# terms

id: GO:0140599
data:
  {"annotated_genes":["SJAG_03200","SJAG_01745","SJAG_01374","SJAG_03729","SJAG_04148","SJAG_01584","SJAG_04284","SJAG_04578"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86256,87061,87438,92223,106486,106522,112087,112462],"is_not":false,"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"A nuclear membrane part at the midzone of the mitotic nuclear bridge. The midzone forms a bulge that is enriched in nuclear pores that lack baskets.","definition_xrefs":["PMID:25963819","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge midzone","termid":"GO:0140512"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone membrane domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140599","terms_by_termid":{"GO:0140599":null}}


id: PBO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pcr1","termid":"PBO:0002432"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: PBO:0039513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 1","termid":"PBO:0039513"}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: SO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that contains a core consensus sequence AGGTAAGGGTAATGCAC, is found in the intergenic regions of rDNA repeats, and is bound by an RNA polymerase I transcription termination factor (e.g. S. pombe Reb1). The S. pombe telomeric repeat consensus is TTAC(0-1)A(0-1)G(1-8).","definition_xrefs":["ISBN:978-0199638901","PMID:9016645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rDNA_intergenic_spacer_element","synonyms":[{"name":"rDIS","type":"exact"}],"termid":"SO:0001860"}


id: PBO:0041874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic arginine sensor for mTORC1 subunit 1","termid":"PBO:0041874"}


id: FYPO:0001813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-methyl-N'-nitro-N-nitrosoguanidine. Cells stop growing (and may die) at a concentration of N-methyl-N'-nitro-N-nitrosoguanidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"hypersensitive to N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"sensitive to MNNG","type":"exact"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during mitotic cell cycle","type":"related"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during vegetative growth","type":"exact"},{"name":"sensitive to nitrosoguanidine","type":"exact"}],"termid":"FYPO:0001813"}


id: PBO:0027582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_vacuole_during_nitrogen_starvation","termid":"PBO:0027582"}


id: PBO:0059198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X5, pseudogene","termid":"PBO:0059198"}


id: GO:0022832
data:
  {"annotated_genes":["SJAG_00048","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[85629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated channel activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022832","terms_by_termid":{"GO:0008308":null,"GO:0008331":null}}


id: GO:0070861
data:
  {"annotated_genes":["SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861","terms_by_termid":{"GO:0070863":null}}


id: PBO:0059701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 9","termid":"PBO:0059701"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: GO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 member 1 taste receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor binding","termid":"GO:0031883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 member 1 taste receptor binding","synonyms":[{"name":"type 1 member 1 taste receptor ligand","type":"narrow"}],"termid":"GO:0031884"}


id: GO:0035233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a germ cell from their site of production to the gonad, through the repulsion of cells away from a tissue.","definition_xrefs":["PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"germ cell migration","termid":"GO:0008354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell repulsion","termid":"GO:0035233"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PBO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein U pseudogene 1","termid":"PBO:0042748"}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: PR:P37818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginase-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.02c","secondary_identifiers":["UniProtKB:P37818"],"synonyms":[{"name":"SPBP26C9.02c","type":"related"},{"name":"Spom972h-ARG2","type":"exact"}],"termid":"PR:P37818"}


id: GO:0000439
data:
  {"annotated_genes":["SJAG_00758","SJAG_00901","SJAG_04368","SJAG_01207","SJAG_03206","SJAG_00995","SJAG_00512"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86020,86386,88272,99230,104544,105044,111184],"is_not":false,"summary":null,"term":"GO:0000439"}]},"cv_name":"cellular_component","definition":"The 7 subunit core of TFIIH that is a part of either the general transcription factor holo-TFIIH or the nucleotide-excision repair factor 3 complex. In S. cerevisiae/humans the complex is composed of: Ssl2/XPB, Tfb1/p62, Tfb2/p52, Ssl1/p44, Tfb4/p34, Tfb5/p8 and Rad3/XPD.","definition_xrefs":["PMID:7813015","PMID:17215295","PMID:23028141","PMID:22572993","PMID:22308316","GOC:krc","PMID:14500720","GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_04368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIH core complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000441"],"synonyms":[{"name":"SSL2-core TFIIH complex","type":"exact"},{"name":"core TFIIH complex","type":"exact"}],"termid":"GO:0000439","terms_by_termid":{"GO:0000439":null}}


id: SO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet in which the main chains of two consecutive residues are H-bonded to that of the third, and in which the dihedral angles are as follows: Residue(i): -140 degrees < phi(l) -20 degrees , -90 degrees < psi(l) < 40 degrees. Residue (i+1): -180 degrees < phi < -25 degrees or +120 degrees < phi < +180 degrees, +40 degrees < psi < +180 degrees or -180 degrees < psi < -120 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge","secondary_identifiers":["http://en.wikipedia.org/wiki/Beta_bulge","BS:00208"],"synonyms":[{"name":"beta bulge","type":"exact"}],"termid":"SO:0001107"}


id: PBO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf16","termid":"PBO:0005618"}


id: GO:0005319
data:
  {"annotated_genes":["SJAG_00355","SJAG_03050","SJAG_02581","SJAG_03721","SJAG_01095","SJAG_04370","SJAG_01229","SJAG_01590","SJAG_03338","SJAG_02132","SJAG_01470","SJAG_02323","SJAG_03416","SJAG_01945","SJAG_03710","SJAG_03746","SJAG_02114","SJAG_01731","SJAG_02516","SJAG_02375","SJAG_05209","SJAG_00669","SJAG_00230","SJAG_02957","SJAG_16459","SJAG_03741","SJAG_00018","SJAG_03100","SJAG_01329","SJAG_03851","SJAG_01225","SJAG_03718","SJAG_00589","SJAG_02943","SJAG_06440","SJAG_01722","SJAG_02897","SJAG_01305","SJAG_00587","SJAG_04984","SJAG_00576","SJAG_03172"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86659,98421,86661,86662,86663,86666,101137,86660,86665,86667,86664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140326"},{"annotations":[90528,94030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[96319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[104719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120013"},{"annotations":[95558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[97360,98297,105581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[94032,90530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[96272,90531,94033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[93651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[94034,108557,90532,95560,96273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[93652,112295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"},{"annotations":[95561,108559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[90533,95562,94035,108560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"},{"annotations":[92724,99672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017128"},{"annotations":[94725,87029,100125,102805,103593,93588,101904,103722,105595,85369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120014"},{"annotations":[102388,104275,90350,105434,107387,112276,98690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of lipids into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03100":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04984":null,"SJAG_05209":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6801250","Reactome:R-HSA-174786","Reactome:R-HSA-5688397","Reactome:R-HSA-8866329","Reactome:R-HSA-1369028","Reactome:R-HSA-5682285","Reactome:R-HSA-8848053","Reactome:R-HSA-5683672","Reactome:R-HSA-5682311","Reactome:R-HSA-1369052","Reactome:R-HSA-5683714"],"synonyms":[{"name":"apolipoprotein","type":"related"},{"name":"lipophorin","type":"narrow"}],"termid":"GO:0005319","terms_by_termid":{"GO:0008526":null,"GO:0017128":null,"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0120013":null,"GO:0120014":null,"GO:0120015":null,"GO:0120019":null,"GO:0140326":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0170045":null,"GO:0180013":null,"GO:1990050":null}}


id: PBO:0068850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 88, pseudogene","termid":"PBO:0068850"}


id: PBO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thin_stable_microtubule_bundle","termid":"PBO:0034460"}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: PBO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase (predicted)","termid":"PBO:0001126"}


id: PBO:0038624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic chromatin condensation inducer 1","termid":"PBO:0038624"}


id: MOD:00449
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:56","PubMed:11999733","PubMed:11857757","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate labeling reagent (N-term) (heavy form, +3amu)","synonyms":[{"name":"Acetate labeling reagent (N-term & K) (heavy form, +3amu)","type":"related"},{"name":"Acetyl:2H(3)","type":"related"}],"termid":"MOD:00449"}


id: PBO:0034244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_output_(obsolete_RO:0002403)","termid":"PBO:0034244"}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: PR:O13965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug70 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 70 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.05c","synonyms":[{"name":"Spom972h-mug70","type":"exact"}],"termid":"PR:O13965"}


id: PBO:0067922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 224","termid":"PBO:0067922"}


id: PBO:0111858
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0111858"}


id: PR:Q9P6M0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6M0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.06c","synonyms":[{"name":"Spom972h-slx4","type":"exact"},{"name":"synthetic lethal of unknown function protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6M0"}


id: GO:0030497
data:
  {"annotated_genes":["SJAG_01356","SJAG_02717","SJAG_02885","SJAG_01300","SJAG_00630"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94297,101938,107378],"is_not":false,"summary":null,"term":"GO:0030497"},{"annotations":[88046,85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[85635,88047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"The elongation of a fatty acid chain by the sequential addition of two-carbon units.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00630":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_02717":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030497","terms_by_termid":{"GO:0019367":null,"GO:0030497":null,"GO:0034625":null}}


id: PBO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 2","termid":"PBO:0044640"}


id: GO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex (plastoquinone)","termid":"GO:0010598"}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: MOD:01525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01525"}


id: GO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"part_of","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme oxidation","synonyms":[{"name":"haem oxidation","type":"exact"}],"termid":"GO:0006788"}


id: PBO:0067904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 206","termid":"PBO:0067904"}


id: GO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal to epithelial cell signaling","synonyms":[{"name":"inductive mesenchymal to epithelial cell signalling","type":"exact"}],"termid":"GO:0060522"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: GO:1904211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any membrane protein proteolysis that is involved in retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:22795130","GO_REF:0000060","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein proteolysis","termid":"GO:0033619"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0030163"],"is_obsolete":false,"name":"membrane protein proteolysis involved in retrograde protein transport, ER to cytosol","synonyms":[{"name":"intramembrane cleavage of ERAD substrate","type":"broad"},{"name":"intramembrane proteolysis involved in ERAD","type":"exact"},{"name":"membrane protein proteolysis involved in protein dislocation from ER","type":"exact"},{"name":"membrane protein proteolysis involved in protein retrotranslocation, ER to cytosol","type":"exact"},{"name":"membrane protein proteolysis involved in retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904211"}


id: GO:0015499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of formate from one side of a membrane to the other. Formate is also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"formate transmembrane transporter activity","secondary_identifiers":["GO:0015659","MetaCyc:TRANS-RXN-1","RHEA:29679"],"synonyms":[{"name":"formate uptake permease activity","type":"exact"},{"name":"formate uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015499"}


id: PBO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase Oar2","termid":"PBO:0090012"}


id: GO:2000941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose catabolic process","termid":"GO:2000939"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"positively_regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"positive regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000941"}


id: PBO:0083758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential Fe-S protein; required for ribosome biogenesis, translation initiation/termination; facilitates binding of multifactor complex (MFC) of initiation factors to small ribosomal subunit; Dom34-Hbs1 complex and Rli1p work in dissociating inactive ribosomes, thereby facilitating translation restart; forms complex with Lto1p and Yae1p; dependency on ROS-labile FeS clusters, activity in nuclear ribosomal-subunit export impaired by mild oxidative stress","termid":"PBO:0083758"}


id: PBO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (predicted)","termid":"PBO:0002248"}


id: GO:1990312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-II cohesin domain of a protein. Type-II cohesin domain is the binding partner of type-II dockerin domain.","definition_xrefs":["GOC:mengo_curators","PMID:23195689","PMID:24080387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type-II cohesin domain binding","termid":"GO:1990312"}


id: PR:Q9P7Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ACN9, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13137:SF6","PRO:DNx","OMA:SCHPO03084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.03c","secondary_identifiers":["UniProtKB:Q9P7Y2"],"synonyms":[{"name":"SDH assembly factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACN9","type":"exact"}],"termid":"PR:Q9P7Y2"}


id: PBO:0085576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Pba1p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC2 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085576"}


id: GO:0033085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell differentiation in thymus","synonyms":[{"name":"negative regulation of T cell development in thymus","type":"related"},{"name":"negative regulation of thymic T cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte cell differentiation","type":"exact"},{"name":"negative regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033085"}


id: GO:1903015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:23544079","GOC:rl","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of exo-alpha-sialidase activity","synonyms":[{"name":"regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"regulation of acetylneuraminidase activity","type":"exact"},{"name":"regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"regulation of alpha-neuraminidase activity","type":"exact"},{"name":"regulation of neuraminidase activity","type":"exact"},{"name":"regulation of sialidase activity","type":"exact"}],"termid":"GO:1903015"}


