# terms

id: GO:0042567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins, which in animals is approximately 150kDa and consists of the insulin-like growth factor (IGF), the insulin-like growth factor binding protein-3 (IGFBP-3), or -5 (IGFBP-5) and an acid-labile subunit (ALS). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"insulin-like growth factor ternary complex","synonyms":[{"name":"IGF ternary complex","type":"exact"}],"termid":"GO:0042567"}


id: GO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of metal ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete metal ion homeostasis (obsolete GO:0055065)","termid":"GO:0055065"}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: GO:1901236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 4-(trimethylammonio)butanoate from one side of a membrane to the other.","definition_xrefs":["PMID:16952940","GOC:TermGenie","PMID:21784948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transmembrane transporter activity","secondary_identifiers":["RHEA:32835"],"termid":"GO:1901236"}


id: GO:0010076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of floral meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral meristem identity","termid":"GO:0010076"}


id: PBO:0070914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 22","termid":"PBO:0070914"}


id: GO:0008985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyruvate + ferricytochrome b1 + H2O = CO2 + acetate + ferrocytochrome b1.","definition_xrefs":["EC:1.2.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate dehydrogenase (cytochrome) activity (obsolete GO:0008985)","synonyms":[{"name":"pyruvate dehydrogenase (cytochrome) activity","type":"exact"},{"name":"pyruvate:ferricytochrome-b1 oxidoreductase activity","type":"related"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic (cytochrome b1) dehydrogenase activity","type":"related"}],"termid":"GO:0008985"}


id: GO:0008476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate.","definition_xrefs":["EC:2.8.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-tyrosine sulfotransferase activity","secondary_identifiers":["MetaCyc:PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-9668023","Reactome:R-HSA-9668148","RHEA:16801","Reactome:R-HSA-8954262"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:protein-tyrosine O-sulfotransferase activity","type":"related"},{"name":"protein-tyrosine sulphotransferase activity","type":"exact"},{"name":"tyrosylprotein sulfotransferase activity","type":"related"}],"termid":"GO:0008476"}


id: PR:O14181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.05c","synonyms":[{"name":"Spom972h-mrpl28","type":"exact"}],"termid":"PR:O14181"}


id: PBO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 1","termid":"PBO:0050540"}


id: GO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"}


id: GO:1900748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"activation of VEGF signaling","type":"exact"},{"name":"activation of VEGF-activated signaling pathway","type":"exact"},{"name":"activation of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"activation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"positive regulation of VEGF signaling","type":"exact"},{"name":"positive regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up regulation of VEGF signaling","type":"exact"},{"name":"up regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up-regulation of VEGF signaling","type":"exact"},{"name":"up-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"upregulation of VEGF signaling","type":"exact"},{"name":"upregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900748"}


id: PR:Q09806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.04 gene.","definition_xrefs":["UniProtKB:Q09806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.04","synonyms":[{"name":"Spom972h-SPAC2G11.04","type":"exact"}],"termid":"PR:Q09806"}


id: PBO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase (predicted)","termid":"PBO:0002377"}


id: PBO:0075732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 divergent transcript","termid":"PBO:0075732"}


id: PBO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2B","termid":"PBO:0080111"}


id: PBO:0056591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor domain containing 2","termid":"PBO:0056591"}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: PBO:0040771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 6","termid":"PBO:0040771"}


id: PBO:0070395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 2","termid":"PBO:0070395"}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: GO:0003923
data:
  {"annotated_genes":["SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110006],"is_not":false,"summary":null,"term":"GO:0003923"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor.","definition_xrefs":["ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"GPI-anchor transamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162836"],"termid":"GO:0003923","terms_by_termid":{"GO:0003923":null}}


id: PBO:0080986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 2","termid":"PBO:0080986"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: MOD:01287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15602776","PubMed:11857757","Unimod:364#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","termid":"MOD:00789"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:01287"}


id: PBO:0050503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 3","termid":"PBO:0050503"}


id: PBO:0065090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKACB divergent transcript","termid":"PBO:0065090"}


id: GO:0110114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:27365390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of lipid transporter activity","termid":"GO:0110112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid transporter activity","termid":"GO:0110114"}


id: PBO:0036047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036047"}


id: PBO:0048180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein 1","termid":"PBO:0048180"}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: PBO:0111681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARG pseudogene 1","termid":"PBO:0111681"}


id: PBO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 81 pseudogene","termid":"PBO:0070167"}


id: PBO:0018062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc8 (predicted)","termid":"PBO:0018062"}


id: GO:1903391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adherens junction organization.","definition_xrefs":["GOC:TermGenie","PMID:21724833","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adherens junction organization","synonyms":[{"name":"regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"regulation of adherens junction organisation","type":"exact"}],"termid":"GO:1903391"}


id: GO:0099509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099509"}


id: PBO:0078697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 8-1","termid":"PBO:0078697"}


id: PBO:0035850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_rDNA_during_vegetative_growth","termid":"PBO:0035850"}


id: PBO:0002962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1 (predicted)","termid":"PBO:0002962"}


id: PBO:0054193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1568","termid":"PBO:0054193"}


id: GO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vinculin-containing myofibril attachment structure of striated muscle that connects sarcomeres to the extracellular matrix. In nematode body wall muscle, the dense body performs the dual role of Z-disk and costamere.","definition_xrefs":["PMID:17492481","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle dense body","termid":"GO:0055120"}


id: GO:0006121
data:
  {"annotated_genes":["SJAG_01671","SJAG_02398","SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84962,85324,109256,112802],"is_not":false,"summary":null,"term":"GO:0006121"}]},"cv_name":"biological_process","definition":"The transfer of electrons from succinate to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex II.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"mitochondrial electron transport, succinate to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex II (succinate to ubiquinone)","type":"related"},{"name":"mitochondrial electron transport, succinate to coenzyme Q","type":"exact"},{"name":"oxidative phosphorylation, succinate to ubiquinone","type":"exact"}],"termid":"GO:0006121","terms_by_termid":{"GO:0006121":null}}


id: PBO:0111759
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain","termid":"PBO:0111759"}


id: PATO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000089 relative disease sensitivity (obsolete PATO:0000089)","termid":"PATO:0000089"}


id: PBO:0085048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p","termid":"PBO:0085048"}


id: PBO:0089539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion transmembrane transporter","termid":"PBO:0089539"}


id: PBO:0058167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4462","termid":"PBO:0058167"}


id: GO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a heavy metal, a metal that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:mah","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal binding (obsolete GO:0005505)","synonyms":[{"name":"heavy metal binding","type":"exact"}],"termid":"GO:0005505"}


id: GO:0002540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any leukotriene following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid metabolite production involved in inflammatory response","termid":"GO:0002538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukotriene production involved in inflammatory response","synonyms":[{"name":"leukotriene production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002540"}


id: MOD:00123
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-carboxy-L-lysine.","definition_xrefs":["PubMed:7754395","PubMed:11369851","PubMed:637859","RESID:AA0114","PubMed:4436319","Unimod:299#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carboxy-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(carboxyamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-carbamic hexanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"MOD_RES N6-carboxylysine","type":"exact"},{"name":"N6-carbamyllysine","type":"related"},{"name":"N6-carboxy-L-lysine","type":"exact"},{"name":"N6-carboxylysine","type":"exact"},{"name":"N6CbxLys","type":"exact"},{"name":"lysine NZ-carboxylic acid","type":"exact"}],"termid":"MOD:00123"}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: FYPO:0004914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit differs from normal.","definition_xrefs":["PMID:18157152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomeric repeat sequence","termid":"FYPO:0004914"}


id: GO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by p53 class mediator","termid":"GO:1901798"},{"relation_name":"positively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"positive regulation of p53 induced by DNA damage response","type":"exact"},{"name":"stimulation of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"}],"termid":"GO:0043517"}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: PBO:0085571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein implicated in the regulation of ergosterol biosynthesis; one of a seven member gene family with a common essential function and non-essential unique functions; similar to human oxysterol binding protein (OSBP); SWAT-GFP and mCherry fusion proteins localize to the bud neck and vacuolar membrane; HES1 has a paralog, KES1, that arose from the whole genome duplication","termid":"PBO:0085571"}


id: PBO:0042815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 4","termid":"PBO:0042815"}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: PBO:0111064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2, human GCFC2 ortholog","termid":"PBO:0111064"}


id: PBO:0039280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 9, pseudogene","termid":"PBO:0039280"}


id: PBO:0050214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 31","termid":"PBO:0050214"}


id: PBO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Grt1 (predicted)","termid":"PBO:0003028"}


id: PBO:0073902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC14A2 antisense RNA 1","termid":"PBO:0073902"}


id: PBO:0081171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 1","termid":"PBO:0081171"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PBO:0086983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of trehalose-6-phosphate synthase/phosphatase; involved in synthesis of storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway; TPS3 has a paralog, TSL1, that arose from the whole genome duplication","termid":"PBO:0086983"}


id: PBO:0050280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMMR antisense RNA 1","termid":"PBO:0050280"}


id: PBO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6 pseudogene 1","termid":"PBO:0047467"}


id: GO:0044615
data:
  {"annotated_genes":["SJAG_02274","SJAG_04645","SJAG_05243","SJAG_03593","SJAG_01584","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85141,87819,91076,110939,111588,112464],"is_not":false,"summary":null,"term":"GO:0044615"}]},"cv_name":"cellular_component","definition":"A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.","definition_xrefs":["PMID:18046406","PMID:19524430","PMID:20947011","PMID:22419078","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02274":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005643","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear pore nuclear basket","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044615","terms_by_termid":{"GO:0044615":null}}


id: PBO:0031272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased_during_vegetative_growth","termid":"PBO:0031272"}


id: GO:0106428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106428"}


id: GO:0033608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formyl-CoA + oxalate = formate + oxalyl-CoA.","definition_xrefs":["RHEA:16545","EC:2.8.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"formyl-CoA transferase activity","secondary_identifiers":["MetaCyc:RXN0-1382","KEGG_REACTION:R07290"],"synonyms":[{"name":"formyl-CoA oxalate CoA-transferase activity","type":"related"},{"name":"formyl-CoA:oxalate CoA-transferase activity","type":"related"},{"name":"formyl-coenzyme A transferase activity","type":"related"}],"termid":"GO:0033608"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: GO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mannoprotein catabolic process","synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058"}


id: MOD:00645
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acetylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-acetylated residue","synonyms":[{"name":"SAcRes","type":"exact"}],"termid":"MOD:00645"}


id: GO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"cellular modified histidine catabolic process","termid":"GO:0052702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ergothioneine catabolic process","synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine breakdown","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine degradation","type":"exact"},{"name":"ergothioneine breakdown","type":"exact"},{"name":"ergothioneine catabolism","type":"exact"},{"name":"ergothioneine degradation","type":"exact"}],"termid":"GO:0052700"}


id: PBO:0057187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 345","termid":"PBO:0057187"}


id: SO:0000903
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous DNA sequence that are likely to have arisen from retroviruses.","direct_ancestors":[{"relation_name":"is_a","term_name":"proviral_location","termid":"SO:0000751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous_retroviral_sequence","synonyms":[{"name":"endogenous retroviral sequence","type":"exact"}],"termid":"SO:0000903"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: PBO:0083661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized protein; involved in ER-associated protein degradation (ERAD), ER stress, and homeostasis; interacts with components of ERAD-L and ERAD-C and Cdc48p; derlin-like family member similar to Der1p","termid":"PBO:0083661"}


id: GO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006281","GO:0140013","GO:0006310","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in reciprocal meiotic recombination","termid":"GO:0010778"}


id: PBO:0065819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5A, member RAS oncogene family","termid":"PBO:0065819"}


id: GO:0097225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.","definition_xrefs":["MP:0009831","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm midpiece","termid":"GO:0097225"}


id: GO:0060862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of floral organ abscission","termid":"GO:0060860"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of floral organ abscission","termid":"GO:0060862"}


id: PBO:0017037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR93","termid":"PBO:0017037"}


id: SO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002057 intronic_splicing_enhancer (obsolete SO:0002057)","synonyms":[{"name":"ISE","type":"exact"}],"termid":"SO:0002057"}


id: GO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the excited state of a photoreceptor cell to produce a steady-state current as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential in photoreceptor cell","termid":"GO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of membrane potential in photoreceptor cell by rhodopsin mediated signaling","synonyms":[{"name":"maintenance of rhodopsin mediated signaling","type":"related"},{"name":"maintenance of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016058"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: PBO:0078682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 15-1","termid":"PBO:0078682"}


id: SO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 16S rRNA is an RNA component of the small subunit of cytosolic ribosomes in prokaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_16S_gene","termid":"SO:0002237"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_16S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/16S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 16S SSU RNA","type":"exact"},{"name":"cytosolic 16S rRNA","type":"related"},{"name":"cytosolic 16S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 16S","type":"exact"}],"termid":"SO:0001000"}


id: FYPO:0005013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 8 of histone H4 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4 acetylation during vegetative growth","termid":"FYPO:0005011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H4-K8 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H4-K8 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H4K8 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H4-K8 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005013"}


id: PBO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nob1 (predicted)","termid":"PBO:0001932"}


id: PBO:0039538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36B pseudogene 2","termid":"PBO:0039538"}


