termid":"PBO:0068389"}


id: GO:1901904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrocidine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:9352938","UniPathway:UPA00180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine biosynthetic process","synonyms":[{"name":"tyrocidine anabolism","type":"exact"},{"name":"tyrocidine biosynthesis","type":"exact"},{"name":"tyrocidine formation","type":"exact"},{"name":"tyrocidine synthesis","type":"exact"}],"termid":"GO:1901904"}


id: PBO:0044108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated 62","termid":"PBO:0044108"}


id: PBO:0065219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 2","termid":"PBO:0065219"}


id: PBO:0038783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacylase 1","termid":"PBO:0038783"}


id: PBO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Random Septum Postioning","termid":"PBO:0003652"}


id: PBO:0108605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_characteristic","termid":"PBO:0108605"}


id: GO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somitogenesis","secondary_identifiers":["Wikipedia:Somitogenesis"],"synonyms":[{"name":"formation of mesodermal clusters","type":"exact"}],"termid":"GO:0001756"}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: GO:0048198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cytosolic coat proteins fit together in a basketlike convex framework to form a coated deformed region on the cytoplasmic surface of the membrane. The deformed region forms into a complete vesicle and is released.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"Golgi vesicle budding","termid":"GO:0048194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"Golgi vesicle bud deformation and release","synonyms":[{"name":"Golgi-derived vesicle bud deformation and release","type":"exact"},{"name":"dictyosome vesicle bud deformation","type":"narrow"}],"termid":"GO:0048198"}


id: GO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol + NADP+ = 2-trans,6-trans-farnesal + H+ + NADPH.","definition_xrefs":["RHEA:14697","EC:1.1.1.216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"farnesol dehydrogenase activity","secondary_identifiers":["MetaCyc:FARNESOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03264"],"synonyms":[{"name":"2-trans,6-trans-farnesol:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-farnesol dehydrogenase activity","type":"related"},{"name":"farnesol (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047886"}


id: PBO:0038711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 6","termid":"PBO:0038711"}


id: GO:0039723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.","definition_xrefs":["PMID:34084167","PMID:22171259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","secondary_identifiers":["VZ:4477"],"synonyms":[{"name":"inhibition of host TBK1 by virus","type":"related"},{"name":"suppression by virus of host TBK1 activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity","type":"narrow"}],"termid":"GO:0039723"}


id: PBO:0058985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT6, PHD finger containing","termid":"PBO:0058985"}


id: PBO:0083871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; required for turnover of histone H3 variant Cse4p","termid":"PBO:0083871"}


id: GO:1903187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:19467235","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"negatively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitellogenesis","synonyms":[{"name":"down regulation of vitellogenesis","type":"exact"},{"name":"down regulation of yolk production","type":"exact"},{"name":"down-regulation of vitellogenesis","type":"exact"},{"name":"down-regulation of yolk production","type":"exact"},{"name":"downregulation of vitellogenesis","type":"exact"},{"name":"downregulation of yolk production","type":"exact"},{"name":"inhibition of vitellogenesis","type":"narrow"},{"name":"inhibition of yolk production","type":"narrow"},{"name":"negative regulation of yolk production","type":"exact"}],"termid":"GO:1903187"}


id: PBO:0072314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26","termid":"PBO:0072314"}


id: SO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small ribosomal subunit RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript","termid":"SO:0000209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_small_subunit_primary_transcript","synonyms":[{"name":"rRNA small subunit primary transcript","type":"exact"}],"termid":"SO:0000255"}


id: PBO:0063664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins inositol deacylase 1","termid":"PBO:0063664"}


id: PATO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tendency","termid":"PATO:0002362"}


id: PBO:0087106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1B has a paralog, RPS1A, that arose from the whole genome duplication","termid":"PBO:0087106"}


id: GO:1905309
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cohesin loading.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cohesin loading","termid":"GO:0071922"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to chromatin","termid":"GO:0120187"},{"relation_name":"positively_regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cohesin association with chromatin","type":"exact"},{"name":"positive regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:1905309","terms_by_termid":{"GO:1905406":null}}


id: GO:0042392
data:
  {"annotated_genes":["SJAG_04986"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96322],"is_not":false,"summary":null,"term":"GO:0042392"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine 1-phosphate + H2O = sphingosine + phosphate.","definition_xrefs":["PMID:8663293","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid phosphatase activity","termid":"GO:0042577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04986":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN3DJ-25","Reactome:R-HSA-428696","RHEA:27518","Reactome:R-HSA-428664","Reactome:R-HSA-428690"],"synonyms":[{"name":"SPP phosphatase activity","type":"exact"},{"name":"SPPase activity","type":"exact"},{"name":"sphingosine-1-phosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0042392","terms_by_termid":{"GO:0042392":null}}


id: PATO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An emergent molecular quality that arises by virtue of the bearer's disposition to exhibit molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesivity","synonyms":[{"name":"adhesiveness","type":"exact"},{"name":"stickiness","type":"related"}],"termid":"PATO:0001431"}


id: GO:0009046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of the D-alanyl-D-alanine bond in (Ac)2-L-lysyl-D-alanyl-D-alanine.","definition_xrefs":["EC:3.4.17.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"zinc D-Ala-D-Ala carboxypeptidase activity","secondary_identifiers":["MetaCyc:3.4.17.14-RXN"],"synonyms":[{"name":"D-alanyl-D-alanine hydrolase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving carboxypeptidase activity","type":"related"},{"name":"DD-carboxypeptidase","type":"broad"},{"name":"DD-carboxypeptidase-transpeptidase activity","type":"related"},{"name":"G enzyme","type":"related"},{"name":"Zn(2+) G peptidase activity","type":"related"},{"name":"Zn2+ G peptidase activity","type":"related"}],"termid":"GO:0009046"}


id: GO:0018966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving styrene, an aromatic hydrocarbon liquid soluble in ether and alcohol. When heated, exposed to light or added to a peroxide catalyst, it undergoes polymerization to form polystyrene, a versatile material used in the manufacture of plastics, synthetic rubber, thermal insulation, and packaging. Styrene is a classified mutagen and a suspected carcinogen.","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:sty"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"styrene metabolic process","synonyms":[{"name":"styrene metabolism","type":"exact"}],"termid":"GO:0018966"}


