# terms

id: GO:0033990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-acetyl-L-2,4-diaminobutyrate = ectoine + H2O.","definition_xrefs":["EC:4.2.1.108","RHEA:17281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ectoine synthase activity","secondary_identifiers":["KEGG_REACTION:R06979","MetaCyc:R103-RXN"],"synonyms":[{"name":"4-N-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"},{"name":"EctC","type":"related"},{"name":"L-ectoine synthase activity","type":"related"},{"name":"N-acetyldiaminobutanoate dehydratase activity","type":"related"},{"name":"N-acetyldiaminobutyrate dehydratase activity","type":"related"},{"name":"N4-acetyl-L-2,4-diaminobutanoate hydro-lyase (L-ectoine-forming) activity","type":"related"}],"termid":"GO:0033990"}


id: PBO:0087166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitment by the preinitiation complex","termid":"PBO:0087166"}


id: PBO:0039251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A1","termid":"PBO:0039251"}


id: PR:Q9UTL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A co-chaperone protein HscB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J-type co-chaperone jac1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.08","secondary_identifiers":["UniProtKB:Q9UTL6"],"synonyms":[{"name":"J-type accessory chaperone 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hscB","type":"exact"}],"termid":"PR:Q9UTL6"}


id: MOD:01829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxymethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:18688235","PubMed:17689096"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxymethyl-L-cysteine","termid":"MOD:01061"},{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carboxymethyl-L-cysteine sulfoxide","synonyms":[{"name":"CmCO","type":"exact"}],"termid":"MOD:01829"}


id: GO:0141169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that involves a DNA glycosylase that directly excises 5-methylcytosine (5-meC) to initiate its replacement with unmethylated cytosine through base excision repair. This pathway is known to occur in plants. In addition to CG sites, plants also methylate cytosines within CHH and CNG sequences.","definition_xrefs":["PMID:36478523","PMID:21862972","PMID:31546611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","type":"related"}],"termid":"GO:0141169"}


id: PBO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.32","termid":"PBO:0004630"}


id: PBO:0049032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 19","termid":"PBO:0049032"}


id: GO:0009969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xyloglucan, the cross-linking glycan composed of (1->4)-beta-D glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xyloglucan biosynthetic process","synonyms":[{"name":"xyloglucan anabolism","type":"exact"},{"name":"xyloglucan biosynthesis","type":"exact"},{"name":"xyloglucan formation","type":"exact"},{"name":"xyloglucan synthesis","type":"exact"}],"termid":"GO:0009969"}


id: GO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction","synonyms":[{"name":"down regulation of T cell tolerance induction","type":"exact"},{"name":"down-regulation of T cell tolerance induction","type":"exact"},{"name":"downregulation of T cell tolerance induction","type":"exact"},{"name":"inhibition of T cell tolerance induction","type":"narrow"},{"name":"negative regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of T-cell tolerance induction","type":"exact"},{"name":"negative regulation of T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002665"}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: PBO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 17","termid":"PBO:0050315"}


id: GO:0046119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 7-methylguanosine, a modified nucleoside that forms a cap at the 5'-terminus of eukaryotic mRNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"7-methylguanosine metabolic process","termid":"GO:0008618"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"7-methylguanosine catabolic process","synonyms":[{"name":"7-methylguanosine breakdown","type":"exact"},{"name":"7-methylguanosine catabolism","type":"exact"},{"name":"7-methylguanosine degradation","type":"exact"}],"termid":"GO:0046119"}


id: PBO:0046495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERGIC and golgi 2","termid":"PBO:0046495"}


id: FYPO:0001772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased tRNA methyltransferase activity","synonyms":[{"name":"reduced tRNA methyltransferase activity","type":"exact"}],"termid":"FYPO:0001772"}


id: GO:0120020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes cholesterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:24220498","GOC:krc","PMID:25797198","PMID:20823909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"cholesterol transfer activity","secondary_identifiers":["Reactome:R-HSA-8951850","Reactome:R-HSA-266082","Reactome:R-HSA-5682111","Reactome:R-HSA-265545","Reactome:R-HSA-216723","GO:0017127","Reactome:R-HSA-1454928","Reactome:R-HSA-265443"],"synonyms":[{"name":"cholesterol carrier activity","type":"exact"},{"name":"cholesterol transporter activity","type":"broad"},{"name":"intermembrane cholesterol transfer activity","type":"narrow"}],"termid":"GO:0120020"}


