# terms

id: PBO:0069206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 461, pseudogene","termid":"PBO:0069206"}


id: GO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of peptidyl-cysteine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["GOC:dos","VZ:3941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: PBO:0029240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomeric_heterochromatin_during_vegetative_growth","termid":"PBO:0029240"}


id: PBO:0088964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1","termid":"PBO:0088964"}


id: FYPO:0004100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, is elongated, and contains a nucleus with abnormal morphology.","definition_xrefs":["PomBase:mah","PMID:7957061"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, elongated cell with abnormal nuclear morphology","synonyms":[{"name":"inviable following spore germination, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, elongated cell with abnormal chromosome morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, elongated cell with abnormal nuclear morphology","type":"exact"}],"termid":"FYPO:0004100"}


id: PBO:0049053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 52","termid":"PBO:0049053"}


id: GO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of stimuli and a neurological response.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"blood pressure regulation by neurological process","type":"exact"},{"name":"fast control of arterial pressure","type":"related"},{"name":"neurological process involved in regulation of systemic arterial blood pressure","type":"exact"},{"name":"neurological system process involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001976"}


id: GO:0061135
data:
  {"annotated_genes":["SJAG_01072","SJAG_04211","SJAG_04398","SJAG_04484","SJAG_04633","SJAG_00460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105377,111315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061133"},{"annotations":[112873,85547,99360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[89280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a peptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase regulator activity","termid":"GO:0061134"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_01072":null,"SJAG_04211":null,"SJAG_04398":null,"SJAG_04484":null,"SJAG_04633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"endopeptidase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061135","terms_by_termid":{"GO:0004866":null,"GO:0004867":null,"GO:0061133":null}}


id: PBO:0081310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 92","termid":"PBO:0081310"}


id: PR:Q9P7V6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 33A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.15c","secondary_identifiers":["UniProtKB:Q9P7V6"],"synonyms":[{"name":"Spom972h-VPS33A","type":"exact"}],"termid":"PR:Q9P7V6"}


id: PBO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21 (predicted)","termid":"PBO:0001018"}


id: GO:0052635
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a C-20 gibberellin + 2-oxoglutarate + O2 = a C-20 2-beta-hydroxygibberellin + succinate + CO2. C-20 gibberellin refers to a gibberellin with twenty carbons.","definition_xrefs":["EC:1.14.11.13","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin 2-beta-dioxygenase activity","termid":"GO:0045543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"C-20 gibberellin 2-beta-dioxygenase activity","synonyms":[{"name":"(C-20 gibberellin-1),2-oxoglutarate:oxygen oxidoreductase (2beta-hydroxylating)","type":"exact"},{"name":"C(20) gibberellin 2-oxidase activity","type":"exact"},{"name":"C-20 GA 2-oxidase activity","type":"exact"},{"name":"C-20 gibberellin 2-beta-hydroxylase activity","type":"exact"},{"name":"C-20 gibberellin 2-oxidase activity","type":"exact"},{"name":"C-20 gibberellin 2beta-dioxygenase activity","type":"exact"},{"name":"C-20 gibberellin 2beta-hydroxylase activity","type":"exact"}],"termid":"GO:0052635"}


id: FYPO:0006838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which linear element maturation is abnormal. Linear element maturation is the close association of assembled LinE complexes with chromatin during meiotic prophase to form mature linear elements.","definition_xrefs":["PMID:30640914","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element assembly","termid":"FYPO:0000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal linear element maturation","synonyms":[{"name":"LinE chromosome loading","type":"exact"},{"name":"LinE focus formation","type":"exact"}],"termid":"FYPO:0006838"}


id: PBO:0065992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAI1 antisense RNA 1","termid":"PBO:0065992"}


id: SO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A species specific unprocessed pseudogene without a parent gene, as it has an active orthologue in another species.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unitary_pseudogene","termid":"SO:0001759"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_unitary_pseudogene","synonyms":[{"name":"transcribed unitary pseudogene","type":"exact"}],"termid":"SO:0002108"}


id: PBO:0044935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-glutamate cyclase","termid":"PBO:0044935"}


id: GO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a host cell cytoplasmic vesicle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"}


id: GO:0034964
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box H/ACA type small RNA transcript into a mature box H/ACA RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA sno(s)RNA metabolic process","termid":"GO:0033979"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA processing","type":"narrow"},{"name":"box H/ACA snoRNA processing","type":"narrow"}],"termid":"GO:0034964","terms_by_termid":{"GO:0000495":null}}


id: PBO:0077331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 68","termid":"PBO:0077331"}


id: PBO:0058242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4529","termid":"PBO:0058242"}


id: GO:0071096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to gelsolin.","definition_xrefs":["PMID:11577104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-gelsolin complex","synonyms":[{"name":"ITGAV-ITGB3-Gsn complex","type":"narrow"}],"termid":"GO:0071096"}


id: GO:0015868
data:
  {"annotated_genes":["SJAG_04325","SJAG_00612","SJAG_02050","SJAG_03334","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98934,106955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[97431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[106958,98935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The directed movement of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"purine ribonucleotide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015868","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 3, pseudogene","termid":"PBO:0045746"}


id: PBO:0059121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 like","termid":"PBO:0059121"}


id: PBO:0074514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A6","termid":"PBO:0074514"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: SO:0001423
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the dye terminator method of sequencing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dye_terminator_read","synonyms":[{"name":"dye terminator read","type":"related"}],"termid":"SO:0001423"}


id: PBO:0067985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 287","termid":"PBO:0067985"}


id: PBO:0079441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuftelin 1","termid":"PBO:0079441"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: PBO:0070270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 4","termid":"PBO:0070270"}


id: GO:0034830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z)-2,4-dihydroxydec-2-enedioate = pyruvate + 7-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r1174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(2Z)-2,4-dihydroxydec-2-enedioate aldolase activity","secondary_identifiers":["EC:4.1.3.-"],"termid":"GO:0034830"}


id: PBO:0067963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 265","termid":"PBO:0067963"}


id: GO:0035130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pectoral fin morphogenesis","termid":"GO:0035138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pectoral fin morphogenesis","termid":"GO:0035130"}


id: GO:1903785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:20944394","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"valine transport","termid":"GO:0015829"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-valine transmembrane transport","termid":"GO:1903785"}


id: GO:0019628
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110125],"is_not":false,"summary":null,"term":"GO:0019628"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of urate, the anion of uric acid, 2,6,8-trioxypurine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"urate metabolic process","termid":"GO:0046415"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"urate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P165-PWY"],"synonyms":[{"name":"urate breakdown","type":"exact"},{"name":"urate catabolism","type":"exact"},{"name":"urate degradation","type":"exact"},{"name":"uric acid catabolic process","type":"exact"}],"termid":"GO:0019628","terms_by_termid":{"GO:0019628":null}}


id: GO:0006918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of apoptosis by p53 (obsolete GO:0006918)","synonyms":[{"name":"induction of apoptosis by p53","type":"exact"}],"termid":"GO:0006918"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: PBO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soluble Myh1 level decreases in presence of cisplatin or hydrogen peroxide","termid":"PBO:0013448"}


id: PBO:0064361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate transmembrane protein, androgen induced 1","termid":"PBO:0064361"}


id: PBO:0068506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 95, pseudogene","termid":"PBO:0068506"}


id: GO:0008272
data:
  {"annotated_genes":["SJAG_02463","SJAG_00671","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[96424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[112670,63907,64939,64940,61258,106189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sulfate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006870"],"synonyms":[{"name":"sulphate transport","type":"exact"}],"termid":"GO:0008272","terms_by_termid":{"GO:1902358":null,"GO:1902434":null,"GO:1990557":null}}


id: GO:0102537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ecdysone 22-phosphate + H2O = ecdysone + hydrogenphosphate.","definition_xrefs":["GOC:pz","EC:3.1.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ecdysone-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14766"],"termid":"GO:0102537"}


id: PBO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor","termid":"PBO:0001797"}


id: PBO:0056277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN2A1 divergent transcript","termid":"PBO:0056277"}


id: GO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,7-tetrahydroxy-3-methoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,7-dimethoxyflavone + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:16181","EC:2.1.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-methylquercitin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.82-RXN","KEGG_REACTION:R05323"],"synonyms":[{"name":"3-methylquercetin 7-O-methyltransferase activity","type":"related"},{"name":"7-OMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,7-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5,7,3',4'-tetrahydroxy-3-methoxyflavone 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-O-methyltransferase activity","type":"related"},{"name":"flavonol 7-methyltransferase activity","type":"related"}],"termid":"GO:0030757"}


id: FYPO:0007349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 1.","definition_xrefs":["PomBase:vw","PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"decreased homologous chromosome pairing at omt3 locus","type":"narrow"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 1","type":"exact"}],"termid":"FYPO:0007349"}


id: PBO:0053190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin receptor overlapping transcript like 1","termid":"PBO:0053190"}


id: PBO:0063148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PATL1 divergent transcript","termid":"PBO:0063148"}


id: PBO:0085757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in negative regulation of PolIII transcription; effector kinase of the TOR signaling pathway and phosphorylates Rpc53p to regulate ribosome and tRNA biosynthesis; member of the LAMMER family of protein kinases, which are serine/threonine kinases also capable of phosphorylating tyrosine residues; capable of autophosphorylation","termid":"PBO:0085757"}


id: PATO:0002397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, circular.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcircular","synonyms":[{"name":"round","type":"related"},{"name":"rounded","type":"related"}],"termid":"PATO:0002397"}


id: PBO:0028441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactose_level_in_glycoprotein_glycan","termid":"PBO:0028441"}


id: PBO:0058477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5584","termid":"PBO:0058477"}


id: GO:1903149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any adenine transmembrane transporter activity that is involved in adenine import into cell.","definition_xrefs":["GOC:dos","ISBN:0-8249-3695-6","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine transmembrane transporter activity involved in adenine import into cell (obsolete GO:1903149)","synonyms":[{"name":"adenine transmembrane transporter activity involved in adenine import into cell","type":"exact"}],"termid":"GO:1903149"}


id: PBO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (predicted)","termid":"PBO:0001557"}


id: PBO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthetic Lethal with Rad2 mutant","termid":"PBO:0005472"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_00678","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84030,89933],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:clt","GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: PBO:0059466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 5","termid":"PBO:0059466"}


id: FYPO:0002407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable curved stubby vegetative cell population (obsolete FYPO:0002407)","synonyms":[{"name":"curved stubby viable vegetative cell population","type":"exact"}],"termid":"FYPO:0002407"}


id: FYPO:0005087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at transfer RNA (tRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at tRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at tRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at tDNA","type":"exact"},{"name":"normal protein localization to chromatin at tRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at tRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005087"}


id: GO:2000940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant-type cell wall cellulose catabolic process","termid":"GO:2000939"},{"relation_name":"is_a","term_name":"negative regulation of cell wall polysaccharide catabolic process","termid":"GO:2000967"},{"relation_name":"negatively_regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"negative regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000940"}


id: GO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded plant organelle found in the developing endosperm, contains storage proteins.","definition_xrefs":["GOC:jl","PMID:7704047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endosperm protein body","termid":"GO:0042735"}


id: GO:0051191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prosthetic group biosynthetic process","synonyms":[{"name":"coenzyme and prosthetic group biosynthesis","type":"broad"},{"name":"coenzyme and prosthetic group biosynthetic process","type":"broad"},{"name":"prosthetic group anabolism","type":"exact"},{"name":"prosthetic group biosynthesis","type":"exact"},{"name":"prosthetic group formation","type":"exact"},{"name":"prosthetic group synthesis","type":"exact"}],"termid":"GO:0051191"}


id: GO:0051305
data:
  {"annotated_genes":["SJAG_01805","SJAG_01613","SJAG_04076","SJAG_03683","SJAG_03540","SJAG_02336","SJAG_01297","SJAG_00794","SJAG_02814","SJAG_02761","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114150],"is_not":false,"summary":null,"term":"GO:0051305"},{"annotations":[95305,114152,91412,114672,96461,89900,105209,98518,111972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[99973,96463,104322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"}]},"cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome migration to spindle pole","type":"exact"},{"name":"chromosome movement","type":"broad"},{"name":"chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0051305","terms_by_termid":{"GO:0007079":null,"GO:0051305":null,"GO:1990571":null}}


id: GO:1902612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["PMID:23624077","GO_REF:0000058","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"}