id: GO:0140847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that stops, prevents or reduces the transition from the initiation to the elongation phases of transcription by RNA polymerase II.","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140845"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"RNA polymerase II promoter clearance","termid":"GO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of promoter clearance from RNA polymerase II promoter","termid":"GO:0140847"}


id: PBO:0055734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7DN intronic transcript 1","termid":"PBO:0055734"}


id: GO:1990786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded DNA stimulus.","definition_xrefs":["PMID:10051633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to dsDNA","termid":"GO:1990784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsDNA","termid":"GO:1990786"}


id: GO:0008312
data:
  {"annotated_genes":["SJAG_01840","SJAG_02456","SJAG_03411","SJAG_01759","SJAG_03684","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86950,87731,110422,111179,111980,112692],"is_not":false,"summary":null,"term":"GO:0008312"}]},"cv_name":"molecular_function","definition":"Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP).","definition_xrefs":["PMID:6181418","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"7S RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008312","terms_by_termid":{"GO:0008312":null}}


id: PBO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.1","termid":"PBO:0000393"}


id: PBO:0071061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 63","termid":"PBO:0071061"}


id: PBO:0030870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_contraction","termid":"PBO:0030870"}


id: GO:0141024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a carbohydrate on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30736336","PMID:19527885","PMID:15210807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane carbohydrate","termid":"GO:0141024"}


id: GO:1904774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:8125303","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"negatively_regulates","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006744","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ubiquinone biosynthetic process","synonyms":[{"name":"down regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"down regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"down regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"down regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"down regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"down regulation of ubiquinone anabolism","type":"exact"},{"name":"down regulation of ubiquinone biosynthesis","type":"exact"},{"name":"down regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"down regulation of ubiquinone formation","type":"exact"},{"name":"down regulation of ubiquinone synthesis","type":"exact"},{"name":"down-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"down-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"down-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"down-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"down-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"down-regulation of ubiquinone anabolism","type":"exact"},{"name":"down-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"down-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"down-regulation of ubiquinone formation","type":"exact"},{"name":"down-regulation of ubiquinone synthesis","type":"exact"},{"name":"downregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"downregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"downregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"downregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"downregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"downregulation of ubiquinone anabolism","type":"exact"},{"name":"downregulation of ubiquinone biosynthesis","type":"exact"},{"name":"downregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"downregulation of ubiquinone formation","type":"exact"},{"name":"downregulation of ubiquinone synthesis","type":"exact"},{"name":"inhibition of coenzyme Q biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"inhibition of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"inhibition of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"inhibition of ubiquinone anabolism","type":"narrow"},{"name":"inhibition of ubiquinone biosynthesis","type":"narrow"},{"name":"inhibition of ubiquinone biosynthetic process","type":"narrow"},{"name":"inhibition of ubiquinone formation","type":"narrow"},{"name":"inhibition of ubiquinone synthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"negative regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"negative regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"negative regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"negative regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"negative regulation of ubiquinone anabolism","type":"exact"},{"name":"negative regulation of ubiquinone biosynthesis","type":"exact"},{"name":"negative regulation of ubiquinone formation","type":"exact"},{"name":"negative regulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904774"}


id: PR:O94276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein P8B7.28c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.28c","synonyms":[{"name":"Spom972h-stc1","type":"exact"}],"termid":"PR:O94276"}


id: GO:1905028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization during AV node cell action potential.","definition_xrefs":["GOC:rph","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","PMID:19726871","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900826"},{"relation_name":"is_a","term_name":"regulation of membrane depolarization during AV node cell action potential","termid":"GO:1905027"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization during AV node cell action potential","termid":"GO:0086045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization during AV node cell action potential","synonyms":[{"name":"down regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during AV node cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane depolarization during AV node cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during AV node cell action potential","type":"narrow"},{"name":"inhibition of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of membrane depolarization during AV node cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of membrane depolarization during atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905028"}


id: PBO:0004763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa43","termid":"PBO:0004763"}


id: PBO:0064579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B","termid":"PBO:0064579"}


id: PBO:0087355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor associated with the spliceosome; contains a U-box, a motif found in a class of ubiquitin ligases, and a WD40 domain; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087355"}


id: FYPO:0002821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body","termid":"FYPO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during interphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during interphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during interphase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic interphase","type":"exact"},{"name":"decreased protein localization to spindle pole body during interphase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during interphase","type":"exact"}],"termid":"FYPO:0002821"}


id: PBO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng1","termid":"PBO:0000714"}


id: PBO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier Urm1 (predicted)","termid":"PBO:0036500"}


id: PBO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 14","termid":"PBO:0050197"}


id: GO:0030978
data:
  {"annotated_genes":["SJAG_04184","SJAG_00610","SJAG_02718","SJAG_04236","SJAG_03057","SJAG_02278","SJAG_01028","SJAG_02916","SJAG_04666","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[107370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"},{"annotations":[113810,105140,110435,100248,85285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[98928,88528,85575,91038],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02718":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan metabolism","type":"exact"}],"termid":"GO:0030978","terms_by_termid":{"GO:0030979":null,"GO:0070600":null,"GO:0070610":null,"GO:0072316":null}}


id: PBO:0089573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop56","termid":"PBO:0089573"}


id: GO:0008347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a glial cell, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration","secondary_identifiers":["GO:0043359"],"synonyms":[{"name":"glia cell migration","type":"exact"}],"termid":"GO:0008347"}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: GO:0003825
data:
  {"annotated_genes":["SJAG_01427","SJAG_01862","SJAG_00129","SJAG_01531","SJAG_00182","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73389,87955,89443,92625,93246,97137],"is_not":false,"summary":null,"term":"GO:0003825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-glucose-6-phosphate = UDP + alpha,alpha-trehalose-6-phosphate.","definition_xrefs":["EC:2.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18889","MetaCyc:TREHALOSE6PSYN-RXN"],"synonyms":[{"name":"UDP-glucose-glucose-phosphate glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"UDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"alpha,alpha-trehalose phosphate synthase (UDP-forming)","type":"related"},{"name":"phosphotrehalose-uridine diphosphate transglucosylase activity","type":"related"},{"name":"transglucosylase activity","type":"exact"},{"name":"trehalose 6-phosphate synthase activity","type":"exact"},{"name":"trehalose 6-phosphate synthetase activity","type":"exact"},{"name":"trehalose phosphate synthase activity","type":"related"},{"name":"trehalose phosphate synthetase activity","type":"related"},{"name":"trehalose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"trehalose-P synthetase activity","type":"related"},{"name":"trehalose-phosphate synthase activity","type":"exact"},{"name":"trehalose-phosphate synthetase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyl transferase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0003825","terms_by_termid":{"GO:0003825":null}}


id: GO:0000217
data:
  {"annotated_genes":["SJAG_05373","SJAG_02200","SJAG_01419","SJAG_02262","SJAG_04752","SJAG_01262","SJAG_04064","SJAG_01076","SJAG_04933","SJAG_02724","SJAG_02708","SJAG_04671","SJAG_03097","SJAG_02294","SJAG_02226","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112851,95449,107537,89765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000405"},{"annotations":[90835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"},{"annotations":[95450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062037"},{"annotations":[96661,102131,112854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000406"},{"annotations":[90838,93026,96728,88752,102132,90976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000400"},{"annotations":[102134,96662,102000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[104582,77877,95453,90839,96663,102136,112859,102700,84713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000403"}]},"cv_name":"molecular_function","definition":"Binding to a DNA secondary structure element such as a four-way junction, a bubble, a loop, Y-form DNA, or a double-strand/single-strand junction.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_02200":null,"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_04064":null,"SJAG_04671":null,"SJAG_04752":null,"SJAG_04933":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA secondary structure binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000217","terms_by_termid":{"GO:0000400":null,"GO:0000402":null,"GO:0000403":null,"GO:0000404":null,"GO:0000405":null,"GO:0000406":null,"GO:0062037":null}}


id: PBO:0079843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog B","termid":"PBO:0079843"}


id: PBO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway","termid":"PBO:0039687"}


id: GO:0033034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid cell apoptotic process","synonyms":[{"name":"activation of myeloid cell apoptosis","type":"narrow"},{"name":"positive regulation of myeloid cell apoptosis","type":"narrow"},{"name":"stimulation of myeloid cell apoptosis","type":"narrow"},{"name":"up regulation of myeloid cell apoptosis","type":"exact"},{"name":"up-regulation of myeloid cell apoptosis","type":"exact"},{"name":"upregulation of myeloid cell apoptosis","type":"exact"}],"termid":"GO:0033034"}


id: GO:0170044
data:
  {"annotated_genes":["SJAG_04827","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[83758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"non-proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid breakdown","type":"exact"},{"name":"non-proteinogenic amino acid catabolism","type":"exact"},{"name":"non-proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170044","terms_by_termid":{"GO:0019478":null,"GO:0036088":null}}


id: FYPO:0004717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to heterochromatin is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to heterochromatin during meiosis","synonyms":[{"name":"abnormal protein localisation to heterochromatin during meiosis","type":"exact"},{"name":"abnormal protein localization to heterochromatin during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004717"}


id: PATO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complete three dimensional shape in which there is a line connecting pair of points on the object that lies outside the object. Or: a shape with cavities. Contrast: concave.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"has_part","term_name":"concave","termid":"PATO:0001857"},{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concave 3-D shape","secondary_identifiers":["Image:http\\://en.wikipedia.org/wiki/Image\\:Convex_polygon_illustration2.png"],"termid":"PATO:0002008"}


id: GO:0060432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the lung, to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung pattern specification process","termid":"GO:0060432"}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["PMID:10369671","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: PATO:0001141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001141 ig a concentration value (obsolete PATO:0001141)","termid":"PATO:0001141"}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: GO:0034565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-nitro-1,2-dihydro-1,3,5-triazine + 2 H2O = 1-nitro-1,3,5-triazinane-2,4-diol.","definition_xrefs":["UM-BBD_reactionID:r0872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"1-nitro-1,2-dihydro-1,3,5-triazine hydrolase activity","secondary_identifiers":["EC:3.5.99.-"],"termid":"GO:0034565"}


id: GO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior temporal gyrus over time, from its formation to the mature structure. The superior temporal gyrus is a portion of the cerebral cortex that extends from the lateral sulcus to the superior temporal sulcus.","definition_xrefs":["FMA:61905","GOC:mah","PMID:11484000","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior temporal gyrus development","termid":"GO:0071109"}


id: PBO:0029345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_tRNA_level","termid":"PBO:0029345"}


id: PBO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member C","termid":"PBO:0047231"}


id: PBO:0050785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 2B","termid":"PBO:0050785"}


id: PBO:0027153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_histidine_level","termid":"PBO:0027153"}


id: PBO:0070435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGRIP1 like","termid":"PBO:0070435"}


id: PBO:0091069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mug129-like protein Mug129b","termid":"PBO:0091069"}


id: PBO:0058905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12123","termid":"PBO:0058905"}


id: GO:1902231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.","definition_xrefs":["GOC:TermGenie","PMID:15314165","GOC:rl","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage","type":"exact"}],"termid":"GO:1902231"}


id: PBO:0013477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Atd3 (predicted)","termid":"PBO:0013477"}


id: GO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of four asymmetric divisions undergone by the sensory organ precursor cells to generate cells that have distinct cell fates. For example, in the external sensory organ, the precursor cells give rise to one multidendritic neuron and four additional cells (the socket, shaft, sheath cells and the external sense neuron).","definition_xrefs":["GOC:mah","PMID:11171389","PMID:18295597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell division","synonyms":[{"name":"sense organ precursor cell division","type":"exact"}],"termid":"GO:0045035"}


id: GO:0090055
data:
  {"annotated_genes":["SJAG_02342","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90474,106408],"is_not":false,"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of heterochromatin formation at silent mating-type cassette.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of silent mating-type cassette heterochromatin formation","termid":"GO:0090054"},{"relation_name":"positively_regulates","term_name":"silent mating-type cassette heterochromatin formation","termid":"GO:0030466"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02342":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0044085","GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of silent mating-type cassette heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of chromatin silencing at silent mating-type cassette","type":"exact"},{"name":"positive regulation of silent mating-type cassette heterochromatin assembly","type":"exact"}],"termid":"GO:0090055","terms_by_termid":{"GO:0090055":null}}