id: PBO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035814"}


id: GO:0061362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000115"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"},{"relation_name":"negatively_regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061362"}


id: GO:0034710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an inhibin complex, a dimer of one inhibin-alpha subunit and one inhibin-beta subunit.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inhibin complex binding","termid":"GO:0034710"}


id: PBO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gypsy retrotransposon integrase 1","termid":"PBO:0048618"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: PBO:0070123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 37 pseudogene","termid":"PBO:0070123"}


id: PBO:0057661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1253","termid":"PBO:0057661"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: PBO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_acquisition_of_features_of","termid":"PBO:0012539"}


id: PBO:0082029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; involved with Gas4p in spore wall assembly; has similarity to Gas1p","termid":"PBO:0082029"}


id: GO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of single stranded viral RNA replication via double stranded DNA intermediate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral genome replication","termid":"GO:0045071"},{"relation_name":"is_a","term_name":"regulation of single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0045091"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"single stranded viral RNA replication via double stranded DNA intermediate","termid":"GO:0039692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single stranded viral RNA replication via double stranded DNA intermediate","synonyms":[{"name":"down regulation of retroviral genome replication","type":"exact"},{"name":"down-regulation of retroviral genome replication","type":"exact"},{"name":"downregulation of retroviral genome replication","type":"exact"},{"name":"inhibition of retroviral genome replication","type":"narrow"},{"name":"negative regulation of retroviral genome replication","type":"exact"},{"name":"regulation of retroviral genome replication","type":"related"}],"termid":"GO:0045869"}


id: FYPO:0006310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-3'-diphospho-5'-guanosine diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}


id: PBO:0040905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 9","termid":"PBO:0040905"}


id: PBO:0081784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF710 antisense RNA 1","termid":"PBO:0081784"}


id: GO:0052512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of hormone or growth regulator levels in symbiont (obsolete GO:0052512)","synonyms":[{"name":"positive modulation of hormone or growth regulator levels in symbiont","type":"exact"},{"name":"positive regulation by organism of hormone or growth regulator levels in symbiont","type":"exact"}],"termid":"GO:0052512"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: PBO:0004515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein Regulated via Splicing","termid":"PBO:0004515"}


id: GO:0016344
data:
  {"annotated_genes":["SJAG_01805","SJAG_03540","SJAG_01613","SJAG_02761","SJAG_00794","SJAG_04076","SJAG_03683","SJAG_02814","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114152,91412,95305,98518,105209,89900,114672,96461,111972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome movement towards spindle pole","termid":"GO:0051305"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179","GO:0140013"],"is_obsolete":false,"name":"meiotic chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome migration to spindle pole during meiosis","type":"exact"},{"name":"chromosome movement towards spindle pole during meiosis","type":"exact"},{"name":"meiotic chromosome movement","type":"broad"},{"name":"meiotic chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0016344","terms_by_termid":{"GO:1990571":null}}


id: GO:0070695
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of AKTIP/FTS, FAM160A2/p107FHIP, and one or more members of the Hook family of proteins, HOOK1, HOOK2, and HOOK3. The complex is thought to promote vesicle trafficking and/or fusion, and associates with the homotypic vesicular sorting complex (the HOPS complex).","definition_xrefs":["PMID:18799622","GOC:ab","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"FHF complex","termid":"GO:0070695"}


id: GO:0005552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete polyubiquitin (obsolete GO:0005552)","synonyms":[{"name":"polyubiquitin","type":"exact"}],"termid":"GO:0005552"}


id: PBO:0028943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_(1->3)-beta-D-glucan_level_at_cell_tip","termid":"PBO:0028943"}


id: GO:0009211
data:
  {"annotated_genes":["SJAG_04627","SJAG_04657","SJAG_00885","SJAG_04665","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85515,88540,114037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[95075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009211","terms_by_termid":{"GO:0006235":null,"GO:0009212":null,"GO:0046081":null}}