id: GO:1900928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-threonine import across plasma membrane","termid":"GO:1900926"},{"relation_name":"positively_regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-threonine import across plasma membrane","synonyms":[{"name":"activation of L-threonine import","type":"narrow"},{"name":"activation of L-threonine uptake","type":"narrow"},{"name":"positive regulation of L-threonine import","type":"broad"},{"name":"positive regulation of L-threonine uptake","type":"related"},{"name":"up regulation of L-threonine import","type":"exact"},{"name":"up regulation of L-threonine uptake","type":"related"},{"name":"up-regulation of L-threonine import","type":"exact"},{"name":"up-regulation of L-threonine uptake","type":"related"},{"name":"upregulation of L-threonine import","type":"exact"},{"name":"upregulation of L-threonine uptake","type":"related"}],"termid":"GO:1900928"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0140096","GO:0016740","GO:0034212"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: PBO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga5","termid":"PBO:0036438"}


id: FYECO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na oleate","synonyms":[{"name":"sodium oleate added","type":"exact"}],"termid":"FYECO:0000089"}


id: GO:1905216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:25116364","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA binding","synonyms":[{"name":"activation of RNA binding","type":"narrow"},{"name":"up regulation of RNA binding","type":"exact"},{"name":"up-regulation of RNA binding","type":"exact"},{"name":"upregulation of RNA binding","type":"exact"}],"termid":"GO:1905216"}


id: PBO:0058365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4737","termid":"PBO:0058365"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: GO:0034243
data:
  {"annotated_genes":["SJAG_00150","SJAG_01151","SJAG_03967","SJAG_01149","SJAG_01707","SJAG_03118","SJAG_03061","SJAG_02551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[91910,101421,99138,105100,113035,102100,111345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01707":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090039"],"synonyms":[{"name":"regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034243","terms_by_termid":{"GO:0032968":null,"GO:0034244":null}}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: GO:0106061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exit from meiosis.","definition_xrefs":["GOC:al","PMID:11493649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"negatively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of exit from meiosis","termid":"GO:0106061"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: FYPO:0003600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased rRNA precursor level","synonyms":[{"name":"increased rRNA precursor accumulation","type":"related"},{"name":"increased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"increased rRNA precursor level during vegetative growth","type":"exact"},{"name":"increased rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003600"}


id: GO:1903587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23388056","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903587"}


id: PBO:0086299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in transcriptional silencing; required for normal transcription at several loci including HTA2-HTB2 and HHF2-HHT2, but not required at the other histone loci; binds with Spt10p to histone gene promoters during S phase; localizes to nuclear foci that become diffuse upon DNA replication stress","termid":"PBO:0086299"}


id: FYPO:0001782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"constricted nucleus","synonyms":[{"name":"constricted nuclei","type":"exact"},{"name":"constricted nucleus during mitotic cell cycle","type":"related"},{"name":"constricted nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0001782"}


id: PBO:0027409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027409"}


id: PBO:0077986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (TGC) 8-1","termid":"PBO:0077986"}


id: PR:P08094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2-alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.06","synonyms":[{"name":"A2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L12EI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L40C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpp201","type":"exact"}],"termid":"PR:P08094"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: PBO:0036173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036173"}


id: PBO:0110102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc chaperone Zng1, possible chaperone for mitochondrial zinc containing proteins","termid":"PBO:0110102"}


id: PBO:0068319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19B","termid":"PBO:0068319"}


id: GO:0046923
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005048","GO:0003674"],"is_obsolete":false,"name":"ER retention sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endoplasmic reticulum retention sequence binding","type":"exact"}],"termid":"GO:0046923","terms_by_termid":{"GO:0045015":null}}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: PBO:0059080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 3","termid":"PBO:0059080"}


id: GO:0008429
data:
  {"annotated_genes":["SJAG_02414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109714],"is_not":false,"summary":null,"term":"GO:0008429"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylethanolamine, a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"phosphatidylethanolamine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008429","terms_by_termid":{"GO:0008429":null}}


id: GO:0140588
data:
  {"annotated_genes":["SJAG_02606","SJAG_03418","SJAG_01067","SJAG_03926","SJAG_00682","SJAG_01831","SJAG_00796","SJAG_05019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83975,85806,87043,92335,103808,103887,106615,112905],"is_not":false,"summary":null,"term":"GO:0140588"}]},"cv_name":"biological_process","definition":"A chromatin organization process that starts with the loading of an extrusion motor (by an SMC family complex) onto the chromatin, followed by chromatin extrusion that stops at loop anchoring sites on the chromosome.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00682":null,"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_02606":null,"SJAG_03418":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"chromatin looping","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA loop extrusion","type":"exact"},{"name":"DNA looping","type":"broad"},{"name":"chromatin folding","type":"related"},{"name":"chromatin loop assembly","type":"exact"}],"termid":"GO:0140588","terms_by_termid":{"GO:0140588":null}}


id: PBO:0057736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1324","termid":"PBO:0057736"}


id: PBO:0036301
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative splicing","termid":"PBO:0036301"}


id: GO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction of the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of calcium channel activity in another organism","termid":"GO:0044472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044473"}


id: GO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll catabolic process","termid":"GO:0015996"},{"relation_name":"is_a","term_name":"chlorophyll a metabolic process","termid":"GO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyll a catabolic process","secondary_identifiers":["MetaCyc:PWY-5086","MetaCyc:PWY-5098"],"synonyms":[{"name":"chlorophyll a breakdown","type":"exact"},{"name":"chlorophyll a catabolism","type":"exact"},{"name":"chlorophyll a degradation","type":"exact"}],"termid":"GO:0033310"}


id: GO:1904230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["GOC:rl","PMID:18160053","GO_REF:0000059","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of succinate dehydrogenase activity","termid":"GO:1904229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of succinate dehydrogenase activity","synonyms":[{"name":"down regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"down regulation of fumarate reductase activity","type":"exact"},{"name":"down regulation of fumaric hydrogenase activity","type":"exact"},{"name":"down regulation of succinate dehydrogenase activity","type":"exact"},{"name":"down regulation of succinate oxidoreductase activity","type":"exact"},{"name":"down regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"down regulation of succinodehydrogenase activity","type":"exact"},{"name":"down regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"down-regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"down-regulation of fumarate reductase activity","type":"exact"},{"name":"down-regulation of fumaric hydrogenase activity","type":"exact"},{"name":"down-regulation of succinate dehydrogenase activity","type":"exact"},{"name":"down-regulation of succinate oxidoreductase activity","type":"exact"},{"name":"down-regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"down-regulation of succinodehydrogenase activity","type":"exact"},{"name":"down-regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"downregulation of fumarate dehydrogenase activity","type":"exact"},{"name":"downregulation of fumarate reductase activity","type":"exact"},{"name":"downregulation of fumaric hydrogenase activity","type":"exact"},{"name":"downregulation of succinate dehydrogenase activity","type":"exact"},{"name":"downregulation of succinate oxidoreductase activity","type":"exact"},{"name":"downregulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"downregulation of succinodehydrogenase activity","type":"exact"},{"name":"downregulation of succinyl dehydrogenase activity","type":"exact"},{"name":"inhibition of fumarate dehydrogenase activity","type":"narrow"},{"name":"inhibition of fumarate reductase activity","type":"narrow"},{"name":"inhibition of fumaric hydrogenase activity","type":"narrow"},{"name":"inhibition of succinate dehydrogenase activity","type":"narrow"},{"name":"inhibition of succinate oxidoreductase activity","type":"narrow"},{"name":"inhibition of succinate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of succinate:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of succinic acid dehydrogenase activity","type":"narrow"},{"name":"inhibition of succinodehydrogenase activity","type":"narrow"},{"name":"inhibition of succinyl dehydrogenase activity","type":"narrow"},{"name":"negative regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"negative regulation of fumarate reductase activity","type":"exact"},{"name":"negative regulation of fumaric hydrogenase activity","type":"exact"},{"name":"negative regulation of succinate oxidoreductase activity","type":"exact"},{"name":"negative regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"negative regulation of succinodehydrogenase activity","type":"exact"},{"name":"negative regulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904230"}


id: GO:0033198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ATP","synonyms":[{"name":"response to adenosine 5'-triphosphate","type":"exact"},{"name":"response to adenosine triphosphate","type":"exact"}],"termid":"GO:0033198"}


id: PBO:0038429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha 1,4-galactosyltransferase (P blood group)","termid":"PBO:0038429"}


id: PBO:0003416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Mit1","termid":"PBO:0003416"}


id: PBO:0091164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit K","termid":"PBO:0091164"}


id: PBO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 26A","termid":"PBO:0052386"}


id: PBO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuolated","termid":"PBO:0030087"}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["Unimod:276#K","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: PBO:0075546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1L-ADORA2A readthrough (NMD candidate)","termid":"PBO:0075546"}


id: PBO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin (predicted)","termid":"PBO:0036527"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: PBO:0089112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase Spg4","termid":"PBO:0089112"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: GO:2000574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microtubule motor activity.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity (obsolete GO:2000574)","synonyms":[{"name":"regulation of axonemal motor activity","type":"related"},{"name":"regulation of dynein","type":"related"},{"name":"regulation of dynein ATPase activity","type":"related"},{"name":"regulation of kinesin","type":"related"},{"name":"regulation of kinesin motor activity","type":"related"},{"name":"regulation of kinetochore motor activity","type":"related"}],"termid":"GO:2000574"}


id: RO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of epiphyte of","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_epiphyte","termid":"RO:0008502"}


id: PBO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex subunit Shg1","termid":"PBO:0001512"}


id: RO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"g is over-expressed in t iff g is expressed in t, and the expression level of g is increased relative to some background.","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"over-expressed_in","termid":"RO:0002245"}


id: GO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate catabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate breakdown","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate catabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0042217"}


id: FYPO:0000415
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic sister chromatid segregation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000337"],"is_obsolete":false,"name":"decreased mitotic sister chromatid segregation","synonyms":[{"name":"chromosome segregation: decreased","type":"broad"},{"name":"decreased chromosome segregation during vegetative growth","type":"exact"},{"name":"decreased mitotic chromosome segregation","type":"exact"},{"name":"decreased sister chromatid segregation during mitotic cell cycle","type":"related"},{"name":"reduced mitotic sister chromatid segregation","type":"exact"}],"termid":"FYPO:0000415"}


id: GO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["ISBN:0124325653","GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"},{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to singlet oxygen","termid":"GO:0000304"}


id: GO:0102277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucosaminyl-(1->4)-N-acetyl-D-glucosamine + H2O = D-glucosamine + N-acetyl-D-glucosamine.","definition_xrefs":["RHEA:62164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-acetamido-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-D-glucose exo-beta-D-glucosaminidase activity","secondary_identifiers":["MetaCyc:RXN-12544"],"termid":"GO:0102277"}


id: PR:O42928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl6 gene.","definition_xrefs":["UniProtKB:O42928","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.04","synonyms":[{"name":"Spom972h-dbl6","type":"exact"}],"termid":"PR:O42928"}


id: PBO:0073507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 2A","termid":"PBO:0073507"}


id: GO:1902661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose mediated signaling pathway.","definition_xrefs":["GOC:di","PMID:24277933","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"positively_regulates","term_name":"glucose mediated signaling pathway","termid":"GO:0010255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucose mediated signaling pathway","synonyms":[{"name":"activation of glucose mediated signaling pathway","type":"narrow"},{"name":"activation of glucose mediated signalling","type":"narrow"},{"name":"positive regulation of glucose mediated signalling","type":"exact"},{"name":"up regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up regulation of glucose mediated signalling","type":"exact"},{"name":"up-regulation of glucose mediated signaling pathway","type":"exact"},{"name":"up-regulation of glucose mediated signalling","type":"exact"},{"name":"upregulation of glucose mediated signaling pathway","type":"exact"},{"name":"upregulation of glucose mediated signalling","type":"exact"}],"termid":"GO:1902661"}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:35704701","Wikipedia:G_protein-gated_ion_channel","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: GO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","secondary_identifiers":["EC:3.5.5.-"],"termid":"GO:0016815"}


id: PBO:0017597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssz1 (predicted)","termid":"PBO:0017597"}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: GO:0050547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-feruloyl-CoA + H2O = acetyl-CoA + vanillin.","definition_xrefs":["RHEA:62412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"feruloyl-CoA hydratase/lyase activity","secondary_identifiers":["KEGG_REACTION:R12566","EC:4.2.1.101","EC:4.1.2.61","MetaCyc:RXN-21004","MetaCyc:4.2.1.101-RXN"],"synonyms":[{"name":"enoyl-CoA hydratase/aldolase activity","type":"related"},{"name":"hydroxycinnamoyl-CoA hydratase lyase activity","type":"related"},{"name":"vanillin synthase activity","type":"related"}],"termid":"GO:0050547"}