id: FYPO:0004911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutathione into the vacuole does not occur.","definition_xrefs":["GO:0071996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished glutathione import into vacuole","synonyms":[{"name":"abolished glutathione import into vacuole during mitotic cell cycle","type":"related"},{"name":"abolished glutathione import into vacuole during vegetative growth","type":"exact"},{"name":"abolished glutathione transmembrane import into vacuole","type":"exact"},{"name":"glutathione import into vacuole abolished","type":"exact"}],"termid":"FYPO:0004911"}


id: PBO:0085819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0085819"}


id: GO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Leu-Xaa, Met-Xaa and Phe-Xaa. Hydrolyzes elastin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase II activity (obsolete GO:0004281)","synonyms":[{"name":"pancreatic elastase 2","type":"related"},{"name":"pancreatic elastase II activity","type":"exact"}],"termid":"GO:0004281"}


id: PBO:0075162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 18","termid":"PBO:0075162"}


id: GO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2.","definition_xrefs":["PMID:11483596","PMID:12440767","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NADPH oxidase complex","synonyms":[{"name":"flavocytochrome b558","type":"narrow"},{"name":"respiratory-burst oxidase","type":"related"}],"termid":"GO:0043020"}


id: PBO:0085852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO); YOR305W is not an essential gene","termid":"PBO:0085852"}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: PATO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Overlap with quality inhering in a bearer by virtue of the bearer's being positioned under another entity so as to be covered by some portion of it.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlap with","termid":"PATO:0001590"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapped by","termid":"PATO:0002489"}


id: GO:0019660
data:
  {"annotated_genes":["SJAG_03370","SJAG_01414","SJAG_03743","SJAG_03822","SJAG_00240","SJAG_04495","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94096],"is_not":false,"summary":null,"term":"GO:0019660"},{"annotations":[110664,94815,110663,84661,94814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[92675],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Fermentation that includes the anaerobic conversion of glucose to pyruvate via the glycolytic pathway.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04495":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Pyruvate-Degradation"],"termid":"GO:0019660","terms_by_termid":{"GO:0019655":null,"GO:0019660":null,"GO:2001172":null}}


id: PBO:0083670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein of unknown function; physically interacts with Hsp82p; YPL264C is not an essential gene","termid":"PBO:0083670"}


id: GO:0032671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27 production","secondary_identifiers":["GO:0045531"],"synonyms":[{"name":"regulation of IL-27 production","type":"exact"},{"name":"regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-27 formation","type":"narrow"},{"name":"regulation of interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032671"}


id: PATO:0001306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"temperature","termid":"PATO:0000146"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased temperature","secondary_identifiers":["PATO:0000677"],"synonyms":[{"name":"cold","type":"exact"},{"name":"low temperature","type":"exact"}],"termid":"PATO:0001306"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["EC:2.8.2.9","RHEA:19977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["GO:0008128","KEGG_REACTION:R04213","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: PBO:0079885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 2","termid":"PBO:0079885"}


id: MOD:00033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two or more amino acid residues with covalent bonds.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues","synonyms":[{"name":"XLNK-Res-Res","type":"exact"}],"termid":"MOD:00033"}


id: PBO:0027742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_camptothecin","termid":"PBO:0027742"}


id: PBO:0079230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 7A","termid":"PBO:0079230"}


id: PBO:0080485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 5A","termid":"PBO:0080485"}


id: PBO:0048999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 1","termid":"PBO:0048999"}


id: PBO:0065751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYDC2 antisense RNA 1","termid":"PBO:0065751"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: PBO:0041549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 54","termid":"PBO:0041549"}


id: GO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagina development","termid":"GO:0060068"}


id: GO:0010041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(III) ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron(III) ion","synonyms":[{"name":"response to iron(III)","type":"exact"}],"termid":"GO:0010041"}


id: PBO:0067209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 274, pseudogene","termid":"PBO:0067209"}


id: PATO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinated","termid":"PATO:0000769"}


id: GO:0019202
data:
  {"annotated_genes":["SJAG_03457","SJAG_00881","SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[106738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to an amino acid substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00881":null,"SJAG_03141":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"amino acid kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019202","terms_by_termid":{"GO:0004072":null,"GO:0004349":null,"GO:0004413":null}}


id: GO:0061211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a collecting duct in the mesonephros over time, from its formation to the mature structure. The collecting duct regulates water, electrolyte and acid-base balance. The collecting duct is the final common path through which urine flows before entering the ureter and then emptying into the bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collecting duct development","termid":"GO:0072044"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric collecting duct development","termid":"GO:0061211"}


id: GO:0071194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP3 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kv4.2-KChIP3 channel complex","secondary_identifiers":["CORUM:608"],"termid":"GO:0071194"}


id: PR:P87138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.07c gene.","definition_xrefs":["UniProtKB:P87138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.07c","synonyms":[{"name":"Spom972h-SPAC57A7.07c","type":"exact"}],"termid":"PR:P87138"}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicarbonate transport","synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: PBO:0078576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 52","termid":"PBO:0078576"}


id: PBO:0077661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10b","termid":"PBO:0077661"}


id: PBO:0086568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YOR029W is not an essential gene","termid":"PBO:0086568"}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: PBO:0080935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 1","termid":"PBO:0080935"}


id: PR:O74947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.10","synonyms":[{"name":"Spom972h-SPCC553.10","type":"exact"}],"termid":"PR:O74947"}


id: GO:0019212
data:
  {"annotated_genes":["SJAG_04627","SJAG_02380","SJAG_03272","SJAG_04999","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85518,86411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[95518,84017,107434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019212","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: GO:2000552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of type 2 immune response","termid":"GO:0002829"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"negatively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"negative regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000552"}


id: PR:O14125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A11.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C3A11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.11c","synonyms":[{"name":"Spom972h-SPAC3A11.11c","type":"exact"}],"termid":"PR:O14125"}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: GO:0102685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + trans-zeatin = H+ + trans-zeatin-7-N-glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:trans-zeatin 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4721"],"termid":"GO:0102685"}