id: FYPO:0003843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division during which chromosomes segregate unequally, and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0000002"],"is_obsolete":false,"name":"inviable following spore germination, single cell division, unequal chromosome segregation","synonyms":[{"name":"inviable germinated spore, single cell division, unequal chromosome segregation","type":"exact"},{"name":"lethal; following spore germination, single cell division, unequal chromosome segregation","type":"exact"}],"termid":"FYPO:0003843"}


id: PBO:0086655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; haploid deletion mutant exhibits synthetic phenotype with alpha-synuclein; SWAT-GFP fusion protein localizes to the endoplasmic reticulum while mCherry fusion protein localizes to both the endoplasmic reticulum and vacuole","termid":"PBO:0086655"}


id: PBO:0046288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 5","termid":"PBO:0046288"}


id: PBO:0087545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNAPII-associated chromatin remodeling Paf1 complex; regulates gene expression by directing cotranscriptional histone modification, influences transcription and chromatin structure through several independent functional domains; directly or indirectly regulates DNA-binding properties of Spt15p and relative activities of different TATA elements; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay","termid":"PBO:0087545"}


id: GO:0018545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.","definition_xrefs":["UM-BBD_enzymeID:e0346"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H nitroreductase activity (obsolete GO:0018545)","termid":"GO:0018545"}


id: GO:0034425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the etioplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast envelope","termid":"GO:0034425"}


id: PBO:0087094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L9A; homologous to mammalian ribosomal protein L9 and bacterial L6; RPL9A has a paralog, RPL9B, that arose from a single-locus duplication","termid":"PBO:0087094"}


id: GO:0005941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Used as a holding place for cellular components whose precise localization is, as yet, unknown, or has not been determined by GO (the latter is the major reason for nodes to have this parent); this term should not be used for annotation of gene products.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete unlocalized protein complex (obsolete GO:0005941)","synonyms":[{"name":"unlocalized protein complex","type":"exact"}],"termid":"GO:0005941"}


id: GO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric tubule over time, from its initial formation to the mature structure. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule development","termid":"GO:0072170"}


id: FYPO:0000460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic centromeric sister chromatid cohesion","termid":"FYPO:0000459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"decreased centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"decreased centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"decreased mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"decreased sister chromatid cohesion at centromere during mitosis","type":"exact"},{"name":"reduced mitotic centromeric sister chromatid cohesion","type":"exact"}],"termid":"FYPO:0000460"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0054969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2383","termid":"PBO:0054969"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: SO:0001164
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence CGGACGT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPE1_motif","synonyms":[{"name":"DMp5","type":"exact"},{"name":"DPE1 motif","type":"exact"},{"name":"directional motif 5","type":"exact"},{"name":"directional promoter motif 5","type":"related"}],"termid":"SO:0001164"}


id: PBO:0052354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5A","termid":"PBO:0052354"}


id: PBO:0077872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM4 pseudogene 3","termid":"PBO:0077872"}


id: PBO:0066423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention in endoplasmic reticulum sorting receptor 1","termid":"PBO:0066423"}


id: PBO:0041953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 1A","termid":"PBO:0041953"}


id: FYPO:0002788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology during vegetative growth","termid":"FYPO:0000368"},{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"small vacuoles during vegetative growth","synonyms":[{"name":"decreased vacuole size during vegetative growth","type":"exact"},{"name":"reduced vacuole size during vegetative growth","type":"exact"},{"name":"small vacuoles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002788"}


id: GO:0043455
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolism","type":"exact"}],"termid":"GO:0043455","terms_by_termid":{"GO:1905569":null}}


id: PBO:0028534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized,_misoriented_septum","termid":"PBO:0028534"}


id: PBO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping exoribonuclease","termid":"PBO:0045660"}


id: PBO:0086308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with NADP(H) oxidoreductase activity; transcription is regulated by Stb5p in response to NADPH depletion induced by diamide; promoter contains a putative Stb5p binding site; protein abundance increases in response to DNA replication stress","termid":"PBO:0086308"}


id: PBO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger containing protein Phf1","termid":"PBO:0005142"}