id: PBO:0054513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1913","termid":"PBO:0054513"}


id: PBO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type zinc finger","termid":"PBO:0004120"}


id: PBO:0071105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 107","termid":"PBO:0071105"}


id: PBO:0066164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 1","termid":"PBO:0066164"}


id: PBO:0059161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPRIP antisense RNA 1","termid":"PBO:0059161"}


id: PBO:0110870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Asf1","termid":"PBO:0110870"}


id: PBO:0108752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (uridine-N3-)-methyltransferase Bmt5","termid":"PBO:0108752"}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: PBO:0067186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 246, pseudogene","termid":"PBO:0067186"}


id: PBO:0110382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL5 pseudogene 1","termid":"PBO:0110382"}


id: PBO:0059116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 like RISC complex RNA helicase 1","termid":"PBO:0059116"}


id: GO:0050620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3Z)-phycocyanobilin + oxidized ferredoxin = biliverdin IXa + reduced ferredoxin.","definition_xrefs":["MetaCyc:1.3.7.5-RXN","EC:1.3.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phycocyanobilin:ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:15309"],"synonyms":[{"name":"(3Z)-phycocyanobilin:ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0050620"}


id: FYPO:0000444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have replicated genomic DNA, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with replicated DNA","synonyms":[{"name":"abnormal cell cycle arrest with replicated DNA during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with 2C DNA content","type":"narrow"},{"name":"abnormal mitotic cell cycle arrest with replicated DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000444"}


id: PBO:0044156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase 1","termid":"PBO:0044156"}


id: GO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H+ = (R)-1-aminopropan-2-yl phosphate + CO2.","definition_xrefs":["EC:4.1.1.81","RHEA:11492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"threonine-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R06530","MetaCyc:4.1.1.81-RXN"],"synonyms":[{"name":"CobD","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase [(R)-1-aminopropan-2-yl-phosphate-forming]","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase activity","type":"related"},{"name":"L-threonine-O-3-phosphate decarboxylase activity","type":"exact"}],"termid":"GO:0048472"}


id: PATO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised radially","termid":"PATO:0002178"}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: GO:0015063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An opsin with maximal absorption above 500 nm.","definition_xrefs":["PMID:10594055"],"gene_count":0,"genotype_count":0,"name":"obsolete long-wave-sensitive opsin (obsolete GO:0015063)","synonyms":[{"name":"long-wave-sensitive opsin","type":"exact"}],"termid":"GO:0015063"}


id: PBO:0004751
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia","termid":"PBO:0004751"}


id: PBO:0034261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulated_by","termid":"PBO:0034261"}


id: GO:1903845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:22269326","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903844"},{"relation_name":"negatively_regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"down regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"down-regulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"down-regulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"downregulation of cellular response to TGFbeta stimulus","type":"exact"},{"name":"downregulation of cellular response to transforming growth factor beta stimulus","type":"exact"},{"name":"inhibition of cellular response to TGF-beta stimulus","type":"narrow"},{"name":"inhibition of cellular response to TGFbeta stimulus","type":"narrow"},{"name":"inhibition of cellular response to transforming growth factor beta stimulus","type":"narrow"},{"name":"negative regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"negative regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903845"}


id: PBO:0046501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI1 exoribonuclease family member 2","termid":"PBO:0046501"}


id: PBO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer","termid":"PBO:0034785"}


id: PBO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc4","termid":"PBO:0003467"}


id: GO:0140546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to symbiont","termid":"GO:0140546"}


id: PBO:0040239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7 interacting protein","termid":"PBO:0040239"}


id: GO:0140485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 5-aminolevulinic acid from one side of a membrane to the other.","definition_xrefs":["RHEA:64816","PMID:31989647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"5-aminolevulinic acid transmembrane transporter activity","termid":"GO:0140485"}


id: PBO:0083562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene VID21/YDR359C","termid":"PBO:0083562"}


id: GO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydro-L-gulonate + H+ = L-xylulose + CO2.","definition_xrefs":["EC:4.1.1.34","RHEA:11084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydro-L-gulonate decarboxylase activity","secondary_identifiers":["MetaCyc:DEHYDRO-L-GULONATE-DECARBOXYLASE-RXN","Reactome:R-HSA-5662473","KEGG_REACTION:R01905"],"synonyms":[{"name":"3-dehydro-L-gulonate carboxy-lyase (L-xylulose-forming)","type":"related"},{"name":"3-dehydro-L-gulonate carboxy-lyase activity","type":"related"},{"name":"3-keto-L-gulonate decarboxylase activity","type":"related"},{"name":"keto-L-gulonate decarboxylase activity","type":"related"}],"termid":"GO:0047842"}


id: PBO:0081095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 4","termid":"PBO:0081095"}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: PBO:0058229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4519","termid":"PBO:0058229"}


id: PBO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MAPRE1","termid":"PBO:0001436"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0072603","GO:0042225"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: GO:0048468
data:
  {"annotated_genes":["SJAG_02248","SJAG_03557","SJAG_00826","SJAG_04140","SJAG_01769","SJAG_04470","SJAG_00821","SJAG_02241","SJAG_04271","SJAG_00114","SJAG_02736","SJAG_05309","SJAG_03688","SJAG_03915","SJAG_03057","SJAG_03013","SJAG_00974","SJAG_04236","SJAG_04010","SJAG_00971","SJAG_00486","SJAG_04184","SJAG_01662","SJAG_02712","SJAG_04238","SJAG_03581","SJAG_03536","SJAG_01321","SJAG_04275","SJAG_04868","SJAG_00993","SJAG_01483","SJAG_03250","SJAG_02529","SJAG_04859","SJAG_04901","SJAG_04080","SJAG_02320","SJAG_04922","SJAG_01531","SJAG_03483","SJAG_04483","SJAG_02392","SJAG_04853","SJAG_00663","SJAG_03587","SJAG_04615","SJAG_04781","SJAG_03746","SJAG_00405","SJAG_02169","SJAG_00514","SJAG_03090"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91949,90678,85997],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[93038,96802,92621,103787,106179,101176,91472,92970,100204,107566,108764,114543,109993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[90564],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[110139,87870,113799,84370,86378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113809,100247,105139,113800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84858],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[87603,93685,101027,105369,106180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[87397,115018,95907,109994,114544,97788,114837,95975,101342,103450,94915,112967,93645,93686,106181,91473,95906],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[93646,95908,103788,102893,99000,100205,109995,88394,92971,95909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107258],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86850],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98369],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86852],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88289],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[90605,95910,95911,102070,96194,112020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"terminal differentiation","type":"related"}],"termid":"GO:0048468","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: SO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uniparental disomy is a sequence_alteration where a diploid individual receives two copies for all or part of a chromosome from one parent and no copies of the same chromosome or region from the other parent.","definition_xrefs":["SO:BM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPD","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Uniparental_disomy"],"synonyms":[{"name":"UPD","type":"exact"},{"name":"uniparental disomy","type":"exact"}],"termid":"SO:0001744"}


id: MOD:00973
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidation of proline (to glutamic acid)","termid":"MOD:00973"}


id: MOD:00898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["Unimod:377","PubMed:9056182","RESID:AA0107#var","PubMed:10896212","PubMed:4575979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"Diacylglycerol","type":"related"},{"name":"diacylglycerol","type":"related"}],"termid":"MOD:00898"}


id: PBO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone (predicted)","termid":"PBO:0018198"}


id: PBO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by oleic acid","termid":"PBO:0000463"}


id: GO:0016722
data:
  {"annotated_genes":["SJAG_04677","SJAG_04743","SJAG_04042","SJAG_04459","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98809,86160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"},{"annotations":[99870,108853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052851"},{"annotations":[109944,88557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the oxidation state of metal ion is altered.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":5,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04042":null,"SJAG_04459":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.16.-.-","Reactome:R-HSA-917805"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions","type":"related"},{"name":"oxidoreductase activity, reducing metal ions","type":"related"}],"termid":"GO:0016722","terms_by_termid":{"GO:0004322":null,"GO:0030586":null,"GO:0052851":null}}


id: GO:0008543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"FGF receptor signaling pathway","type":"exact"},{"name":"FGF receptor signalling pathway","type":"exact"},{"name":"FGFR signaling pathway","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0008543"}


id: PBO:0072770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein Z","termid":"PBO:0072770"}


id: PBO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0036067"}


id: PBO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 149","termid":"PBO:0042082"}


id: GO:0060604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the mammary gland duct by the hollowing out of a solid rod.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube lumen cavitation","termid":"GO:0060605"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct cavitation","synonyms":[{"name":"milk duct cavitation","type":"related"}],"termid":"GO:0060604"}


id: GO:0009184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside diphosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"purine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009184"}


id: GO:0034380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-covalent aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle assembly","termid":"GO:0034377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle assembly","synonyms":[{"name":"HDL assembly","type":"exact"}],"termid":"GO:0034380"}


id: GO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glucagon-like peptide 1 and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["PMID:12529935","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"glucagon-like peptide 1 receptor activity","termid":"GO:0044508"}


id: PBO:0051805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQSEC3 antisense RNA 1","termid":"PBO:0051805"}


id: PBO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol pyrophosphatase Siw14","termid":"PBO:0110068"}


id: GO:0052471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of systemic acquired resistance in symbiont (obsolete GO:0052471)","synonyms":[{"name":"modulation by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052471"}


id: PBO:0091031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER chaperone Rot1","termid":"PBO:0091031"}


id: GO:0004385
data:
  {"annotated_genes":["SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98319],"is_not":false,"summary":null,"term":"GO:0004385"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GMP = ADP + GDP.","definition_xrefs":["EC:2.7.4.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"guanylate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9748949","Reactome:R-HSA-73788","Reactome:R-HSA-9748963","MetaCyc:GUANYL-KIN-RXN","Reactome:R-HSA-110133","RHEA:20780"],"synonyms":[{"name":"5'-GMP kinase activity","type":"related"},{"name":"ATP:(d)GMP phosphotransferase activity","type":"related"},{"name":"ATP:GMP phosphotransferase activity","type":"related"},{"name":"GMP kinase activity","type":"related"},{"name":"deoxyguanylate kinase activity","type":"related"},{"name":"guanosine monophosphate kinase activity","type":"related"},{"name":"membrane-associated guanylate kinase","type":"narrow"}],"termid":"GO:0004385","terms_by_termid":{"GO:0004385":null}}


id: PBO:0052484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 9","termid":"PBO:0052484"}


id: PBO:0046629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 10","termid":"PBO:0046629"}


id: PR:000050517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PMID:22375066","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/Phos(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/Phos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, MOD:00047","type":"narrow"},{"name":"ssp2/Phos(T189)","type":"exact"}],"termid":"PR:000050517"}


id: GO:0010339
data:
  {"annotated_genes":["SJAG_04864","SJAG_00239","SJAG_01975","SJAG_04720","SJAG_04723"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84845,88594,88595,96881,96882,112004,112005],"is_not":false,"summary":null,"term":"GO:0010339"},{"annotations":[102917,97144,97721,99051,98797,97722,99052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070263"}]},"cv_name":"cellular_component","definition":"The side of the cell wall that is opposite to the side that faces the cell and its contents.","definition_xrefs":["GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_01975":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04864":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005618","GO:0005575","GO:0009986"],"is_obsolete":false,"name":"external side of cell wall","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010339","terms_by_termid":{"GO:0010339":null,"GO:0070263":null}}


id: GO:0106093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.","definition_xrefs":["GOC:bhm","PMID:11574472","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EDS1 disease-resistance complex","synonyms":[{"name":"EDS1-PAD4 complex","type":"narrow"},{"name":"EDS1-PAD4-SAG101 complex","type":"narrow"},{"name":"EDS1-SAG101 complex","type":"narrow"}],"termid":"GO:0106093"}


id: PBO:0090480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, oxidative stress-responsive Pap1/Caf3","termid":"PBO:0090480"}


id: PBO:0086729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not conserved in closely related Saccharomyces species; 85% of ORF overlaps verified gene NET1, but does not share all phenotypes; null mutant is slow-growing, sensitive to heat, sorbate, and other various chemicals","termid":"PBO:0086729"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04380","SJAG_03771","SJAG_01997","SJAG_04123","SJAG_00106","SJAG_00376","SJAG_04189","SJAG_03275","SJAG_01054","SJAG_02400","SJAG_04681","SJAG_00352","SJAG_01673","SJAG_04711","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[85337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[104443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[113200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[83632,97223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[111079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[114985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[108477,104414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[103930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[100314,97190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00352":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.-"],"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0052717":null}}