id: PBO:0034767
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ARPC1A","termid":"PBO:0034767"}


id: PBO:0040896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 2","termid":"PBO:0040896"}


id: GO:1903635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:2280766"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of leucine-tRNA ligase activity (obsolete GO:1903635)","synonyms":[{"name":"activation of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"activation of leucine translase activity","type":"narrow"},{"name":"activation of leucine-tRNA ligase activity","type":"narrow"},{"name":"activation of leucine-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"activation of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"positive regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"positive regulation of leucine translase activity","type":"exact"},{"name":"positive regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"positive regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up regulation of leucine translase activity","type":"exact"},{"name":"up regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"up-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"up-regulation of leucine translase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"up-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"up-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"upregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"upregulation of leucine translase activity","type":"exact"},{"name":"upregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"upregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"upregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903635"}


id: PBO:0085173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-mannosylated heat shock protein; secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation; HSP150 has a paralog, PIR3, that arose from the whole genome duplication","termid":"PBO:0085173"}


id: PBO:0003198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Meu6","termid":"PBO:0003198"}


id: PBO:0034037
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_abstract","termid":"PBO:0034037"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: PBO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 8","termid":"PBO:0045729"}


id: GO:1905152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:24198377","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated sodium channel activity","termid":"GO:1905150"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity","synonyms":[{"name":"activation of voltage gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-dependent sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive sodium channel","type":"narrow"},{"name":"positive regulation of voltage gated sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up-regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"upregulation of voltage gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905152"}


id: GO:0031476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing one or more class VI myosin heavy chains and associated light chains. Myosin VI has a single IQ motif in the neck and a tail region with a coiled coil domain followed by a unique globular domain; a unique insertion that enables myosin VI to move towards the pointed or minus end of actin filaments.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin VI complex","termid":"GO:0031476"}


id: PBO:0068711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 92, pseudogene","termid":"PBO:0068711"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: GO:0090402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oncogene-induced cell senescence","synonyms":[{"name":"OIS","type":"exact"}],"termid":"GO:0090402"}


id: GO:0021852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex.","definition_xrefs":["PMID:22192824","GO_REF:0000021","GOC:cls","PMID:12626695","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"},{"relation_name":"is_a","term_name":"radial glia-guided pyramidal neuron migration","termid":"GO:0140650"},{"relation_name":"part_of","term_name":"pyramidal neuron development","termid":"GO:0021860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron migration to cerebral cortex","synonyms":[{"name":"projection neuron migration","type":"related"},{"name":"pyramidal neuron migration","type":"broad"}],"termid":"GO:0021852"}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["UniProtKB:Q9P6P9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: PBO:0074586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3B","termid":"PBO:0074586"}


id: PBO:0076624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E like","termid":"PBO:0076624"}


id: PBO:0017923
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damage Responsive Protein","termid":"PBO:0017923"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: PBO:0088918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine acetyltransferase Rtt109","termid":"PBO:0088918"}


id: GO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + pelargonidin 3-O-(6-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside = CoA + 4'''-demalonylsalvianin.","definition_xrefs":["EC:2.3.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.172-RXN","RHEA:21988"],"synonyms":[{"name":"Ss5MaT1","type":"related"},{"name":"malonyl-CoA:pelargonidin-3-O-(6-caffeoyl-beta-D-glucoside)-5-O-beta-D-glucoside 6'''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033810"}


id: PBO:0056622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 4","termid":"PBO:0056622"}


id: PBO:0111647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 I prime and Rpd3L histone deacetylase complex subunit Pst1","termid":"PBO:0111647"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: PBO:0028657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028657"}


id: GO:1902331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA strand elongation that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand elongation involved in bacterial-type DNA replication (obsolete GO:1902331)","termid":"GO:1902331"}


id: PBO:0108965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1B","termid":"PBO:0108965"}


id: PBO:0041882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 1","termid":"PBO:0041882"}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: GO:0120511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-farnesoate + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + juvenile hormone III + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:38741075","RHEA:43728","PMID:23586995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methyl farnesoate epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11621","EC:1.14.14.127"],"synonyms":[{"name":"CYP15A1 activity","type":"related"}],"termid":"GO:0120511"}


id: PBO:0077501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 219","termid":"PBO:0077501"}


id: GO:0097402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["GOC:jc","PMID:15543145","CL:0000031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast migration","termid":"GO:0097402"}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["EC:5.3.1.14","RHEA:23160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["MetaCyc:RHAMNISOM-RXN","KEGG_REACTION:R02437"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0090966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GAP Gyp10","termid":"PBO:0090966"}


id: PBO:0054078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1428","termid":"PBO:0054078"}


id: PBO:0045025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 3","termid":"PBO:0045025"}


id: FYPO:0004493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division to produce daughter cells that are smaller than normal, which then die.","definition_xrefs":["PMID:8367300","PomBase:vw","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, small cell","synonyms":[{"name":"inviable after spore germination, single cell division, decreased cell size","type":"exact"},{"name":"inviable after spore germination, single cell division, reduced cell size","type":"exact"},{"name":"inviable following spore germination, single cell division, small cell","type":"exact"},{"name":"inviable germinated spore, single cell division, small cell","type":"exact"},{"name":"lethal after spore germination, single cell division, small cell","type":"exact"}],"termid":"FYPO:0004493"}


id: PBO:0062946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 4","termid":"PBO:0062946"}


id: GO:1902498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:TermGenie","GOC:rb","PMID:24069405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein autoubiquitination","synonyms":[{"name":"regulation of protein auto-ubiquitination","type":"exact"},{"name":"regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"regulation of protein autoubiquitinylation","type":"exact"},{"name":"regulation of protein self-ubiquitination","type":"exact"},{"name":"regulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902498"}


id: PBO:0045551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUSP5 divergent transcript","termid":"PBO:0045551"}


id: PBO:0028405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_medial_cortex_during_vegetative_growth","termid":"PBO:0028405"}