id: PBO:0074166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G3","termid":"PBO:0074166"}


id: GO:0120033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"negatively_regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"}


id: FYPO:0006275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pyknosis, the form of chromatin condensation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["GO:0030263","PMID:18653539","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased pyknosis during stationary phase","synonyms":[{"name":"increased apoptotic chromosome condensation during stationary phase","type":"exact"}],"termid":"FYPO:0006275"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","GOC:jsg","RESID:AA0387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-threonine octanoylation","secondary_identifiers":["RESID:AA0386"],"termid":"GO:0051368"}


id: PBO:0001243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orp3 (predicted)","termid":"PBO:0001243"}


id: GO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0781735149","GOC:add","PMID:15199967","GO_REF:0000022","PMID:16177805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of innate immune response","secondary_identifiers":["GO:0002219"],"termid":"GO:0002218"}


id: PBO:0075682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1 pseudogene 1","termid":"PBO:0075682"}


id: PBO:0017022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0017022"}


id: PR:Q10289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fas2 gene.","definition_xrefs":["UniProtKB:Q10289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.11c","synonyms":[{"name":"Spom972h-fas2","type":"exact"},{"name":"p190/210 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10289"}


id: GO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell volume","synonyms":[{"name":"RVD","type":"related"},{"name":"cell regulatory volume decrease","type":"related"}],"termid":"GO:0045794"}


id: PBO:0085934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; protein identified via enrichment-based proteogenomics; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0085934"}


id: PBO:0003259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17 (predicted)","termid":"PBO:0003259"}


id: GO:0050064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin + UDP-alpha-D-glucuronate = luteolin 7-O-beta-D-glucosiduronate + UDP.","definition_xrefs":["EC:2.4.1.189","RHEA:10568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"luteolin 7-O-glucuronosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03589","MetaCyc:LUTEOLIN-7-O-GLUCORONOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"LGT","type":"related"},{"name":"UDP-glucuronate:luteolin 7-O-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:luteolin 7-O-glucuronosyltransferase activity","type":"related"},{"name":"luteolin 7-O-glucoronosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucuronate-luteolin 7-O-glucuronosyltransferase activity","type":"related"}],"termid":"GO:0050064"}


id: GO:0046920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->3) linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-(1->3)-fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9605644","Reactome:R-HSA-9603984","Reactome:R-HSA-9605609","Reactome:R-HSA-9605682"],"synonyms":[{"name":"alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:0046920"}


id: PBO:0041360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 3","termid":"PBO:0041360"}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: GO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"is_a","term_name":"positive regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045938"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"positive regulation of non-REM sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"}],"termid":"GO:0046010"}


id: GO:0003383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction","termid":"GO:0003383"}


id: PBO:0055938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 45","termid":"PBO:0055938"}


id: FYPO:0002509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased protein palmitoylation","termid":"FYPO:0002509"}


id: GO:0018831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-chloro-1,2,4-trihydroxybenzene = Cl- + H+ + 2-hydroxy-1,4-benzoquinone.","definition_xrefs":["UM-BBD_reactionID:r0666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"5-chloro-1,2,4-trihydroxybenzene dechlorinase activity","secondary_identifiers":["EC:4.5.1.-"],"termid":"GO:0018831"}


id: PBO:0087564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in DNA repair, replication fork stability, and joint molecule formation/resolution during meiotic recombination; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); helix-hairpin-helix protein; phosphorylation of non-catalytic subunit Mms4p by Cdc28p and Cdcp during mitotic cell cycle activates function of Mms4p-Mus81p","termid":"PBO:0087564"}


id: FYPO:0005723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}


id: PBO:0043965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin lambda 1","termid":"PBO:0043965"}


id: GO:0070903
data:
  {"annotated_genes":["SJAG_04113","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90366,112998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The addition a sulfur atom to a nucleotide in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA thio-modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070903","terms_by_termid":{"GO:1990799":null}}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: PBO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 11","termid":"PBO:0075155"}


id: PR:Q10282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.07","synonyms":[{"name":"Spom972h-git5","type":"exact"}],"termid":"PR:Q10282"}