id: GO:2000783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000782"},{"relation_name":"negatively_regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000783"}


id: PBO:0081009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 45","termid":"PBO:0081009"}


id: PBO:0054060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1404","termid":"PBO:0054060"}


id: GO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an auditory receptor cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell development","termid":"GO:0060119"},{"relation_name":"part_of","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell development","synonyms":[{"name":"auditory hair cell development","type":"exact"}],"termid":"GO:0060117"}


id: GO:0003164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the His-Purkinje system over time, from its formation to the mature structure. The His-Purkinje system receives signals from the AV node and is composed of the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"cardiac conduction system development","termid":"GO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system development","termid":"GO:0003164"}


id: PBO:0081487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 383","termid":"PBO:0081487"}


id: PBO:0005014
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ALG11","termid":"PBO:0005014"}


id: GO:0100038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates cellular response to oxidative stress.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular response to oxidative stress by transcription from RNA polymerase II promoter (obsolete GO:0100038)","termid":"GO:0100038"}


id: PBO:0068938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 181, pseudogene","termid":"PBO:0068938"}


id: GO:0003327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to a type B pancreatic cell fate and its capacity to differentiate into a type B pancreatic cell. A type B pancreatic cell is a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["GOC:dph","CL:0000169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"type B pancreatic cell differentiation","termid":"GO:0003309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell fate commitment","synonyms":[{"name":"pancreatic B cell fate commitment","type":"exact"}],"termid":"GO:0003327"}


id: PR:O94248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A midasin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22908:SF14","OMA:SCHPO04871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.08","secondary_identifiers":["UniProtKB:O94248"],"synonyms":[{"name":"MIDAS-containing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MDN1","type":"exact"}],"termid":"PR:O94248"}


id: FYPO:0005229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from one or more RNA polymerase II promoters occurs to a lower extent than normal.","definition_xrefs":["PMID:17339332","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"decreased transcription from RNA pol II promoter during vegetative growth","type":"exact"},{"name":"decreased transcription from RNA polymerase II promoter during mitotic cell cycle","type":"related"},{"name":"reduced transcription from RNA polymerase II promoter","type":"exact"}],"termid":"FYPO:0005229"}


id: GO:0015477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A porin of the bacterial outer membrane that forms transmembrane pores and transports relatively large molecules from the external milieu to the periplasm in an energized process. Energizing of transport across the outer membrane requires a heterotrimeric complex of proteins, the TonB-ExbB-ExbD complex, or in some cases, the TolA-TolQ-TolR complex. Energizing requires proton motive force across the cytoplasmic membrane.","definition_xrefs":["TC:1.B.13.-.-","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor porin activity (obsolete GO:0015477)","synonyms":[{"name":"receptor porin activity","type":"exact"}],"termid":"GO:0015477"}


id: PBO:0016897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA (N6-adenosine)-methyltransferase Ime4 (predicted)","termid":"PBO:0016897"}


id: GO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a brassinosteroid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of brassinosteroid stimulus","synonyms":[{"name":"perception of brassinosteroid stimulus","type":"related"}],"termid":"GO:0009729"}


id: PBO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 6","termid":"PBO:0060570"}


id: PBO:0040193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 6","termid":"PBO:0040193"}


id: PBO:0080920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 9","termid":"PBO:0080920"}


id: PBO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Elf1","termid":"PBO:0001325"}


id: FYPO:0000659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000653","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished DNA binding","synonyms":[{"name":"DNA binding abolished","type":"exact"}],"termid":"FYPO:0000659"}


id: PBO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member B","termid":"PBO:0047202"}


id: PR:O94642
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR11079:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.10","secondary_identifiers":["UniProtKB:O94642"],"synonyms":[{"name":"SPBC16D10.10","type":"related"},{"name":"Spom972h-ADAT2","type":"exact"},{"name":"tRNA-specific adenosine-34 deaminase subunit tad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94642"}


id: PBO:0065106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C alpha","termid":"PBO:0065106"}


id: MOD:01069
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4-dinitrophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4-dinitrophenyl modified residue","synonyms":[{"name":"Dnp","type":"exact"}],"termid":"MOD:01069"}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: PR:O14313
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin-5, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin pmp20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.06c","secondary_identifiers":["UniProtKB:O14313"],"synonyms":[{"name":"SPCC330.06c","type":"related"},{"name":"Spom972h-PRDX5","type":"exact"},{"name":"peroxisomal membrane protein pmp20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14313"}


id: GO:0061328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior Malpighian tubule over time, from its formation to the mature structure. The pair of posterior tubules arise from a ventrolateral region of the embryonic hindgut and project backwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior Malpighian tubule development","termid":"GO:0061328"}


id: GO:0102839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:2-2-16:2-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.35","MetaCyc:RXN-8299"],"termid":"GO:0102839"}


id: GO:0045924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity","secondary_identifiers":["GO:0060181"],"synonyms":[{"name":"female receptivity","type":"related"}],"termid":"GO:0045924"}


id: PR:Q9USQ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC902.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein spo7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.03","synonyms":[{"name":"Spom972h-SPBC902.03","type":"exact"}],"termid":"PR:Q9USQ0"}


id: PBO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 1","termid":"PBO:0050695"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: FYPO:0006091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization begins earlier than normal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:20705471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"premature actin cortical patch internalization","synonyms":[{"name":"advanced actin cortical patch internalization","type":"exact"},{"name":"premature actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"premature actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"premature actin patch internalization","type":"exact"}],"termid":"FYPO:0006091"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88074],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: PBO:0015688
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae PRP6","termid":"PBO:0015688"}


id: PBO:0055373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2802","termid":"PBO:0055373"}


id: GO:0033974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of mixed phospho-anhydride bonds.","definition_xrefs":["EC:3.6.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"nucleoside phosphoacylhydrolase activity","secondary_identifiers":["MetaCyc:3.6.1.24-RXN"],"synonyms":[{"name":"nucleoside-5'-phosphoacylate acylhydrolase activity","type":"related"}],"termid":"GO:0033974"}


id: GO:0002801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide secretion","termid":"GO:0002795"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide secretion","termid":"GO:0002800"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide secretion","termid":"GO:0002782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide secretion","synonyms":[{"name":"down regulation of antifungal peptide secretion","type":"exact"},{"name":"down-regulation of antifungal peptide secretion","type":"exact"},{"name":"downregulation of antifungal peptide secretion","type":"exact"},{"name":"inhibition of antifungal peptide secretion","type":"narrow"}],"termid":"GO:0002801"}


id: PBO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_origin_firing_efficiency","termid":"PBO:0030369"}


id: GO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont involved in interaction with host (obsolete GO:0044144)","synonyms":[{"name":"modulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044144"}


id: GO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of neuroblast polarity","secondary_identifiers":["GO:0043340","GO:0043343"],"synonyms":[{"name":"establishment of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045200"}


id: PBO:0084191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2B; core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates reassembly after DNA replication, transcriptional activation, meiotic DSB formation and H3 methylation","termid":"PBO:0084191"}


id: GO:0006261
data:
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id: GO:0007465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R7 photoreceptor commits to its cell fate. The R7 receptor contributes the central part of the rhabdomere in the apical parts of the ommatidium.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R7 cell fate commitment","termid":"GO:0007465"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["UM-BBD_enzymeID:e0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"triethanolamine lyase activity","termid":"GO:0018825"}


id: PBO:0062409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 36 pseudogene","termid":"PBO:0062409"}


id: PBO:0109011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 11, pseudogene","termid":"PBO:0109011"}


id: GO:0009705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vacuole that retains the same shape regardless of cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole membrane","synonyms":[{"name":"membrane of vacuole with cell cycle-independent morphology","type":"exact"},{"name":"tonoplast","type":"exact"},{"name":"vacuolar membrane","type":"broad"}],"termid":"GO:0009705"}


id: MOD:00556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +94","synonyms":[{"name":"Acrolein addition +94","type":"related"},{"name":"Delta:H(6)C(6)O(1)","type":"related"}],"termid":"MOD:00556"}


id: GO:0140613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(in) = ADP + H+ + Mn2+(out) + phosphate.","definition_xrefs":["PMID:11134055","PMID:21187401","PMID:15590060","PMID:15831496","RHEA:66820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type manganese transporter activity","secondary_identifiers":["MetaCyc:RXN-20940"],"termid":"GO:0140613"}


id: GO:0071923
data:
  {"annotated_genes":["SJAG_01825","SJAG_03591","SJAG_01716","SJAG_05978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111382,87841,102316,102411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","PMID:17113138","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"},{"relation_name":"is_a","term_name":"regulation of cohesin loading","termid":"GO:0071922"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to chromatin","termid":"GO:0120186"},{"relation_name":"negatively_regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923","terms_by_termid":{"GO:1905412":null}}


id: GO:0022003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that stops, prevents or reduces the frequency or rate at which cell adopts an anterior neural cell fate, generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:jid","GOC:tb","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anterior neural cell fate commitment of the neural plate","termid":"GO:0022001"},{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of anterior neural cell fate commitment of the neural plate by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"fgf receptor signaling involved in down regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in down-regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in downregulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signaling involved in inhibition of anterior neural cell fate of the neural plate","type":"narrow"},{"name":"fgf receptor signaling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"fgf receptor signalling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"}],"termid":"GO:0022003"}


id: PBO:0067859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 161","termid":"PBO:0067859"}


id: GO:0009248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a K antigen, a capsular polysaccharide antigen carried on the surface of bacterial capsules that masks somatic (O) antigens.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"K antigen metabolic process","termid":"GO:0046375"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"K antigen biosynthetic process","synonyms":[{"name":"K antigen anabolism","type":"exact"},{"name":"K antigen biosynthesis","type":"exact"},{"name":"K antigen formation","type":"exact"},{"name":"K antigen synthesis","type":"exact"}],"termid":"GO:0009248"}


id: PR:O13848
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19G12.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADP-dependent indole-3-acetaldehyde reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.09","synonyms":[{"name":"AKR3C2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC19G12.09","type":"exact"}],"termid":"PR:O13848"}


id: PBO:0038771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 10","termid":"PBO:0038771"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: MOD:01698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an amino group with a trimethylaminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated protonated-residue","synonyms":[{"name":"N2Me3+Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01698"}


id: PBO:0079361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 3g pseudogene","termid":"PBO:0079361"}


id: PBO:0041032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2B","termid":"PBO:0041032"}


id: PBO:0002684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl-sulfate kinase (predicted)","termid":"PBO:0002684"}


id: SO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome where regulatory events occur, including epigenetic modifications. These epigenetic modifications can include nucleosome modifications and post-replicational DNA modifications.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin_regulatory_region","synonyms":[{"name":"chromatin regulatory region","type":"exact"}],"termid":"SO:0002306"}


id: PBO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","termid":"PBO:0012841"}


id: GO:1903418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a plasma membrane of cell tip.","definition_xrefs":["PMID:25157670","GO_REF:0000087","GOC:TermGenie","PMID:27852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to plasma membrane of cell tip","synonyms":[{"name":"protein localisation in plasma membrane of cell tip","type":"exact"},{"name":"protein localisation to plasma membrane of cell tip","type":"exact"},{"name":"protein localization in plasma membrane of cell tip","type":"exact"}],"termid":"GO:1903418"}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: GO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"down regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"downregulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"inhibition of antibacterial peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002809"}


id: PBO:0073645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC family like 1","termid":"PBO:0073645"}


id: SO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000503 alternately_spliced_gene_encodeing_one_transcript (obsolete SO:0000503)","termid":"SO:0000503"}


id: PBO:0034536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subtelomere-derived_RNA_level","termid":"PBO:0034536"}


id: PBO:0088765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone, gankyrin","termid":"PBO:0088765"}


id: GO:0046968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a peptide antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peptide antigen transport","termid":"GO:0046968"}


id: FYPO:0006181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","termid":"FYPO:0006100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic interphase","type":"exact"}],"termid":"FYPO:0006181"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115581],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115559,115557,115571,115556,115568],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["GO:0007029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_01906","SJAG_02763","SJAG_00426"],"single_locus_genotype_uniquenames":["ned1delta","nem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0059453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSANTD3 pseudogene 1","termid":"PBO:0059453"}


id: PBO:0110194
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_needs_approval_timestamp","termid":"PBO:0110194"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:25046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r1622","MetaCyc:RXN-12070","EC:3.7.1.14"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: PBO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2","termid":"PBO:0075504"}


id: PBO:0109616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 16, pseudogene","termid":"PBO:0109616"}