id: PBO:0079389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 1","termid":"PBO:0079389"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: PBO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 23","termid":"PBO:0046581"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"lipopolysaccharide core region metabolic process","termid":"GO:0046401"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide core region biosynthetic process","synonyms":[{"name":"LPS core region biosynthetic process","type":"exact"},{"name":"lipopolysaccharide core region anabolism","type":"exact"},{"name":"lipopolysaccharide core region biosynthesis","type":"exact"},{"name":"lipopolysaccharide core region formation","type":"exact"},{"name":"lipopolysaccharide core region synthesis","type":"exact"}],"termid":"GO:0009244"}


id: GO:0061226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the mesonephros. The proximal/distal axis is defined by a line that runs from the glomerulus (proximal end) outward toward the mesonephric duct (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in mesonephric nephron development","termid":"GO:0061226"}


id: PBO:0011183
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approver_email","termid":"PBO:0011183"}


id: GO:0031620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation.","definition_xrefs":["GOC:dph","GOC:add","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of heat generation","termid":"GO:0031650"},{"relation_name":"regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fever generation","synonyms":[{"name":"regulation of pyrexia","type":"exact"}],"termid":"GO:0031620"}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0046058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit I","termid":"PBO:0046058"}


id: GO:1904303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GOC:TermGenie","PMID:1849751","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of maternal process involved in parturition","synonyms":[{"name":"activation of maternal process involved in parturition","type":"narrow"},{"name":"up regulation of maternal process involved in parturition","type":"exact"},{"name":"up-regulation of maternal process involved in parturition","type":"exact"},{"name":"upregulation of maternal process involved in parturition","type":"exact"}],"termid":"GO:1904303"}


id: FYPO:0000881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000881"}


id: PBO:0074774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3G","termid":"PBO:0074774"}


id: PBO:0039847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 15","termid":"PBO:0039847"}


id: PBO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 1","termid":"PBO:0044027"}


id: PR:Q09100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rnp24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnp24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.04","synonyms":[{"name":"Spom972h-rnp24","type":"exact"}],"termid":"PR:Q09100"}


id: FYPO:0005036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"protein phosphorylation abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005036"}


id: PBO:0045015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2C antisense RNA 1","termid":"PBO:0045015"}


id: PBO:0018131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1 (predicted)","termid":"PBO:0018131"}


id: PBO:0077908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein, translationally-controlled 1","termid":"PBO:0077908"}


id: MOD:00158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tryptophan residues by a carbon-carbon bond to form 4'-(L-tryptophan)-L-tryptophyl quinone.","definition_xrefs":["DeltaMass:0","PubMed:2028257","RESID:AA0149","ChEBI:20251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-(L-tryptophan)-L-tryptophyl quinone","synonyms":[{"name":"2,4-BisTrp-6,7-dione (from Tryptophan)","type":"exact"},{"name":"2-amino-3-[2-[2-amino-3-(2-carboxyethyl)-6,7-dioxo-1H-indol-4-yl]-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"3-[(2S)-2-amino-2-carboxyethyl]-4-(3-[(2S)-2-amino-2-carboxyethyl]-1H-indol-2-yl)-6,7-indolinedione","type":"exact"},{"name":"4'-tryptophan-tryptophylquinone","type":"exact"},{"name":"4-(2'-tryptophyl)tryptophan-6,7-dione","type":"exact"},{"name":"4-(L-tryptophan-2-yl)-L-tryptophyl quinone","type":"exact"},{"name":"CROSSLNK Tryptophan tryptophylquinone (Trp-Trp)","type":"exact"},{"name":"TTQ","type":"exact"},{"name":"XLNK-4'Trp-TrpQ","type":"exact"},{"name":"alpha,alpha'-diamino-6',7'-dihydro-6',7'-dioxo-(2,4'-bi-1H-indole)-3,3'-dipropanoic acid","type":"exact"}],"termid":"MOD:00158"}


id: PR:O43090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C947.15c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.15c","secondary_identifiers":["UniProtKB:O43090"],"synonyms":[{"name":"Spom972h-ndh","type":"exact"}],"termid":"PR:O43090"}


id: GO:0047347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + NDP = phosphate + NDP-aldose.","definition_xrefs":["EC:2.7.7.37","MetaCyc:2.7.7.37-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"aldose-1-phosphate nucleotidyltransferase activity","synonyms":[{"name":"NDP sugar phosphorylase activity","type":"related"},{"name":"NDP-aldose phosphorylase activity","type":"related"},{"name":"NDP-sugar phosphorylase activity","type":"broad"},{"name":"NDP:aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDP:alpha-D-aldose-1-phosphate nucleotidyltransferase activity","type":"related"},{"name":"NDPaldose phosphorylase activity","type":"related"},{"name":"glucose 1-phosphate inosityltransferase activity","type":"related"},{"name":"nucleoside diphosphate sugar:orthophosphate nucleotidyltransferase activity","type":"related"},{"name":"nucleoside diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar nucleotide phosphorylase activity","type":"related"},{"name":"sugar phosphate nucleotidyltransferase activity","type":"related"},{"name":"sugar-1-phosphate nucleotidyltransferase activity","type":"broad"}],"termid":"GO:0047347"}


id: GO:0009034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + H2O = indole + NH4 + pyruvate.","definition_xrefs":["RHEA:19553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tryptophanase activity","secondary_identifiers":["EC:4.1.99.1","MetaCyc:TRYPDEG-PWY","MetaCyc:TRYPTOPHAN-RXN","KEGG_REACTION:R00673"],"synonyms":[{"name":"L-tryptophan indole-lyase (deaminating) activity","type":"related"},{"name":"L-tryptophan indole-lyase (deaminating; pyruvate forming) activity","type":"related"},{"name":"L-tryptophan indole-lyase activity","type":"related"},{"name":"L-tryptophanase activity","type":"related"},{"name":"TNase activity","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"related"},{"name":"tryptophan catabolism, using tryptophanase","type":"related"}],"termid":"GO:0009034"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: PBO:0062762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 2 pseudogene","termid":"PBO:0062762"}


id: PBO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_sister_chromatid_segregation","termid":"PBO:0031787"}


id: PBO:0089114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import/export signal receptor","termid":"PBO:0089114"}