id: PBO:0084270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport","termid":"PBO:0084270"}


id: PBO:0078609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 63","termid":"PBO:0078609"}


id: GO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an early endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"early endosome lumen","termid":"GO:0031905"}


id: PBO:0110302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1.2","termid":"PBO:0110302"}


id: GO:0006045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylglucosamine metabolic process","termid":"GO:0006044"},{"relation_name":"is_a","term_name":"glucosamine-containing compound biosynthetic process","termid":"GO:1901073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine biosynthetic process","synonyms":[{"name":"N-acetylglucosamine anabolism","type":"exact"},{"name":"N-acetylglucosamine biosynthesis","type":"exact"},{"name":"N-acetylglucosamine formation","type":"exact"},{"name":"N-acetylglucosamine synthesis","type":"exact"}],"termid":"GO:0006045"}


id: PBO:0031554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptidase_activity","termid":"PBO:0031554"}


id: MOD:02051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-lysine residue","synonyms":[{"name":"XlnkLys","type":"exact"}],"termid":"MOD:02051"}


id: PBO:0072592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRS1 divergent transcript","termid":"PBO:0072592"}


id: PATO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a tumour by virtue of the bearer's exhbiting the morphological characteristics of a glandular epithelial cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatous","termid":"PATO:0002090"}


id: PR:000027604
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed methylated form that is recognized by the HP1-like protein Swi6 in Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00663.","definition_xrefs":["PomBase:MAH","PMID:11242054","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9me","type":"exact"},{"name":"hht3/InitMet-/Me:(K10)","type":"exact"},{"name":"hht3/Me(K9)","type":"exact"}],"termid":"PR:000027604"}


id: PBO:0054390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1786","termid":"PBO:0054390"}


id: GO:0033249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of penicillin metabolic process","termid":"GO:0033246"},{"relation_name":"is_a","term_name":"regulation of penicillin catabolic process","termid":"GO:0033247"},{"relation_name":"positively_regulates","term_name":"penicillin catabolic process","termid":"GO:0042317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of penicillin catabolic process","synonyms":[{"name":"positive regulation of penicillin breakdown","type":"exact"},{"name":"positive regulation of penicillin catabolism","type":"exact"},{"name":"positive regulation of penicillin degradation","type":"exact"}],"termid":"GO:0033249"}


id: PBO:0069488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 755, pseudogene","termid":"PBO:0069488"}


id: PR:Q9P7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ker1 gene.","definition_xrefs":["UniProtKB:Q9P7P1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.03","synonyms":[{"name":"DNA-directed RNA polymerase I 17 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ker1","type":"exact"},{"name":"nucleolar protein ker1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7P1"}


id: GO:1902433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of water channel activity that is involved in maintenance of lens transparency.","definition_xrefs":["PMID:22095752","GOC:TermGenie","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of water channel activity","termid":"GO:1902429"},{"relation_name":"part_of","term_name":"maintenance of lens transparency","termid":"GO:0036438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of water channel activity involved in maintenance of lens transparency","synonyms":[{"name":"activation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"activation of water channel activity involved in preservation of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of lens transparency","type":"narrow"},{"name":"aquaporin activation involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"aquaporin activation involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"positive regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"positive regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"positive regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"up-regulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"up-regulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"up-regulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"up-regulation of water channel activity involved in preservation of lens transparency","type":"exact"},{"name":"upregulation of aquaporin involved in maintenance of lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in maintenance of ocular lens transparency","type":"narrow"},{"name":"upregulation of aquaporin involved in preservation of lens transparency","type":"narrow"},{"name":"upregulation of water channel activity involved in maintenance of lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in maintenance of ocular lens transparency","type":"exact"},{"name":"upregulation of water channel activity involved in preservation of lens transparency","type":"exact"}],"termid":"GO:1902433"}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_03197","SJAG_01087","SJAG_03043","SJAG_02510","SJAG_00315","SJAG_02535","SJAG_03297","SJAG_05248","SJAG_04847"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85169,93282,93283,108179,108180,108259,108260,108522,110535,110536,111402,111403,111761,112624,112625],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02510":null,"SJAG_02535":null,"SJAG_03043":null,"SJAG_03197":null,"SJAG_03297":null,"SJAG_04847":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: PBO:0054416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1812","termid":"PBO:0054416"}