id: GO:0007360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes encoding transcription factors in the posterior region of an insect embryo by a combination of maternal regulatory signals and interactions among themselves; exemplified by the activation of expression of the Drosophila knirps gene.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of posterior gap gene transcription (obsolete GO:0007360)","synonyms":[{"name":"knirps activation","type":"narrow"},{"name":"activation of posterior gap gene","type":"broad"},{"name":"activation of posterior gap gene transcription","type":"narrow"},{"name":"stimulation of posterior gap gene transcription","type":"narrow"},{"name":"up regulation of posterior gap gene transcription","type":"exact"},{"name":"up-regulation of posterior gap gene transcription","type":"exact"},{"name":"upregulation of posterior gap gene transcription","type":"exact"}],"termid":"GO:0007360"}


id: PBO:0090065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA polymerase specificity factor, predicted rRNA methyltransferase Mtf1","termid":"PBO:0090065"}


id: GO:0071979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility in which contractile cytoskeletal elements alter cell shape, resulting in the smooth movement of a cell through a liquid medium.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell swimming","termid":"GO:0071975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-mediated cell swimming","synonyms":[{"name":"cytoskeleton-mediated swimming motility","type":"exact"}],"termid":"GO:0071979"}


id: PATO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete irregular shape (obsolete PATO:0000940)","termid":"PATO:0000940"}


id: PBO:0086312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with role in regulation of MBF-specific transcription at Start; phosphorylated by Cln-Cdc28p kinases in vitro; unphosphorylated form binds Swi6p, which is required for Stb1p function; expression is cell-cycle regulated; STB1 has a paralog, YOL131W, that arose from the whole genome duplication","termid":"PBO:0086312"}


id: PBO:0053732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 951","termid":"PBO:0053732"}


id: PBO:0040360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit j","termid":"PBO:0040360"}


id: PBO:0050112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 22","termid":"PBO:0050112"}


id: GO:0033992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-D-fructose = 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose + H2O.","definition_xrefs":["EC:4.2.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose dehydratase activity","secondary_identifiers":["MetaCyc:4.2.1.111-RXN","RHEA:15725"],"synonyms":[{"name":"1,5-anhydro-D-arabino-hex-2-ulose dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose 4-dehydratase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase (ascopyrone-M-forming) activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydro-lyase activity","type":"related"},{"name":"1,5-anhydro-D-fructose hydrolyase activity","type":"related"},{"name":"AF dehydratase activity","type":"related"},{"name":"AFDH","type":"related"}],"termid":"GO:0033992"}


id: GO:0036284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing close contact between Sertoli-Sertoli cells or Sertoli-spermatids in the seminiferous tubules of the testes.","definition_xrefs":["PMID:22510523","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tubulobulbar complex","synonyms":[{"name":"TBC","type":"exact"}],"termid":"GO:0036284"}


id: PBO:0047913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q32)","termid":"PBO:0047913"}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0081488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 384","termid":"PBO:0081488"}


id: GO:0103118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamine(1-) + an (3R)-3-hydroxymyristoyl-[acp] = UDP-2,3-bis[O-(3R)-3-hydroxymyristoyl]-alpha-D-glucosamine + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.191","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity","secondary_identifiers":["MetaCyc:UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN","RHEA:17817","GO:0043764"],"synonyms":[{"name":"UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity","type":"related"}],"termid":"GO:0103118"}


id: GO:0052403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont catalytic activity","termid":"GO:0052422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of symbiont catalytic activity","secondary_identifiers":["GO:0052405"],"synonyms":[{"name":"down regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down regulation by host of symbiont protein function","type":"broad"},{"name":"down-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down-regulation by host of symbiont protein function","type":"broad"},{"name":"downregulation by host of symbiont enzyme activity","type":"exact"},{"name":"downregulation by host of symbiont protein function","type":"broad"},{"name":"inhibition by host of symbiont enzyme activity","type":"narrow"},{"name":"inhibition by host of symbiont protein function","type":"narrow"},{"name":"inhibition of symbiont enzyme activity","type":"exact"},{"name":"inhibition of symbiont protein function","type":"broad"},{"name":"negative regulation by host of symbiont enzyme activity","type":"exact"},{"name":"negative regulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052403"}


id: PBO:0054828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2241","termid":"PBO:0054828"}


id: PBO:0013012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp4 family, Rna4","termid":"PBO:0013012"}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: PBO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086018"}


id: PBO:0041092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 1","termid":"PBO:0041092"}


id: PBO:0082765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair","termid":"PBO:0082765"}


id: PBO:0091046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar phytochelatin and glutathione S-conjugate ABC family transmembrane transporter Abc4","termid":"PBO:0091046"}


id: FYPO:0006793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the specificity between a meiotic driver gene and a drive suppressor gene differs from that observed when both genes are wild type. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PMID:30475921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered meiotic drive suppression specificity","synonyms":[{"name":"abnormal meiotic drive suppression specificity","type":"exact"},{"name":"abnormal specificity of suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006793"}


id: PATO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved","synonyms":[{"name":"bowing","type":"narrow"},{"name":"curled","type":"related"}],"termid":"PATO:0000406"}


id: PBO:0079776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose glycoprotein glucosyltransferase 1","termid":"PBO:0079776"}


id: FYPO:0002198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable vegetative cell population with abnormal cell shape (obsolete FYPO:0002198)","synonyms":[{"name":"viable, abnormally shaped vegetative cell population","type":"exact"}],"termid":"FYPO:0002198"}


id: GO:0070241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated T cell autonomous cell death.","definition_xrefs":["ISBN:0781765196","GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated T cell autonomous cell death","termid":"GO:0070239"},{"relation_name":"positively_regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated T cell autonomous cell death","synonyms":[{"name":"activation of activated T cell autonomous cell death","type":"narrow"},{"name":"positive regulation of ACAD","type":"broad"},{"name":"positive regulation of activated T cell apoptosis","type":"broad"},{"name":"positive regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"positive regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"positive regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"positive regulation of activated cell autonomous cell death","type":"broad"},{"name":"stimulation of activated T cell autonomous cell death","type":"narrow"},{"name":"up regulation of activated T cell autonomous cell death","type":"exact"},{"name":"up-regulation of activated T cell autonomous cell death","type":"exact"},{"name":"upregulation of activated T cell autonomous cell death","type":"exact"}],"termid":"GO:0070241"}


id: GO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigmentation","termid":"GO:0043473"}


id: FYPO:0007016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of rRNA genes in ribosomal DNA repeat regions is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of rRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of ribosomal RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007016"}


id: PBO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha z","termid":"PBO:0048804"}


id: GO:0019886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class II","secondary_identifiers":["GO:0042591","GO:0048005"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class II","type":"broad"},{"name":"antigen presentation, exogenous peptide antigen","type":"broad"},{"name":"antigen processing, exogenous antigen via major histocompatibility complex class II","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0019886"}


id: GO:0090383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH reduction","termid":"GO:0051452"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome acidification","synonyms":[{"name":"phagosomal acidification","type":"exact"}],"termid":"GO:0090383"}


id: FYPO:0007708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: PBO:0071911
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: GO:0060369
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id: GO:0120185
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id: FYPO:0001387
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id: GO:1904559
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id: PBO:0004092
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: PBO:0011991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris Related Protein 1","termid":"PBO:0011991"}


id: PBO:0000452
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Akr1 (predicted)","termid":"PBO:0000452"}


id: PATO:0001252
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id: GO:0008233
data:
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id: PBO:0046942
data:
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id: GO:0051182
data:
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id: PBO:0090215
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic, STKc MAK-like Mde3","termid":"PBO:0090215"}


id: GO:1902408
data:
  {"annotated_genes":["SJAG_02392","SJAG_03596","SJAG_01889","SJAG_01215","SJAG_00807","SJAG_00845","SJAG_02380","SJAG_03309","SJAG_00256","SJAG_01787","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84433,92419,104916,106828,115306],"is_not":false,"summary":null,"term":"GO:1902408"},{"annotations":[115305],"is_not":true,"summary":null,"term":"GO:1902408"},{"annotations":[86893,99782,115307,91957,106830],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[107432,84016,97462],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"}]},"cv_name":"biological_process","definition":"The process in which a contractile ring is positioned in a specific location during the mitotic cell cycle. This process is critical for both for both symmetric and asymmetric cell divisions.","definition_xrefs":["PMID:28162898","PMID:26553932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01215":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03309":null,"SJAG_03596":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1902408","terms_by_termid":{"GO:1902408":null,"GO:1902472":null,"GO:1903617":null}}


id: GO:0036001
data:
  {"annotated_genes":["SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88920],"is_not":false,"summary":null,"term":"GO:0036001"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal 5'-phosphate, the active form of vitamin B6, from simpler components.","definition_xrefs":["GOC:yaf","MetaCyc:PYRIDOXSYN-PWY","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"'de novo' pyridoxal 5'-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' PLP biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate anabolism","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate biosynthesis","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate formation","type":"exact"},{"name":"'de novo' pyridoxal 5'-phosphate synthesis","type":"exact"},{"name":"'de novo' pyridoxal phosphate biosynthetic process","type":"broad"}],"termid":"GO:0036001","terms_by_termid":{"GO:0036001":null}}


id: FYECO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose MM","synonyms":[{"name":"sucrose minimal medium","type":"exact"}],"termid":"FYECO:0000147"}


id: PBO:0088573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex cyclin subunit Srb11","termid":"PBO:0088573"}


id: PBO:0090631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein O-mannosyltransferase Ogm1","termid":"PBO:0090631"}


id: PBO:0111485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD S5 small phosphatase Psr1","termid":"PBO:0111485"}


id: PBO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily F member 1","termid":"PBO:0052128"}


id: GO:0021885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another at least one of which is located in the forebrain.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain cell migration","termid":"GO:0021885"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: PR:000027566
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04909-1, Ser-122, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta1/Phos(S121)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A-alpha phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hta1/Phos:2","type":"exact"},{"name":"histone H2A.1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"hta1/Phos(S121)","type":"exact"},{"name":"hta1/Phos:(S122)","type":"exact"}],"termid":"PR:000027566"}


id: GO:0018159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of peptidyl-L-methionine to peptidyl-L-methionine sulfone.","definition_xrefs":["RESID:AA0251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-methionine oxidation","termid":"GO:0018159"}


id: GO:0035560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + H2O = pyropheophorbide a + methanol + CO2. The reaction occurs in two steps; pheophoridase catalyzes the conversion of pheophorbide a to a precursor of pyropheophorbide a, C-13(2)-carboxylpyropheophorbide a, by demethylation, and then the precursor is decarboxylated non-enzymatically to yield pyropheophorbide a.","definition_xrefs":["RHEA:32483","PMID:16228561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"pheophorbidase activity","secondary_identifiers":["EC:3.1.1.82"],"synonyms":[{"name":"PPD activity","type":"related"},{"name":"phedase activity","type":"related"},{"name":"pheophoridase activity","type":"related"}],"termid":"GO:0035560"}


id: PBO:0075992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1B","termid":"PBO:0075992"}


id: PBO:0080359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 14 pseudogene","termid":"PBO:0080359"}


id: PBO:0042164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 25","termid":"PBO:0042164"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: PBO:0083000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p","termid":"PBO:0083000"}


id: FYPO:0002716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuole fusion during vegetative growth","synonyms":[{"name":"normal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"normal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"normal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0002716"}


id: PBO:0043599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVIII alpha 1 chain","termid":"PBO:0043599"}


id: GO:1900808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumigaclavine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumigaclavine C catabolic process (obsolete GO:1900808)","synonyms":[{"name":"fumigaclavine C breakdown","type":"exact"},{"name":"fumigaclavine C catabolism","type":"exact"},{"name":"fumigaclavine C degradation","type":"exact"}],"termid":"GO:1900808"}


id: PBO:0040140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 3","termid":"PBO:0040140"}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: PBO:0065753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase B","termid":"PBO:0065753"}


id: GO:0071502
data:
  {"annotated_genes":["SJAG_02381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86933],"is_not":false,"summary":null,"term":"GO:0071502"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to temperature stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to thermal stimulus","type":"exact"}],"termid":"GO:0071502","terms_by_termid":{"GO:0071502":null}}


id: GO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a lymphocyte.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte mediated immunity","synonyms":[{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002449"}