id: GO:1903452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.","definition_xrefs":["PMID:24088570","GO_REF:0000058","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of G1 to G0 transition","termid":"GO:1903450"},{"relation_name":"positively_regulates","term_name":"G1 to G0 transition","termid":"GO:0070314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of G1 to G0 transition","synonyms":[{"name":"activation of G1 to G0 transition","type":"narrow"},{"name":"activation of G1/G0 transition","type":"narrow"},{"name":"activation of cell cycle quiescence","type":"related"},{"name":"activation of establishment of cell quiescence","type":"narrow"},{"name":"activation of stationary phase","type":"related"},{"name":"positive regulation of G1/G0 transition","type":"exact"},{"name":"positive regulation of cell cycle quiescence","type":"related"},{"name":"positive regulation of establishment of cell quiescence","type":"exact"},{"name":"positive regulation of stationary phase","type":"related"},{"name":"up regulation of G1 to G0 transition","type":"exact"},{"name":"up regulation of G1/G0 transition","type":"exact"},{"name":"up regulation of cell cycle quiescence","type":"related"},{"name":"up regulation of establishment of cell quiescence","type":"exact"},{"name":"up regulation of stationary phase","type":"related"},{"name":"up-regulation of G1 to G0 transition","type":"exact"},{"name":"up-regulation of G1/G0 transition","type":"exact"},{"name":"up-regulation of cell cycle quiescence","type":"related"},{"name":"up-regulation of establishment of cell quiescence","type":"exact"},{"name":"up-regulation of stationary phase","type":"related"},{"name":"upregulation of G1 to G0 transition","type":"exact"},{"name":"upregulation of G1/G0 transition","type":"exact"},{"name":"upregulation of cell cycle quiescence","type":"related"},{"name":"upregulation of establishment of cell quiescence","type":"exact"},{"name":"upregulation of stationary phase","type":"related"}],"termid":"GO:1903452"}


id: PBO:0054048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1389","termid":"PBO:0054048"}


id: PBO:0091019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multispanning membrane protein, CTNS/PQ domain protein","termid":"PBO:0091019"}


id: PBO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 21","termid":"PBO:0060033"}


id: PBO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf111","termid":"PBO:0000622"}


id: GO:0098836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the cytoskeleton that lies within a dendritic spine. The actin component of this cytoskeleton is involved in spine head remodeling in response to postsynaptic signaling.","definition_xrefs":["PMID:24854120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoskeleton of dendritic spine","termid":"GO:0098836"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction","termid":"GO:0075133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075135"}


id: GO:1900267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of substance P receptor binding","termid":"GO:1900265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of substance P receptor binding","synonyms":[{"name":"activation of neurokinin-1 receptor binding","type":"exact"},{"name":"activation of substance P receptor binding","type":"narrow"},{"name":"activation of substance P receptor ligand","type":"narrow"},{"name":"positive regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"positive regulation of substance P receptor ligand","type":"narrow"},{"name":"up regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up regulation of substance P receptor binding","type":"exact"},{"name":"up regulation of substance P receptor ligand","type":"narrow"},{"name":"up-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor ligand","type":"narrow"},{"name":"upregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"upregulation of substance P receptor binding","type":"exact"},{"name":"upregulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900267"}


id: GO:1900827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane depolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1900827"}


id: GO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to folic acid","synonyms":[{"name":"response to folate","type":"exact"},{"name":"response to vitamin B9","type":"exact"}],"termid":"GO:0071231"}


id: GO:1904489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in regulation of reactive oxygen species metabolic process.","definition_xrefs":["GOC:kmv","GO_REF:0000063","GOC:TermGenie","PMID:25961505"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904489)","synonyms":[{"name":"regulation of ROS metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of ROS metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolic process by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of reactive oxygen species metabolism by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904489"}


id: PBO:0091786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA poly(A)-bearing Prl89","termid":"PBO:0091786"}


id: GO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an AV node cell with a bundle of His cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0098631","GO:0005488"],"is_obsolete":false,"name":"cell adhesive protein binding involved in AV node cell-bundle of His cell communication","synonyms":[{"name":"cell adhesive protein binding involved in atrioventricular node cell-bundle of His cell communication","type":"exact"}],"termid":"GO:0086082"}