id: PBO:0074224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 3","termid":"PBO:0074224"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: PBO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 23 subunit alpha","termid":"PBO:0051599"}


id: GO:0097307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to farnesol","termid":"GO:0097307"}


id: PBO:0065216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 pseudogene 2","termid":"PBO:0065216"}


id: PBO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2A antisense RNA 1","termid":"PBO:0061716"}


id: PBO:0060957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor delta","termid":"PBO:0060957"}


id: GO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein amino acid glycosylation process in which a sugar unit is added to a free alpha-amino or alpha-carboxyl terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal glycosylation (obsolete GO:0006494)","synonyms":[{"name":"protein amino acid terminal glycosylation","type":"exact"}],"termid":"GO:0006494"}


id: GO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vasopressin-like receptor activity (obsolete GO:0001603)","synonyms":[{"name":"vasopressin-like receptor activity","type":"exact"}],"termid":"GO:0001603"}


id: PBO:0070695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 4","termid":"PBO:0070695"}


id: GO:0019347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-alpha-D-mannosylchitobiosyldiphosphodolichol, a substance composed of mannosylchitobiosyldiphosphodolichol in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"nucleobase-containing compound biosynthetic process","termid":"GO:0034654"},{"relation_name":"is_a","term_name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolic process","termid":"GO:0046376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process","secondary_identifiers":["MetaCyc:MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS"],"synonyms":[{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol anabolism","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthesis","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol formation","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol synthesis","type":"exact"}],"termid":"GO:0019347"}


id: PBO:0027079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane","termid":"PBO:0027079"}


id: GO:1901956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.","definition_xrefs":["PMID:23358451","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"regulation of retrograde dense core granule transport","termid":"GO:1901954"},{"relation_name":"is_a","term_name":"positive regulation of dense core granule transport","termid":"GO:1904811"},{"relation_name":"is_a","term_name":"positive regulation of retrograde axon cargo transport","termid":"GO:2001019"},{"relation_name":"positively_regulates","term_name":"retrograde neuronal dense core vesicle transport","termid":"GO:1990049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde dense core granule transport","synonyms":[{"name":"activation of retrograde dense core granule transport","type":"narrow"},{"name":"up regulation of retrograde dense core granule transport","type":"exact"},{"name":"up-regulation of retrograde dense core granule transport","type":"exact"},{"name":"upregulation of retrograde dense core granule transport","type":"exact"}],"termid":"GO:1901956"}


id: GO:0016170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-15 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-15 receptor binding","synonyms":[{"name":"IL-15","type":"narrow"},{"name":"interleukin-15 receptor ligand","type":"narrow"}],"termid":"GO:0016170"}


id: PBO:0078452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5","termid":"PBO:0078452"}


id: GO:0099634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"},{"relation_name":"part_of","term_name":"postsynaptic specialization","termid":"GO:0099572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane","termid":"GO:0099634"}


id: GO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TDP, ribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"TDP metabolic process","synonyms":[{"name":"TDP metabolism","type":"exact"}],"termid":"GO:0046043"}


id: SO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a transcription factor binding site.","definition_xrefs":["EBI:fc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_variant","termid":"SO:0001566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TF_binding_site_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:tf_binding_site_variant","type":"exact"},{"name":"TF binding site variant","type":"exact"},{"name":"VEP:TF_binding_site_variant","type":"exact"}],"termid":"SO:0001782"}


id: PBO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 2","termid":"PBO:0051840"}


id: SO:1000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome carrying the two right (D = dextro) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrosynaptic_chromosome","synonyms":[{"name":"dextrosynaptic chromosome","type":"exact"}],"termid":"SO:1000142"}


id: GO:0030943
data:
  {"annotated_genes":["SJAG_04996","SJAG_03358","SJAG_01640"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95513,95624,103360],"is_not":false,"summary":null,"term":"GO:0030943"}]},"cv_name":"molecular_function","definition":"Binding to a mitochondrion targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01640":null,"SJAG_03358":null,"SJAG_04996":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005048","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrion targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial targeting sequence binding","type":"exact"}],"termid":"GO:0030943","terms_by_termid":{"GO:0030943":null}}


id: PBO:0063284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 10","termid":"PBO:0063284"}


id: GO:0098791
data:
  {"annotated_genes":["SJAG_01276","SJAG_02177","SJAG_00296","SJAG_01409","SJAG_02912","SJAG_04095","SJAG_05209","SJAG_04739","SJAG_02525","SJAG_04819","SJAG_01516","SJAG_05330","SJAG_03555","SJAG_04358","SJAG_04112","SJAG_03663","SJAG_01488","SJAG_03953","SJAG_00816","SJAG_03756","SJAG_03278","SJAG_02168","SJAG_03634","SJAG_02240","SJAG_03670","SJAG_02902","SJAG_01633","SJAG_04398","SJAG_00567","SJAG_00669","SJAG_01025","SJAG_00330","SJAG_01571","SJAG_04338","SJAG_03347","SJAG_01945","SJAG_04770","SJAG_01448","SJAG_04548"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92153,113003],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[94799],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031985"},{"annotations":[86459,97232,94193,109123],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[92511,87277,91657,106909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005795"},{"annotations":[86460,109124,97233,92154,95587],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[108754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[83660,101002,114057,93984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[95836,114505,98737,97638,95552,84814,95133,95591,94801,100459,99453,89274,95983,100140,108550,113642,96264,88385,92796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005802"},{"annotations":[86859,91836,89312,103432,87325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"A compartment that consists of a lumen and an enclosing membrane, and is part of the Golgi apparatus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00330":null,"SJAG_00567":null,"SJAG_00669":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01633":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02902":null,"SJAG_02912":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04548":null,"SJAG_04739":null,"SJAG_04770":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"Golgi apparatus subcompartment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi subcompartment","type":"exact"}],"termid":"GO:0098791","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0005802":null,"GO:0031985":null,"GO:0032588":null,"GO:0140497":null}}


id: GO:0035235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to a glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ionotropic glutamate receptor signaling pathway","synonyms":[{"name":"ionotropic glutamate receptor signalling pathway","type":"exact"}],"termid":"GO:0035235"}


id: PBO:0062332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 71 pseudogene","termid":"PBO:0062332"}


id: PBO:0085982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085982"}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: PBO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one ot one)","termid":"PBO:0001788"}


id: FYPO:0003877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes one round of cell division, instead of the normal two rounds, prior to entering quiescence (G0).","definition_xrefs":["PomBase:al","PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G1 to G0 transition","termid":"FYPO:0000427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"single cell division prior to G0 entry","synonyms":[{"name":"G0 to G1 transition after single cell division","type":"exact"},{"name":"one cell division prior to G0 entry","type":"exact"},{"name":"single cell division prior to cell quiescence entry","type":"exact"},{"name":"single cell division prior to quiescence entry","type":"exact"}],"termid":"FYPO:0003877"}


id: GO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"protein localization to membrane raft","termid":"GO:1903044"},{"relation_name":"part_of","term_name":"membrane raft organization","termid":"GO:0031579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein insertion into membrane raft","synonyms":[{"name":"establishment of protein localization to membrane raft","type":"broad"}],"termid":"GO:0071210"}


id: PBO:0073744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3","termid":"PBO:0073744"}


id: PBO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A11","termid":"PBO:0072750"}


id: PBO:0005294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACN9 family protein","termid":"PBO:0005294"}


id: PBO:0038949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenin","termid":"PBO:0038949"}


id: PBO:0056671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 29","termid":"PBO:0056671"}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tetrachlorobenzene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034935"}


id: FYPO:0002212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube that is curved along the long axis, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable curved elongated vegetative cell","termid":"FYPO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, curved germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, curved cell","type":"exact"},{"name":"inviable following spore germination with elongated, curved germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, curved germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, curved germ tube","type":"exact"}],"termid":"FYPO:0002212"}


id: GO:2000372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of DNA topoisomerase (ATP-hydrolyzing) activity","termid":"GO:2000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"negative regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"negative regulation of DNA topoisomerase II","type":"related"},{"name":"negative regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"negative regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"negative regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"negative regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"negative regulation of topoisomerase","type":"related"},{"name":"negative regulation of topoisomerase II","type":"exact"},{"name":"negative regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000372"}


id: PBO:0072638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retbindin","termid":"PBO:0072638"}


id: PBO:0078792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 15-1","termid":"PBO:0078792"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:30279482","PMID:28497810","PMID:34608293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: GO:1990442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:23985028","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrosative stress","termid":"GO:0071500"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","synonyms":[{"name":"nitrosative stress-induced apoptosis","type":"related"},{"name":"nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:1990442"}


id: GO:0099507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ligand-gated ion channel activity, occurring in the presynaptic membrane, that is involved in regulation of presynaptic membrane potential.","definition_xrefs":["PMID:15145529","PMID:19558451","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"ligand gated ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"ligand-dependent ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ligand-dependent ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"ligand-gated ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ligand-gated ion channel activity involved in regulation of presynaptic membrane potential","type":"broad"}],"termid":"GO:0099507"}


id: GO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host phagocytosis (obsolete GO:0052190)","termid":"GO:0052190"}


id: PBO:0074144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B4","termid":"PBO:0074144"}


id: GO:1901673
data:
  {"annotated_genes":["SJAG_04464","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107076],"is_not":false,"summary":null,"term":"GO:1901673"},{"annotations":[107491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"is_a","term_name":"regulation of spindle assembly","termid":"GO:0090169"},{"relation_name":"regulates","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:1901673","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: PATO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in light by virtue of the bearer's scattering occurring at small angle to the incident beam.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward scatter","termid":"PATO:0002032"}


id: PBO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nibrin","termid":"PBO:0060564"}


id: GO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichol-phosphate + UDP-D-xylose = dolichyl D-xylosyl phosphate + UDP.","definition_xrefs":["EC:2.4.2.32","MetaCyc:2.4.2.32-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate D-xylosyltransferase activity","secondary_identifiers":["RHEA:15361"],"synonyms":[{"name":"UDP-D-xylose:dolichyl-phosphate D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047283"}


id: PBO:0087338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of specific cargo proteins at the multivesicular body; mRNA is targeted to the bud via the mRNA transport system involving She2p","termid":"PBO:0087338"}


id: PR:O60079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp12 gene.","definition_xrefs":["UniProtKB:O60079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.05c","synonyms":[{"name":"Spom972h-ubp12","type":"exact"},{"name":"deubiquitinating enzyme 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60079"}


id: PBO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase (predicted)","termid":"PBO:0002061"}


id: PBO:0058101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4316","termid":"PBO:0058101"}


id: GO:0044387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping, prevention, or reduction in frequency, rate or extent of protein kinase activity as a result of regulating the phosphorylation status of that protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity by regulation of protein phosphorylation","termid":"GO:0044387"}


id: FYPO:0000566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular respiration is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular respiration","synonyms":[{"name":"normal cellular respiration during mitotic cell cycle","type":"related"},{"name":"normal cellular respiration during vegetative growth","type":"exact"},{"name":"normal respiration","type":"broad"},{"name":"normal respiratory metabolism","type":"exact"},{"name":"respiratory metabolism: normal","type":"related"}],"termid":"FYPO:0000566"}


id: GO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-isoleucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-isoleucine modification","termid":"GO:0018203"}


id: PBO:0051573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17B","termid":"PBO:0051573"}


id: PBO:0038445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aralkylamine N-acetyltransferase","termid":"PBO:0038445"}


id: FYPO:0002639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is greater than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:22065639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"increased distance between mitotic kinetochores","type":"related"},{"name":"increased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"increased interkinetochore distance before anaphase onset","type":"exact"},{"name":"increased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"increased sister kinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0002639"}


id: GO:0102243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-geranylgeraniol + ATP = H+ + all-trans-geranyl-geranyl monophosphate + ADP.","definition_xrefs":["RHEA:61660","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geranylgeraniol kinase activity","termid":"GO:0052671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ATP:geranylgeraniol phosphotransferase activity","secondary_identifiers":["MetaCyc:RXN-12325","EC:2.7.1.216"],"termid":"GO:0102243"}


id: GO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine and threonine metabolic process (obsolete GO:0018927)","synonyms":[{"name":"methionine and threonine metabolic process","type":"exact"}],"termid":"GO:0018927"}


id: GO:0030266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + NAD+ = (-)-3-dehydroquinate + NADH + H+.","definition_xrefs":["EC:1.1.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinate 3-dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.282","MetaCyc:QUINATE-5-DEHYDROGENASE-RXN","RHEA:22364","KEGG_REACTION:R01872"],"synonyms":[{"name":"quinate:NAD 3-oxidoreductase activity","type":"exact"},{"name":"quinate:NAD 5-oxidoreductase activity","type":"related"},{"name":"quinate:NAD(+) 3-oxidoreductase activity","type":"exact"},{"name":"quinate:NAD(+) 5-oxidoreductase activity","type":"related"},{"name":"quinic dehydrogenase activity","type":"broad"}],"termid":"GO:0030266"}


id: PBO:0087551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP; RNase MRP processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P","termid":"PBO:0087551"}