id: PBO:0082864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D3; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D3","termid":"PBO:0082864"}


id: PBO:0072955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase 5","termid":"PBO:0072955"}


id: PBO:0087841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine deaminase, catalyzes first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation","termid":"PBO:0087841"}


id: PBO:0091993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leucine transmembrane transporter Agp3","termid":"PBO:0091993"}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: GO:1900900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heptadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"negatively_regulates","term_name":"heptadecane metabolic process","termid":"GO:1900635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heptadecane metabolic process","synonyms":[{"name":"down regulation of heptadecane metabolic process","type":"exact"},{"name":"down regulation of heptadecane metabolism","type":"related"},{"name":"down-regulation of heptadecane metabolic process","type":"exact"},{"name":"down-regulation of heptadecane metabolism","type":"related"},{"name":"downregulation of heptadecane metabolic process","type":"exact"},{"name":"downregulation of heptadecane metabolism","type":"related"},{"name":"inhibition of heptadecane metabolic process","type":"narrow"},{"name":"inhibition of heptadecane metabolism","type":"narrow"},{"name":"negative regulation of heptadecane metabolism","type":"related"}],"termid":"GO:1900900"}


id: PBO:0047839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD dependent oxidoreductase domain containing 2","termid":"PBO:0047839"}


id: PBO:0084043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI lipid remodelase; responsible for introducing ceramides into GPI anchors having a C26:0 fatty acid in sn-2 of the glycerol moiety; can also use lyso-GPI protein anchors and various base resistant lipids as substrates; contains 14-16 transmembrane segments and several putative glycosylation and phosphorylation sites; null mutation is synthetically lethal with pkc1 deletion","termid":"PBO:0084043"}


id: FYPO:0005769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing G-quartet (G4) motifs. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:25471935","PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at G4 motif during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at G-quadruplex during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G-quartet during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at G4 motif during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005769"}


id: PBO:0017411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-agent_in","termid":"PBO:0017411"}


id: PBO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apparent_orthology_relationship_with","termid":"PBO:0034071"}


id: FYPO:0000385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type). Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal macroautophagy","synonyms":[{"name":"autophagy: normal","type":"broad"}],"termid":"FYPO:0000385"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: GO:0034203
data:
  {"annotated_genes":["SJAG_02897","SJAG_03774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90524,108613],"is_not":false,"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of glycolipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["PMID:11807558","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"glycolipid translocation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034203","terms_by_termid":{"GO:0034203":null}}


id: FYPO:0005783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic checkpoint complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic checkpoint complex assembly","synonyms":[{"name":"normal MCC assembly","type":"exact"},{"name":"normal mitotic checkpoint complex assembly during mitotic cell cycle","type":"related"},{"name":"normal mitotic checkpoint complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005783"}


id: GO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation","termid":"GO:0034305"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"oomycete sporangium development","termid":"GO:0075321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oomycete sporangium development","termid":"GO:0075322"}


id: GO:0008537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome activator complex","synonyms":[{"name":"PA28","type":"narrow"}],"termid":"GO:0008537"}


id: FYPO:0007147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Mei2 nuclear dot formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Mei2 nuclear dot formation","synonyms":[{"name":"normal Mei2 nuclear dot assembly","type":"exact"},{"name":"normal meiRNA nuclear dot formation","type":"related"}],"termid":"FYPO:0007147"}


id: GO:0050767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurogenesis","termid":"GO:0050767"}


id: GO:0052447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052447)","synonyms":[{"name":"modulation by organism of symbiont ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052447"}


id: FYECO:0000006
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115170,115440,115441,115442,115456,115458,115459,115460,115584,115585,115262,115583,115265],"is_not":false,"summary":null,"term":"FYECO:0000006"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed, or cells were grown, at a low temperature (typically lower than ~25 degrees Celsius).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01946":null,"SJAG_01956":null,"SJAG_03048":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_05207":null},"genotype_count":10,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"low temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:30664646":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_03198","SJAG_03575","SJAG_01956","SJAG_01946","SJAG_03048","SJAG_03351","SJAG_05207"],"single_locus_genotype_uniquenames":["oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","cem1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","oar2delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression"],"synonyms":[{"name":"17 degrees Celsius","type":"narrow"},{"name":"18 degrees Celsius","type":"narrow"},{"name":"19 degrees Celsius","type":"narrow"},{"name":"20 degrees Celsius","type":"narrow"},{"name":"21 degrees Celsius","type":"narrow"},{"name":"22 degrees Celsius","type":"narrow"},{"name":"23 degrees Celsius","type":"narrow"},{"name":"24 degrees Celsius","type":"narrow"},{"name":"cold","type":"related"}],"termid":"FYECO:0000006","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null}}


id: PBO:0091670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal5h2","termid":"PBO:0091670"}


id: PBO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 12","termid":"PBO:0071335"}


id: PR:Q9UTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YbaZ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.04c","secondary_identifiers":["UniProtKB:Q9UTN9"],"synonyms":[{"name":"Spom972h-ybaZ","type":"exact"}],"termid":"PR:Q9UTN9"}


id: MOD:00030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an N-formyl-L-methionine, a natural pretranslational modification.","definition_xrefs":["Unimod:107#N-term","OMSSA:22","PubMed:10825024","PubMed:11152118","RESID:AA0021#FMET","PubMed:8758896","PubMed:2165784","ChEBI:33718","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-methionine residue","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"Addition of N-formyl met","type":"related"},{"name":"FormylMet","type":"related"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"fMet","type":"exact"},{"name":"nformylmet","type":"exact"}],"termid":"MOD:00030"}


id: PBO:0040644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 1A","termid":"PBO:0040644"}


id: PBO:0083975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible alcohol dehydrogenase II; catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1","termid":"PBO:0083975"}


id: PBO:0068586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 37, pseudogene","termid":"PBO:0068586"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: PBO:0076834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: PBO:0071037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 39","termid":"PBO:0071037"}


id: GO:0009302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of snoRNA class RNA (also referred to as sRNA in Archaea) from a DNA template.","definition_xrefs":["PMID:17284456","GOC:krc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"sno(s)RNA transcription","synonyms":[{"name":"sRNA transcription","type":"narrow"},{"name":"snoRNA transcription","type":"narrow"}],"termid":"GO:0009302"}


id: GO:0017106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete activin inhibitor activity (obsolete GO:0017106)","synonyms":[{"name":"activin inhibitor activity","type":"exact"}],"termid":"GO:0017106"}


id: GO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any small intestinal transit process, the migration of ingested material along the length of the small intestine.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"small intestinal transit","termid":"GO:0120055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of small intestinal transit","synonyms":[{"name":"regulation of small bowel transit","type":"exact"},{"name":"regulation of small intestine transit","type":"exact"}],"termid":"GO:0120057"}


id: PBO:0071038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 40","termid":"PBO:0071038"}


id: GO:1902167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902231"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902255"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"activation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"}],"termid":"GO:1902167"}


id: PBO:0013791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein Hal3","termid":"PBO:0013791"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of CD86 production","termid":"GO:0150140"},{"relation_name":"positively_regulates","term_name":"CD86 biosynthetic process","termid":"GO:0035781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD86 production","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: PBO:0026810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0026810"}


id: PATO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000562 mass value (obsolete PATO:0000562)","termid":"PATO:0000562"}


id: PBO:0089136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase Bst1","termid":"PBO:0089136"}


id: GO:0015341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane: Zn2+(out) = Zn2+(in). The activity is driven by proton motive force.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:2.A.4.2.3","TC:2.A.4.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"zinc efflux transmembrane transporter activity","termid":"GO:0022883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"zinc efflux active transmembrane transporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"broad"}],"termid":"GO:0015341"}


id: PBO:0040134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 18","termid":"PBO:0040134"}


id: PBO:0086220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that facilitates ribosomal subunit dissociation; Dom34-Hbs1 complex and Rli1p have roles in dissociating inactive ribosomes to facilitate translation restart, particularly ribosomes stalled in 3' UTRs; required for RNA cleavage in no-go decay, but reports conflict on endonuclease activity; Pelota ortholog; protein abundance increases in response to DNA replication stress; DOM34 has a paralog, YCL001W-B, that arose from the whole genome duplication","termid":"PBO:0086220"}


id: PBO:0054585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1988","termid":"PBO:0054585"}


id: GO:1905423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:tb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"positively_regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant organ morphogenesis","synonyms":[{"name":"activation of plant organ morphogenesis","type":"narrow"},{"name":"up regulation of plant organ morphogenesis","type":"exact"},{"name":"up-regulation of plant organ morphogenesis","type":"exact"},{"name":"upregulation of plant organ morphogenesis","type":"exact"}],"termid":"GO:1905423"}


id: GO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dATP, deoxyadenosine triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dATP binding","termid":"GO:0032564"}


id: PATO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of or possessing inorganic material.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mineralized","termid":"PATO:0002444"}


id: GO:0150195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:21349151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"transport across BCSFB","type":"exact"},{"name":"transport across blood-CSF barrier","type":"exact"},{"name":"transport across blood/CSF barrier","type":"exact"},{"name":"transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0150195"}


id: PBO:0067659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 836, pseudogene","termid":"PBO:0067659"}


id: GO:0071986
data:
  {"annotated_genes":["SJAG_03928","SJAG_00688","SJAG_03089","SJAG_01032"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88988,90162,101184,103915],"is_not":false,"summary":null,"term":"GO:0071986"}]},"cv_name":"cellular_component","definition":"A vacuolar membrane-anchored guanine nucleotide exchange factor (GEF) complex for the Rag GTPases (Gtr1-Gtr2 GTPase complex GO:1990131) in TORC1 signaling pathway. In human, Ragulator is comprised of the membrane anchor subunit LAMTOR1 (Meh1p in S. cerevisiae, Lam1 in S. pombe), a GEF subunit LAMTOR2 ( Slm4 in S. cerevisiae , Lam2 in S. pombe ) , LAMTOR3 (no S. cerevisiae ortholog identified, Lam3 in S. pombe) , LAMTOR4 (no S. cerevisiae ortholog identified, Lam4 in S. pombe), and LAMTOR5 (no S. cerevisiae or S. pombe ortholog identified).","definition_xrefs":["PMID:29199950","PMID:15989961","PMID:16732272","PMID:19748353","GOC:vw","PMID:19177150","PMID:22980980","PMID:20381137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00688":null,"SJAG_01032":null,"SJAG_03089":null,"SJAG_03928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"Ragulator complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034449","GO:0034448"],"synonyms":[{"name":"EGO complex","type":"related"},{"name":"EGO-GSE complex","type":"related"},{"name":"GSE complex","type":"related"},{"name":"GTPase-containing complex for Gap1p sorting in the endosome","type":"related"},{"name":"MAPKSP1/ROBLD3/C11orf59 complex","type":"exact"},{"name":"Rag GEF","type":"exact"}],"termid":"GO:0071986","terms_by_termid":{"GO:0071986":null}}


id: PBO:0084969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent formate dehydrogenase; may protect cells from exogenous formate","termid":"PBO:0084969"}


id: GO:1904232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aconitate hydratase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","PMID:18160053","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aconitate hydratase activity","synonyms":[{"name":"regulation of aconitase activity","type":"exact"},{"name":"regulation of cis-aconitase activity","type":"exact"},{"name":"regulation of citrate hydro-lyase activity","type":"broad"},{"name":"regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"}],"termid":"GO:1904232"}


id: PBO:0059259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL23 antisense RNA 1","termid":"PBO:0059259"}


id: GO:0031609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two inner rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome core complex, beta-subunit complex","termid":"GO:0031609"}


id: PBO:0079595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E1","termid":"PBO:0079595"}


id: GO:0003917
data:
  {"annotated_genes":["SJAG_05193","SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100496,100692],"is_not":false,"summary":null,"term":"GO:0003917"}]},"cv_name":"molecular_function","definition":"Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.","definition_xrefs":["PMID:8811192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase activity","termid":"GO:0003916"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04816":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"DNA topoisomerase type I (single strand cut, ATP-independent) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:5.99.1.2-RXN","EC:5.6.2.1"],"synonyms":[{"name":"DNA topoisomerase I activity","type":"narrow"},{"name":"deoxyribonucleate topoisomerase","type":"broad"},{"name":"nicking-closing enzyme activity","type":"related"},{"name":"omega-protein activity","type":"related"},{"name":"relaxing enzyme activity","type":"related"},{"name":"swivelase activity","type":"related"},{"name":"topoisomerase","type":"broad"},{"name":"type I DNA topoisomerase activity","type":"exact"},{"name":"type I topoisomerase activity","type":"exact"},{"name":"untwisting enzyme activity","type":"related"}],"termid":"GO:0003917","terms_by_termid":{"GO:0003917":null}}