id: GO:0051301
data:
  {"annotated_genes":["SJAG_03295","SJAG_04850","SJAG_04943","SJAG_04781","SJAG_02657","SJAG_04703","SJAG_03508","SJAG_01769","SJAG_02222","SJAG_02169","SJAG_00310","SJAG_03374","SJAG_01889","SJAG_02838","SJAG_03592","SJAG_05290","SJAG_04851","SJAG_04412","SJAG_02700","SJAG_02380","SJAG_03342","SJAG_04358","SJAG_01790","SJAG_00996","SJAG_01215","SJAG_04982","SJAG_04912","SJAG_02864","SJAG_04690","SJAG_00442","SJAG_03704","SJAG_03936","SJAG_05285","SJAG_02022","SJAG_03915","SJAG_02215","SJAG_04666","SJAG_02592","SJAG_00663","SJAG_01386","SJAG_01774","SJAG_00256","SJAG_03379","SJAG_03692","SJAG_01863","SJAG_01453","SJAG_00082","SJAG_02514","SJAG_03564","SJAG_03264","SJAG_03353","SJAG_01894","SJAG_00845","SJAG_04938","SJAG_04077","SJAG_03011","SJAG_01787","SJAG_01837","SJAG_03025","SJAG_04498","SJAG_01665","SJAG_03887","SJAG_01143","SJAG_03581","SJAG_01277","SJAG_03631","SJAG_00228","SJAG_05179","SJAG_01943","SJAG_04375","SJAG_03123","SJAG_03596","SJAG_02753","SJAG_00807","SJAG_00667","SJAG_01732","SJAG_00229","SJAG_02431","SJAG_04551","SJAG_04776","SJAG_04470","SJAG_02916","SJAG_02645","SJAG_04621","SJAG_03688","SJAG_04455","SJAG_03088","SJAG_02831","SJAG_00526","SJAG_01456","SJAG_03045","SJAG_03681","SJAG_01188","SJAG_03309","SJAG_03444","SJAG_00700","SJAG_03048","SJAG_06270","SJAG_00514","SJAG_04597","SJAG_00883","SJAG_04887","SJAG_04001","SJAG_00279","SJAG_02807","SJAG_01114","SJAG_00938","SJAG_01805","SJAG_04930","SJAG_00268","SJAG_04468","SJAG_03703","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[85465,94130,94385,104201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[106864,101201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[115160,85236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030995"},{"annotations":[102069,90604,112019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061640"},{"annotations":[85863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000917"},{"annotations":[87400,95841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[113072,84418,91388,94131,98641,93747,114472,93823,115119,73835,94021,88428,88687,98504,88641,104203,94986,107930,113897,114650,108364,97339],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[94132],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[113898,84419,94133,108365,91389,93748,94987,98505,97009,96777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[97038,95371,99998,78713,94388,93997,99339,108823,112234,114978,87401,91390,113899,102260,94022,96192,93749,108366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000281"},{"annotations":[92419,115306,106828,84433,104916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[95372,100723,103108,97010,98719,109140,102179,102163,104678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[95748],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010974"},{"annotations":[98449],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99779],"is_not":false,"rel_names":["regulates","part_of","negatively_regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98450,98224],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[98454],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[89561,86851,87832,97350,101091,89021,91747,103298,95669,103608,106237,88939,111951,95749],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[90512,86130],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[109423,90513,106587,90681,83693],"is_not":false,"rel_names":["part_of","positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[89906,86131],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903490"},{"annotations":[99782,86893,106830,115307,91957],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[86002,89907,113910,102439,85378,101233,111512,88520,109424,103110],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[83694,90516,88521],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[110437,102164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[85866,96224,96225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030994"},{"annotations":[106865,88429,114651],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[77030],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031991"},{"annotations":[90478,89913,115477],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[87944,109426,113544,105277,111513,85948,86136,112728,114701,99571,83696],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[107432,97462,84016],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[113911],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[104022],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905391"},{"annotations":[111867],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"},{"annotations":[91770,98334,83609,88263,107512,111689,106705,98323,98333],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000920"}]},"cv_name":"biological_process","definition":"The process resulting in division and partitioning of components of a cell to form more cells; may or may not be accompanied by the physical separation of a cell into distinct, individually membrane-bounded daughter cells.","definition_xrefs":["GOC:go_curators","GOC:pr","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24699070":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["Wikipedia:Cell_division"],"termid":"GO:0051301","terms_by_termid":{"GO:0000281":null,"GO:0000915":null,"GO:0000917":null,"GO:0000920":null,"GO:0010974":null,"GO:0030994":null,"GO:0030995":null,"GO:0031030":null,"GO:0031671":null,"GO:0031991":null,"GO:0044837":null,"GO:0061640":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904498":null,"GO:1905391":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01079"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: SO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region where transcription factor binding sites are clustered to regulate various aspects of transcription activities. (CRMs can be located a few kb to hundreds of kb upstream of the core promoter, in the coding sequence, within introns, or in the untranslated regions (UTR) sequences, and even on a different chromosome). A single gene can be regulated by multiple CRMs to give precise control of its spatial and temporal expression. CRMs function as nodes in large, intertwined regulatory network. CRM DNA accessibility is subject to regulation by dbTFs and transcription co-TFs.","definition_xrefs":["SO:SG","PMID:19660565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_regulatory_module","synonyms":[{"name":"CRM","type":"exact"},{"name":"TF module","type":"exact"},{"name":"cis regulatory module","type":"exact"},{"name":"transcription factor module","type":"exact"}],"termid":"SO:0000727"}


id: PBO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 44","termid":"PBO:0070673"}


id: GO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle fusion","termid":"GO:0031338"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031630"}


id: FYPO:0000825
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115546,115544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115547,115545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0000910","FYPO:0001247","FYPO:0002936"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation during vegetative growth","type":"related"},{"name":"RNA accumulation: increased during vegetative growth","type":"related"},{"name":"increased RNA accumulation during vegetative growth","type":"related"},{"name":"increased RNA level during mitotic cell cycle","type":"related"},{"name":"increased cellular RNA level during vegetative growth","type":"exact"},{"name":"increased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA accumulation during vegetative growth","type":"related"},{"name":"increased mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"increased messenger RNA level during vegetative growth","type":"narrow"},{"name":"increased transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0000825","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null}}


id: PBO:0067214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 280, pseudogene","termid":"PBO:0067214"}


id: PBO:0043486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consortin, connexin sorting protein","termid":"PBO:0043486"}


id: PBO:0047651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 7","termid":"PBO:0047651"}


id: PBO:0059019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 8","termid":"PBO:0059019"}


id: GO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-21 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-21 receptor binding","synonyms":[{"name":"IL-21","type":"narrow"},{"name":"interleukin-21 receptor ligand","type":"narrow"}],"termid":"GO:0001531"}


id: PBO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh2 (predicted)","termid":"PBO:0000171"}


id: PBO:0085483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable subtilisin-family protease; role in formation of the dityrosine layer of spore walls; localizes to the spore wall and also the nuclear envelope and ER region in mature spores","termid":"PBO:0085483"}


id: PBO:0072291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 9","termid":"PBO:0072291"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["PMID:31920560","GOC:krc","PMID:26352669","PMID:9412485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: GO:0015099
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nickel (Ni) cations from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29831","MetaCyc:TRANS-RXN-141B"],"synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015099","terms_by_termid":{"GO:0044750":null}}


id: GO:1901527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any abscisic acid mediated signaling pathway that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie","PMID:22730405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"abscisic acid-activated signaling pathway involved in stomatal movement","synonyms":[{"name":"abscisic acid mediated signaling pathway involved in stomatal movement","type":"related"},{"name":"abscisic acid mediated signalling involved in stomatal movement","type":"exact"}],"termid":"GO:1901527"}


id: PBO:0047121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 167 member A","termid":"PBO:0047121"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:expert_rsh","GOC:ma","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: GO:0061382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule tip cell. A Malpighian tubule tip cell is a mitogenic signaling cell that controls the proliferation of its neighboring cells.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:7821213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule tip cell differentiation","termid":"GO:0061382"}