id: GO:0033935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic links in oligoxyloglucans so as to remove successive isoprimeverose (i.e. alpha-xylo-1,6-beta-D-glucosyl-) residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"oligoxyloglucan beta-glycosidase activity","secondary_identifiers":["MetaCyc:3.2.1.120-RXN"],"synonyms":[{"name":"isoprimeverose-producing oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan xyloglucohydrolase activity","type":"related"}],"termid":"GO:0033935"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: PBO:0054639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2044","termid":"PBO:0054639"}


id: PBO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 partner transcriptional co-repressor 1","termid":"PBO:0072690"}


id: PBO:0011989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome complex disassembly protein Ntr2 (predicted)","termid":"PBO:0011989"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: FYPO:0002388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal riboflavin binding","termid":"FYPO:0002388"}


id: PATO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000175 behavioral function (obsolete PATO:0000175)","termid":"PATO:0000175"}


id: FYPO:0006919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during mitotic interphase","synonyms":[{"name":"normal protein localisation to nucleus during mitotic interphase","type":"exact"},{"name":"normal protein localization to nucleus during interphase of mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0006919"}


id: PBO:0090763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Sco1","termid":"PBO:0090763"}


id: PBO:0017638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein Hpz2","termid":"PBO:0017638"}


id: PBO:0066868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 168","termid":"PBO:0066868"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: FYPO:0007643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal in centromere outer repeat regions during G0 phase.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during G0","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during G0","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at centromere outer repeat during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during G0","type":"exact"}],"termid":"FYPO:0007643"}


id: PBO:0040288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 3","termid":"PBO:0040288"}


id: PBO:0064657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periphilin 1","termid":"PBO:0064657"}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: FYPO:0003591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is abnormal. The protein whose binding to the protein complex is affected may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein complex binding","termid":"FYPO:0003591"}


id: PBO:0108952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STBD1 pseudogene 1","termid":"PBO:0108952"}


id: PBO:0069870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1157, pseudogene","termid":"PBO:0069870"}


id: PBO:0062384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 2 pseudogene","termid":"PBO:0062384"}


id: GO:0061272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric connecting tubule over time, from its formation to the mature structure. The mesonephric connecting tubule is a tubular segment of the mesonephric nephron; it connects the distal tubule to the collecting duct in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"connecting tubule development","termid":"GO:0072027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric connecting tubule development","synonyms":[{"name":"mesonephric collecting tubule development","type":"exact"},{"name":"mesonephric connecting duct development","type":"related"}],"termid":"GO:0061272"}


id: PBO:0079375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 10","termid":"PBO:0079375"}


id: SO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in 3 prime overhangs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sticky_end_restriction_enzyme_cleavage_site","termid":"SO:0001692"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_sticky_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"three prime sticky end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001976"}


id: PBO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 antisense RNA 1","termid":"PBO:0042323"}


id: PBO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 6","termid":"PBO:0046596"}


id: GO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketogluconate metabolic process","secondary_identifiers":["MetaCyc:KETOGLUCONMET-PWY"],"synonyms":[{"name":"ketogluconate metabolism","type":"exact"}],"termid":"GO:0019522"}


id: PBO:0051648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 3","termid":"PBO:0051648"}


id: FYPO:0004103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, and shaped in the form of a sphere.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"viable spherical vegetative cell","synonyms":[{"name":"spherical viable cell","type":"exact"},{"name":"viable spherical cell","type":"exact"},{"name":"viable spherical cell during vegetative growth","type":"exact"},{"name":"viable spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004103"}


id: PBO:0071927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 4","termid":"PBO:0071927"}


id: PR:O13759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator csx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.09c","synonyms":[{"name":"Spom972h-csx1","type":"exact"}],"termid":"PR:O13759"}


id: GO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K5 acetylation (obsolete GO:0043977)","synonyms":[{"name":"histone H2A acetylation at K5","type":"exact"}],"termid":"GO:0043977"}


id: PBO:0048193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit beta 1","termid":"PBO:0048193"}