id: GO:0004515
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96144],"is_not":false,"summary":null,"term":"GO:0004515"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nicotinate ribonucleotide = diphosphate + deamido-NAD+.","definition_xrefs":["EC:2.7.7.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"nicotinate-nucleotide adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-197235","Reactome:R-HSA-200512","Reactome:R-HSA-200474","RHEA:22860","MetaCyc:NICONUCADENYLYLTRAN-RXN"],"synonyms":[{"name":"ATP:nicotinate-nucleotide adenylyltransferase activity","type":"exact"},{"name":"ATP:nicotinate-ribonucleotide adenylyltransferase activity","type":"related"},{"name":"NaMN-ATase activity","type":"related"},{"name":"deamido-NAD(+) diphosphorylase activity","type":"related"},{"name":"deamido-NAD(+) pyrophosphorylase activity","type":"related"},{"name":"deamido-NAD+ pyrophosphorylase activity","type":"related"},{"name":"deamidonicotinamide adenine dinucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinate mononucleotide adenylyltransferase activity","type":"related"},{"name":"nicotinic acid mononucleotide adenylyltransferase","type":"narrow"}],"termid":"GO:0004515","terms_by_termid":{"GO:0004515":null}}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: GO:1901031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to oxidative stress","termid":"GO:1902882"},{"relation_name":"regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to reactive oxygen species","synonyms":[{"name":"regulation of response to AOS","type":"exact"},{"name":"regulation of response to ROI","type":"exact"},{"name":"regulation of response to ROS","type":"exact"},{"name":"regulation of response to active oxygen species","type":"exact"},{"name":"regulation of response to reactive oxidative species","type":"exact"},{"name":"regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901031"}


id: GO:0010783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the proboscis that are derived from the eye-antennal disc are generated and organized.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"eye-antennal disc morphogenesis","termid":"GO:0007455"},{"relation_name":"part_of","term_name":"proboscis morphogenesis","termid":"GO:0048734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis morphogenesis, eye-antennal disc-derived","termid":"GO:0010783"}


id: GO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: branched-chain dodecylbenzene sulfonate + 1/2 O2 + H+ = sulfurous acid + branched-chain dodecyl-4-hydroxy-benzene + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"branched-chain dodecylbenzene sulfonate monooxygenase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0034802"}


id: PBO:0034252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_preceded_by","termid":"PBO:0034252"}


id: PBO:0069619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 896, pseudogene","termid":"PBO:0069619"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: PBO:0029039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level","termid":"PBO:0029039"}


id: GO:2000736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell differentiation","termid":"GO:2000736"}


id: PBO:0073394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 9","termid":"PBO:0073394"}


id: FYPO:0002274
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115150,115142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115141,115145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115606],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is abnormal. A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02592":null,"SJAG_02763":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":7,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein metabolic process","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_02592","SJAG_04697","SJAG_01787","SJAG_03940","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gms1delta","nem2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck1delta","pck2delta","sty1delta"],"synonyms":[{"name":"abnormal cellular protein metabolic process","type":"exact"},{"name":"abnormal protein metabolism","type":"exact"}],"termid":"FYPO:0002274","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0086110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene","termid":"PBO:0086110"}


id: GO:0032396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:11858820","GOC:add","PMID:9597134","PMID:9368779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}


id: PBO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFTPH divergent transcript","termid":"PBO:0039020"}


id: PBO:0063724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 2","termid":"PBO:0063724"}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: PBO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-iduronidase","termid":"PBO:0050888"}


id: PBO:0073950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 3","termid":"PBO:0073950"}


id: PBO:0042559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 1","termid":"PBO:0042559"}


id: GO:0048613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, by which the anatomical structures of the ectodermal digestive tract are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic digestive tract morphogenesis","termid":"GO:0048557"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"},{"relation_name":"part_of","term_name":"embryonic ectodermal digestive tract development","termid":"GO:0048611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic ectodermal digestive tract morphogenesis","synonyms":[{"name":"embryonic ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048613"}


id: GO:0140756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the proteasome.","definition_xrefs":["PMID:29652515","PMID:10500111","PMID:28525752","PMID:28583440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of proteasome","termid":"GO:0140756"}


id: PR:O14236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar GTP-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.03c","secondary_identifiers":["UniProtKB:O14236"],"synonyms":[{"name":"SPAC6F6.03c","type":"related"},{"name":"Spom972h-GNL2","type":"exact"}],"termid":"PR:O14236"}


id: PBO:0054629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2034","termid":"PBO:0054629"}


id: PBO:0041313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 68","termid":"PBO:0041313"}


id: PBO:0080176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 11","termid":"PBO:0080176"}


id: PBO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036226"}


id: GO:0180019
data:
  {"annotated_genes":["SJAG_03327","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97403,109842],"is_not":false,"summary":null,"term":"GO:0180019"}]},"cv_name":"cellular_component","definition":"A kinetochore subcomplex that binds to centromeric chromatin and forms part of the outer kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans and yeast respectively, it consists of KNL1/Spc105p and ZWINT/Kre28p.","definition_xrefs":["PMID:27881301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0000776","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"Knl1/Spc105 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180019","terms_by_termid":{"GO:0180019":null}}


id: PBO:0063578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PERP pseudogene 1","termid":"PBO:0063578"}


id: GO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045673"],"synonyms":[{"name":"regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046532"}


id: PBO:0044244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 1","termid":"PBO:0044244"}


id: PR:O13955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vam6/Vps39-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar morphogenesis protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.14","secondary_identifiers":["UniProtKB:O13955"],"synonyms":[{"name":"Spom972h-VPS39","type":"exact"},{"name":"vacuolar protein sorting-associated protein 39 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13955"}


id: GO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of MAP kinase activity.","definition_xrefs":["GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAP kinase activity","termid":"GO:0043405"},{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MAP kinase activity","synonyms":[{"name":"down regulation of MAPK activity","type":"exact"},{"name":"down-regulation of MAPK activity","type":"exact"},{"name":"downregulation of MAPK activity","type":"exact"},{"name":"inhibition of MAPK activity","type":"narrow"},{"name":"negative regulation of mitogen activated protein kinase activity","type":"exact"},{"name":"negative regulation of mitogen-activated protein kinase activity","type":"exact"}],"termid":"GO:0043407"}


id: PBO:0041810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium regulated heat stable protein 1","termid":"PBO:0041810"}


id: GO:0015867
data:
  {"annotated_genes":["SJAG_00612","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106956],"is_not":false,"summary":null,"term":"GO:0015867"},{"annotations":[106958,98935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of ATP, adenosine triphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ATP transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015867","terms_by_termid":{"GO:0015867":null,"GO:1990544":null}}


id: GO:0032548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine deoxyribonucleoside, a compound consisting of a pyrimidine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside binding","termid":"GO:0001884"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside binding","termid":"GO:0032548"}


id: PATO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a bearer by virtue of what the bearer receives as a result of being exposed to ionizing radiation.","definition_xrefs":["hps:hps"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation exposure","termid":"PATO:0001744"}


id: GO:0036257
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90022],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["PMID:11566881","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multivesicular body organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MVB organization","type":"exact"}],"termid":"GO:0036257","terms_by_termid":{"GO:0034496":null}}


id: GO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methotrexate stimulus. Methotrexate is 4-amino-10-methylformic acid, a folic acid analogue that is a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methotrexate","termid":"GO:0031427"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methotrexate","termid":"GO:0071414"}


id: PBO:0028932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_division_site","termid":"PBO:0028932"}


id: PBO:0072324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 10","termid":"PBO:0072324"}


id: GO:0017050
data:
  {"annotated_genes":["SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93763],"is_not":false,"summary":null,"term":"GO:0017050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP.","definition_xrefs":["MetaCyc:RXN3DJ-11417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02429":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"D-erythro-sphingosine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9625814","EC:2.7.1.91","RHEA:35847","Reactome:R-HSA-5218845"],"synonyms":[{"name":"sphingosine kinase activity","type":"exact"}],"termid":"GO:0017050","terms_by_termid":{"GO:0017050":null}}


id: PBO:0082563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone for Replication Protein A complex (RPA); involved in nuclear import of RPA and its binding to ssDNA at replication forks; has a role in regulation of Ty1 transposition","termid":"PBO:0082563"}


id: PBO:0017704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4 nonhomologous end joining factor Xrc4","termid":"PBO:0017704"}


id: PBO:0075422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 8","termid":"PBO:0075422"}


id: GO:0098837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome of the postsynapse. In postsynaptic terminals with dendritic spines, it is typically located at the base of a dendritic spine. It is involved in recycling of neurotransmitter receptors to the postsynaptic membrane. In some cases at least, this recycling is activated by postsynaptic signaling and so can play a role in long term potentiation.","definition_xrefs":["PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"postsynaptic recycling endosome","synonyms":[{"name":"postsynaptic endosomal recycling compartment","type":"broad"},{"name":"postsynaptic recycling outpost","type":"exact"}],"termid":"GO:0098837"}


id: GO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:14675537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polyubiquitinated protein transport","synonyms":[{"name":"polyubiquitylated protein transport","type":"exact"}],"termid":"GO:0070844"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: PBO:0068729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 18, pseudogene","termid":"PBO:0068729"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: PBO:0084859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for respiration and for maintenance of the mitochondrial genome","termid":"PBO:0084859"}


id: PBO:0079736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 2A","termid":"PBO:0079736"}


id: PBO:0048972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2 pseudogene 1","termid":"PBO:0048972"}


id: RO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l ","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_localization_to","termid":"RO:0002337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_transport_along","termid":"RO:0002341"}


id: FYPO:0009103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the recoil distance of the cytokynetic ring after ring ablation is increased with respect to wild type. Experimentally, a localised cut or ablation is typically achieved using a laser. This distance, in combination with the timing of recoil are used to compute effective stiffness and drag of the ring components. See PMID:36980258.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"increased actomyosin contractile ring recoil distance after ring ablation","secondary_identifiers":["PMID:36980258"],"synonyms":[{"name":"increased cytokinetic ring recoil distance after laser ablation","type":"broad"}],"termid":"FYPO:0009103"}


id: GO:0047228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + UDP-alpha-D-glucose = a 1,2-diacyl-3-O-(alpha-D-glucopyranosyl)-sn-glycerol + H+ + UDP.","definition_xrefs":["RHEA:47612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"1,2-diacylglycerol 3-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.157-RXN","EC:2.4.1.337"],"synonyms":[{"name":"UDP-glucose-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:1,2-diacylglycerol glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,2-diacylglycerol 3-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:diacylglycerol glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-diacylglycerol glucosyltransferase activity","type":"related"}],"termid":"GO:0047228"}


id: GO:0071269
data:
  {"annotated_genes":["SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106570],"is_not":false,"summary":null,"term":"GO:0071269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homocysteine, the L-enantiomer of 2-amino-4-sulfanylbutanoic acid.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"},{"relation_name":"is_a","term_name":"homocysteine biosynthetic process","termid":"GO:0071268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-homocysteine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-homocysteine anabolism","type":"exact"},{"name":"L-homocysteine biosynthesis","type":"exact"},{"name":"L-homocysteine formation","type":"exact"},{"name":"L-homocysteine synthesis","type":"exact"}],"termid":"GO:0071269","terms_by_termid":{"GO:0071269":null}}


id: GO:1905169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to phagocytic vesicle","termid":"GO:1905161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to phagocytic vesicle","synonyms":[{"name":"regulation of protein localisation in phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagocytic vesicle","type":"exact"},{"name":"regulation of protein localisation to phagosome","type":"exact"},{"name":"regulation of protein localization in phagocytic vesicle","type":"exact"},{"name":"regulation of protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905169"}


id: PR:000028932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpx1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin tpx1","synonyms":[{"name":"Peroxiredoxin tsa1","type":"exact"},{"name":"TPX1","type":"related"},{"name":"TSA1","type":"related"},{"name":"Thioredoxin peroxidase","type":"exact"},{"name":"tpx1","type":"exact"}],"termid":"PR:000028932"}


id: PBO:0062320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 2","termid":"PBO:0062320"}


id: GO:1902594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A nuclear import which involves another organism.","definition_xrefs":["GOC:TermGenie","GOC:jl","GO_REF:0000089"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism nuclear import (obsolete GO:1902594)","synonyms":[{"name":"multi organism nuclear import","type":"exact"}],"termid":"GO:1902594"}


id: MOD:00360
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide.","definition_xrefs":["RESID:AA0355","PubMed:12475995","Unimod:444#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinuncleotide","synonyms":[{"name":"CuSMo","type":"related"},{"name":"L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","type":"exact"},{"name":"[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with cytosine)methyl-6-oxo-3,4-dimercapto-pteridino[6,7-5,6]pyranoato-S3,S4]-cysteinyl-S-copper-mu-sulfido-molybdenum hydroxide oxide","type":"exact"},{"name":"copper sulfido molybdopterin cytosine dinuncleotide","type":"related"},{"name":"cysteinyl copper mu-sulfido Mo-pterin cytosine dinucleotide","type":"exact"}],"termid":"MOD:00360"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: PBO:0087379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding protein; has a probable role in retrograde transport of sterols from the plasma membrane to the ER; contains two StART-like domains that bind sterols and a GRAM domain; co-localizes to puncta in the cortical ER with Sip3p; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes","termid":"PBO:0087379"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: _global:acts_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_positive_effect","termid":"_global:acts_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_positive_effect","secondary_identifiers":["RO:0004034"],"termid":"_global:acts_upstream_of,_positive_effect"}