id: GO:0106164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["GOC:vw","PMID:30601114"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106164)","termid":"GO:0106164"}


id: PBO:0081108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 2A","termid":"PBO:0081108"}


id: GO:0097152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["PMID:18231833","GOC:mtg_apoptosis","CL:0000134","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process","synonyms":[{"name":"mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:0097152"}


id: PR:Q10333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex11 gene.","definition_xrefs":["UniProtKB:Q10333","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.09","synonyms":[{"name":"Spom972h-pex11","type":"exact"}],"termid":"PR:Q10333"}


id: GO:0006659
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110729],"is_not":false,"summary":null,"term":"GO:0006659"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylserine anabolism","type":"exact"},{"name":"phosphatidylserine biosynthesis","type":"exact"},{"name":"phosphatidylserine formation","type":"exact"},{"name":"phosphatidylserine synthesis","type":"exact"}],"termid":"GO:0006659","terms_by_termid":{"GO:0006659":null}}


id: GO:0050931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell differentiation","secondary_identifiers":["GO:0043357","GO:0043358"],"synonyms":[{"name":"chromatophore differentiation","type":"exact"},{"name":"pigmented cell differentiation","type":"exact"}],"termid":"GO:0050931"}


id: GO:0015628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are secreted across the outer membrane of Gram-negative bacteria by the type II secretion system. Proteins using this pathway are first translocated across the cytoplasmic membrane via the Sec or Tat pathways.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type II secretion system","synonyms":[{"name":"protein secretion by the T2S","type":"exact"},{"name":"protein secretion by the T2SS","type":"exact"},{"name":"protein secretion by the general secretion pathway","type":"related"},{"name":"protein secretion by the general secretory pathway","type":"related"},{"name":"protein secretion by the type II protein secretion system","type":"exact"},{"name":"type II protein secretion system","type":"exact"}],"termid":"GO:0015628"}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: GO:0140430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a chromosome passenger complex localization to kinetochore.","definition_xrefs":["PMID:20739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to kinetochore","termid":"GO:1905342"},{"relation_name":"positively_regulates","term_name":"chromosome passenger complex localization to kinetochore","termid":"GO:0072356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome passenger complex localization to kinetochore","termid":"GO:0140430"}


id: GO:0072351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tricarboxylic acid biosynthetic process","synonyms":[{"name":"tricarboxylate biosynthesis","type":"exact"},{"name":"tricarboxylate biosynthetic process","type":"exact"},{"name":"tricarboxylic acid anabolism","type":"exact"},{"name":"tricarboxylic acid biosynthesis","type":"exact"},{"name":"tricarboxylic acid formation","type":"exact"},{"name":"tricarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072351"}


id: GO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the tissue.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within a tissue (obsolete GO:0048875)","termid":"GO:0048875"}


id: GO:0031170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferricrocin, a cyclic hexapeptide siderophore with the structure Gly-Ser-Gly-(N5-acetyl-N5-hydroxyornithine)3.","definition_xrefs":["GOC:mah","PMID:12828635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrichrome metabolic process","termid":"GO:0031168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ferricrocin metabolic process","synonyms":[{"name":"ferricrocin metabolism","type":"exact"}],"termid":"GO:0031170"}


id: GO:0009537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The precursor of other plastids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid","termid":"GO:0009537"}


id: GO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.8.2.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, cytochrome as acceptor","type":"exact"}],"termid":"GO:0016669"}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: GO:1901470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"negatively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syringal lignin catabolic process","synonyms":[{"name":"down regulation of S-lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin breakdown","type":"exact"},{"name":"down regulation of syringal lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin catabolism","type":"exact"},{"name":"down regulation of syringal lignin degradation","type":"exact"},{"name":"down-regulation of S-lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin breakdown","type":"exact"},{"name":"down-regulation of syringal lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin catabolism","type":"exact"},{"name":"down-regulation of syringal lignin degradation","type":"exact"},{"name":"downregulation of S-lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin breakdown","type":"exact"},{"name":"downregulation of syringal lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin catabolism","type":"exact"},{"name":"downregulation of syringal lignin degradation","type":"exact"},{"name":"inhibition of S-lignin catabolic process","type":"exact"},{"name":"inhibition of syringal lignin breakdown","type":"exact"},{"name":"inhibition of syringal lignin catabolic process","type":"narrow"},{"name":"inhibition of syringal lignin catabolism","type":"exact"},{"name":"inhibition of syringal lignin degradation","type":"exact"},{"name":"negative regulation of S-lignin catabolic process","type":"exact"},{"name":"negative regulation of syringal lignin breakdown","type":"exact"},{"name":"negative regulation of syringal lignin catabolism","type":"exact"},{"name":"negative regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901470"}


id: PBO:0076576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 4","termid":"PBO:0076576"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: PBO:0029174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029174"}


id: PBO:0072489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 18","termid":"PBO:0072489"}


id: GO:0060399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of growth hormone receptor signaling pathway","termid":"GO:0060398"},{"relation_name":"positively_regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060399"}


id: PBO:0080828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1-associated myogenesis RNA 1","termid":"PBO:0080828"}


id: PBO:0012854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 Arrest Defective","termid":"PBO:0012854"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: MOD:00092
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-asparagine amide.","definition_xrefs":["ChEBI:145898","PubMed:279902","RESID:AA0083","PubMed:2753132","PubMed:3415690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine amide","synonyms":[{"name":"(2S)-2-aminobutanediamide","type":"exact"},{"name":"AsnN","type":"exact"},{"name":"L-asparagine amide","type":"exact"},{"name":"MOD_RES Asparagine amide","type":"exact"},{"name":"amidated L-asparagine","type":"exact"},{"name":"asparaginamide","type":"exact"}],"termid":"MOD:00092"}


id: GO:0005245
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:tb","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5577213","GO:0015270","Reactome:R-HSA-265645","Reactome:R-HSA-9701055","GO:0010173","Reactome:R-HSA-9701141"],"synonyms":[{"name":"depolarization-activated calcium channel","type":"broad"},{"name":"depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"voltage gated calcium channel activity","type":"exact"},{"name":"voltage-dependent calcium channel activity","type":"exact"},{"name":"voltage-gated calcium ion channel activity","type":"exact"},{"name":"voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:0005245","terms_by_termid":{"GO:0008331":null}}


id: SO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SNPs are single base pair positions in genomic DNA at which different sequence alternatives exist in normal individuals in some population(s), wherein the least frequent variant has an abundance of 1% or greater.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNP","synonyms":[{"name":"single nucleotide polymorphism","type":"exact"}],"termid":"SO:0000694"}


id: FYPO:0002276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein degradation","synonyms":[{"name":"increased protein breakdown","type":"exact"},{"name":"increased protein catabolic process","type":"exact"},{"name":"increased protein catabolism","type":"exact"}],"termid":"FYPO:0002276"}


id: PBO:0072090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 21","termid":"PBO:0072090"}


id: PR:O14174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt20 gene.","definition_xrefs":["UniProtKB:O14174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit spt20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.10c","synonyms":[{"name":"Spom972h-spt20","type":"exact"}],"termid":"PR:O14174"}


id: GO:0030008
data:
  {"annotated_genes":["SJAG_04618","SJAG_04837","SJAG_01415","SJAG_04358","SJAG_04021","SJAG_03663","SJAG_00820","SJAG_02655","SJAG_02750","SJAG_03467","SJAG_02525","SJAG_00850"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85482,93409,84815,98604,100945,105887,95191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[95192,98605,112473,95837,105888,99454,93410,100946,85483,84816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[95193,84817,98606,105889,99816,100947,93411,101017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.","definition_xrefs":["GOC:vw","GOC:bhm","PMID:22669257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAPP complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:TRAPP_complex"],"synonyms":[{"name":"TRAPP1","type":"narrow"},{"name":"TRAPP2","type":"narrow"},{"name":"transport protein particle","type":"exact"},{"name":"transport protein particle complex","type":"exact"}],"termid":"GO:0030008","terms_by_termid":{"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: GO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O5 atom of peptidyl-hydroxylysine, forming O5-glycosyl-L-hydroxylysine; the most common form is galactosyl hydroxylysine.","definition_xrefs":["RESID:AA0153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via hydroxylysine","synonyms":[{"name":"protein amino acid O-linked glycosylation via hydroxylysine","type":"exact"}],"termid":"GO:0018241"}


id: GO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = alpha-D-glucose 1,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.10","RHEA:13377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"phosphoglucokinase activity","secondary_identifiers":["KEGG_REACTION:R00949","MetaCyc:PHOSPHOGLUCOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"ATP:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose-phosphate kinase activity","type":"related"},{"name":"phosphoglucokinase (phosphorylating)","type":"related"}],"termid":"GO:0050190"}


id: GO:1904123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A serotonin receptor signaling pathway that results in positive regulation of fatty acid beta-oxidation.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:24120942","GO_REF:0000063","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0023052","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","synonyms":[{"name":"activation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation by serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:1904123"}


id: PBO:0038483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 8","termid":"PBO:0038483"}


id: PBO:0081448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 316","termid":"PBO:0081448"}


id: GO:0051410
data:
  {"annotated_genes":["SJAG_03288","SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83566,98299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070458"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03288":null,"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"detoxification of nitrogenous compound","type":"exact"},{"name":"nitric oxide (NO) detoxification","type":"narrow"}],"termid":"GO:0051410","terms_by_termid":{"GO:0070458":null}}


id: PBO:0035764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035764"}


id: PBO:0029548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029548"}


id: PBO:0040898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 1","termid":"PBO:0040898"}


id: GO:0052180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of protease activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052180)","synonyms":[{"name":"down regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"down-regulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"downregulation of protease activity in other organism during symbiotic interaction","type":"exact"},{"name":"inhibition of protease activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of protease activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052180"}


id: GO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated threonine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphothreonine residue binding","synonyms":[{"name":"phosphothreonine binding","type":"related"}],"termid":"GO:0050816"}


id: PBO:0062308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily S member 1 pseudogene","termid":"PBO:0062308"}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: PBO:0048333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 44","termid":"PBO:0048333"}


id: GO:0106290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-cinnamate + ATP + CoA = (E)-cinnamoyl-CoA + AMP + diphosphate.","definition_xrefs":["PMID:22649270","RHEA:64788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"trans-cinnamate-CoA ligase activity","termid":"GO:0106290"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: GO:0010536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["GOC:dph","GOC:tb","PMID:9135582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of Janus kinase activity","termid":"GO:0010533"},{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of Janus kinase activity","secondary_identifiers":["GO:0010537","GO:0010535"],"synonyms":[{"name":"positive regulation of activation of JAK protein","type":"exact"},{"name":"positive regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK1 protein","type":"narrow"},{"name":"positive regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"positive regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010536"}


id: SO:0000493
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site like CACAGTG, part of a 3' D-recombination signal sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"three_prime_D_recombination_signal_sequence","termid":"SO:0000570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_D_heptamer","synonyms":[{"name":"3'D-HEPTAMER","type":"exact"},{"name":"three prime D heptamer","type":"exact"}],"termid":"SO:0000493"}


id: GO:0003793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that plays a role in the defense/immune response of an organism against infection and disease.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete defense/immunity protein activity (obsolete GO:0003793)","synonyms":[{"name":"defence/immunity protein activity","type":"exact"},{"name":"defense/immunity protein activity","type":"exact"}],"termid":"GO:0003793"}


id: GO:0034775
data:
  {"annotated_genes":["SJAG_03577","SJAG_01660","SJAG_05213","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91630],"is_not":false,"summary":null,"term":"GO:0034775"},{"annotations":[91629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[114208,92173,93154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"A process in which glutathione is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transport","termid":"GO:0034635"},{"relation_name":"is_a","term_name":"tripeptide transmembrane transport","termid":"GO:0035443"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione membrane transport","type":"exact"},{"name":"transmembrane glutathione transport","type":"exact"}],"termid":"GO:0034775","terms_by_termid":{"GO:0034775":null,"GO:0071996":null,"GO:0098709":null,"GO:0160007":null}}


id: PBO:0063141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 1","termid":"PBO:0063141"}


id: GO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which uric acid and/or purines crystalize in reflective stacks. Leucosomes are synthesized in leucophore cells and have a whitish cast.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"leucosome","synonyms":[{"name":"refractosome","type":"exact"}],"termid":"GO:0043699"}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: PBO:0071291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 14","termid":"PBO:0071291"}