id: PBO:0077934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 7","termid":"PBO:0077934"}


id: GO:0033054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glutamate, the D-enantiomer of the amino acid glutamate, i.e. (2R)-2-aminopentanedioic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glutamate metabolic process","synonyms":[{"name":"D-glutamate metabolism","type":"exact"}],"termid":"GO:0033054"}


id: GO:0007163
data:
  {"annotated_genes":["SJAG_00229","SJAG_03086","SJAG_02392","SJAG_02624","SJAG_02695","SJAG_03126","SJAG_00333","SJAG_00236","SJAG_02760","SJAG_04980","SJAG_02366","SJAG_00610","SJAG_00152","SJAG_00514","SJAG_04624","SJAG_04322","SJAG_03453","SJAG_03011","SJAG_04666","SJAG_00332","SJAG_03705","SJAG_04522","SJAG_01376","SJAG_02819","SJAG_03718","SJAG_03486","SJAG_00851","SJAG_04653","SJAG_04509","SJAG_00317","SJAG_01799","SJAG_04461","SJAG_00185","SJAG_03625","SJAG_01196","SJAG_04724","SJAG_00424","SJAG_01456","SJAG_03637","SJAG_01794","SJAG_00355","SJAG_03540","SJAG_00028","SJAG_00216","SJAG_02022","SJAG_03581","SJAG_01613","SJAG_00596","SJAG_00845","SJAG_03596","SJAG_01901","SJAG_03754","SJAG_00030","SJAG_00910","SJAG_02737","SJAG_01388","SJAG_04703","SJAG_01722","SJAG_02536","SJAG_03170","SJAG_01732","SJAG_02838","SJAG_00661","SJAG_00268","SJAG_03048","SJAG_01373","SJAG_03748"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86966,87257,89841,89947,94020,99826,100446,101219,101410,102955,104820,105167,106827,112232],"is_not":false,"summary":null,"term":"GO:0007163"},{"annotations":[84215,95815,106825,102914,99568,113920,112529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[100707,115284,88686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061171"},{"annotations":[110853,93077,100708,86965,92423,89579,85506,85998,93306,84053,88372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030010"},{"annotations":[93078,112983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000132"},{"annotations":[100709,84624,95406,85572,101409,96251,91950,106826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030950"},{"annotations":[95816,100710,108363,95730,90679,91951,114649,85999,103677,110101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061245"},{"annotations":[100596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[97348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030952"},{"annotations":[114151,95303,114671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030951"},{"annotations":[104270,112272,90346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030011"},{"annotations":[87080],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904846"},{"annotations":[103679,108532,99780],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061173"},{"annotations":[112634,103680],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[101411,89843,96253,99781],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[90683,108021],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000114"},{"annotations":[89844,98470],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[91769,90684,87252,100600,96256,114793,101414,109111],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[96472,87053,91960,105488,96278,89582,84059],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032878"},{"annotations":[98927,84060,88527],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular 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or maintenance of cell polarity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0030012","GO:0030467"],"synonyms":[{"name":"cell polarity","type":"related"},{"name":"establishment and/or maintenance of cell polarity","type":"related"},{"name":"establishment and/or maintenance of cell polarization","type":"related"}],"termid":"GO:0007163","terms_by_termid":{"GO:0000132":null,"GO:0007163":null,"GO:0030010":null,"GO:0030011":null,"GO:0030950":null,"GO:0030951":null,"GO:0030952":null,"GO:0032878":null,"GO:0051523":null,"GO:0061171":null,"GO:0061173":null,"GO:0061245":null,"GO:0061246":null,"GO:1904846":null,"GO:2000099":null,"GO:2000100":null,"GO:2000114":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0066169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 2","termid":"PBO:0066169"}


id: GO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to parathyroid hormone","termid":"GO:0071107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to parathyroid hormone stimulus","termid":"GO:0071374"}


id: GO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs).","definition_xrefs":["PMID:23985560","PMID:28379604","GOC:aruk","GOC:dph","GOC:rl","GOC:tb","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA-mediated gene silencing","synonyms":[{"name":"regulation of gene silencing by miRNA","type":"exact"},{"name":"regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060964"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: PBO:0039942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID3B pseudogene 1","termid":"PBO:0039942"}


id: FYPO:0007443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and the protein is present in the cytosol instead.","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localization to ER membrane, with protein mislocalized to cytosol","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0007443"}


id: PBO:0045406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 8","termid":"PBO:0045406"}


id: GO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb over time, from its formation to the mature structure. The metanephric long descending thin limb is the descending thin limb of a long nephron in the metanephros that has a squamous epithelial morphology. The long descending limb starts in the inner stripe of the outer medulla and extends into the inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb development","termid":"GO:0072064"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric long nephron development","termid":"GO:0072238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb development","termid":"GO:0072269"}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100276],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + H2O = histone H4 L-lysine (position 16) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 16 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K16 deacetylase activity","termid":"GO:0034739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0033558","GO:0140096","GO:0003824","GO:0003674","GO:0019213","GO:0016787"],"is_obsolete":false,"name":"NAD-dependent histone H4K16 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:0015962
data:
  {"annotated_genes":["SJAG_04939","SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113122,107504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"diadenosine triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine triphosphate metabolism","type":"exact"}],"termid":"GO:0015962","terms_by_termid":{"GO:0015964":null}}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: FYPO:0005359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at the RTS1 replication fork barrier is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12840005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal termination of RNA polymerase II transcription","termid":"FYPO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal termination of RNA polymerase II transcription at RTS1 barrier","synonyms":[{"name":"normal RNA polymerase II release at RTS1 barrier","type":"related"},{"name":"normal RNA polymerase II transcription termination at RTS1 barrier","type":"exact"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005359"}


id: PBO:0053537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 539","termid":"PBO:0053537"}


id: PBO:0026667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septated_mononucleate_vegetative_cell","termid":"PBO:0026667"}


id: FYPO:0000124
data:
  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id: FYPO:0007066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the 90S preribosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal 90S preribosome assembly","synonyms":[{"name":"normal 90S preribosome assembly during mitotic cell cycle","type":"related"},{"name":"normal 90S preribosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007066"}


id: PBO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec6","termid":"PBO:0003707"}


id: PBO:0047272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member D","termid":"PBO:0047272"}


id: GO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086038"}


id: PBO:0003584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pof6 interacting protein Sip1, predicted AP-1 accessory protein","termid":"PBO:0003584"}


id: PR:Q9P7F1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate-binding domain-containing protein C2E1P3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.05c","synonyms":[{"name":"Spom972h-SPAC2E1P3.05c","type":"exact"}],"termid":"PR:Q9P7F1"}


id: PBO:0072087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 17","termid":"PBO:0072087"}


id: PBO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1","termid":"PBO:0050593"}


id: GO:0120510
data:
  {"annotated_genes":["SJAG_02306","SJAG_03701","SJAG_04016","SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88876,100821,105926,113872],"is_not":false,"summary":null,"term":"GO:0120510"}]},"cv_name":"cellular_component","definition":"A protein complex capable of condensing two 2Fe-2S clusters into one 4Fe-4S center in mitochondria. In S. cerevisiae, it consists of Isa1 and Isa2. In humans it consists of ISCA1 and ISCA2. Additional proteins may be present.","definition_xrefs":["PMID:33711344","PMID:25347204","PMID:34660592","PMID:29079644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02306":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"mitochondrial [4Fe-4S] assembly complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ISA complex","type":"exact"},{"name":"iron-sulfur assembly complex","type":"related"}],"termid":"GO:0120510","terms_by_termid":{"GO:0120510":null}}


id: GO:0016331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of embryonic epithelia are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}


id: GO:0097037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme out of a cell or organelle.","definition_xrefs":["GOC:lf","PMID:15369674","PMID:20610401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transport","termid":"GO:0015886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"heme export","termid":"GO:0097037"}


id: GO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are gaseous in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gas transport","termid":"GO:0015669"}


id: PATO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000807 proprioreception value (obsolete PATO:0000807)","termid":"PATO:0000807"}


id: PBO:0067231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 302, pseudogene","termid":"PBO:0067231"}


id: PBO:0055199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2624","termid":"PBO:0055199"}


id: GO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP catabolic process (obsolete GO:0006184)","synonyms":[{"name":"GTP breakdown","type":"exact"},{"name":"GTP catabolism","type":"exact"},{"name":"GTP degradation","type":"exact"},{"name":"GTP hydrolysis","type":"narrow"}],"termid":"GO:0006184"}


id: PR:Q09195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A delta(14)-sterol reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04051","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(14)-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.18","secondary_identifiers":["UniProtKB:Q09195"],"synonyms":[{"name":"C-14 sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TM7SF2","type":"exact"},{"name":"sterol C14-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09195"}


id: PBO:0060850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 1","termid":"PBO:0060850"}


id: SO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_right_handed_three","synonyms":[{"name":"catmat-3r","type":"exact"}],"termid":"SO:0100006"}


id: GO:2000121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"regulation of removal of superoxide radicals","synonyms":[{"name":"regulation of removal of O2-","type":"exact"},{"name":"regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:2000121"}


id: FYPO:0005887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled in one or more regions of the chromosome away from the centromere. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PMID:27666591","PomBase:vw","PomBase:mah","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"ectopic CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome assembly away from centromere","type":"exact"},{"name":"ectopic CENP-A containing nucleosome assembly","type":"related"},{"name":"ectopic CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"ectopic CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"ectopic CENP-A deposition","type":"related"},{"name":"ectopic CENP-A loading","type":"related"},{"name":"ectopic CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"ectopic centromere-specific histone exchange","type":"exact"},{"name":"ectopic centromere-specific nucleosome assembly","type":"exact"},{"name":"ectopic centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"multiple foci of CENP-A","type":"related"}],"termid":"FYPO:0005887"}


id: PBO:0000253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium channel regulatory subunit Yam8","termid":"PBO:0000253"}


id: PBO:0024843
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"West syndrome","termid":"PBO:0024843"}


id: PBO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 11","termid":"PBO:0045142"}


id: PBO:0088674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Rod1","termid":"PBO:0088674"}


id: GO:1903347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.","definition_xrefs":["PMID:25050009","GO_REF:0000058","GOC:jz","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"negatively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bicellular tight junction assembly","synonyms":[{"name":"down regulation of tight junction assembly","type":"exact"},{"name":"down regulation of tight junction formation","type":"exact"},{"name":"down-regulation of tight junction assembly","type":"exact"},{"name":"down-regulation of tight junction formation","type":"exact"},{"name":"downregulation of tight junction assembly","type":"exact"},{"name":"downregulation of tight junction formation","type":"exact"},{"name":"inhibition of tight junction assembly","type":"narrow"},{"name":"inhibition of tight junction formation","type":"narrow"},{"name":"negative regulation of tight junction formation","type":"exact"}],"termid":"GO:1903347"}


id: PBO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_to_vacuole_transport","termid":"PBO:0034662"}


id: GO:0033482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate biosynthetic process","termid":"GO:0033481"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"D-galacturonate metabolic process","termid":"GO:0046396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-galacturonate biosynthetic process","synonyms":[{"name":"D-galacturonate anabolism","type":"exact"},{"name":"D-galacturonate biosynthesis","type":"exact"},{"name":"D-galacturonate formation","type":"exact"},{"name":"D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033482"}


id: GO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"granum assembly","synonyms":[{"name":"grana formation","type":"exact"}],"termid":"GO:0090391"}


id: GO:1990698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoleoyl group, a 16-carbon monounsaturated fatty acid (C16:1), to an acceptor molecule.","definition_xrefs":["PMID:17141155","PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"palmitoleoyltransferase activity","termid":"GO:1990698"}


id: PR:Q09924
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10233:SF14","OMA:SCHPO01763","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit delta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.06","secondary_identifiers":["UniProtKB:Q09924"],"synonyms":[{"name":"Spom972h-EIF2B4","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit delta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09924"}