id: PBO:0062038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 7","termid":"PBO:0062038"}


id: PBO:0057226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR381 host gene","termid":"PBO:0057226"}


id: PBO:0049996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 2","termid":"PBO:0049996"}


id: GO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyrosine + O2 + NADPH + H+ = N-hydroxytyrosine + NADP+ + H2O.","definition_xrefs":["MetaCyc:TYROSINE-N-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tyrosine N-monooxygenase activity","secondary_identifiers":["RHEA:22464"],"synonyms":[{"name":"CYP79A1 activity","type":"narrow"},{"name":"L-tyrosine,NADPH:oxygen oxidoreductase (N-hydroxylating)","type":"exact"},{"name":"tyrosine N-hydroxylase activity","type":"exact"}],"termid":"GO:0050370"}


id: PBO:0042385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300a molecule","termid":"PBO:0042385"}


id: GO:0034136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 2 signaling pathway","termid":"GO:0034135"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"negative regulation of TLR2 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034136"}


id: GO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"retinoic acid binding","termid":"GO:0001972"}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: GO:0045702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spermatid nuclear differentiation","synonyms":[{"name":"activation of spermatid nuclear differentiation","type":"narrow"},{"name":"stimulation of spermatid nuclear differentiation","type":"narrow"},{"name":"up regulation of spermatid nuclear differentiation","type":"exact"},{"name":"up-regulation of spermatid nuclear differentiation","type":"exact"},{"name":"upregulation of spermatid nuclear differentiation","type":"exact"}],"termid":"GO:0045702"}


id: GO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of the Arg-Ile bond in factor X to form factor Xa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor IXa activity (obsolete GO:0003803)","synonyms":[{"name":"Christmas factor activity","type":"related"},{"name":"activated blood coagulation factor XI","type":"related"},{"name":"activated blood-coagulation factor IX","type":"related"},{"name":"activated christmas factor","type":"related"},{"name":"autoprothrombin II","type":"related"},{"name":"blood coagulation factor IX activity","type":"exact"},{"name":"blood platelet cofactor II","type":"related"},{"name":"blood-coagulation factor IXa","type":"related"},{"name":"coagulation factor IXa activity","type":"exact"}],"termid":"GO:0003803"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","Unimod:188#I","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: GO:0010153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell expansion that results in an increase in cell size along the axis of an organ in a polarized fashion.","definition_xrefs":["PMID:11978864"],"gene_count":0,"genotype_count":0,"name":"obsolete polar cell elongation (obsolete GO:0010153)","synonyms":[{"name":"polar cell elongation","type":"exact"},{"name":"polarity-dependent cell elongation","type":"narrow"}],"termid":"GO:0010153"}


id: GO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transdifferentiation","secondary_identifiers":["Wikipedia:Transdifferentiation"],"termid":"GO:0060290"}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: PBO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase vitellogenic like","termid":"PBO:0043842"}


id: PBO:0054039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1375","termid":"PBO:0054039"}


id: PBO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2B","termid":"PBO:0045695"}


id: PBO:0084408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lyso-phosphatidylcholine acyltransferase; required for normal phospholipid content of mitochondrial membranes; major determinant of the final acyl chain composition of the mitochondrial-specific phospholipid cardiolipin; mutations in human ortholog tafazzin (TAZ) cause Barth syndrome, a rare X-linked disease characterized by skeletal and cardiomyopathy and bouts of cyclic neutropenia; a specific splice variant of human TAZ can complement yeast null mutant","termid":"PBO:0084408"}


id: GO:0072181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric duct. A mesonephric duct is a tube that drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"is_a","term_name":"nephric duct formation","termid":"GO:0072179"},{"relation_name":"is_a","term_name":"mesonephric duct morphogenesis","termid":"GO:0072180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct formation","synonyms":[{"name":"Wolffian duct formation","type":"exact"}],"termid":"GO:0072181"}


id: GO:1902312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:21489137","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of copper ion transmembrane transport","synonyms":[{"name":"down regulation of copper cation transmembrane transport","type":"exact"},{"name":"down regulation of copper ion membrane transport","type":"exact"},{"name":"down regulation of copper ion transmembrane transport","type":"exact"},{"name":"down-regulation of copper cation transmembrane transport","type":"exact"},{"name":"down-regulation of copper ion membrane transport","type":"exact"},{"name":"down-regulation of copper ion transmembrane transport","type":"exact"},{"name":"downregulation of copper cation transmembrane transport","type":"exact"},{"name":"downregulation of copper ion membrane transport","type":"exact"},{"name":"downregulation of copper ion transmembrane transport","type":"exact"},{"name":"inhibition of copper cation transmembrane transport","type":"narrow"},{"name":"inhibition of copper ion membrane transport","type":"narrow"},{"name":"inhibition of copper ion transmembrane transport","type":"narrow"},{"name":"negative regulation of copper cation transmembrane transport","type":"exact"},{"name":"negative regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902312"}


id: PBO:0075761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 3","termid":"PBO:0075761"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PBO:0044943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrodiol dehydrogenase","termid":"PBO:0044943"}


id: PBO:0058238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4526","termid":"PBO:0058238"}


id: GO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell during an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"alpha-beta T cell development involved in immune response","type":"related"},{"name":"alpha-beta T cell differentiation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002293"}


id: GO:0008478
data:
  {"annotated_genes":["SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95770,111740],"is_not":false,"summary":null,"term":"GO:0008478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate.","definition_xrefs":["EC:2.7.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pyridoxal kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10224","Reactome:R-HSA-964970","MetaCyc:PYRIDOXKIN-RXN","Reactome:R-HSA-964958","Reactome:R-HSA-964962"],"synonyms":[{"name":"ATP:pyridoxal 5'-phosphotransferase activity","type":"related"},{"name":"pyridoxal 5-phosphate-kinase activity","type":"related"},{"name":"pyridoxal kinase (phosphorylating)","type":"related"},{"name":"pyridoxal phosphokinase activity","type":"related"},{"name":"pyridoxamine kinase activity","type":"related"},{"name":"pyridoxine kinase activity","type":"related"},{"name":"vitamin B(6) kinase activity","type":"related"},{"name":"vitamin B6 kinase activity","type":"related"}],"termid":"GO:0008478","terms_by_termid":{"GO:0008478":null}}


id: PBO:0060365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYOM3 antisense RNA 1","termid":"PBO:0060365"}


id: PBO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD27 antisense RNA 1","termid":"PBO:0042313"}


id: PBO:0052020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junction mediating and regulatory protein, p53 cofactor","termid":"PBO:0052020"}


id: PBO:0070394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORA antisense RNA 1","termid":"PBO:0070394"}


id: PBO:0091216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family Ftm1, partial, adjacent to genomic sequence gap","termid":"PBO:0091216"}


id: GO:0015948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"},{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"alkane biosynthetic process","termid":"GO:0043447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methanogenesis","secondary_identifiers":["UM-BBD_pathwayID:meth","Wikipedia:Methanogenesis"],"synonyms":[{"name":"methane biosynthesis","type":"exact"},{"name":"methane biosynthetic process","type":"exact"}],"termid":"GO:0015948"}


id: PBO:0073689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 2","termid":"PBO:0073689"}


id: PBO:0072576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 4","termid":"PBO:0072576"}


id: GO:1903599
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67974],"is_not":false,"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrion degradation by autophagy.","definition_xrefs":["GOC:PARL","GOC:autophagy","GO_REF:0000058","GOC:pad","PMID:21753002","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of autophagy of mitochondrion","termid":"GO:1903146"},{"relation_name":"positively_regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0007005","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of mitochondrion degradation","type":"related"},{"name":"activation of mitophagy","type":"narrow"},{"name":"positive regulation of mitochondrial degradation","type":"broad"},{"name":"up regulation of mitochondrion degradation","type":"broad"},{"name":"up regulation of mitophagy","type":"exact"},{"name":"up-regulation of mitochondrion degradation","type":"broad"},{"name":"up-regulation of mitophagy","type":"exact"},{"name":"upregulation of mitochondrion degradation","type":"broad"},{"name":"upregulation of mitophagy","type":"exact"}],"termid":"GO:1903599","terms_by_termid":{"GO:1903599":null}}


id: GO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop.","definition_xrefs":["CL:0000037","GOC:mah","GOC:BHF","GOC:add","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell proliferation","termid":"GO:0072089"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell proliferation","synonyms":[{"name":"hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:0071425"}


id: PBO:0087585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p","termid":"PBO:0087585"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: PR:O74538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2702 gene.","definition_xrefs":["UniProtKB:O74538","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.05","synonyms":[{"name":"Spom972h-rpl2702","type":"exact"}],"termid":"PR:O74538"}


id: PBO:0052723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 15","termid":"PBO:0052723"}


id: GO:0032182
data:
  {"annotated_genes":["SJAG_02833","SJAG_01051","SJAG_02912","SJAG_01936","SJAG_00907","SJAG_00941","SJAG_00033","SJAG_00821","SJAG_02116","SJAG_00312","SJAG_04379","SJAG_02451","SJAG_03250","SJAG_01467","SJAG_01585","SJAG_01134","SJAG_00805","SJAG_02021","SJAG_00439","SJAG_04024","SJAG_03189","SJAG_03756","SJAG_00521"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73302],"is_not":false,"summary":null,"term":"GO:0032182"},{"annotations":[73140,78752,67583,70402,74743,60699,75656,77339,62299,66118,77361,77915,72554,76208,57987,65190,70996,61033,71122,60040,76700,72086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043130"}]},"cv_name":"molecular_function","definition":"Binding to a small conjugating protein such as ubiquitin or a ubiquitin-like protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00312":null,"SJAG_00439":null,"SJAG_00521":null,"SJAG_00805":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00941":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01467":null,"SJAG_01585":null,"SJAG_01936":null,"SJAG_02021":null,"SJAG_02116":null,"SJAG_02451":null,"SJAG_02833":null,"SJAG_02912":null,"SJAG_03189":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04024":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin-like protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"small conjugating protein binding","type":"exact"}],"termid":"GO:0032182","terms_by_termid":{"GO:0032182":null,"GO:0043130":null}}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: FYPO:0001482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity does not increase as a result of a heat stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to heat","termid":"FYPO:0000212"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000298","FYPO:0001985","FYPO:0000652","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity increase abolished during cellular response to heat","synonyms":[{"name":"absent increase in trehalase activity in response to high temperature","type":"exact"},{"name":"neutral trehalase activity increase abolished during cellular response to heat","type":"exact"},{"name":"trehalase activity increase abolished during cellular response to heat","type":"broad"}],"termid":"FYPO:0001482"}


id: FYPO:0001758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphatase activity","termid":"FYPO:0001756"},{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased protein phosphatase activity","synonyms":[{"name":"increased phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001758"}


id: GO:1900355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"negatively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanofuran metabolic process","synonyms":[{"name":"down regulation of methanofuran metabolic process","type":"exact"},{"name":"down regulation of methanofuran metabolism","type":"exact"},{"name":"down-regulation of methanofuran metabolic process","type":"exact"},{"name":"down-regulation of methanofuran metabolism","type":"exact"},{"name":"downregulation of methanofuran metabolic process","type":"exact"},{"name":"downregulation of methanofuran metabolism","type":"exact"},{"name":"inhibition of methanofuran metabolic process","type":"narrow"},{"name":"inhibition of methanofuran metabolism","type":"exact"},{"name":"negative regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900355"}


id: GO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a granulosa cell, a supporting cell for the developing female gamete in the ovary of mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell differentiation","termid":"GO:0060014"}


id: PBO:0088517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase Aro7","termid":"PBO:0088517"}


id: PBO:0082069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenylsulfate reductase; reduces 3'-phosphoadenylyl sulfate to adenosine-3',5'-bisphosphate and free sulfite using reduced thioredoxin as cosubstrate, involved in sulfate assimilation and methionine metabolism","termid":"PBO:0082069"}


id: PBO:0014270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAR1","termid":"PBO:0014270"}


id: GO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround a plastid and form the plastid envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"plastid envelope","termid":"GO:0009526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid membrane","termid":"GO:0042170"}


id: PBO:0027126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_heat_shock_gene_mRNA_during_vegetative_growth","termid":"PBO:0027126"}


id: GO:0009724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an abscisic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abscisic acid stimulus","synonyms":[{"name":"perception of abscisic acid stimulus","type":"related"}],"termid":"GO:0009724"}


id: GO:0102629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: patuletin + S-adenosyl-L-methionine = quercetagetin 3',6-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"patuletin 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15534"],"termid":"GO:0102629"}


id: GO:0007496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior midgut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"midgut development","termid":"GO:0007494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut development","termid":"GO:0007496"}


id: GO:1990820
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98475],"is_not":false,"summary":null,"term":"GO:1990820"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA integrity checkpoint signaling.","definition_xrefs":["PMID:7548844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"},{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in mitotic DNA integrity checkpoint","type":"exact"}],"termid":"GO:1990820","terms_by_termid":{"GO:1990820":null}}


id: PATO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000854 contact righting reflex value (obsolete PATO:0000854)","termid":"PATO:0000854"}