id: GO:0070298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorelay signal transduction system","synonyms":[{"name":"down regulation of two-component signal transduction","type":"exact"},{"name":"down-regulation of two-component signal transduction","type":"exact"},{"name":"downregulation of two-component signal transduction","type":"exact"},{"name":"inhibition of two-component signal transduction","type":"narrow"},{"name":"negative regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"negative regulation of two-component signal transduction system (phosphorelay)","type":"narrow"}],"termid":"GO:0070298"}


id: GO:0006558
data:
  {"annotated_genes":["SJAG_03124","SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104673,85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","termid":"GO:1902221"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00518":null,"SJAG_03124":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-phenylalanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-phenylalanine metabolism","type":"exact"},{"name":"phenylalanine metabolic process","type":"broad"},{"name":"phenylalanine metabolism","type":"broad"}],"termid":"GO:0006558","terms_by_termid":{"GO:0009094":null}}


id: PBO:0028483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028483"}


id: GO:0090374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["PMID:11251115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oligopeptide export from mitochondrion","termid":"GO:0090374"}


id: PBO:0082509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form active complex, Psy4p may provide substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; involved in activation of Gln3p to alleviate nitrogen catabolite repression; Pph3p and Psy2p localize to foci on meiotic chromosomes","termid":"PBO:0082509"}


id: GO:0016533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine kinase activity; in mammals composed of catalytic subunit CDK5 and regulatory subunits CDK5R1 or CDK5R2. Contrary to its gene symbol, CDK5 is not cyclin-dependent.","definition_xrefs":["PMID:15689152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein kinase 5 complex","synonyms":[{"name":"cyclin-dependent protein kinase 5 holoenzyme complex","type":"related"}],"termid":"GO:0016533"}


id: GO:1900618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot system morphogenesis","synonyms":[{"name":"regulation of shoot morphogenesis","type":"exact"}],"termid":"GO:1900618"}


id: PBO:0063861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1","termid":"PBO:0063861"}


id: GO:0031439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA cleavage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA cleavage (obsolete GO:0031439)","synonyms":[{"name":"activation of mRNA cleavage","type":"narrow"},{"name":"stimulation of mRNA cleavage","type":"narrow"},{"name":"up regulation of mRNA cleavage","type":"exact"},{"name":"up-regulation of mRNA cleavage","type":"exact"},{"name":"upregulation of mRNA cleavage","type":"exact"}],"termid":"GO:0031439"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: GO:0048579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0697037754","GOC:jid","ISBN:0582015952","GOC:pj","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"},{"relation_name":"negatively_regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-day photoperiodism, flowering","synonyms":[{"name":"down regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"down-regulation of long-day photoperiodism, flowering","type":"exact"},{"name":"downregulation of long-day photoperiodism, flowering","type":"exact"},{"name":"inhibition of long-day photoperiodism, flowering","type":"narrow"}],"termid":"GO:0048579"}


id: GO:0007131
data:
  {"annotated_genes":["SJAG_03525","SJAG_04950","SJAG_02592","SJAG_01044","SJAG_01410","SJAG_02822","SJAG_02460","SJAG_00266","SJAG_05373","SJAG_05333","SJAG_02652","SJAG_07002","SJAG_02311","SJAG_00980","SJAG_02339","SJAG_02181","SJAG_01677","SJAG_01156","SJAG_05295","SJAG_02490","SJAG_04748","SJAG_00100","SJAG_04205","SJAG_03567","SJAG_02465","SJAG_02556","SJAG_03221","SJAG_02294","SJAG_01076","SJAG_00172","SJAG_03720","SJAG_02267","SJAG_04303","SJAG_02616","SJAG_00727","SJAG_02708","SJAG_03751","SJAG_01419","SJAG_00623","SJAG_03048","SJAG_03219","SJAG_01138","SJAG_00935","SJAG_01708","SJAG_03438","SJAG_00908","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84705,85205,85430,85729,86419,86468,86927,87577,88774,88851,89339,90848,93021,96624,96657,96721,97598,99946,100401,100902,100930,102788,103737,104040,107185,111579,113140,114771],"is_not":false,"summary":null,"term":"GO:0007131"},{"annotations":[104034],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[84698,103731,85302,112842,95145],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[100929,86467,107184,105718,104810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[106366,103733],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[84638,88974,97596,113136,103734,96621,106367,93020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[84639,88975,96622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[104037],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[104420,98459],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[85204],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[85309,112335,90479],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[113142,102252,104216,113325,106390,113473,105152,97600,114772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[112287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.","definition_xrefs":["PMID:2087779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reciprocal homologous recombination","termid":"GO:0140527"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00266":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02181":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_03048":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04950":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000021","GO:0007145"],"synonyms":[{"name":"female meiotic recombination","type":"narrow"},{"name":"gene conversion with reciprocal crossover","type":"exact"}],"termid":"GO:0007131","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0007131":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: PBO:0045239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7","termid":"PBO:0045239"}


id: PBO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 4","termid":"PBO:0075279"}


id: GO:0045312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine biosynthetic process","synonyms":[{"name":"nor-spermidine anabolism","type":"exact"},{"name":"nor-spermidine biosynthesis","type":"exact"},{"name":"nor-spermidine formation","type":"exact"},{"name":"nor-spermidine synthesis","type":"exact"}],"termid":"GO:0045312"}


id: GO:0010595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"positively_regulates","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell migration","termid":"GO:0010595"}


id: FYPO:0001246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"normal RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"normal RNA level during cellular response to H2O2","type":"exact"},{"name":"normal RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"normal transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001246"}


id: GO:0021954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron development","termid":"GO:0021954"}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: GO:0071051
data:
  {"annotated_genes":["SJAG_00854","SJAG_03745","SJAG_03179","SJAG_01521","SJAG_04321","SJAG_04153","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88353,89173,92023,93354,98163,102526,111489],"is_not":false,"summary":null,"term":"GO:0071051"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a snoRNA molecule linked to prior polyadenylation of the 3'-end of the precursor snoRNA.","definition_xrefs":["PMID:18951092","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04153":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"poly(A)-dependent snoRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyadenylation-dependent snoRNA 3'-end processing","type":"exact"},{"name":"sno(s)RNA polyadenylation","type":"narrow"}],"termid":"GO:0071051","terms_by_termid":{"GO:0071051":null}}