id: GO:1901001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to salt stress.","definition_xrefs":["PMID:22627139","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"negatively_regulates","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to salt stress","synonyms":[{"name":"down regulation of response to ionic osmotic stress","type":"exact"},{"name":"down regulation of response to salt stress","type":"exact"},{"name":"down regulation of salinity response","type":"exact"},{"name":"down-regulation of response to ionic osmotic stress","type":"exact"},{"name":"down-regulation of response to salt stress","type":"exact"},{"name":"down-regulation of salinity response","type":"exact"},{"name":"downregulation of response to ionic osmotic stress","type":"exact"},{"name":"downregulation of response to salt stress","type":"exact"},{"name":"downregulation of salinity response","type":"exact"},{"name":"inhibition of response to ionic osmotic stress","type":"exact"},{"name":"inhibition of response to salt stress","type":"narrow"},{"name":"inhibition of salinity response","type":"exact"},{"name":"negative regulation of response to ionic osmotic stress","type":"exact"},{"name":"negative regulation of salinity response","type":"exact"}],"termid":"GO:1901001"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: GO:1901779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentalenolactone.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:17178094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"pentalenolactone catabolic process","synonyms":[{"name":"pentalenolactone breakdown","type":"exact"},{"name":"pentalenolactone catabolism","type":"exact"},{"name":"pentalenolactone degradation","type":"exact"}],"termid":"GO:1901779"}


id: GO:0042444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylethylamine, an amine with pharmacological properties similar to those of amphetamine, occurs naturally as a neurotransmitter in the brain, and is present in chocolate and oil of bitter almonds.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"phenylethylamine metabolic process","termid":"GO:0042443"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylethylamine biosynthetic process","synonyms":[{"name":"phenylethylamine anabolism","type":"exact"},{"name":"phenylethylamine biosynthesis","type":"exact"},{"name":"phenylethylamine formation","type":"exact"},{"name":"phenylethylamine synthesis","type":"exact"}],"termid":"GO:0042444"}


id: PBO:0063467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 1","termid":"PBO:0063467"}


id: GO:0043488
data:
  {"annotated_genes":["SJAG_16457","SJAG_01910","SJAG_01818","SJAG_03179","SJAG_01625","SJAG_01191","SJAG_00759","SJAG_04407","SJAG_02383","SJAG_02808","SJAG_04824","SJAG_03696","SJAG_01521","SJAG_02540","SJAG_05010","SJAG_03113","SJAG_00686","SJAG_01944","SJAG_03597","SJAG_04825","SJAG_00285","SJAG_03883","SJAG_04321","SJAG_04427","SJAG_02370","SJAG_00343","SJAG_00854","SJAG_05694","SJAG_04084","SJAG_03876","SJAG_02239","SJAG_00670","SJAG_04006","SJAG_02213","SJAG_02622","SJAG_00797","SJAG_03157","SJAG_00391","SJAG_02573","SJAG_04946","SJAG_00966","SJAG_01053","SJAG_04818","SJAG_05322","SJAG_03745","SJAG_04880","SJAG_04153","SJAG_03886","SJAG_03283","SJAG_02036","SJAG_04350","SJAG_05014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84564,113313],"is_not":false,"summary":null,"term":"GO:0043488"},{"annotations":[114317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[114318,86324,96169,77517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[87653,105950,105999,109537,102193,108059],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[85618,92349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[88348,111933,102522,114304,89168,92018,93349,103520,111487,98159,101313,100469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[85831,107132,114307,111193,95999,94240,92021,100472,101316,94156,89171,109383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[89507,112653,111699,86905,88038,99112,88601,88695,105267,88097,91613,94607,113194,85921,90436],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[85934,86327,87626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043488","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:1990074":null,"GO:2000815":null}}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110022],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: PBO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.16","termid":"PBO:0001174"}


id: _global:correlates_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"correlates_with","termid":"_global:correlates_with"}


id: PBO:0083541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR201C; ORF contains a putative intron","termid":"PBO:0083541"}


id: PBO:0034258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_equivalogy_relationship_with","termid":"PBO:0034258"}


id: PBO:0084215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively","termid":"PBO:0084215"}


id: SO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recognition site is bipartite and interrupted.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000284 type_I_enzyme_restriction_site (obsolete SO:0000284)","termid":"SO:0000284"}


id: GO:0052679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: terpentedienyl diphosphate = diphosphate + terpentetriene.","definition_xrefs":["RHEA:25617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"terpentetriene synthase activity","secondary_identifiers":["EC:4.2.3.36","MetaCyc:RXN-9455"],"synonyms":[{"name":"terpentedienyl-diphosphate diphosphate-lyase (terpentetriene-forming) activity","type":"exact"}],"termid":"GO:0052679"}


id: PBO:0110401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 (Er blood group)","termid":"PBO:0110401"}


id: PBO:0058968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mohawk homeobox","termid":"PBO:0058968"}


id: PBO:0065835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family","termid":"PBO:0065835"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: PBO:0108691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Spo7","termid":"PBO:0108691"}


id: PR:O43017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.03","synonyms":[{"name":"COMPASS component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-swd3","type":"exact"},{"name":"complex proteins associated with set1 protein swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43017"}


id: PBO:0085992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for survival upon exposure to K1 killer toxin","termid":"PBO:0085992"}


id: SO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration whereby the copy number of a given region is less than the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_loss","synonyms":[{"name":"copy number loss","type":"exact"},{"name":"loss","type":"related"}],"termid":"SO:0001743"}


id: PBO:0027061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endo-1,6-beta-glucosidase_activity","termid":"PBO:0027061"}


id: PBO:0046411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymin related 1","termid":"PBO:0046411"}


id: PBO:0012825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-removed_by","termid":"PBO:0012825"}


id: PR:Q9P7L6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03864","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase-like protein SPBC21C3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.07c","secondary_identifiers":["UniProtKB:Q9P7L6"],"synonyms":[{"name":"Spom972h-METTL8","type":"exact"}],"termid":"PR:Q9P7L6"}


id: PBO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 13 pseudogene","termid":"PBO:0070099"}


id: GO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"negatively_regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of (1->3)-beta-D-glucan biosynthetic process","synonyms":[{"name":"negative regulation of 1,3-beta-D-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060636"}


id: PBO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3","termid":"PBO:0042193"}


id: GO:1901577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alkane biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alkane biosynthetic process","synonyms":[{"name":"regulation of alkane anabolism","type":"exact"},{"name":"regulation of alkane biosynthesis","type":"exact"},{"name":"regulation of alkane formation","type":"exact"},{"name":"regulation of alkane synthesis","type":"exact"}],"termid":"GO:1901577"}


id: PBO:0085523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25A has a paralog, RPS25B, that arose from the whole genome duplication","termid":"PBO:0085523"}


id: PBO:0056887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake 2","termid":"PBO:0056887"}


id: PBO:0076134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase ADP-forming subunit beta","termid":"PBO:0076134"}


id: GO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside biosynthetic process","synonyms":[{"name":"deoxyribonucleoside anabolism","type":"exact"},{"name":"deoxyribonucleoside biosynthesis","type":"exact"},{"name":"deoxyribonucleoside formation","type":"exact"},{"name":"deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046120"}


id: PBO:0079680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 2","termid":"PBO:0079680"}


id: PR:Q10302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.09","synonyms":[{"name":"Spom972h-SPAC22H10.09","type":"exact"}],"termid":"PR:Q10302"}


id: PBO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS2 stomatin family member, podocin","termid":"PBO:0061315"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: PR:O94666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.08c","secondary_identifiers":["UniProtKB:O94666"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC158 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3A","type":"exact"}],"termid":"PR:O94666"}


id: PBO:0071180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 21","termid":"PBO:0071180"}


id: GO:1904307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desipramine stimulus.","definition_xrefs":["PMID:20549303","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to desipramine","termid":"GO:1904307"}


id: PBO:0071103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 105","termid":"PBO:0071103"}


id: PBO:0016072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial S-adenosylmethionine transporter (predicted)","termid":"PBO:0016072"}


id: PBO:0089519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4","termid":"PBO:0089519"}


id: GO:1900178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of aflatoxin biosynthetic process","termid":"GO:1900177"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of aflatoxin biosynthetic process","synonyms":[{"name":"down regulation of aflatoxin anabolism","type":"exact"},{"name":"down regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down regulation of aflatoxin formation","type":"exact"},{"name":"down regulation of aflatoxin synthesis","type":"exact"},{"name":"down-regulation of aflatoxin anabolism","type":"exact"},{"name":"down-regulation of aflatoxin biosynthesis","type":"exact"},{"name":"down-regulation of aflatoxin biosynthetic process","type":"exact"},{"name":"down-regulation of aflatoxin formation","type":"exact"},{"name":"down-regulation of aflatoxin synthesis","type":"exact"},{"name":"downregulation of aflatoxin anabolism","type":"exact"},{"name":"downregulation of aflatoxin biosynthesis","type":"exact"},{"name":"downregulation of aflatoxin biosynthetic process","type":"exact"},{"name":"downregulation of aflatoxin formation","type":"exact"},{"name":"downregulation of aflatoxin synthesis","type":"exact"},{"name":"inhibition of aflatoxin anabolism","type":"narrow"},{"name":"inhibition of aflatoxin biosynthesis","type":"narrow"},{"name":"inhibition of aflatoxin biosynthetic process","type":"narrow"},{"name":"inhibition of aflatoxin formation","type":"narrow"},{"name":"inhibition of aflatoxin synthesis","type":"narrow"},{"name":"negative regulation of aflatoxin anabolism","type":"exact"},{"name":"negative regulation of aflatoxin biosynthesis","type":"exact"},{"name":"negative regulation of aflatoxin formation","type":"exact"},{"name":"negative regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900178"}


id: GO:0050303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + L-lysine = NH3 + NADH + allysine.","definition_xrefs":["EC:1.4.1.18","RHEA:12408","MetaCyc:LYSINE-6-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"lysine 6-dehydrogenase activity","secondary_identifiers":["MetaCyc:PWY-5314"],"synonyms":[{"name":"L-lysine 6-dehydrogenase activity","type":"related"},{"name":"L-lysine epsilon-dehydrogenase activity","type":"related"},{"name":"L-lysine:NAD+ 6-oxidoreductase (deaminating)","type":"related"},{"name":"LysDH activity","type":"related"}],"termid":"GO:0050303"}


id: SO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding an shRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA_primary_transcript","synonyms":[{"name":"shRNA primary transcript","type":"exact"}],"termid":"SO:0002038"}


id: PR:O42970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1E8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C1E8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1E8.05","synonyms":[{"name":"Spom972h-SPBC1E8.05","type":"exact"}],"termid":"PR:O42970"}


id: GO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the anterior end of the primitive streak of the embryo that acts as the main signaling center establishing the body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the anterior end of the primitive streak","synonyms":[{"name":"Spemann organizer formation in amniotes","type":"related"},{"name":"Spemann's organizer formation at the anterior end of the primitive streak","type":"exact"},{"name":"Spemann-Mangold organizer formation at the anterior end of the primitive streak","type":"related"}],"termid":"GO:0060064"}


id: GO:0035531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 6 (CCL6).","definition_xrefs":["GOC:bf","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 6 production","termid":"GO:0035530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 6 production","secondary_identifiers":["GO:0035534","GO:0035535"],"synonyms":[{"name":"chemokine (C-C motif) ligand 6 secretion","type":"narrow"},{"name":"regulation of CCL6 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 6 secretion","type":"narrow"}],"termid":"GO:0035531"}


id: PATO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of being rigid and resistant to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hard","synonyms":[{"name":"firm","type":"related"},{"name":"impenetrable","type":"related"},{"name":"tough","type":"related"}],"termid":"PATO:0000386"}


id: PBO:0082098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7,8-diamino-pelargonic acid aminotransferase (DAPA); catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria","termid":"PBO:0082098"}


id: FYPO:0007897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process during mitosis in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during mitotic exit.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitosis","termid":"FYPO:0004355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic exit","termid":"FYPO:0007897"}


id: PBO:0091516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1","termid":"PBO:0091516"}


id: GO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor production","termid":"GO:0010575"}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: GO:0021891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron differentiation","termid":"GO:0021889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb interneuron development","termid":"GO:0021891"}


id: PBO:0066424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats","termid":"PBO:0066424"}


id: PBO:0082488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalase A; breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation","termid":"PBO:0082488"}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: PBO:0029212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dTTP_biosynthetic_process","termid":"PBO:0029212"}


id: GO:0034845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: naphthyl-2-methyl-succinyl-CoA = naphthyl-2-methylene-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"naphthyl-2-methyl-succinyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.99.-"],"termid":"GO:0034845"}


id: FYPO:0006505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip","synonyms":[{"name":"abolished protein localisation to shmoo tip","type":"exact"},{"name":"abolished protein localization to mating projection tip","type":"exact"},{"name":"protein localization to shmoo tip abolished","type":"exact"}],"termid":"FYPO:0006505"}