id: GO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"positively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis","synonyms":[{"name":"activation of positive chemotaxis","type":"narrow"},{"name":"stimulation of positive chemotaxis","type":"narrow"},{"name":"up regulation of positive chemotaxis","type":"exact"},{"name":"up-regulation of positive chemotaxis","type":"exact"},{"name":"upregulation of positive chemotaxis","type":"exact"}],"termid":"GO:0050927"}


id: GO:0061163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endoplasmic reticulum organization process that results in the structure of the endoplasmic reticulum being oriented in the cell. Endoplasmic reticulum polarization serves as a mechanism to compartmentalize cellular activities and to establish cell polarity.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum polarization","secondary_identifiers":["GO:0061167","GO:0061165","GO:0061166","GO:0061164"],"synonyms":[{"name":"ER localization involved in ER polarization at cell division site","type":"narrow"},{"name":"ER polarization","type":"exact"},{"name":"endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localisation involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"maintenance of endoplasmic reticulum location involved in endoplasmic reticulum polarization at cell division site","type":"narrow"},{"name":"transitional endoplasmic reticulum polarization at cell division site","type":"narrow"}],"termid":"GO:0061163"}


id: PBO:0081388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 227","termid":"PBO:0081388"}


id: SO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 2.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000846 RNApol_III_promoter_type_2_region (obsolete SO:0000846)","termid":"SO:0000846"}


id: GO:0008294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.","definition_xrefs":["EC:4.6.1.1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase activity","termid":"GO:0004016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"calcium- and calmodulin-responsive adenylate cyclase activity","secondary_identifiers":["Reactome:R-HSA-111930","Reactome:R-HSA-442715"],"synonyms":[{"name":"calcium- and calmodulin-responsive adenylyl cyclase activity","type":"exact"},{"name":"calcium/calmodulin-responsive adenylate cyclase activity","type":"exact"}],"termid":"GO:0008294"}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: PBO:0027681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription","termid":"PBO:0027681"}


id: FYPO:0005470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glutamate synthase (NADH) activity","synonyms":[{"name":"abnormal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abnormal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abnormal NADH: GOGAT activity","type":"related"},{"name":"abnormal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005470"}


id: GO:0072078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephron tubule are generated and organized. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule morphogenesis","termid":"GO:0061333"},{"relation_name":"is_a","term_name":"nephron epithelium morphogenesis","termid":"GO:0072088"},{"relation_name":"part_of","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule morphogenesis","termid":"GO:0072078"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["PubMed:1593629","ChEBI:15611","DeltaMass:0","RESID:AA0063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: GO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: GO:0005625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete soluble fraction (obsolete GO:0005625)","synonyms":[{"name":"soluble","type":"broad"},{"name":"soluble fraction","type":"exact"}],"termid":"GO:0005625"}


id: GO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-carrier-protein biosynthetic process (obsolete GO:0042967)","synonyms":[{"name":"ACP biosynthesis","type":"exact"},{"name":"ACP biosynthetic process","type":"exact"},{"name":"acyl carrier protein biosynthesis","type":"exact"},{"name":"acyl carrier protein biosynthetic process","type":"exact"},{"name":"acyl-carrier protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein anabolism","type":"exact"},{"name":"acyl-carrier-protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein formation","type":"exact"},{"name":"acyl-carrier-protein synthesis","type":"exact"}],"termid":"GO:0042967"}


id: PBO:0060657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 1","termid":"PBO:0060657"}


id: GO:0060073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of body fluids process in which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"micturition","secondary_identifiers":["Wikipedia:Urination"],"synonyms":[{"name":"urination","type":"exact"},{"name":"urine voiding","type":"exact"}],"termid":"GO:0060073"}


id: GO:0072004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the delineation of regions of the embryo into the area in which the kidney rudiment will develop.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"kidney rudiment formation","termid":"GO:0072003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney field specification","synonyms":[{"name":"specification of kidney anlage","type":"related"}],"termid":"GO:0072004"}


id: PBO:0082479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization","termid":"PBO:0082479"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:7592828","PMID:10066819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pinoresinol reductase activity","secondary_identifiers":["MetaCyc:RXN-8683","MetaCyc:RXN-8678"],"termid":"GO:0010283"}


id: PBO:0110975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase, implicated in energy generation","termid":"PBO:0110975"}


id: GO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting of an injured axon.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of extent of cell growth","termid":"GO:0061387"},{"relation_name":"regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting of injured axon","termid":"GO:0048686"}


id: PR:O14368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp16 gene.","definition_xrefs":["UniProtKB:O14368","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.02c","synonyms":[{"name":"16 kDa heat shock protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hsp16","type":"exact"}],"termid":"PR:O14368"}


id: PBO:0054279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1670","termid":"PBO:0054279"}


id: PBO:0035920
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_during_vegetative_growth","termid":"PBO:0035920"}


id: FYPO:0006817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006817"}


id: PR:Q9HDW8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.02","secondary_identifiers":["UniProtKB:Q9HDW8"],"synonyms":[{"name":"Spom972h-GLRX5","type":"exact"}],"termid":"PR:Q9HDW8"}


id: PBO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response Dcr2 (predicted)","termid":"PBO:0036519"}


id: PBO:0054192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1567","termid":"PBO:0054192"}


id: PBO:0041726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II beta","termid":"PBO:0041726"}


id: PR:Q10186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized bHLH domain-containing protein C3F10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.12c","synonyms":[{"name":"Spom972h-SPAC3F10.12c","type":"exact"}],"termid":"PR:Q10186"}


id: PBO:0040995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA3 divergent transcript","termid":"PBO:0040995"}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: GO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-tyrosine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine modification","termid":"GO:0018212"}


id: PBO:0071763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 10","termid":"PBO:0071763"}


id: GO:0051259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.","definition_xrefs":["GOC:ai","PMID:18293929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein complex oligomerization","secondary_identifiers":["GO:0035786"],"synonyms":[{"name":"protein multimerization","type":"related"},{"name":"protein oligomer assembly","type":"exact"},{"name":"protein oligomer biosynthesis","type":"broad"},{"name":"protein oligomer biosynthetic process","type":"broad"},{"name":"protein oligomer formation","type":"exact"},{"name":"protein oligomerization","type":"exact"}],"termid":"GO:0051259"}


id: PBO:0063516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 1","termid":"PBO:0063516"}


id: GO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"positive regulation of TLR12 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034177"}


id: GO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine.","definition_xrefs":["EC:2.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"spermine synthase activity","secondary_identifiers":["MetaCyc:SPERMINE-SYNTHASE-RXN","RHEA:19973","Reactome:R-HSA-351210"],"synonyms":[{"name":"S-adenosylmethioninamine:spermidine 3-aminopropyltransferase activity","type":"related"},{"name":"spermidine aminopropyltransferase activity","type":"related"},{"name":"spermine synthetase activity","type":"related"}],"termid":"GO:0016768"}


id: GO:0045805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eclosion","synonyms":[{"name":"activation of eclosion","type":"narrow"},{"name":"stimulation of eclosion","type":"narrow"},{"name":"up regulation of eclosion","type":"exact"},{"name":"up-regulation of eclosion","type":"exact"},{"name":"upregulation of eclosion","type":"exact"}],"termid":"GO:0045805"}


id: PBO:0004893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr7","termid":"PBO:0004893"}


id: PATO:0002039
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's curving inward on both sides or surfaces.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconcave","termid":"PATO:0002039"}


id: GO:0042148
data:
  {"annotated_genes":["SJAG_03221","SJAG_03751","SJAG_00757","SJAG_04950","SJAG_02267","SJAG_01410","SJAG_01708","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88771,93017,95144,96619,103730,106362],"is_not":false,"summary":null,"term":"GO:0042148"},{"annotations":[106368,103735,95148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[84639,88975,96622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"DNA strand invasion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop biosynthesis","type":"related"},{"name":"D-loop formation","type":"related"},{"name":"Rad51-mediated strand invasion","type":"exact"},{"name":"displacement loop biosynthesis","type":"related"},{"name":"displacement loop formation","type":"related"},{"name":"strand invasion","type":"exact"}],"termid":"GO:0042148","terms_by_termid":{"GO:0000708":null,"GO:0010774":null,"GO:0042148":null}}


id: FYPO:0004593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle, and after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype following normal mitosis","synonyms":[{"name":"abnormal cell phenotype following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and interphase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitotic nuclear division","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004593"}


id: GO:0034866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethylpentanoyl-CoA = 2,4,4-trimethylpent-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4,4-trimethylpentanoyl-CoA dehydrogenase activity","termid":"GO:0034866"}


id: PBO:0039121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allograft inflammatory factor 1","termid":"PBO:0039121"}


id: PBO:0076882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 33","termid":"PBO:0076882"}


id: PBO:0064551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 13, pseudogene","termid":"PBO:0064551"}


id: PBO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF544 family protein","termid":"PBO:0000287"}


id: FYPO:0004695
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115584],"is_not":false,"summary":null,"term":"FYPO:0004695"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular diglyceride level","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular DAG level","type":"exact"},{"name":"increased cellular diacylglycerol level","type":"exact"},{"name":"increased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"increased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"increased diglyceride accumulation","type":"related"}],"termid":"FYPO:0004695","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0004695":null}}


id: PBO:0088553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp1","termid":"PBO:0088553"}


id: PBO:0112605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein, implicated in transmembrane transport or endocytosis","termid":"PBO:0112605"}


id: PBO:0076791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 1","termid":"PBO:0076791"}


id: PBO:0090790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly ATPase Rix7","termid":"PBO:0090790"}


id: GO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP-D-glucose = beta-D-glucosyl-1,4-N-acetyl-D-glucosaminyldiphosphoundecaprenol + UDP.","definition_xrefs":["EC:2.4.1.188","MetaCyc:2.4.1.188-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphoundecaprenol glucosyltransferase activity","secondary_identifiers":["RHEA:20952"],"synonyms":[{"name":"UDP-D-glucose:N-acetylglucosaminyl pyrophosphorylundecaprenol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acetyl-D-glucosaminyldiphosphoundecaprenol 4-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-acetylglucosaminylpyrophosphorylundecaprenol glucosyltransferase activity","type":"related"}],"termid":"GO:0047245"}


id: PBO:0078504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tribbles pseudokinase 1","termid":"PBO:0078504"}


id: PBO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase (predicted)","termid":"PBO:0004965"}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-11224"],"termid":"GO:0102104"}


id: GO:1902126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-pinoresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol biosynthetic process","synonyms":[{"name":"(+)-pinoresinol anabolism","type":"exact"},{"name":"(+)-pinoresinol biosynthesis","type":"exact"},{"name":"(+)-pinoresinol formation","type":"exact"},{"name":"(+)-pinoresinol synthesis","type":"exact"}],"termid":"GO:1902126"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: GO:0010483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Interaction between the pollen tube, part of the male gametophyte, and the ovule, part of the female gametophyte, that results in the arrest of pollen tube growth, rupture of the pollen tube and the release of the sperm cells.","definition_xrefs":["GOC:tb","PMID:17673660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube reception","termid":"GO:0010483"}


id: FYPO:0004814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at highly transcribed protein-coding genes is abnormal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes","synonyms":[{"name":"abnormal RNA polymerase II release at highly transcribed protein-coding genes","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at highly transcribed protein-coding genes","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at highly transcribed protein-coding genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004814"}


id: GO:0061192
data:
  {"annotated_genes":["SJAG_03072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97526],"is_not":false,"summary":null,"term":"GO:0061192"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"negatively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03072":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061192","terms_by_termid":{"GO:0061192":null}}


id: FYECO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which peptone was added to the medium or assay buffer in excess. Peptone is a mixture of nutrients generated by proteolytic digestion of animal protein with pepsin and serves as a nitrogen and amino acid source in some culture media. Peptone is not normally added to S. pombe growth media.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ peptone","termid":"FYECO:0000200"}


id: PBO:0054314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1706","termid":"PBO:0054314"}


id: GO:0103043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate + H2O = H+ + alpha-D-ribose 1,5-bisphosphate.","definition_xrefs":["EC:3.1.4.55","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN0-6710","RHEA:34795"],"termid":"GO:0103043"}


id: GO:0102212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-4-deoxy-Delta(4)-GlcpA-(1->3)-beta-D-GalpNAc6S + H2O = 5-dehydro-4-deoxy-D-glucuronate + N-acetyl-beta-D-galactosamine 6-sulfate.","definition_xrefs":["GOC:pz","EC:3.2.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"unsaturated chondroitin disaccharide hydrolase activity","secondary_identifiers":["RHEA:31647","MetaCyc:RXN-12177"],"termid":"GO:0102212"}


id: PBO:0046300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMX2 opposite strand/antisense RNA","termid":"PBO:0046300"}


id: PBO:0072966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 1, pseudogene","termid":"PBO:0072966"}


id: GO:0034311
data:
  {"annotated_genes":["SJAG_04178","SJAG_00880","SJAG_02305","SJAG_03275","SJAG_03098","SJAG_01057","SJAG_02706","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105782,102043,101597,88883,93004,93760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[104585,86432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a diol, a compound that contains two hydroxy groups, generally assumed to be, but not necessarily, alcoholic.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01057":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_04178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dihydric alcohol metabolic process","type":"related"},{"name":"diol metabolism","type":"exact"}],"termid":"GO:0034311","terms_by_termid":{"GO:0006729":null,"GO:0046512":null}}