id: GO:0062134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts, increases the frequency, rate or extent of L-glutamine biosynthesis.","definition_xrefs":["PMID:19755423","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-glutamine biosynthetic process","termid":"GO:0062134"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","PomBase:mah","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: PBO:0049588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 6","termid":"PBO:0049588"}


id: GO:0045190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin genes involved in immune response","termid":"GO:0002204"},{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0010467","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"isotype switching","secondary_identifiers":["Wikipedia:Immunoglobulin_class_switching"],"synonyms":[{"name":"class switch recombination","type":"exact"},{"name":"class switching","type":"exact"},{"name":"isotype switch recombination","type":"exact"}],"termid":"GO:0045190"}


id: PBO:0066461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REX4 homolog, 3'-5' exonuclease","termid":"PBO:0066461"}


id: PBO:0088411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional aromatic polypeptide Aro1","termid":"PBO:0088411"}


id: GO:1990914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the periplasmic side of the membrane.","definition_xrefs":["GOC:bhm","PMID:15919996"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of periplasmic side of plasma membrane (obsolete GO:1990914)","termid":"GO:1990914"}


id: GO:0051169
data:
  {"annotated_genes":["SJAG_04312","SJAG_04284","SJAG_03182","SJAG_04721","SJAG_02250","SJAG_00093","SJAG_04940","SJAG_01328","SJAG_03882","SJAG_03662","SJAG_00178","SJAG_01083","SJAG_04115","SJAG_02520","SJAG_01529","SJAG_04202","SJAG_02998","SJAG_02425","SJAG_00375","SJAG_03836","SJAG_04310","SJAG_01245","SJAG_04656","SJAG_04347","SJAG_01358","SJAG_04400","SJAG_01805","SJAG_01789","SJAG_01293","SJAG_01449","SJAG_02209","SJAG_03002","SJAG_02274","SJAG_03299","SJAG_00383","SJAG_00065","SJAG_01655","SJAG_00992","SJAG_03697","SJAG_02592","SJAG_03593","SJAG_01715","SJAG_01621","SJAG_00586","SJAG_03907","SJAG_01909","SJAG_04379","SJAG_04480","SJAG_04308","SJAG_01391","SJAG_04622","SJAG_01338","SJAG_00753","SJAG_02534","SJAG_01584","SJAG_00840","SJAG_03658","SJAG_03012","SJAG_04589","SJAG_01125","SJAG_04017","SJAG_04148","SJAG_04645","SJAG_03693","SJAG_01311","SJAG_04464","SJAG_03453","SJAG_02757","SJAG_01834","SJAG_00968","SJAG_03048","SJAG_03300","SJAG_02704","SJAG_05328","SJAG_03847","SJAG_00962","SJAG_04536","SJAG_01065","SJAG_04083","SJAG_02661","SJAG_02210","SJAG_00298","SJAG_01374","SJAG_03729","SJAG_03496","SJAG_03986","SJAG_00471","SJAG_01652","SJAG_03156","SJAG_00641","SJAG_01339","SJAG_04472","SJAG_04366","SJAG_01534","SJAG_03470","SJAG_03959","SJAG_03719","SJAG_03281","SJAG_01185","SJAG_04411","SJAG_01013","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051170"},{"annotations":[99078,101437,85144,110942,113289,93200,111554,113415,100019,97226,86736,85617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[101865],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[97227,102213,87820,112467,114708,99747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[64046,89537,100853,112091,83533,112512,94041,113317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006913"},{"annotations":[68837,103702,111040,100020,88295,98043,97941,112468,98726,93049,98825,102222,112363,92635,101800,105924,107179,97467,111848,112615,109306,107809,111555,110511,114929,112106,114033,106491,87070,104758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[97928,89910,107073,96519],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046827"},{"annotations":[90473,98466,86970],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[105660,113416,113695,87195,104531,92606,97228,89260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006611"},{"annotations":[99748,100628,96491,91078,98633,91865,106493,111849,85058,89555,101112,85152,99460,92226,99079,85564,103840,111041,90386,113290,101438,114709,98727,109307,111556,93928,102994,111875,65505,110943,102391,89498,90093,102637,110512,104532,87071,88030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[112279,97952,101801,85914,87196,113696,114199,95720,99080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[99081,87197,95894,93176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[99479,102216,100021,101439,91079,92227,98728,107498,112216,85153,90094,93169,87822,96493,106494,97468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[90095,91080,92228,101114,92607,85154,96494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[108054,101329,109592,85487,101802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[109593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of, or within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":102,"genes_by_uniquename":{"SJAG_00065":null,"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00383":null,"SJAG_00471":null,"SJAG_00586":null,"SJAG_00641":null,"SJAG_00753":null,"SJAG_00840":null,"SJAG_00962":null,"SJAG_00968":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01125":null,"SJAG_01185":null,"SJAG_01245":null,"SJAG_01293":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01621":null,"SJAG_01652":null,"SJAG_01655":null,"SJAG_01715":null,"SJAG_01789":null,"SJAG_01805":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02209":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02592":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03012":null,"SJAG_03048":null,"SJAG_03156":null,"SJAG_03182":null,"SJAG_03281":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03496":null,"SJAG_03593":null,"SJAG_03658":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03836":null,"SJAG_03847":null,"SJAG_03882":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04284":null,"SJAG_04308":null,"SJAG_04310":null,"SJAG_04312":null,"SJAG_04347":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04400":null,"SJAG_04411":null,"SJAG_04464":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Nuclear_transport"],"synonyms":[{"name":"nucleus transport","type":"exact"}],"termid":"GO:0051169","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0006606":null,"GO:0006607":null,"GO:0006611":null,"GO:0006913":null,"GO:0016973":null,"GO:0031990":null,"GO:0042307":null,"GO:0042308":null,"GO:0046827":null,"GO:0051170":null,"GO:0071528":null}}