id: PBO:0088156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane receptor protein (v-SNARE); involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins; SNC1 has a paralog, SNC2, that arose from the whole genome duplication","termid":"PBO:0088156"}


id: PBO:0017573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6 (predicted)","termid":"PBO:0017573"}


id: GO:0033039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a soluble salty compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah","PMID:36332657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"ionotropic salty taste receptor activity","termid":"GO:0033039"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["GOC:go_curators","PO:0008062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: GO:0004587
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102836],"is_not":false,"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxocarboxylate + L-ornithine = an L-alpha-amino acid + L-glutamate 5-semialdehyde.","definition_xrefs":["EC:2.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ornithine aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70666","MetaCyc:ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN","RHEA:13877","MetaCyc:ORNITHINELYSINE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-70654"],"synonyms":[{"name":"GabT","type":"related"},{"name":"L-ornithine 5-aminotransferase activity","type":"related"},{"name":"L-ornithine aminotransferase activity","type":"related"},{"name":"L-ornithine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"L-ornithine:alpha-ketoglutarate delta-aminotransferase activity","type":"related"},{"name":"OAT","type":"related"},{"name":"ornithine 5-aminotransferase activity","type":"related"},{"name":"ornithine delta-transaminase activity","type":"related"},{"name":"ornithine ketoacid aminotransferase activity","type":"related"},{"name":"ornithine transaminase activity","type":"related"},{"name":"ornithine(lysine) transaminase activity","type":"related"},{"name":"ornithine--2-oxoacid aminotransferase activity","type":"related"},{"name":"ornithine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--keto acid aminotransferase activity","type":"related"},{"name":"ornithine--keto acid transaminase activity","type":"related"},{"name":"ornithine--ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--oxo acid aminotransferase activity","type":"related"},{"name":"ornithine--oxo-acid transaminase activity","type":"related"},{"name":"ornithine-oxo-acid aminotransferase activity","type":"exact"},{"name":"ornithine-oxo-acid transaminase activity","type":"related"},{"name":"ornithine:alpha-oxoglutarate transaminase activity","type":"related"}],"termid":"GO:0004587","terms_by_termid":{"GO:0004587":null}}


id: PBO:0048470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCN1 activator of EIF2AK4","termid":"PBO:0048470"}


id: PBO:0028473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028473"}


id: GO:1902953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ER to Golgi vesicle-mediated transport.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie","PMID:17855360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of ER to Golgi vesicle-mediated transport","termid":"GO:0060628"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ER to Golgi vesicle-mediated transport","synonyms":[{"name":"activation of ER to Golgi transport","type":"narrow"},{"name":"activation of ER to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"positive regulation of ER to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of ER to Golgi transport","type":"exact"},{"name":"up regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of ER to Golgi transport","type":"exact"},{"name":"up-regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of ER to Golgi transport","type":"exact"},{"name":"upregulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:1902953"}


id: PBO:0082007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 3","termid":"PBO:0082007"}


id: GO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the formation of the posterior neural plate, the posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"positively_regulates","term_name":"posterior neural plate formation","termid":"GO:0090018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of posterior neural plate formation by FGF receptor signaling pathway","type":"related"},{"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060787"}


id: PBO:0045158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 14","termid":"PBO:0045158"}


id: FYPO:0000473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"increased mitotic recombination","synonyms":[{"name":"increased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased","type":"related"}],"termid":"FYPO:0000473"}


id: RO:HOM0000034
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_many_homology_relationship_with","termid":"RO:HOM0000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_orthology_relationship_with","synonyms":[{"name":"1 to many orthologous to","type":"exact"},{"name":"1:many orthology","type":"exact"},{"name":"co-orthology","type":"related"},{"name":"many to 1 orthology","type":"related"},{"name":"one-to-many orthology","type":"exact"}],"termid":"RO:HOM0000034"}


id: PBO:0080230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VKORC1 pseudogene 1","termid":"PBO:0080230"}


id: GO:1905418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"positive regulation of cell motility","termid":"GO:2000147"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amoeboid sperm motility","synonyms":[{"name":"activation of ameboid sperm motility","type":"narrow"},{"name":"activation of ameboid sperm movement","type":"narrow"},{"name":"activation of amoeboid sperm motility","type":"narrow"},{"name":"activation of amoeboid sperm movement","type":"narrow"},{"name":"positive regulation of ameboid sperm motility","type":"exact"},{"name":"positive regulation of ameboid sperm movement","type":"exact"},{"name":"positive regulation of amoeboid sperm movement","type":"exact"},{"name":"up regulation of ameboid sperm motility","type":"exact"},{"name":"up regulation of ameboid sperm movement","type":"exact"},{"name":"up regulation of amoeboid sperm motility","type":"exact"},{"name":"up regulation of amoeboid sperm movement","type":"exact"},{"name":"up-regulation of ameboid sperm motility","type":"exact"},{"name":"up-regulation of ameboid sperm movement","type":"exact"},{"name":"up-regulation of amoeboid sperm motility","type":"exact"},{"name":"up-regulation of amoeboid sperm movement","type":"exact"},{"name":"upregulation of ameboid sperm motility","type":"exact"},{"name":"upregulation of ameboid sperm movement","type":"exact"},{"name":"upregulation of amoeboid sperm motility","type":"exact"},{"name":"upregulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905418"}


id: CHEBI:4031
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclosporin A","termid":"CHEBI:4031"}


id: PBO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_abnormal_germ_tube_morphology","termid":"PBO:0031064"}


id: FYECO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hexestrol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ hexestrol","termid":"FYECO:0000348"}


id: FYPO:0001995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing polymyxin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on polymyxin B","synonyms":[{"name":"normal cell population growth in presence of polymyxin B","type":"exact"},{"name":"normal cell population growth on polymyxin B","type":"exact"},{"name":"normal cellular response to polymyxin B","type":"related"},{"name":"normal vegetative cell population growth on polymixin B","type":"exact"}],"termid":"FYPO:0001995"}


id: PBO:0086260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates peroxisome populations; peroxisomal integral membrane protein; interacts with Pex11p, Pex25p, and Pex27p to control both constitutive peroxisome division and peroxisome morphology and abundance during peroxisome proliferation","termid":"PBO:0086260"}