id: PBO:0086546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR209C is not an essential gene; partially overlaps uncharacterized gene YDR210W","termid":"PBO:0086546"}


id: PBO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 38","termid":"PBO:0070667"}


id: PBO:0059491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1","termid":"PBO:0059491"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: PBO:0002819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Pik1","termid":"PBO:0002819"}


id: PBO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic SH2 domain containing","termid":"PBO:0050644"}


id: GO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the retina is generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"retina vasculature development in camera-type eye","termid":"GO:0061298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature morphogenesis in camera-type eye","synonyms":[{"name":"retinal vasculature morphogenesis","type":"exact"}],"termid":"GO:0061299"}


id: PBO:0075737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 5","termid":"PBO:0075737"}


id: PBO:0017629
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdt2 protein half-life 10-55 minutes","termid":"PBO:0017629"}


id: GO:0042699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by follicle-stimulating hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"follicle-stimulating hormone signaling pathway","synonyms":[{"name":"follicle stimulating hormone signaling pathway","type":"exact"},{"name":"follicle stimulating hormone signalling pathway","type":"exact"},{"name":"follicle-stimulating hormone signalling pathway","type":"exact"}],"termid":"GO:0042699"}


id: SO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the five-prime end of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_LTR","synonyms":[{"name":"5' LTR","type":"exact"},{"name":"5' long terminal repeat","type":"exact"},{"name":"five prime LTR","type":"exact"}],"termid":"SO:0000425"}


id: GO:0034978
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the homeodomain proteins PDX1, PBX1b and MRG1 (MEIS2) and is involved in the transcriptional regulation of pancreatic acinar cell-specific genes.","definition_xrefs":["PMID:11279116","PMID:9710595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"PDX1-PBX1b-MRG1 complex","synonyms":[{"name":"acinar cell-specific C complex","type":"exact"}],"termid":"GO:0034978"}


id: GO:0015723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bilirubin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bilirubin transport","termid":"GO:0015723"}


id: PBO:0088947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1","termid":"PBO:0088947"}


id: PBO:0068796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 33, pseudogene","termid":"PBO:0068796"}


id: PBO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystroglycan 1","termid":"PBO:0044533"}


id: GO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A transcription regulator activity that modulates the transcription of specific gene sets via selective and non-covalent binding to a specific RNA sequence. This function is known to occur in phages and viruses, for example the lambda N and the HIV tat proteins are necessary to allow RNA polymerase to read through terminator sequences.","definition_xrefs":["GOC:txnOH-2018","PMID:1756726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"RNA-binding transcription regulator activity","synonyms":[{"name":"RNA binding transcription factor activity","type":"related"},{"name":"RNA binding transcription regulator activity","type":"exact"}],"termid":"GO:0001070"}


id: FYPO:0002368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002368"}


id: GO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that is divided into two or more physically separate molecules of nucleic acid and packaged into a single virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete segmented viral genome (obsolete GO:0019017)","termid":"GO:0019017"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: PBO:0054729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2138","termid":"PBO:0054729"}


id: PBO:0039309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALKBH3 antisense RNA 1","termid":"PBO:0039309"}


id: FYPO:0001107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutathione-disulfide reductase activity","termid":"FYPO:0001106"},{"relation_name":"is_a","term_name":"decreased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000002","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased glutathione-disulfide reductase activity","synonyms":[{"name":"decreased glutathione-disulphide reductase activity","type":"exact"},{"name":"reduced glutathione-disulfide reductase activity","type":"exact"}],"termid":"FYPO:0001107"}


id: PBO:0017945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding methyltransferase Abp140 (predicted)","termid":"PBO:0017945"}


id: GO:1902245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cis-abienol.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"cis-abienol metabolic process","termid":"GO:1902244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cis-abienol catabolic process","synonyms":[{"name":"cis-abienol breakdown","type":"exact"},{"name":"cis-abienol catabolism","type":"exact"},{"name":"cis-abienol degradation","type":"exact"}],"termid":"GO:1902245"}


id: FYPO:0007122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of assembly of one or more mitochondrial respiratory chain complexes is decreased.","definition_xrefs":["PomBase:mah","PMID:31350787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex assembly","synonyms":[{"name":"decreased mitochondrial respiratory chain complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex assembly during vegetative growth","type":"exact"},{"name":"decreased mitochondrial respiratory complex assembly","type":"exact"},{"name":"reduced mitochondrial respiratory chain complex assembly","type":"exact"}],"termid":"FYPO:0007122"}


id: PBO:0082288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF-like small GTPase of the RAS superfamily; required for recruitment of Arl1p, a GTPase that regulates membrane traffic, to the Golgi apparatus; NatC-catalyzed N-terminal acetylation regulates Golgi membrane association mediated by interaction with membrane receptor, Sys1p; similar to ADP-ribosylation factor and orthologous to mammalian ARFRP1","termid":"PBO:0082288"}


id: PBO:0031034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_organization","termid":"PBO:0031034"}


id: PBO:0086425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative helicase with limited sequence similarity to human Rb protein; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YLR419W is not an essential gene","termid":"PBO:0086425"}


id: GO:0004879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity regulated by binding to a ligand that modulates the transcription of specific gene sets transcribed by RNA polymerase II. Nuclear receptor ligands are usually lipid-based (such as a steroid hormone) and the binding of the ligand to its receptor often occurs in the cytosol, which leads to its translocation to the nucleus.","definition_xrefs":["PMID:23457262","GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"},{"relation_name":"is_a","term_name":"ligand-activated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003700","GO:0038023","GO:0140110","GO:0003674"],"is_obsolete":false,"name":"nuclear receptor activity","secondary_identifiers":["GO:0004882","GO:0004880","GO:0004887","GO:0004884","GO:0004886","GO:0003708","GO:0038050","GO:0038051","GO:0008434","GO:0038052"],"synonyms":[{"name":"1,25-(OH)2D3 receptor activity","type":"narrow"},{"name":"9-cis retinoic acid receptor activity","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, glucocorticoid-activated sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding","type":"exact"},{"name":"RXR","type":"narrow"},{"name":"androgen receptor activity","type":"narrow"},{"name":"calcitriol receptor activity","type":"narrow"},{"name":"ecdysteroid hormone receptor activity","type":"narrow"},{"name":"estrogen nuclear receptor activity","type":"narrow"},{"name":"glucocorticoid receptor activity","type":"narrow"},{"name":"juvenile hormone receptor activity","type":"narrow"},{"name":"ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"ligand-dependent nuclear receptor activity","type":"related"},{"name":"ligand-dependent transcription factor activity","type":"related"},{"name":"nuclear hormone receptor","type":"narrow"},{"name":"retinoic acid receptor activity","type":"narrow"},{"name":"retinoid-X receptor activity","type":"narrow"},{"name":"thyroid hormone receptor activity","type":"narrow"},{"name":"vitamin A receptor activity","type":"narrow"},{"name":"vitamin D receptor activity","type":"narrow"},{"name":"vitamin D3 receptor activity","type":"narrow"}],"termid":"GO:0004879"}


id: GO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"positively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"positive regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"positive regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"positive regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075031"}


id: GO:0045910
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA recombination","type":"exact"},{"name":"down-regulation of DNA recombination","type":"exact"},{"name":"downregulation of DNA recombination","type":"exact"},{"name":"inhibition of DNA recombination","type":"narrow"}],"termid":"GO:0045910","terms_by_termid":{"GO:0045128":null}}


id: GO:0140605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A motor activity driven by an electrochemical proton gradient (proton-motive force). PMF-driven motors are used by bacterial flagella.","definition_xrefs":["PMID:18216858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"proton motive force-driven motor activity","termid":"GO:0140605"}


id: GO:0047861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + 3,5-diiodo-L-tyrosine = 3-(3,5-diiodo-4-hydroxyphenyl)pyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.24","RHEA:19781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diiodotyrosine transaminase activity","secondary_identifiers":["KEGG_REACTION:R03207","MetaCyc:DIIODOTYROSINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"3,5-diiodo-L-tyrosine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"diiodotyrosine aminotransferase activity","type":"exact"},{"name":"halogenated tyrosine aminotransferase activity","type":"related"},{"name":"halogenated tyrosine transaminase activity","type":"related"}],"termid":"GO:0047861"}


id: PBO:0067015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 25, pseudogene","termid":"PBO:0067015"}


id: FYPO:0001275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hypoxia. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hypoxia","synonyms":[{"name":"decreased protein binding during cellular response to hypoxia","type":"exact"},{"name":"decreased protein-protein interaction in response to hypoxia","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001275"}


id: PBO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD53 molecule","termid":"PBO:0042330"}


id: PBO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 182 member A","termid":"PBO:0047150"}


id: GO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine nucleoside transmembrane transporter activity","termid":"GO:0015214"}


id: PBO:0089659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-T histone fold, kinetochore scaffold protein","termid":"PBO:0089659"}


id: GO:0002807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide biosynthetic process","synonyms":[{"name":"activation of antimicrobial peptide biosynthetic process","type":"narrow"},{"name":"stimulation of antimicrobial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antimicrobial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antimicrobial peptide biosynthetic process","type":"exact"}],"termid":"GO:0002807"}


id: GO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a T cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","PMID:11417857","PMID:15120183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell antigen processing and presentation","synonyms":[{"name":"T lymphocyte antigen processing and presentation","type":"exact"},{"name":"T-cell antigen processing and presentation","type":"exact"},{"name":"T-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002457"}


id: FYPO:0002914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal in intergenic regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased intergenic transcription","synonyms":[{"name":"increased intergenic transcription during mitotic cell cycle","type":"related"},{"name":"increased transcription at intergenic regions during vegetative growth","type":"exact"},{"name":"increased transcription from intergenic regions","type":"exact"},{"name":"increased transcription from intergenic regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002914"}


id: PBO:0086460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metalloprotease; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P","termid":"PBO:0086460"}


id: GO:0052517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052517)","synonyms":[{"name":"positive regulation by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052517"}


id: PBO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3j (p35)","termid":"PBO:0000977"}


id: GO:0060968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene silencing (obsolete GO:0060968)","termid":"GO:0060968"}


id: PBO:0002740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8 deconjugator Atg4 (predicted)","termid":"PBO:0002740"}


id: PATO:0001321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 90 degrees to another entity.","definition_xrefs":["thesaurus.math:thesaurus.math"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right angle to","termid":"PATO:0001321"}


id: PBO:0048155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 1","termid":"PBO:0048155"}


id: GO:0034858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxybenzothiazole + 1/2 O2 = 2,6-dihydroxybenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxybenzothiazole monooxygenase activity","termid":"GO:0034858"}


id: PBO:0077387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 127","termid":"PBO:0077387"}


id: PBO:0059523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6","termid":"PBO:0059523"}


id: PBO:0089230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria ortholog Clu1","termid":"PBO:0089230"}


id: GO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when many layers of follicle cells surround the oocyte. There is a yolk nucleus (Balbiani's Body) near the germinal vesicle.","definition_xrefs":["GOC:jid","ISBN:0198542771","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 5","type":"exact"}],"termid":"GO:0048162"}


id: FYPO:0000527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of peroxisome degradation","synonyms":[{"name":"decreased rate of pexophagy","type":"exact"},{"name":"pexophagy: decreased rate","type":"related"},{"name":"reduced rate of peroxisome degradation","type":"exact"}],"termid":"FYPO:0000527"}


id: PBO:0083439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR365C","termid":"PBO:0083439"}


id: PBO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unknown HAD superfamily hydrolase","termid":"PBO:0018252"}


id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: GO:1903051
data:
  {"annotated_genes":["SJAG_00475","SJAG_03048","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[86531,103011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteolysis involved in protein catabolic process.","definition_xrefs":["PMID:18307834","GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"negatively_regulates","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis involved in protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"down-regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"down-regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"down-regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"down-regulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"downregulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"downregulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"downregulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"downregulation of proteolysis involved in cellular protein catabolic process","type":"exact"},{"name":"inhibition of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of peptidolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of peptidolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"inhibition of peptidolysis involved in cellular protein catabolism","type":"narrow"},{"name":"inhibition of proteolysis during cellular protein catabolic process","type":"related"},{"name":"inhibition of proteolysis during cellular protein catabolism","type":"related"},{"name":"inhibition of proteolysis involved in cellular protein catabolic process","type":"narrow"},{"name":"negative regulation of peptidolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of peptidolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolic process","type":"exact"},{"name":"negative regulation of peptidolysis involved in cellular protein catabolism","type":"exact"},{"name":"negative regulation of proteolysis during cellular protein catabolic process","type":"related"},{"name":"negative regulation of proteolysis during cellular protein catabolism","type":"related"},{"name":"negative regulation of proteolysis involved in cellular protein catabolic process","type":"exact"}],"termid":"GO:1903051","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: PBO:0049516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 1","termid":"PBO:0049516"}


id: PBO:0090926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PtdIns3K complex subunit Atg38","termid":"PBO:0090926"}


id: GO:0018660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxyphenylacetate + NADH + H+ + O2 = 3,4-dihydroxyphenylacetate + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetate,NADH:oxygen oxidoreductase (3-hydroxylating) activity (obsolete GO:0018660)","secondary_identifiers":["KEGG_REACTION:R02698"],"synonyms":[{"name":"4 HPA 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate 3-monooxygenase activity","type":"broad"},{"name":"p-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"p-hydroxyphenylacetate hydroxylase activity","type":"broad"}],"termid":"GO:0018660"}