id: GO:0031228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi membrane (obsolete GO:0031228)","synonyms":[{"name":"intrinsic to Golgi membrane","type":"narrow"}],"termid":"GO:0031228"}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: PBO:0090523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase, involved in tRNA wobble position thiolation Tum1","termid":"PBO:0090523"}


id: PBO:0028033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_elongated_mononucleate_vegetative_cell","termid":"PBO:0028033"}


id: GO:0048530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a fruit are generated and organized. A fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit morphogenesis","termid":"GO:0048530"}


id: PBO:0055955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 69","termid":"PBO:0055955"}


id: PBO:0079611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 H pseudogene 1","termid":"PBO:0079611"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: PBO:0059966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 11","termid":"PBO:0059966"}


id: PBO:0059792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 18","termid":"PBO:0059792"}


id: PBO:0054947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2361","termid":"PBO:0054947"}


id: GO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by glucuronidation on an amino acid oxygen atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glucuronidation","termid":"GO:0018411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein O-glucuronidation","synonyms":[{"name":"protein amino acid O-glucuronidation","type":"exact"}],"termid":"GO:0018412"}


id: PBO:0065048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 2","termid":"PBO:0065048"}


id: GO:0046079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUMP, deoxyuridine (5'-)monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009178"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUMP metabolic process","termid":"GO:0046078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dUMP catabolic process","synonyms":[{"name":"dUMP breakdown","type":"exact"},{"name":"dUMP catabolism","type":"exact"},{"name":"dUMP degradation","type":"exact"}],"termid":"GO:0046079"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: PBO:0074802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13G","termid":"PBO:0074802"}


id: PBO:0109657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type Cta5","termid":"PBO:0109657"}


id: PBO:0053004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 3","termid":"PBO:0053004"}


id: GO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during action potential","termid":"GO:0086010"},{"relation_name":"part_of","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}


id: PBO:0111967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dsl1/NZR complex secretory pathway protein RINT1 family","termid":"PBO:0111967"}


id: MOD:01635
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine removal","termid":"MOD:01635"}


id: PBO:0028571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleotide-excision_repair_during_vegetative_growth","termid":"PBO:0028571"}


id: PBO:0012549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens Rab6","termid":"PBO:0012549"}


id: PBO:0028725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament-based_movement","termid":"PBO:0028725"}


id: PBO:0088539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, inorganic phosphate/copper","termid":"PBO:0088539"}


id: GO:0160123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of nuclear lamina.","definition_xrefs":["PMID:31434876","PMID:2824113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of nuclear lamina","termid":"GO:0160123"}


id: MOD:01301
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 2-amino-3-(methylamino)butanoic acid.","definition_xrefs":["PubMed:11743741","Unimod:337#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylamine Michael addition derivatized residue","termid":"MOD:00643"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized threonine","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:01301"}


id: PBO:0003078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalase Ntp1","termid":"PBO:0003078"}


id: PBO:0053958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1265","termid":"PBO:0053958"}


id: PBO:0109224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 5","termid":"PBO:0109224"}


id: PBO:0004396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrap (predicted)","termid":"PBO:0004396"}


id: PBO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor 1","termid":"PBO:0051585"}


id: PBO:0046878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A3, pseudogene","termid":"PBO:0046878"}


id: PBO:0048087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 8","termid":"PBO:0048087"}


id: GO:1905257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA binding transcription factor activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","PMID:25116364","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of RNA binding transcription factor activity","termid":"GO:1905255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA binding transcription factor activity","synonyms":[{"name":"activation of RNA binding transcription factor activity","type":"narrow"},{"name":"up regulation of RNA binding transcription factor activity","type":"exact"},{"name":"up-regulation of RNA binding transcription factor activity","type":"exact"},{"name":"upregulation of RNA binding transcription factor activity","type":"exact"}],"termid":"GO:1905257"}


id: SO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene including C-region (and introns if present) with 5' UTR (SO:0000204) and 3' UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_segment","termid":"SO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_gene_segment","synonyms":[{"name":"C gene","type":"exact"},{"name":"C_GENE","type":"exact"},{"name":"INSDC_feature:C_region","type":"exact"},{"name":"constant gene","type":"exact"}],"termid":"SO:0000478"}


id: PBO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A","termid":"PBO:0090178"}


id: PR:Q10192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.07","secondary_identifiers":["UniProtKB:Q10192"],"synonyms":[{"name":"Spom972h-RPL18","type":"exact"}],"termid":"PR:Q10192"}


id: RO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serially_homologous_to","termid":"RO:0002159"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: FYPO:0005559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"thick stable microtubule bundle","synonyms":[{"name":"increased stable microtubule bundle thickness","type":"exact"},{"name":"thick Q-MT bundles","type":"exact"},{"name":"thick quiescent cell MT bundle","type":"exact"},{"name":"thick quiescent cell microtubule bundle","type":"exact"},{"name":"thick stable microtubule array","type":"related"},{"name":"thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005559"}


id: GO:0008735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (E)-4-(trimethylammonio)but-2-enoyl-CoA + L-carnitine = (E)-4-(trimethylammonio)but-2-enoate + L-carnitinyl-CoA and 4-trimethylammoniobutanoyl-CoA + L-carnitine = 4-trimethylammoniobutanoate + L-carnitinyl-CoA.","definition_xrefs":["PMID:7815937","PMID:8188598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"L-carnitine CoA-transferase activity","synonyms":[{"name":"L-carnitine dehydratase activity","type":"exact"},{"name":"L-carnitine hydro-lyase [4-(trimethylammonio)but-2-enoate-forming]","type":"related"},{"name":"L-carnitine hydro-lyase activity","type":"related"}],"termid":"GO:0008735"}


id: GO:0033861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD(P)H oxidase activity","synonyms":[{"name":"down regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"down-regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"downregulation of NAD(P)H oxidase activity","type":"exact"},{"name":"inhibition of NAD(P)H oxidase activity","type":"narrow"}],"termid":"GO:0033861"}


id: GO:1990742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular vesicle released from the plasma membrane and ranging in size from about 100 nm to 1000 nm.","definition_xrefs":["GOC:vesicles","Wikipedia:Microvesicles","PMID:22418571","PMID:24009894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"microvesicle","synonyms":[{"name":"ectosome","type":"exact"},{"name":"extracellular microvesicle","type":"exact"},{"name":"shedding vesicle","type":"broad"}],"termid":"GO:1990742"}


id: PBO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 137, pseudogene","termid":"PBO:0044428"}


id: GO:0021649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vestibulocochlear nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"vestibulocochlear nerve structural organisation","type":"exact"}],"termid":"GO:0021649"}


id: PBO:0046413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial mitogen","termid":"PBO:0046413"}


id: GO:1900028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"negatively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ruffle assembly","synonyms":[{"name":"down regulation of membrane ruffle formation","type":"exact"},{"name":"down regulation of membrane ruffling","type":"exact"},{"name":"down regulation of ruffle assembly","type":"related"},{"name":"negative regulation of membrane ruffle formation","type":"exact"},{"name":"negative regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900028"}


id: GO:2000200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000200"}


id: RO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kills","termid":"RO:0002626"}


id: FYPO:0005166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is normal (i.e. indistinguishable from wild type). Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PMID:17304223","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"normal replication foci dynamics","type":"related"},{"name":"normal replication focus organization","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"normal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"normal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005166"}


id: PBO:0066385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REC114 meiotic recombination protein","termid":"PBO:0066385"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: GO:0072167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"part_of","term_name":"mesonephric tubule formation","termid":"GO:0072172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric tubule identity","termid":"GO:0072167"}


id: GO:2000767
data:
  {"annotated_genes":["SJAG_02723","SJAG_01047","SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84725,102716,113158],"is_not":false,"summary":null,"term":"GO:2000767"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytoplasmic translation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation","termid":"GO:2000765"},{"relation_name":"positively_regulates","term_name":"cytoplasmic translation","termid":"GO:0002181"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01047":null,"SJAG_02043":null,"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cytoplasmic translation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000767","terms_by_termid":{"GO:2000767":null}}


id: PBO:0067683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 870, pseudogene","termid":"PBO:0067683"}


id: GO:0007374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a cup-shaped invagination at the posterior end of the embryo, bringing the posterior midgut and hindgut primordia into the interior.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior midgut invagination","termid":"GO:0007374"}


id: PBO:0053710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 919","termid":"PBO:0053710"}


id: PR:O60101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglycerate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.04c","secondary_identifiers":["UniProtKB:O60101"],"synonyms":[{"name":"SPBC14F5.04c","type":"related"},{"name":"Spom972h-pgk","type":"exact"}],"termid":"PR:O60101"}


id: PBO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldose reductase ARK13 family YakC","termid":"PBO:0002430"}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_02750","SJAG_04219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111272,112474],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: PBO:0079867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk zinc finger","termid":"PBO:0079867"}


id: GO:0071637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of monocyte chemotactic protein-1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"monocyte chemotactic protein-1 production","termid":"GO:0071605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of monocyte chemotactic protein-1 production","synonyms":[{"name":"regulation of CCL2 production","type":"exact"},{"name":"regulation of MCP-1 production","type":"exact"}],"termid":"GO:0071637"}


id: PBO:0081631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 560","termid":"PBO:0081631"}


id: PBO:0050434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 5","termid":"PBO:0050434"}


id: PBO:0045477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drosha ribonuclease III","termid":"PBO:0045477"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: GO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion sodium and calcium ions in which influx of sodium ions to the cytosol drives the efflux of calcium ions from the cell.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:calcium exchange (obsolete GO:0030181)","synonyms":[{"name":"sodium:calcium exchange","type":"exact"}],"termid":"GO:0030181"}


id: PBO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A2","termid":"PBO:0050474"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: PBO:0074201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 11","termid":"PBO:0074201"}


id: GO:0032617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of interleukin-14 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 production (obsolete GO:0032617)","synonyms":[{"name":"IL-14 production","type":"exact"},{"name":"interleukin-14 biosynthetic process","type":"narrow"},{"name":"interleukin-14 secretion","type":"narrow"}],"termid":"GO:0032617"}


id: GO:1990741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the non-selective, energy-independent passage of cations across a lipid bilayer down a concentration gradient.","definition_xrefs":["Wikipedia:Ion_channel#Classification_by_type_of_ions","GOC:pr","ISBN:0878937420"],"gene_count":0,"genotype_count":0,"name":"obsolete non-selective cation channel activity (obsolete GO:1990741)","synonyms":[{"name":"nonselective cation channel activity","type":"exact"}],"termid":"GO:1990741"}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.7"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: PBO:0040587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 2","termid":"PBO:0040587"}


id: PBO:0028254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_G2_phase","termid":"PBO:0028254"}


id: PBO:0084307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter of the mitochondrial carrier family; mediates Fe2+ transport across the inner mitochondrial membrane; active under low-iron conditions; may transport other cations; protein abundance increases in response to DNA replication stress; MRS4 has a paralog, MRS3, that arose from the whole genome duplication","termid":"PBO:0084307"}


id: PBO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox pseudogene 3","termid":"PBO:0060481"}


id: PR:O60119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scs2 gene.","definition_xrefs":["UniProtKB:O60119","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle-associated membrane protein-associated protein C16G5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.05c","synonyms":[{"name":"Spom972h-scs2","type":"exact"},{"name":"VAMP-associated protein C16G5.05c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"VAP homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60119"}


id: PBO:0057341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-2","termid":"PBO:0057341"}


id: GO:0019065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any receptor-mediated endocytosis that is involved in the uptake of a virus into a host cell; successive instances of virus endocytosis result in the accumulation of virus particles within the cell.","definition_xrefs":["GOC:jl","ISBN:0781702534","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"endocytosis involved in viral entry into host cell","termid":"GO:0075509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor-mediated endocytosis of virus by host cell","synonyms":[{"name":"receptor mediated endocytosis by host of virus particle","type":"exact"},{"name":"receptor mediated endocytosis of virus by host","type":"exact"},{"name":"receptor mediated endocytosis of virus particle by host","type":"exact"},{"name":"receptor-mediated endocytosis of virus by host","type":"exact"},{"name":"viral entry into host cell via receptor-mediated endocytosis","type":"related"},{"name":"viral receptor mediated endocytosis","type":"exact"},{"name":"virus receptor-mediated endocytosis by host","type":"exact"}],"termid":"GO:0019065"}


id: PATO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's being altered or spoiled in color.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discolored","termid":"PATO:0000331"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: PBO:0054365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1758","termid":"PBO:0054365"}