id: PBO:0051445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-31 (pseudogene)","termid":"PBO:0051445"}


id: GO:0030504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of inorganic diphosphate across a membrane.","definition_xrefs":["PMID:11326272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"inorganic diphosphate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5226964"],"synonyms":[{"name":"inorganic pyrophosphate transporter activity","type":"exact"}],"termid":"GO:0030504"}


id: PBO:0063404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin like 3","termid":"PBO:0063404"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: PBO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1301, pseudogene","termid":"PBO:0070005"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0031709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitophagy","termid":"PBO:0031709"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: FYPO:0008146
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115544,115546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115545,115547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of non-coding RNA transcribed measured in a cell is higher than normal.","definition_xrefs":["PMID:25989903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"termid":"FYPO:0008146","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004982":null}}


id: PBO:0041573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 204","termid":"PBO:0041573"}


id: GO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor production","termid":"GO:0090360"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["EC:4.2.99.20","RHEA:25597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: PBO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_vegetative_growth","termid":"PBO:0036011"}


id: PBO:0081143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP57 zinc finger protein","termid":"PBO:0081143"}


id: PBO:0088799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B1","termid":"PBO:0088799"}


id: PBO:0055808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 3","termid":"PBO:0055808"}


id: GO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol catabolic process","termid":"GO:0051157"},{"relation_name":"is_a","term_name":"L-arabitol metabolic process","termid":"GO:0051162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-arabitol catabolic process","synonyms":[{"name":"L-arabitol breakdown","type":"exact"},{"name":"L-arabitol catabolism","type":"exact"},{"name":"L-arabitol degradation","type":"exact"}],"termid":"GO:0051158"}


id: GO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cytidine, cytosine riboside, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cytidine transmembrane transporter activity","termid":"GO:0015212"}


id: GO:0035900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lack of contact with other members of the same species.","definition_xrefs":["GOC:bf","PMID:20203532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isolation stress","synonyms":[{"name":"response to social isolation","type":"exact"}],"termid":"GO:0035900"}


id: PBO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 pseudogene 2","termid":"PBO:0047280"}


id: GO:0047847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + phosphate = 2-deoxy-alpha-D-ribose 1-phosphate + uracil.","definition_xrefs":["RHEA:22824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-nucleoside phosphorylase activity","termid":"GO:0016154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"deoxyuridine phosphorylase activity","secondary_identifiers":["MetaCyc:DEOXYURIDINE-PHOSPHORYLASE-RXN"],"termid":"GO:0047847"}


id: FYPO:0004951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Brc1 accumulates is greater than normal.","definition_xrefs":["PMID:26368543","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Brc1 foci","synonyms":[{"name":"increased number of Brc1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Brc1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0004951"}


id: GO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C4b product of the classical complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"complement component C4b binding","termid":"GO:0001855"}


id: PBO:0068883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 123, pseudogene","termid":"PBO:0068883"}


id: PBO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 7","termid":"PBO:0070876"}


id: PBO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member E","termid":"PBO:0060872"}


id: PBO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0035848"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: PBO:0024849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for selective autophagy pathway","termid":"PBO:0024849"}


id: GO:0006468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group on to a protein.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein phosphorylation","synonyms":[{"name":"protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0006468"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00884","SJAG_00857","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102475,103306,111320],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:10770926","GOC:mah","PMID:15007098","PMID:9305914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: PBO:0088526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific disordered protein","termid":"PBO:0088526"}


id: GO:1904320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smooth muscle contraction involved in micturition.","definition_xrefs":["PMID:18562635","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction involved in micturition","termid":"GO:1904318"},{"relation_name":"positively_regulates","term_name":"smooth muscle contraction involved in micturition","termid":"GO:0060083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle contraction involved in micturition","synonyms":[{"name":"activation of smooth muscle contraction involved in micturition","type":"narrow"},{"name":"activation of smooth muscle contraction involved in urination","type":"related"},{"name":"activation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"positive regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"positive regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"up-regulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"up-regulation of smooth muscle contraction involved in urination","type":"related"},{"name":"up-regulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"},{"name":"upregulation of smooth muscle contraction involved in micturition","type":"exact"},{"name":"upregulation of smooth muscle contraction involved in urination","type":"related"},{"name":"upregulation of urinary bladder smooth muscle contraction involved in micturition","type":"related"}],"termid":"GO:1904320"}


id: FYPO:0002697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased methylenetetrahydrofolate reductase (NADPH) activity","synonyms":[{"name":"reduced methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"}],"termid":"FYPO:0002697"}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GO_REF:0000092","GOC:mengo_curators","PMID:23746261","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: PBO:0108727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleur exosome adaptor Mmi1","termid":"PBO:0108727"}


id: GO:0000480
data:
  {"annotated_genes":["SJAG_04524","SJAG_04224","SJAG_02250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95891,103686,111245],"is_not":false,"summary":null,"term":"GO:0000480"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.","definition_xrefs":["GOC:curators","PMID:10690410","PMID:15282326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A-prime","type":"narrow"},{"name":"endonucleolytic cleavage at A0","type":"narrow"}],"termid":"GO:0000480","terms_by_termid":{"GO:0000480":null}}


id: PBO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase), Dnf1 (predicted)","termid":"PBO:0017557"}


id: GO:0102904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = germacrene C + diphosphoric acid.","definition_xrefs":["EC:4.2.3.60","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"germacrene C synthase activity","secondary_identifiers":["MetaCyc:RXN-8561","RHEA:28302"],"termid":"GO:0102904"}


id: PBO:0061068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB activating protein like","termid":"PBO:0061068"}


id: GO:0080070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-methylthiooctyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 8-methylthiooctyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4333"],"termid":"GO:0080070"}


id: FYPO:0004465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to camptothecin","synonyms":[{"name":"normal protein phosphorylation during cellular response to CPT","type":"exact"},{"name":"normal protein phosphorylation during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004465"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: PBO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta3","termid":"PBO:0003260"}


id: PBO:0070347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 20","termid":"PBO:0070347"}


id: PBO:0029788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-signal_recognition_particles_present_in_decreased_numbers","termid":"PBO:0029788"}


id: PBO:0029001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_at_dh_repeat","termid":"PBO:0029001"}


id: PBO:0064270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G4","termid":"PBO:0064270"}


id: FYPO:0002774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during vegetative growth","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during vegetative growth","type":"related"},{"name":"increased level of ubiquitinated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased ubiquitinated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0002774"}


id: GO:0030801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclic nucleotide metabolic process (obsolete GO:0030801)","synonyms":[{"name":"activation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"positive regulation of cyclic nucleotide metabolism","type":"exact"},{"name":"stimulation of cyclic nucleotide metabolic process","type":"narrow"},{"name":"up regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"up-regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"upregulation of cyclic nucleotide metabolic process","type":"exact"}],"termid":"GO:0030801"}


id: PBO:0064166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G4C antisense RNA 1","termid":"PBO:0064166"}


id: GO:0032772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a tyrosinase enzyme.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monooxygenase activity","termid":"GO:0032769"},{"relation_name":"is_a","term_name":"regulation of tyrosinase activity","termid":"GO:0032771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosinase activity","synonyms":[{"name":"down regulation of monophenol oxygenase activity","type":"exact"},{"name":"down-regulation of monophenol oxygenase activity","type":"exact"},{"name":"downregulation of monophenol oxygenase activity","type":"exact"},{"name":"inhibition of monophenol oxygenase activity","type":"narrow"},{"name":"negative regulation of monophenol monooxygenase activity","type":"related"},{"name":"negative regulation of monophenol oxygenase activity","type":"exact"}],"termid":"GO:0032772"}


id: FYPO:0007183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased protein kinase activity during mitotic interphase","synonyms":[{"name":"increased protein kinase activity during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007183"}


id: PBO:0055002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2417","termid":"PBO:0055002"}


id: PBO:0030321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_palmitoyl-CoA_ligase_activity","termid":"PBO:0030321"}


id: PBO:0084528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the lipid-translocating exporter (LTE) family; present in multiple copies associated with SUC telomeric loci, amplified in yeasts used for industrial biomass or ethanol production with molasses as substrate","termid":"PBO:0084528"}


id: PBO:0059311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 2","termid":"PBO:0059311"}


id: PBO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0004598"}


id: PBO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 2","termid":"PBO:0044691"}


id: PBO:0082966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying positive-strand RNA virus replication; null mutation confers sensitivity to tunicamycin and DTT","termid":"PBO:0082966"}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: PR:Q9UTM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C144.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.01","synonyms":[{"name":"Spom972h-SPAC144.01","type":"exact"}],"termid":"PR:Q9UTM1"}


id: PBO:0087598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; green fluorescent protein (GFP)-fusion protein localizes to the endosome","termid":"PBO:0087598"}


id: PBO:0013783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Spa2 (predicted)","termid":"PBO:0013783"}


id: PBO:0059646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 12","termid":"PBO:0059646"}


id: GO:0075510
data:
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id: PBO:0018065
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id: GO:0042993
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id: PBO:0051538
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id: PBO:0030989
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id: PATO:0000577
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id: GO:0009438
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id: SO:0001417
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id: PBO:0043895
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id: GO:0005815
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id: MOD:01534
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id: PBO:0003932
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id: GO:0032573
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id: GO:0007093
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signaling process that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"mitotic cell cycle 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cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072474","GO:0072413","GO:0031575","GO:0071780","GO:0072456"],"synonyms":[{"name":"mitotic cell cycle checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"related"},{"name":"signal transduction involved in mitotic G2/M transition checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle G1/S checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0007093","terms_by_termid":{"GO:0007094":null,"GO:0007095":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0044773":null,"GO:0044878":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pseudohyphal_growth","termid":"PBO:0031661"}


id: GO:0102358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 7,8-dihydroxycoumarin = S-adenosyl-L-homocysteine + 7-hydroxy-8-methoxycoumarin + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"daphnetin-8-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13448"],"termid":"GO:0102358"}


id: PBO:0111903
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0111903"}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: GO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA localization","synonyms":[{"name":"establishment and maintenance of mitochondrial RNA localization","type":"exact"},{"name":"mitochondrial RNA localisation","type":"exact"},{"name":"mtRNA localization","type":"exact"}],"termid":"GO:0019093"}


id: FYPO:0005106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of Lys63-specific deubiquitinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal Lys63-specific deubiquitinase activity","termid":"FYPO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased Lys63-specific deubiquitinase activity","synonyms":[{"name":"reduced Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"FYPO:0005106"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: PBO:0043975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrosarcoma associated gene 1","termid":"PBO:0043975"}


id: PBO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tyrosine_import","termid":"PBO:0031158"}


id: GO:0038165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by oncostatin-M (OSM) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. OSM can signal via at least two different receptors (a specific receptor and a LIF receptor) to activate different downstream signal transduction pathways.","definition_xrefs":["GOC:nhn","GOC:signaling","PMID:10579456","PMID:12811586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"oncostatin-M-mediated signaling pathway","synonyms":[{"name":"OSM signaling pathway","type":"exact"},{"name":"oncostatin-M signaling pathway","type":"exact"}],"termid":"GO:0038165"}


id: PBO:0057292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 510","termid":"PBO:0057292"}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: GO:0050510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["EC:2.4.1.226","MetaCyc:2.4.1.226-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-16324","Reactome:R-HSA-3595178","Reactome:R-HSA-9632034","Reactome:R-HSA-1971491"],"synonyms":[{"name":"N-acetylgalactosaminyl-proteoglycan 3-b-glucuronosyltransferase activity","type":"exact"},{"name":"alpha-D-glucuronate:N-acetyl-beta-D-galactosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 3-beta-glucuronosyltransferase activity","type":"related"},{"name":"chondroitin glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050510"}


id: PBO:0080505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL divergent transcript","termid":"PBO:0080505"}


id: PBO:0078685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-1","termid":"PBO:0078685"}


id: FYPO:0003287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested during the first meiotic interphase, before premeiotic DNA replication has taken place.","definition_xrefs":["PomBase:mah","GO:0051328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiotic cell cycle","termid":"FYPO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic interphase before premeiotic DNA replication","synonyms":[{"name":"abnormal cell cycle arrest in meiotic interphase preceding premeiotic DNA replication","type":"exact"},{"name":"abnormal meiotic cell cycle arrest in interphase before premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0003287"}