id: GO:0071057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657","PMID:10944520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-ADAM15 complex","synonyms":[{"name":"ITGAV-ITGB3-ADAM15 complex","type":"narrow"}],"termid":"GO:0071057"}


id: PBO:0108917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSTAG3 cohesin complex component like 3 (pseudogene)","termid":"PBO:0108917"}


id: GO:0004222
data:
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id: GO:0030696
data:
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id: GO:1901575
data:
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id: PR:Q09805
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00316","PANTHER:PTHR11679:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: PBO:0077320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59","termid":"PBO:0077320"}


id: GO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of renin into the blood stream by juxtoglomerular cells.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","termid":"GO:0001999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"renin secretion into blood stream","synonyms":[{"name":"renin release into blood stream","type":"exact"}],"termid":"GO:0002001"}


id: PBO:0053574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 595","termid":"PBO:0053574"}


id: GO:0106103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that resides in the cis-golgi membrane and plays a role in the tethering of COPII vesicles, through an interaction with vesicle tethering proteins (p115 in H. Sapiens and Uso1 S. cerevisiae), granting the cis-Golgi and endoplasmic reticulum to Golgi vesicle-mediated transport. It is composed by GRASP65 and GM130 protein in H. sapiens and by Bug1 and Grh1 proteins in S. cerevisiae.","definition_xrefs":["PMID:9628863","GOC:lnp","PMID:21482742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cis-Golgi network membrane","termid":"GO:0033106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"COPII vesicles tethering complex","synonyms":[{"name":"Bug1-Grh1 complex","type":"narrow"},{"name":"GRASP65-GM130 complex","type":"exact"}],"termid":"GO:0106103"}


id: PBO:0078149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 27","termid":"PBO:0078149"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4X2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: GO:0102367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2alpha-hydroxytaxusin + NADPH + O2 + H+ = 2alpha, 7beta-dihydroxytaxusin + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-alpha-hydroxytaxusin 7-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13488"],"termid":"GO:0102367"}


id: MOD:01028
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tyrosine residue with one chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated tyrosine","termid":"MOD:00987"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-tyrosine","synonyms":[{"name":"Cl1Tyr","type":"exact"}],"termid":"MOD:01028"}


id: FYPO:0007108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering takes place during meiotic prophase I, and remains incomplete. Normally, centromeres and SPBs associate during prometaphase I, but not earlier.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"abnormal centromere clustering during meiotic prophase I","type":"exact"},{"name":"abnormal chromosome retrieval during meiotic prophase I","type":"related"},{"name":"abnormal kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"abnormal meiotic centromere clustering during prophase I","type":"exact"},{"name":"increased unclustered centromeres during meiotic prophase I","type":"related"},{"name":"premature meiotic centromere clustering during meiotic prophase I","type":"related"}],"termid":"FYPO:0007108"}


id: PBO:0049117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 182","termid":"PBO:0049117"}


id: PBO:0086052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function required for oxidative damage resistance; required for normal levels of resistance to oxidative damage; null mutants are sensitive to hydrogen peroxide; member of a conserved family of proteins found in eukaryotes","termid":"PBO:0086052"}


id: FYPO:0000925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosomes are not segregated equally to the two spindle poles in a meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"unequal meiotic chromosome segregation","synonyms":[{"name":"abnormal meiotic chromosome disjunction","type":"exact"},{"name":"chromosome non-disjunction at meiosis","type":"related"},{"name":"meiotic chromosome nondisjunction","type":"related"}],"termid":"FYPO:0000925"}


id: PBO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1","termid":"PBO:0042624"}


id: PBO:0065439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 12","termid":"PBO:0065439"}


id: GO:0008597
data:
  {"annotated_genes":["SJAG_03793","SJAG_04871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84877,114585],"is_not":false,"summary":null,"term":"GO:0008597"}]},"cv_name":"molecular_function","definition":"Binds to and modulates of the activity of the enzyme calcium-dependent protein serine/threonine phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03793":null,"SJAG_04871":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-139906"],"synonyms":[{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008597","terms_by_termid":{"GO:0008597":null}}


id: PBO:0083977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p; involved in removal of two glucose residues from N-linked glycans during glycoprotein biogenesis in the ER; relocalizes from ER to cytoplasm upon DNA replication stress","termid":"PBO:0083977"}


id: PATO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000233 touch (obsolete PATO:0000233)","termid":"PATO:0000233"}


id: GO:0032508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.","definition_xrefs":["GOC:mah","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA geometric change","termid":"GO:0032392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA duplex unwinding","synonyms":[{"name":"DNA unwinding","type":"exact"},{"name":"duplex DNA melting","type":"exact"}],"termid":"GO:0032508"}


id: PATO:0005008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by low-crowned teeth. Human teeth are brachydont.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydont","termid":"PATO:0005008"}


id: PBO:0080107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP23 small subunit processome component","termid":"PBO:0080107"}


id: GO:0035279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA base pairing with near-perfect complementarity to the target mRNA will typically direct targeted endonucleolytic cleavage of the mRNA. Many plant miRNAs downregulate gene expression through this mechanism.","definition_xrefs":["PMID:15196554","GOC:dph","GOC:mtg_lung","PMID:14744438","PMID:23209154","PMID:21118121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by mRNA destabilization","synonyms":[{"name":"deadenylation involved in gene silencing by miRNA","type":"related"},{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"gene silencing by miRNA, mRNA cleavage","type":"exact"},{"name":"mRNA cleavage involved in gene silencing by miRNA","type":"exact"},{"name":"mRNA cleavage involved in gene silencing by microRNA","type":"exact"},{"name":"mRNA deadenylation-mediated gene silencing by miRNA","type":"related"},{"name":"mRNA destabilization-mediated gene silencing by miRNA","type":"exact"},{"name":"miRNA-mediated gene silencing by mRNA deadenylation","type":"related"},{"name":"miRNA-mediated gene silencing, mRNA cleavage","type":"exact"}],"termid":"GO:0035279"}


id: GO:0042907
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84593],"is_not":false,"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of xanthine from one side of a membrane to the other. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transmembrane transporter activity","termid":"GO:0005345"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"xanthine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042907","terms_by_termid":{"GO:0042907":null}}


id: GO:1901471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"positively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of syringal lignin catabolic process","synonyms":[{"name":"activation of S-lignin catabolic process","type":"exact"},{"name":"activation of syringal lignin breakdown","type":"exact"},{"name":"activation of syringal lignin catabolic process","type":"narrow"},{"name":"activation of syringal lignin catabolism","type":"exact"},{"name":"activation of syringal lignin degradation","type":"exact"},{"name":"positive regulation of S-lignin catabolic process","type":"exact"},{"name":"positive regulation of syringal lignin breakdown","type":"exact"},{"name":"positive regulation of syringal lignin catabolism","type":"exact"},{"name":"positive regulation of syringal lignin degradation","type":"exact"},{"name":"up regulation of S-lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin breakdown","type":"exact"},{"name":"up regulation of syringal lignin catabolic process","type":"exact"},{"name":"up regulation of syringal lignin catabolism","type":"exact"},{"name":"up regulation of syringal lignin degradation","type":"exact"},{"name":"up-regulation of S-lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin breakdown","type":"exact"},{"name":"up-regulation of syringal lignin catabolic process","type":"exact"},{"name":"up-regulation of syringal lignin catabolism","type":"exact"},{"name":"up-regulation of syringal lignin degradation","type":"exact"},{"name":"upregulation of S-lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin breakdown","type":"exact"},{"name":"upregulation of syringal lignin catabolic process","type":"exact"},{"name":"upregulation of syringal lignin catabolism","type":"exact"},{"name":"upregulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901471"}


id: PBO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, similar to a region of alpha-galactosidase, melibiase, possible pseudogene","termid":"PBO:0011506"}


id: PBO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oleoyl-CoA_ligase_activity","termid":"PBO:0030317"}


id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11713266","PMID:11756452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: PBO:0076586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 9","termid":"PBO:0076586"}


id: PBO:0018116
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarotes only","termid":"PBO:0018116"}


id: PBO:0053918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1215","termid":"PBO:0053918"}


id: GO:0060209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which a female is sexually receptive.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrus","synonyms":[{"name":"oestrus","type":"exact"}],"termid":"GO:0060209"}


id: GO:0005549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an odorant, any substance capable of stimulating the sense of smell.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"odorant binding","termid":"GO:0005549"}


id: GO:1905922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acetylcholine biosynthetic process.","definition_xrefs":["PMID:20164328","GOC:TermGenie","GOC:aruk","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"},{"relation_name":"is_a","term_name":"regulation of acetylcholine biosynthetic process","termid":"GO:1905921"},{"relation_name":"negatively_regulates","term_name":"acetylcholine biosynthetic process","termid":"GO:0008292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine biosynthetic process","synonyms":[{"name":"down regulation of acetylcholine anabolism","type":"exact"},{"name":"down regulation of acetylcholine biosynthesis","type":"exact"},{"name":"down regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"down regulation of acetylcholine formation","type":"exact"},{"name":"down regulation of acetylcholine synthesis","type":"exact"},{"name":"down-regulation of acetylcholine anabolism","type":"exact"},{"name":"down-regulation of acetylcholine biosynthesis","type":"exact"},{"name":"down-regulation of acetylcholine biosynthetic process","type":"exact"},{"name":"down-regulation of acetylcholine formation","type":"exact"},{"name":"down-regulation of acetylcholine synthesis","type":"exact"},{"name":"downregulation of acetylcholine anabolism","type":"exact"},{"name":"downregulation of acetylcholine biosynthesis","type":"exact"},{"name":"downregulation of acetylcholine biosynthetic process","type":"exact"},{"name":"downregulation of acetylcholine formation","type":"exact"},{"name":"downregulation of acetylcholine synthesis","type":"exact"},{"name":"inhibition of acetylcholine anabolism","type":"narrow"},{"name":"inhibition of acetylcholine biosynthesis","type":"narrow"},{"name":"inhibition of acetylcholine biosynthetic process","type":"narrow"},{"name":"inhibition of acetylcholine formation","type":"narrow"},{"name":"inhibition of acetylcholine synthesis","type":"narrow"},{"name":"negative regulation of acetylcholine anabolism","type":"exact"},{"name":"negative regulation of acetylcholine biosynthesis","type":"exact"},{"name":"negative regulation of acetylcholine formation","type":"exact"},{"name":"negative regulation of acetylcholine synthesis","type":"exact"}],"termid":"GO:1905922"}


id: PBO:0073309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 5","termid":"PBO:0073309"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: GO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which nuclear pores are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear pore localization","secondary_identifiers":["GO:0031081"],"synonyms":[{"name":"establishment and maintenance of nuclear pore localization","type":"exact"},{"name":"nuclear pore distribution","type":"related"},{"name":"nuclear pore localisation","type":"exact"},{"name":"positioning of nuclear pores","type":"related"}],"termid":"GO:0051664"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: PBO:0090927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G Mef2","termid":"PBO:0090927"}


id: PBO:0074610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 14B","termid":"PBO:0074610"}


id: GO:0007359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the posterior (abdominal) regions of the embryo are specified by the gap genes.","definition_xrefs":["ISBN:0879694238","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior abdomen determination","termid":"GO:0007359"}


id: PBO:0061727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 1","termid":"PBO:0061727"}


id: RO:HOM0000019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves two members sharing no other homologs in the lineages considered.","definition_xrefs":["BGEE:curator"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_1_homology_relationship_with","synonyms":[{"name":"1 to 1 homologous to","type":"exact"},{"name":"1:1 homology","type":"exact"},{"name":"one-to-one homology","type":"exact"}],"termid":"RO:HOM0000019"}


id: GO:0070207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein homotrimer, a macromolecular structure consisting of three noncovalently associated identical subunits.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein homooligomerization","termid":"GO:0051260"},{"relation_name":"is_a","term_name":"protein trimerization","termid":"GO:0070206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein homotrimerization","synonyms":[{"name":"protein homotrimer assembly","type":"exact"},{"name":"protein homotrimer biosynthesis","type":"exact"},{"name":"protein homotrimer biosynthetic process","type":"exact"},{"name":"protein homotrimer formation","type":"exact"}],"termid":"GO:0070207"}


id: PBO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic delta subunit","termid":"PBO:0043085"}


id: GO:0010369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in which centric, heterochromatic portions from more than one chromosomes form a compact structure.","definition_xrefs":["PMID:16831888","PMID:12384572","PMID:15053486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chromocenter","termid":"GO:0010369"}


id: GO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072367)","synonyms":[{"name":"regulation of lipid transport by regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072367"}


id: GO:0097593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the ventral disc of Giardia species (trophozoite stage) consisting of a spiral array of microtubules linked to the ventral membrane. These microtubules form the base of the ventral disc dorsal microribbons that extend nearly perpendicular from the membrane.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc microtubule array","synonyms":[{"name":"spiral microtubule array","type":"broad"},{"name":"ventral disc spiral microtubule array","type":"exact"},{"name":"ventral disk microtubule array","type":"related"}],"termid":"GO:0097593"}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: GO:0033907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-fucose residues in beta-D-fucosides.","definition_xrefs":["EC:3.2.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-D-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.38-RXN"],"synonyms":[{"name":"beta-D-fucoside fucohydrolase activity","type":"related"},{"name":"beta-fucosidase activity","type":"related"}],"termid":"GO:0033907"}