id: GO:1903406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:mr","PMID:8160880","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"regulation of Na+,K+ pump","type":"related"},{"name":"regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"regulation of Na,K-pump","type":"related"},{"name":"regulation of sodium pump","type":"broad"},{"name":"regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"regulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903406"}


id: FYPO:0005916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at tRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in tRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at tRNA genes","type":"exact"}],"termid":"FYPO:0005916"}


id: GO:0070689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound propionate.","definition_xrefs":["MetaCyc:PWY-5437","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629","GO:0006520"],"is_obsolete":false,"name":"L-threonine catabolic process to propionate","synonyms":[{"name":"L-threonine breakdown to propionate","type":"exact"},{"name":"L-threonine catabolism to propionate","type":"exact"},{"name":"L-threonine degradation to propionate","type":"exact"},{"name":"threonine catabolic process to propionate","type":"broad"}],"termid":"GO:0070689"}


id: PBO:0029089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_spheroid_cell","termid":"PBO:0029089"}


id: PBO:0034701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4 (predicted)","termid":"PBO:0034701"}


id: PBO:0087574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 19S regulatory particle of the 26S proteasome lid; acts as a ubiquitin receptor for the proteasome; null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; protein abundance increases in response to DNA replication stress","termid":"PBO:0087574"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:19100238","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: PBO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB binding protein","termid":"PBO:0043878"}


id: PBO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 7","termid":"PBO:0042673"}


id: PBO:0004380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt7","termid":"PBO:0004380"}


id: GO:0008660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanate + NH4.","definition_xrefs":["RHEA:16933","EC:3.5.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase activity","secondary_identifiers":["MetaCyc:4.1.99.4-RXN","GO:0018806","KEGG_REACTION:R00997","UM-BBD_reactionID:r0357"],"synonyms":[{"name":"1-aminocyclopropane carboxylic acid deaminase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate aminohydrolase (isomerizing)","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate endolyase (deaminating) activity","type":"related"},{"name":"ACC deaminase activity","type":"related"}],"termid":"GO:0008660"}


id: PBO:0084644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule effector required for tubulin heterodimer formation; binds alpha-tubulin, required for normal microtubule function, null mutant exhibits cold-sensitive microtubules and sensitivity to benomyl","termid":"PBO:0084644"}


id: GO:2000240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA export from nucleus","termid":"GO:0046833"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of tRNA export from nucleus","termid":"GO:2000238"},{"relation_name":"positively_regulates","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA export from nucleus","synonyms":[{"name":"positive regulation of tRNA export from cell nucleus","type":"exact"},{"name":"positive regulation of tRNA export out of nucleus","type":"exact"},{"name":"positive regulation of tRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of tRNA-nucleus export","type":"exact"}],"termid":"GO:2000240"}


id: GO:1901980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["PMID:23449501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inward rectifier potassium channel activity","termid":"GO:1901979"},{"relation_name":"is_a","term_name":"positive regulation of voltage-gated potassium channel activity","termid":"GO:1903818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inward rectifier potassium channel activity","synonyms":[{"name":"activation of Kir channel activity","type":"exact"},{"name":"activation of inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of Kir channel activity","type":"exact"},{"name":"up regulation of Kir channel activity","type":"exact"},{"name":"up regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of Kir channel activity","type":"exact"},{"name":"up-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of Kir channel activity","type":"exact"},{"name":"upregulation of inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1901980"}


id: PBO:0038684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 3","termid":"PBO:0038684"}


id: PBO:0031038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_organization","termid":"PBO:0031038"}


id: PBO:0070929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 37","termid":"PBO:0070929"}


id: PBO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 8","termid":"PBO:0046215"}


id: GO:2000753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucosylceramide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of glucosylceramide catabolic process","termid":"GO:2000752"},{"relation_name":"positively_regulates","term_name":"glucosylceramide catabolic process","termid":"GO:0006680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucosylceramide catabolic process","synonyms":[{"name":"positive regulation of glucosylceramide breakdown","type":"exact"},{"name":"positive regulation of glucosylceramide catabolism","type":"exact"},{"name":"positive regulation of glucosylceramide degradation","type":"exact"}],"termid":"GO:2000753"}


id: GO:0030029
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id: PBO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70B","termid":"PBO:0050987"}


id: GO:1901791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["MetaCyc:1.13.11.16-RXN","UniPathway:UPA00836","GOC:yaf","MetaCyc:HCAMHPDEG-PWY","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","termid":"GO:1901790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(2,3-dihydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901791"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: GO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate.","definition_xrefs":["EC:6.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0009975","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"RNA-3'-phosphate cyclase activity","secondary_identifiers":["MetaCyc:RNA-3-PHOSPHATE-CYCLASE-RXN","RHEA:23976"],"synonyms":[{"name":"RNA 3'-terminal phosphate cyclase activity","type":"related"},{"name":"RNA cyclase activity","type":"related"},{"name":"RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)","type":"related"}],"termid":"GO:0003963"}


id: GO:0050284
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id: GO:0001541
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id: GO:0047255
data:
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id: PBO:0030636
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id: GO:0098631
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id: PBO:0087794
data:
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id: GO:0051799
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id: GO:0051668
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id: GO:0015276
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id: GO:0050901
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id: GO:0048868
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id: PBO:0062789
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id: GO:0070472
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id: GO:0102874
data:
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id: GO:0008494
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id: GO:0046463
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id: PBO:0031518
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id: PBO:0071796
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id: PR:Q10213
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srs2 gene.","definition_xrefs":["UniProtKB:Q10213","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase srs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.05","synonyms":[{"name":"Spom972h-srs2","type":"exact"}],"termid":"PR:Q10213"}


id: GO:0016962
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor-associated protein activity (obsolete GO:0016962)","synonyms":[{"name":"receptor-associated protein activity","type":"exact"}],"termid":"GO:0016962"}


id: PBO:0070811
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 41","termid":"PBO:0070811"}


id: GO:0035303
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dephosphorylation","termid":"GO:0035303"}


id: GO:0009767
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring as part of photosynthesis, in which light provides the energy for a series of electron carriers to operate together to transfer electrons and generate a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:mtg_electron_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transport chain","termid":"GO:0022900"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic electron transport chain","secondary_identifiers":["GO:0009774","GO:0009775","GO:0009776"],"synonyms":[{"name":"electron carrier, chlorophyll electron transport system","type":"exact"},{"name":"photosynthetic electron transport in cytochrome b6/f","type":"narrow"},{"name":"photosynthetic electron transport in plastocyanin","type":"narrow"},{"name":"photosynthetic electron transport in plastoquinone","type":"narrow"}],"termid":"GO:0009767"}


id: MOD:01678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively coverts L-lysine to N6-carbamoyl-L-lysine.","definition_xrefs":["PubMed:12203680","Unimod:5#K","DeltaMass:56","OMSSA:31","PubMed:10978403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carbamoyl-L-lysine","synonyms":[{"name":"2-amino-6-ureido-hexanoic acid","type":"exact"},{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"related"},{"name":"N6-(aminocarbonyl)-L-lysine","type":"exact"},{"name":"N6CbmLys","type":"exact"},{"name":"carbamylk","type":"exact"},{"name":"homocitrulline","type":"exact"}],"termid":"MOD:01678"}


id: GO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.153","RHEA:21292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity","secondary_identifiers":["Reactome:R-HSA-1226014","Reactome:R-HSA-2730870","Reactome:R-HSA-1306979","Reactome:R-HSA-5654705","Reactome:R-HSA-5654697","Reactome:R-HSA-9603445","Reactome:R-HSA-198266","Reactome:R-HSA-392300","Reactome:R-HSA-5654701","Reactome:R-HSA-1839091","Reactome:R-HSA-2076220","Reactome:R-HSA-1250462","Reactome:R-HSA-9672177","Reactome:R-HSA-9664664","Reactome:R-HSA-9021627","Reactome:R-HSA-186800","Reactome:R-HSA-5654692","Reactome:R-HSA-9664940","Reactome:R-HSA-5654714","Reactome:R-HSA-2394007","KEGG_REACTION:R04545","Reactome:R-HSA-5637801","Reactome:R-HSA-1839107","Reactome:R-HSA-5654709","Reactome:R-HSA-5655290","Reactome:R-HSA-202365","Reactome:R-HSA-437162","Reactome:R-HSA-8852019","MetaCyc:2.7.1.153-RXN","Reactome:R-HSA-1676048","Reactome:R-HSA-5654690","Reactome:R-HSA-1306957","Reactome:R-HSA-201510","Reactome:R-HSA-5218819","Reactome:R-HSA-177939","Reactome:R-HSA-5655235","Reactome:R-HSA-1250370","Reactome:R-HSA-5655289","Reactome:R-HSA-5654717","Reactome:R-HSA-5655323","Reactome:R-HSA-9665407","Reactome:R-HSA-9712084","Reactome:R-HSA-2029271","Reactome:R-HSA-9672162","Reactome:R-HSA-2316434","Reactome:R-HSA-2424480","Reactome:R-HSA-389158"],"synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase activity","type":"exact"},{"name":"type I phosphoinositide 3-kinase activity","type":"narrow"}],"termid":"GO:0046934"}


id: PBO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1 (predicted)","termid":"PBO:0001241"}


id: PBO:0011148
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Chinese Hamster Ovary (CHO) L-G1PT","termid":"PBO:0011148"}


id: PBO:0034389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_directly_develop_into","termid":"PBO:0034389"}


id: PBO:0059510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block III","termid":"PBO:0059510"}


id: PBO:0083846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hMtr3p (EXOSC6)","termid":"PBO:0083846"}


id: PATO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000399 life span value (obsolete PATO:0000399)","termid":"PATO:0000399"}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: PBO:0060053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 41","termid":"PBO:0060053"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: PBO:0061986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 6","termid":"PBO:0061986"}


id: GO:1903844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to transforming growth factor beta stimulus.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","PMID:22269326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"regulation of cellular response to TGF-beta stimulus","type":"exact"},{"name":"regulation of cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:1903844"}


id: PBO:0091458
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YNG2","termid":"PBO:0091458"}


id: PR:Q9UUC8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L43, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L51, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.12","secondary_identifiers":["UniProtKB:Q9UUC8"],"synonyms":[{"name":"Spom972h-MRPL43","type":"exact"}],"termid":"PR:Q9UUC8"}


id: PBO:0088663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle protein Svp26","termid":"PBO:0088663"}


id: PBO:0060031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 19","termid":"PBO:0060031"}


id: GO:0018480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate semialdehyde + H2O + NAD+ = 5-carboxymethyl-2-hydroxymuconate + NADH + H+.","definition_xrefs":["EC:1.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:15681","UM-BBD_reactionID:r0365","MetaCyc:CHMS-DEHYDROGENASE-RXN"],"synonyms":[{"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"carboxymethylhydroxymuconic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018480"}


id: GO:0001785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity.","definition_xrefs":["PMID:12878180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin J receptor activity","synonyms":[{"name":"PGJ receptor activity","type":"related"},{"name":"PGJ(2) receptor activity","type":"exact"}],"termid":"GO:0001785"}


id: PATO:0002290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic/hypoplastic","termid":"PATO:0002290"}


id: GO:1901871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecgonone methyl ester.","definition_xrefs":["PMID:22665766","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ecgonone methyl ester metabolic process","termid":"GO:1901870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"ecgonone methyl ester catabolic process","synonyms":[{"name":"ecgonone methyl ester breakdown","type":"exact"},{"name":"ecgonone methyl ester catabolism","type":"exact"},{"name":"ecgonone methyl ester degradation","type":"exact"}],"termid":"GO:1901871"}


id: PBO:0044968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase X-linked","termid":"PBO:0044968"}


id: GO:0097071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit.","definition_xrefs":["PMID:20043992","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor complex","synonyms":[{"name":"IRF complex","type":"exact"}],"termid":"GO:0097071"}


id: PBO:0071012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 14","termid":"PBO:0071012"}


id: PBO:0017971
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc18 protein half-life 5 minutes","termid":"PBO:0017971"}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000653","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: GO:0022893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the low-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"low-affinity tryptophan transmembrane transporter activity","secondary_identifiers":["GO:0015510"],"synonyms":[{"name":"low-affinity tryptophan permease activity","type":"related"}],"termid":"GO:0022893"}


id: GO:0048864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stem cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to its specific fate.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell development","termid":"GO:0048864"}


id: FYPO:0007788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of macroautophagy is increased.","definition_xrefs":["PMID:17121544","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased macroautophagy","termid":"FYPO:0000384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased macroautophagy during vegetative growth","synonyms":[{"name":"increased macroautophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007788"}