id: PR:Q9Y7M8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC9B6.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7M8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease C9B6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.11c","synonyms":[{"name":"Spom972h-SPBC9B6.11c","type":"exact"}],"termid":"PR:Q9Y7M8"}


id: PBO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-thialysine","termid":"PBO:0030142"}


id: FYPO:0002474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to double-strand break site","synonyms":[{"name":"decreased protein localisation to double-strand break site","type":"exact"},{"name":"decreased protein localization to DSB site","type":"exact"},{"name":"decreased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased protein localization to site of double-strand break","type":"exact"},{"name":"reduced protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0002474"}


id: GO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion.","definition_xrefs":["PMID:14991701","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes","synonyms":[{"name":"gene conversion of antibody genes","type":"exact"}],"termid":"GO:0002206"}


id: PBO:0004592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Pvg4 (predicted)","termid":"PBO:0004592"}


id: PR:O13799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C17H9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.02","synonyms":[{"name":"Spom972h-mtl1","type":"exact"}],"termid":"PR:O13799"}


id: GO:0106110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of type B trichothecene vomitoxin, also known as deoxynivalenol, a poisonous substance produced by some species of fungi and predominantly occurs in grains such as wheat, barley and oats.","definition_xrefs":["PMID:25680507","PMID:19333439","PMID:8637056","PMID:25758923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"vomitoxin biosynthetic process","synonyms":[{"name":"DON biosynthetic process","type":"exact"},{"name":"deoxynivalenol biosynthetic process","type":"exact"},{"name":"vomitoxin anabolism","type":"exact"},{"name":"vomitoxin biosynthesis","type":"exact"},{"name":"vomitoxin formation","type":"exact"},{"name":"vomitoxin synthesis","type":"exact"}],"termid":"GO:0106110"}


id: PBO:0110417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNCRIP pseudogene 1","termid":"PBO:0110417"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: PBO:0087918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for septum destruction after cytokinesis; part of the RAM network that regulates polarity and morphogenesis; NES phosphorylation by RAM network kinase Cbk1p blocks nuclear exit in mother cells during the M/G1 transition, causing asymmetric localization to daughter cell nuclei, and increased Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; Spt16p is required for nuclear exclusion during G1","termid":"PBO:0087918"}


id: PBO:0069849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1135, pseudogene","termid":"PBO:0069849"}


id: PBO:0049654
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id: PBO:0072083
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id: FYPO:0007909
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id: GO:0035630
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id: PBO:0001089
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id: GO:0047626
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id: GO:0010211
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id: GO:0070331
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id: PBO:0090806
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id: GO:0031982
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id: GO:0033864
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id: PBO:0049414
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id: PR:Q9Y806
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC146.04 gene.","definition_xrefs":["UniProtKB:Q9Y806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-linked sulfhydryl oxidase erv2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.04","synonyms":[{"name":"Spom972h-SPBC146.04","type":"exact"}],"termid":"PR:Q9Y806"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: GO:0070822
data:
  {"annotated_genes":["SJAG_00868","SJAG_01804","SJAG_03884","SJAG_00581","SJAG_03441","SJAG_00441","SJAG_02981","SJAG_04758","SJAG_03255","SJAG_02846","SJAG_03867","SJAG_01110","SJAG_01230","SJAG_04576","SJAG_03230","SJAG_02439","SJAG_00349"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74795,110287,91549,85247,101079,105531,106536,100777,90741,99928,102807,98857,77857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[85928,90405,91551,89881,91987,105533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"Any of a number of evolutionarily conserved histone deacetylase complexes (HDACs) containing a core consisting of a paired amphipathic helix motif protein (e.g. Sin3p in S. cerevisiae, Pst1 in S. pombe or Sin3A in mammals) at least one class I histone deacetylase (e.g. Rpd3p in S. cerevisiae, Clr6 in S. pombe, or HDAC1 and HDAC2 in mammals), and at least one WD40 repeat protein (e.g. Ume1p in S. cerevisiae, Prw1 in S. pombe, or RbAp46 and RbAp48 in mammals). These complexes also contain a variable number of other proteins that direct histone binding, DNA binding, or add other functionality to the complex.","definition_xrefs":["PMID:18292778","PMID:15565322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01804":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Sin3-type complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070822","terms_by_termid":{"GO:0032221":null,"GO:0033698":null}}


id: GO:1900155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"negatively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone trabecula formation","synonyms":[{"name":"down regulation of bone trabecula biogenesis","type":"related"},{"name":"down regulation of bone trabecula formation","type":"exact"},{"name":"down regulation of bone trabeculation","type":"exact"},{"name":"down regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down regulation of skeletal trabecula formation","type":"exact"},{"name":"down regulation of skeletal trabeculation","type":"exact"},{"name":"down-regulation of bone trabecula biogenesis","type":"related"},{"name":"down-regulation of bone trabecula formation","type":"exact"},{"name":"down-regulation of bone trabeculation","type":"exact"},{"name":"down-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down-regulation of skeletal trabecula formation","type":"exact"},{"name":"down-regulation of skeletal trabeculation","type":"exact"},{"name":"downregulation of bone trabecula biogenesis","type":"related"},{"name":"downregulation of bone trabecula formation","type":"exact"},{"name":"downregulation of bone trabeculation","type":"exact"},{"name":"downregulation of skeletal trabecula biogenesis","type":"related"},{"name":"downregulation of skeletal trabecula formation","type":"exact"},{"name":"downregulation of skeletal trabeculation","type":"exact"},{"name":"inhibition of bone trabecula biogenesis","type":"related"},{"name":"inhibition of bone trabecula formation","type":"narrow"},{"name":"inhibition of bone trabeculation","type":"narrow"},{"name":"inhibition of skeletal trabecula biogenesis","type":"related"},{"name":"inhibition of skeletal trabecula formation","type":"narrow"},{"name":"inhibition of skeletal trabeculation","type":"narrow"},{"name":"negative regulation of bone trabecula biogenesis","type":"related"},{"name":"negative regulation of bone trabeculation","type":"exact"},{"name":"negative regulation of skeletal trabecula biogenesis","type":"related"},{"name":"negative regulation of skeletal trabecula formation","type":"exact"},{"name":"negative regulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900155"}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: PBO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030633"}


id: RO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_at_point","termid":"RO:0002593"}


id: GO:0050909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of taste","secondary_identifiers":["Wikipedia:Taste"],"synonyms":[{"name":"gustation","type":"exact"},{"name":"sense of taste","type":"exact"},{"name":"taste","type":"exact"},{"name":"taste perception","type":"exact"}],"termid":"GO:0050909"}


id: FYPO:0006750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during nitrogen starvation","termid":"FYPO:0001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal pre-tRNA level during nitrogen starvation","synonyms":[{"name":"normal pre-tRNA accumulation during nitrogen starvation","type":"related"},{"name":"normal pre-tRNA level during nitrogen depletion","type":"exact"},{"name":"normal pre-tRNA level during nitrogen deprivation","type":"exact"},{"name":"normal pre-tRNA transcript level during nitrogen starvation","type":"exact"},{"name":"normal tRNA level during nitrogen starvation","type":"broad"},{"name":"normal tRNA primary transcript level during nitrogen starvation","type":"exact"},{"name":"normal transfer RNA precursor level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006750"}


id: PBO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisie STM1","termid":"PBO:0013114"}


id: GO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a transcription factor TFIIIB complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"transcription factor TFIIIB complex assembly","synonyms":[{"name":"TFIIIB assembly","type":"exact"}],"termid":"GO:0070217"}


id: PR:Q9Y7Z8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin-If that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.13c","secondary_identifiers":["UniProtKB:Q9Y7Z8"],"synonyms":[{"name":"SPBC146.13c","type":"related"},{"name":"Spom972h-MYO1F","type":"exact"},{"name":"class I unconventional myosin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I myosin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Z8"}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: PBO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 9","termid":"PBO:0070779"}


id: PBO:0004678
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.193","termid":"PBO:0004678"}


id: PBO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin A","termid":"PBO:0042998"}


id: PBO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_respiration","termid":"PBO:0031646"}


id: PR:Q9UTR8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red1 gene.","definition_xrefs":["UniProtKB:Q9UTR8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein red1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.03c","synonyms":[{"name":"RNA elimination defective protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-red1","type":"exact"}],"termid":"PR:Q9UTR8"}


id: PBO:0057643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1234","termid":"PBO:0057643"}


id: PATO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001125 absolute pressure value (obsolete PATO:0001125)","termid":"PATO:0001125"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: PBO:0052811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 77","termid":"PBO:0052811"}


id: PBO:0030137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GTPase_activity","termid":"PBO:0030137"}


id: PBO:0057497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 615","termid":"PBO:0057497"}


id: FYPO:0004809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["PMID:25543137","GO:0070829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"reduced duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0004809"}


id: GO:0072055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal cortex over time, from its formation to the mature structure. The renal cortex is the outer region of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal cortex development","termid":"GO:0072055"}


id: PBO:0045675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNC1LI2 divergent transcript","termid":"PBO:0045675"}


id: GO:0021974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the trigeminothalamic tract, one of the major routes of nociceptive and temperature signaling from the face.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminothalamic tract morphogenesis","termid":"GO:0021974"}


id: PBO:0083133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity mitochondrial citrate and methylcitrate synthase; catalyzes the condensation of acetyl-CoA and oxaloacetate to form citrate and that of propionyl-CoA and oxaloacetate to form 2-methylcitrate","termid":"PBO:0083133"}


id: PBO:0053541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 545","termid":"PBO:0053541"}


id: GO:0009989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition that involves the interaction of the cell with the extracellular matrix.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-matrix recognition","termid":"GO:0009989"}


id: GO:0010349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactose + NAD+ = L-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["RHEA:31559","PMID:12047629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-galactose dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-1884","EC:1.1.1.316"],"synonyms":[{"name":"L-galactose 1-dehydrogenase activity","type":"related"}],"termid":"GO:0010349"}


id: GO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a granulocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["CL:0000094","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte activation","termid":"GO:0036230"}


id: PBO:0083888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of nuclear pore complex (NPC); also part of the NPC nuclear basket; contributes directly to nucleocytoplasmic transport; involved in regulation of transcription and mitosis; induces membrane tubulation, which may contribute to nuclear pore assembly; NUP53 has a paralog, ASM4, that arose from the whole genome duplication","termid":"PBO:0083888"}


id: GO:0047072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-carboxy-cis,cis-muconate + 2 H+.","definition_xrefs":["RHEA:15369","EC:1.13.11.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01506","MetaCyc:1.13.11.28-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate 2,3-oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047072"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: PBO:0075648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 3","termid":"PBO:0075648"}


id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: PBO:0079889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine phosphorylase 2","termid":"PBO:0079889"}


id: PBO:0069511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 780, pseudogene","termid":"PBO:0069511"}


id: PBO:0079149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 10","termid":"PBO:0079149"}


id: GO:0071291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from selenium ion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to selenium ion","termid":"GO:0010269"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to selenium ion","termid":"GO:0071291"}


id: PBO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 125","termid":"PBO:0075075"}


id: GO:1905476
data:
  {"annotated_genes":["SJAG_03970","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[91956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:26911690","GOC:bc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"negatively_regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation in membrane","type":"exact"},{"name":"down regulation of protein localization in membrane","type":"exact"},{"name":"down regulation of protein localization to membrane","type":"exact"},{"name":"down-regulation of protein localisation in membrane","type":"exact"},{"name":"down-regulation of protein localization in membrane","type":"exact"},{"name":"down-regulation of protein localization to membrane","type":"exact"},{"name":"downregulation of protein localisation in membrane","type":"exact"},{"name":"downregulation of protein localization in membrane","type":"exact"},{"name":"downregulation of protein localization to membrane","type":"exact"},{"name":"inhibition of protein localisation in membrane","type":"narrow"},{"name":"inhibition of protein localization in membrane","type":"narrow"},{"name":"inhibition of protein localization to membrane","type":"narrow"},{"name":"negative regulation of protein localisation in membrane","type":"exact"},{"name":"negative regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905476","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0003234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19 (predicted)","termid":"PBO:0003234"}


id: PBO:0082114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA carboxylase, biotin containing enzyme; catalyzes carboxylation of cytosolic acetyl-CoA to form malonyl-CoA and regulates histone acetylation by regulating the availability of acetyl-CoA; rate-limiting step for de novo biosynthesis of long-chain fatty acids; translational regulation in response to nutrients and cell cycle stage depends on its upstream ORF; ACC1 has a paralog, HFA1, that arose from the whole genome duplication","termid":"PBO:0082114"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: PBO:0051983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 2","termid":"PBO:0051983"}