id: GO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homo- or hetero-pentameric protein complex that forms a transmembrane channel through which ions may pass in response to acetylcholine binding.","definition_xrefs":["GOC:bf","PMID:15579462","PMID:12381728","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetylcholine-gated channel complex","synonyms":[{"name":"nicotinic acetylcholine receptor","type":"broad"},{"name":"nicotinic acetylcholine-gated receptor-channel complex","type":"exact"}],"termid":"GO:0005892"}


id: PBO:0049501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 8","termid":"PBO:0049501"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_03126","SJAG_00082","SJAG_03048","SJAG_04280","SJAG_01805","SJAG_04140","SJAG_05290","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108018,101232,112058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[86132,112727,89909,98463,107261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: FYPO:0007875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:34382996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"},{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actin fusion focus","synonyms":[{"name":"normal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007875"}


id: PATO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rate","termid":"PATO:0000161"}


id: GO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin-like growth factor binding protein (obsolete GO:0017052)","synonyms":[{"name":"insulin-like growth factor binding protein","type":"exact"}],"termid":"GO:0017052"}


id: GO:0034644
data:
  {"annotated_genes":["SJAG_01648","SJAG_02182","SJAG_02818","SJAG_02200","SJAG_00814","SJAG_02199","SJAG_05197","SJAG_04150","SJAG_04877","SJAG_03898","SJAG_04190","SJAG_00729","SJAG_00863","SJAG_00208","SJAG_01262","SJAG_01010","SJAG_00272","SJAG_02828","SJAG_02334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91337,98907,100986,105176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[107478,106886,91371,85709,100306,108886,92123,108335,89761,91161,93227,84172,90068,101997,103047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to UV light stimulus","type":"exact"},{"name":"cellular response to UV radiation stimulus","type":"exact"},{"name":"cellular response to ultraviolet light stimulus","type":"exact"},{"name":"cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0034644","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: PBO:0074312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 antisense RNA 1","termid":"PBO:0074312"}


id: PBO:0080890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F1","termid":"PBO:0080890"}


id: PBO:0089946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S33","termid":"PBO:0089946"}


id: GO:0010056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of an atrichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"atrichoblast differentiation","termid":"GO:0010055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast fate specification","termid":"GO:0010056"}


id: PBO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siepin homolog","termid":"PBO:0002066"}


id: PBO:0046761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 3","termid":"PBO:0046761"}


id: PBO:0075471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 21","termid":"PBO:0075471"}


id: GO:0000428
data:
  {"annotated_genes":["SJAG_00159","SJAG_00095","SJAG_02627","SJAG_00758","SJAG_02506","SJAG_01151","SJAG_04106","SJAG_02070","SJAG_00584","SJAG_02871","SJAG_00421","SJAG_04654","SJAG_04994","SJAG_03206","SJAG_03618","SJAG_04894","SJAG_01562","SJAG_00637","SJAG_03578","SJAG_02600","SJAG_01713","SJAG_03014","SJAG_04261","SJAG_03956","SJAG_00116","SJAG_00150","SJAG_01765","SJAG_04934","SJAG_00901","SJAG_03921","SJAG_04274","SJAG_00512","SJAG_04917","SJAG_03900","SJAG_04977","SJAG_03285","SJAG_02101","SJAG_00458","SJAG_05239","SJAG_00735","SJAG_00619","SJAG_04933","SJAG_04420","SJAG_03761","SJAG_03468","SJAG_04559","SJAG_04408","SJAG_01475","SJAG_04614","SJAG_02172","SJAG_00119","SJAG_03144","SJAG_02458","SJAG_01710","SJAG_04852","SJAG_03118","SJAG_00139","SJAG_01610","SJAG_01698","SJAG_03107","SJAG_01808","SJAG_03035","SJAG_00995","SJAG_01128","SJAG_01436","SJAG_02653","SJAG_01313","SJAG_02174","SJAG_01444","SJAG_02541","SJAG_01948","SJAG_00872","SJAG_04030","SJAG_00731","SJAG_04161","SJAG_01207","SJAG_00741","SJAG_03289","SJAG_04368","SJAG_03181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113359,101379,95493,93521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[99134,91311,101418,95231,107534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[83571,91234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[85686,99415,90004,88130,86508,83837,101842,109572,98612,98756,105844,109859,83838,91846,106746,111563,110270,109573,109199,100934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[88131,92910,90005,108903,103761,105336,101843,97852,90194,109860,110715,97080,99416],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005665"},{"annotations":[103762,97853,92911,88132,105337,110716,109861,97081,90006,99417,90195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016591"},{"annotations":[88133,85687,108437,112502,98757,99418,104502,89114,109862,90007,111711,112809,94250,97580,97619,101844,107530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[103746,113369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[91682,113584,92898,99695,110284,111428,84758,102962,92134,110847,85417,96298,84500,89609,90246,83544],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[93710,111119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[89610,111027,98374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[88273,110880,86021,105045,111185,102098,104545,99231,86387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[108140,109026,102099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA-directed RNA polymerase activity.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase 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RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000428","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016591":null,"GO:0016593":null,"GO:0034245":null,"GO:0070985":null}}


id: PR:Q9UTS5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-1.","definition_xrefs":["UniProtKB:Q9UTS5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-1"],"synonyms":[{"name":"Spom972h-zas1/iso:1","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-1"}


id: PBO:0062819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast associated Ig-like receptor","termid":"PBO:0062819"}


id: GO:1904142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:25675505","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of carotenoid biosynthetic process","synonyms":[{"name":"down regulation of carotenoid anabolism","type":"exact"},{"name":"down regulation of carotenoid biosynthesis","type":"exact"},{"name":"down regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down regulation of carotenoid formation","type":"exact"},{"name":"down regulation of carotenoid synthesis","type":"exact"},{"name":"down-regulation of carotenoid anabolism","type":"exact"},{"name":"down-regulation of carotenoid biosynthesis","type":"exact"},{"name":"down-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down-regulation of carotenoid formation","type":"exact"},{"name":"down-regulation of carotenoid synthesis","type":"exact"},{"name":"downregulation of carotenoid anabolism","type":"exact"},{"name":"downregulation of carotenoid biosynthesis","type":"exact"},{"name":"downregulation of carotenoid biosynthetic process","type":"exact"},{"name":"downregulation of carotenoid formation","type":"exact"},{"name":"downregulation of carotenoid synthesis","type":"exact"},{"name":"inhibition of carotenoid anabolism","type":"narrow"},{"name":"inhibition of carotenoid biosynthesis","type":"narrow"},{"name":"inhibition of carotenoid biosynthetic process","type":"narrow"},{"name":"inhibition of carotenoid formation","type":"narrow"},{"name":"inhibition of carotenoid synthesis","type":"narrow"},{"name":"negative regulation of carotenoid anabolism","type":"exact"},{"name":"negative regulation of carotenoid biosynthesis","type":"exact"},{"name":"negative regulation of carotenoid formation","type":"exact"},{"name":"negative regulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904142"}


id: PBO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPLANE1 antisense RNA 1","termid":"PBO:0043799"}


id: PBO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic ATP-dependent RNA helicase Dbp5","termid":"PBO:0090720"}


id: GO:0042537
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60975,95467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation, or any of its derivatives.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"benzene and derivative metabolic process","type":"exact"},{"name":"benzene and derivative metabolism","type":"exact"},{"name":"benzene-containing compound metabolism","type":"exact"}],"termid":"GO:0042537","terms_by_termid":{"GO:0097052":null}}


id: PBO:0028063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposon_gene_mRNA_level","termid":"PBO:0028063"}


id: PBO:0078908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 17-1","termid":"PBO:0078908"}


id: PBO:0042974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD1 divergent transcript","termid":"PBO:0042974"}


id: PBO:0076971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 2","termid":"PBO:0076971"}


id: PBO:0081660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 584","termid":"PBO:0081660"}


id: GO:0033923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in polysaccharides, to remove successive isomaltose units from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucan 1,6-alpha-isomaltosidase activity","secondary_identifiers":["MetaCyc:3.2.1.94-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan isomaltohydrolase activity","type":"related"},{"name":"G2-dextranase activity","type":"related"},{"name":"exo-isomaltohydrolase activity","type":"related"},{"name":"isomalto-dextranase activity","type":"related"},{"name":"isomaltodextranase activity","type":"related"}],"termid":"GO:0033923"}


id: PBO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 5 (putative)","termid":"PBO:0072672"}


id: GO:0019135
data:
  {"annotated_genes":["SJAG_02285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92182],"is_not":false,"summary":null,"term":"GO:0019135"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein N6-(4-aminobutyl)-L-lysine + donor-H2 + O2 = protein N6-((R)-4-amino-2-hydroxybutyl)-L-lysine + acceptor + H2O.","definition_xrefs":["EC:1.14.99.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"deoxyhypusine monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-204662","RHEA:14101","MetaCyc:DEOXYHYPUSINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"DOHH activity","type":"related"},{"name":"deoxyhypusine dioxygenase activity","type":"related"},{"name":"deoxyhypusine hydroxylase activity","type":"exact"},{"name":"deoxyhypusine,hydrogen-donor:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0019135","terms_by_termid":{"GO:0019135":null}}


id: PBO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 2","termid":"PBO:0047349"}


id: GO:1900422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:curators","PMID:3305157","PMID:8221926"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900422)","synonyms":[{"name":"activation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900422"}


id: PBO:0055834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 4","termid":"PBO:0055834"}


id: GO:0071658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of IP-10 production","synonyms":[{"name":"regulation of CXCL10 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071658"}


id: GO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals generated as a consequence of the cytoplasmic pattern recognition receptor (PRR) MDA-5 (also known as IFIH1) binding to viral RNA.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of MDA-5 signaling pathway","synonyms":[{"name":"regulation of IFIH1 signaling pathway","type":"exact"},{"name":"regulation of MDA-5 signalling pathway","type":"exact"},{"name":"regulation of MDA5 signaling pathway","type":"exact"},{"name":"regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:0039533"}


id: GO:0005811
data:
  {"annotated_genes":["SJAG_02980","SJAG_04532","SJAG_02907","SJAG_03235","SJAG_04041","SJAG_01036","SJAG_02543","SJAG_03604","SJAG_03360","SJAG_00624","SJAG_03471","SJAG_02487","SJAG_03909","SJAG_02161","SJAG_04973","SJAG_02089","SJAG_02163","SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65744,84880,86165,86243,87997,90135,90746,93777,93865,93876,94563,98284,100755,101652,109477,110239,110843,113601],"is_not":false,"summary":null,"term":"GO:0005811"}]},"cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_01036":null,"SJAG_02089":null,"SJAG_02161":null,"SJAG_02163":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_02980":null,"SJAG_03235":null,"SJAG_03360":null,"SJAG_03471":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_03909":null,"SJAG_04041":null,"SJAG_04532":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lipid droplet","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"adiposome","type":"exact"},{"name":"lipid body","type":"exact"},{"name":"lipid particle","type":"exact"}],"termid":"GO:0005811","terms_by_termid":{"GO:0005811":null}}


id: PBO:0076097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 3","termid":"PBO:0076097"}


id: GO:0102029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + an ubiquinone = pyruvate + an ubiquinol.","definition_xrefs":["GOC:pz","RHEA:51468","PMID:10944213","PMID:4575624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-lactate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.12","MetaCyc:DLACTDEHYDROGFAD-RXN"],"termid":"GO:0102029"}


id: GO:0008106
data:
  {"annotated_genes":["SJAG_02010","SJAG_04660","SJAG_01869","SJAG_02963","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76516],"is_not":false,"summary":null,"term":"GO:0008106"},{"annotations":[87914,91123,108788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[91858,97257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[91859,97258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alcohol + NADP+ = an aldehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADPH) activity","termid":"GO:0004033"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01869":null,"SJAG_02010":null,"SJAG_02963":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15937","MetaCyc:ALCOHOL-DEHYDROGENASE-NADP+-RXN","MetaCyc:RXN0-7119"],"synonyms":[{"name":"NADP-aldehyde reductase activity","type":"exact"},{"name":"alcohol:NADP dehydrogenase activity","type":"exact"},{"name":"aldehyde reductase (NADPH) activity","type":"exact"}],"termid":"GO:0008106","terms_by_termid":{"GO:0004032":null,"GO:0008106":null,"GO:0032866":null,"GO:0032867":null}}


id: GO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with incidental electromagnetic radiation, particularly visible light, and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled photoreceptor activity","secondary_identifiers":["GO:0004975"],"synonyms":[{"name":"G protein coupled photoreceptor activity","type":"exact"},{"name":"G-protein coupled photoreceptor activity","type":"exact"},{"name":"photoreceptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008020"}


id: PBO:0111529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 9","termid":"PBO:0111529"}


id: PBO:0042936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC glutathione specific gamma-glutamylcyclotransferase 2","termid":"PBO:0042936"}


id: GO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"positively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070760"}


id: PBO:0087410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (145 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification","termid":"PBO:0087410"}