id: GO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface binding (obsolete GO:0043498)","synonyms":[{"name":"cell surface binding","type":"exact"}],"termid":"GO:0043498"}


id: PBO:0086070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; based on co-purification experiments; homolog of human BAP31 protein; YET2 has a paralog, YET1, that arose from the whole genome duplication","termid":"PBO:0086070"}


id: PBO:0029540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_spheroid_cells_(obsolete_FYPO:0002182)","termid":"PBO:0029540"}


id: GO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box H + ACA snoRNP protein (obsolete GO:0005735)","synonyms":[{"name":"box H + ACA snoRNP protein","type":"exact"}],"termid":"GO:0005735"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: PBO:0077878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid peroxidase","termid":"PBO:0077878"}


id: GO:0010860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of the proteasome complex. The proteasome complex performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome regulator activity (obsolete GO:0010860)","synonyms":[{"name":"proteasome regulator activity","type":"exact"}],"termid":"GO:0010860"}


id: GO:0120203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a rod photoreceptor cell disc membrane.","definition_xrefs":["PMID:19501669","GOC:pde","PMID:26574505","PMID:6771304","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle lumen","termid":"GO:0043233"},{"relation_name":"part_of","term_name":"rod photoreceptor outer segment","termid":"GO:0120200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod photoreceptor disc lumen","termid":"GO:0120203"}


id: GO:0044053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by a symbiont organism to a location within the host cell cytoplasm.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of peptides or proteins into host","termid":"GO:0042000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into host cell cytoplasm","synonyms":[{"name":"translocation of symbiont peptides or proteins into host cell cytoplasm","type":"exact"},{"name":"transport of peptides or proteins into host cell cytoplasm","type":"exact"}],"termid":"GO:0044053"}


id: FYPO:0000692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: PR:G2TRT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.17","synonyms":[{"name":"Spom972h-SPCC1235.17","type":"exact"}],"termid":"PR:G2TRT7"}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: FYECO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the external environment in which an experiment is conducted.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping experimental environment","termid":"FYECO:0000132"}


id: PBO:0087077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L38; homologous to mammalian ribosomal protein L38, no bacterial homolog","termid":"PBO:0087077"}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: GO:0021979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of cells that will contribute to the structure and function of the hypothalamus.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","GOC:mgi_curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hypothalamus development","termid":"GO:0021854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus cell differentiation","termid":"GO:0021979"}


id: PBO:0087803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; predicted to be palmitoylated; has similarity to hydrophilins, which are involved in the adaptive response to hyperosmotic conditions; YBR016W has a paralog, YDL012C, that arose from the whole genome duplication","termid":"PBO:0087803"}


id: PBO:0078296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-1","termid":"PBO:0078296"}


id: FYPO:0006045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid biorientation begins later than normal.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid biorientation","termid":"FYPO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid biorientation","synonyms":[{"name":"delayed mitotic sister chromatid biorientation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid biorientation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"mitotic sister chromatid biorientation delayed","type":"exact"}],"termid":"FYPO:0006045"}


id: PATO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's being incapable perceiving differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indiscriminate","termid":"PATO:0001318"}


id: PR:Q50HP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q50HP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.22c","synonyms":[{"name":"Spom972h-dad4","type":"exact"},{"name":"outer kinetochore protein dad4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q50HP4"}


id: GO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in cardiac neural crest cell differentiation.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac neural crest cell differentiation involved in heart development (obsolete GO:0061310)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"}],"termid":"GO:0061310"}


id: PBO:0111936
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0111936"}


id: PBO:0084972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glycerol 3-phosphate dehydrogenase; expression is controlled by an oxygen-independent signaling pathway required to regulate metabolism under anoxic conditions; located in cytosol and mitochondria; constitutively active but is inactivated via phosphorylation by energy-stress responsive kinase SNF1; GPD2 has a paralog, GPD1, that arose from the whole genome duplication","termid":"PBO:0084972"}


id: PATO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000127 relative mass (obsolete PATO:0000127)","termid":"PATO:0000127"}


id: GO:0050292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + O2 + pregna-4,9(11)-diene-3,20-dione = 9,11alpha-epoxypregn-4-ene-3,20-dione + A + H2O.","definition_xrefs":["RHEA:19557","EC:1.14.99.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"steroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04392","MetaCyc:STEROID-9-ALPHA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"steroid 9-alpha-hydroxylase activity","type":"related"},{"name":"steroid 9a-monooxygenase activity","type":"exact"},{"name":"steroid 9alpha-hydroxylase activity","type":"related"},{"name":"steroid 9alpha-monooxygenase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (9-epoxidizing)","type":"related"}],"termid":"GO:0050292"}


id: PBO:0051393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 1","termid":"PBO:0051393"}


id: GO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"}


id: GO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002856"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"}],"termid":"GO:0002859"}


id: FYPO:0005531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is decreased.","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"decreased protein localisation to chromatin at boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at boundary element IRC1L","type":"exact"}],"termid":"FYPO:0005531"}


id: PBO:0091941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acid amide hydrolase","termid":"PBO:0091941"}


id: GO:1904137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"down regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in notochord morphogenesis","type":"narrow"}],"termid":"GO:1904137"}


id: GO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. An example of this component is found in Mus musculus.","definition_xrefs":["PMID:9395502","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0019910"}


id: GO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the collagen and cuticulin-based cuticle extracellular matrix, a collagen and cuticulin-based noncellular, multilayered structure that is synthesized by an underlying ectodermal (hypodermal) cell layer.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete collagen and cuticulin-based cuticle extracellular matrix part (obsolete GO:0060103)","termid":"GO:0060103"}


id: GO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the symbiont plasma membrane and the extrahaustorial membrane of the host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"host extracellular space","termid":"GO:0043655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extrahaustorial matrix","termid":"GO:0085036"}


id: GO:0032681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of lymphotoxin A production","secondary_identifiers":["GO:0043016"],"synonyms":[{"name":"regulation of LTA production","type":"exact"},{"name":"regulation of TNF-beta production","type":"exact"},{"name":"regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"regulation of lymphotoxin-alpha production","type":"exact"},{"name":"regulation of tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032681"}


id: FYPO:0003189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein import into the nucleus is decreased. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclear import","termid":"FYPO:0000515"},{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein import into nucleus during vegetative growth","termid":"FYPO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein import into nucleus","synonyms":[{"name":"decreased protein import into nucleus during mitotic cell cycle","type":"related"},{"name":"decreased protein import into nucleus during vegetative growth","type":"exact"},{"name":"reduced protein import into nucleus","type":"exact"}],"termid":"FYPO:0003189"}


id: PR:Q9Y7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L15, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12934:SF1","PRO:DNx","OMA:SCHPO03015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.06","secondary_identifiers":["UniProtKB:Q9Y7M5"],"synonyms":[{"name":"Spom972h-MRPL15","type":"exact"}],"termid":"PR:Q9Y7M5"}


id: PBO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_without_elongation","termid":"PBO:0035762"}


id: GO:1902219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:mtg_apoptosis","PMID:14569084","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"narrow"}],"termid":"GO:1902219"}


id: GO:1900706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of siderophore biosynthetic process","termid":"GO:1900704"},{"relation_name":"positively_regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of siderophore biosynthetic process","synonyms":[{"name":"activation of siderochrome biosynthesis","type":"narrow"},{"name":"activation of siderochrome biosynthetic process","type":"narrow"},{"name":"activation of siderophore anabolism","type":"exact"},{"name":"activation of siderophore biosynthesis","type":"exact"},{"name":"activation of siderophore biosynthetic process","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of siderophore formation","type":"exact"},{"name":"activation of siderophore synthesis","type":"exact"},{"name":"positive regulation of siderochrome biosynthesis","type":"narrow"},{"name":"positive regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"positive regulation of siderophore anabolism","type":"exact"},{"name":"positive regulation of siderophore biosynthesis","type":"exact"},{"name":"positive regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of siderophore formation","type":"exact"},{"name":"positive regulation of siderophore synthesis","type":"exact"},{"name":"up regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up regulation of siderophore anabolism","type":"exact"},{"name":"up regulation of siderophore biosynthesis","type":"exact"},{"name":"up regulation of siderophore biosynthetic process","type":"exact"},{"name":"up regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of siderophore formation","type":"exact"},{"name":"up regulation of siderophore synthesis","type":"exact"},{"name":"up-regulation of siderochrome biosynthesis","type":"narrow"},{"name":"up-regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"up-regulation of siderophore anabolism","type":"exact"},{"name":"up-regulation of siderophore biosynthesis","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process","type":"exact"},{"name":"up-regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of siderophore formation","type":"exact"},{"name":"up-regulation of siderophore synthesis","type":"exact"},{"name":"upregulation of siderochrome biosynthesis","type":"narrow"},{"name":"upregulation of siderochrome biosynthetic process","type":"narrow"},{"name":"upregulation of siderophore anabolism","type":"exact"},{"name":"upregulation of siderophore biosynthesis","type":"exact"},{"name":"upregulation of siderophore biosynthetic process","type":"exact"},{"name":"upregulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of siderophore formation","type":"exact"},{"name":"upregulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900706"}


id: PR:O59743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.07c gene.","definition_xrefs":["UniProtKB:O59743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C530.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.07c","synonyms":[{"name":"Spom972h-SPBC530.07c","type":"exact"}],"termid":"PR:O59743"}


id: GO:0045450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which bicoid mRNA is transported to and maintained within the oocyte as part of the specification of the anterior/posterior axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicoid mRNA localization","synonyms":[{"name":"bicoid mRNA localisation","type":"exact"},{"name":"establishment and maintenance of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045450"}


id: PBO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 4","termid":"PBO:0060482"}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: PBO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 subunit Bit61","termid":"PBO:0005564"}


id: MOD:01506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889","Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"},{"relation_name":"is_a","term_name":"mTRAQ reporter+balance reagent acylated residue","termid":"MOD:01863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"}],"termid":"MOD:01506"}


id: PBO:0082480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carboxyl methyltransferase; methylates the C terminus of the protein phosphatase 2A catalytic subunit (Pph21p or Pph22p), which is important for complex formation with regulatory subunits; required for methionine to inhibit autophagy and promote growth","termid":"PBO:0082480"}


id: PBO:0085347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase B (lysophospholipase) involved in lipid metabolism; required for efficient acyl chain remodeling of newly synthesized phosphatidylethanolamine-derived phosphatidylcholine; required for deacylation of phosphatidylcholine and phosphatidylethanolamine but not phosphatidylinositol; PLB1 has a paralog, PLB3, that arose from the whole genome duplication","termid":"PBO:0085347"}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: PR:P42656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.02c","synonyms":[{"name":"Spom972h-rad24","type":"exact"}],"termid":"PR:P42656"}


id: PBO:0066844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 144","termid":"PBO:0066844"}


id: GO:1901194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0010467","GO:0002181","GO:0044085"],"is_obsolete":false,"name":"negative regulation of formation of translation preinitiation complex","synonyms":[{"name":"down regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down regulation of translation preinitiation complex assembly","type":"exact"},{"name":"down-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"down-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"down-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"downregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"downregulation of formation of translation preinitiation complex","type":"exact"},{"name":"downregulation of translation preinitiation complex assembly","type":"exact"},{"name":"inhibition of formation of translation pre-initiation complex","type":"exact"},{"name":"inhibition of formation of translation preinitiation complex","type":"narrow"},{"name":"inhibition of translation preinitiation complex assembly","type":"exact"},{"name":"negative regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"negative regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901194"}


id: GO:1903936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","PMID:18674524","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium arsenite","termid":"GO:1903935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium arsenite","termid":"GO:1903936"}


id: PBO:0054036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1370","termid":"PBO:0054036"}


id: GO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-33 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-33 receptor activity","synonyms":[{"name":"IL-33 receptor activity","type":"exact"},{"name":"IL-33R","type":"exact"}],"termid":"GO:0002114"}


id: GO:1904789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring maintenance.","definition_xrefs":["GO_REF:0000058","PMID:24115772","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring maintenance (obsolete GO:1904789)","synonyms":[{"name":"regulation of contractile ring maintenance involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, contractile ring maintenance, involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1904789"}