id: GO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when glycine betaine has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:kmv","PMID:24212673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycine betaine-activated nonselective monoatomic cation channel activity","synonyms":[{"name":"glycine betaine-activated nonselective monovalent cation channel activity","type":"related"}],"termid":"GO:0090686"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: PBO:0083700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; functionally redundant with Ent1p; contains clathrin-binding motif at C-terminus; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0083700"}


id: GO:0034718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the survival motor neuron (SMN) protein and Gemin2; may form the stable core of the larger SMN complex.","definition_xrefs":["PMID:17640873","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"SMN-Gemin2 complex","termid":"GO:0034718"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: PBO:0045807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic ectoderm development","termid":"PBO:0045807"}


id: GO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC protein binding","synonyms":[{"name":"major histocompatibility complex binding","type":"exact"},{"name":"major histocompatibility complex ligand","type":"narrow"}],"termid":"GO:0042287"}


id: GO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to euchromatin and the nuclear inner membrane, in order to establish and maintain the euchromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"euchromatin-nuclear membrane anchor activity","synonyms":[{"name":"euchromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-euchromatin anchor activity","type":"exact"},{"name":"nuclear membrane-euchromatin tether activity","type":"exact"}],"termid":"GO:0062240"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: PBO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor, glutathione S-transferase (predicted)","termid":"PBO:0018214"}


id: PR:Q92338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ABC1 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.18","synonyms":[{"name":"Spom972h-abc1","type":"exact"}],"termid":"PR:Q92338"}


id: PBO:0084184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both the Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the arginine methyltransferase, Hmt1p","termid":"PBO:0084184"}


id: MOD:00818
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to a glycosylphosphatidylinositolethanolamidated.","definition_xrefs":["PubMed:12643538","Unimod:394#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositolated residue","synonyms":[{"name":"GPIRes","type":"exact"},{"name":"GPIanchor","type":"related"},{"name":"LIPID GPI-anchor amidated carboxyl end","type":"exact"},{"name":"glycosylphosphatidylinositol","type":"related"}],"termid":"MOD:00818"}


id: PBO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 3","termid":"PBO:0048634"}


id: FYPO:0004492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 5' end of an RNA molecule is abnormal.","definition_xrefs":["GO:0000967","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal RNA 5'-end processing","synonyms":[{"name":"abnormal RNA 5'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 5'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004492"}


id: GO:0005188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein (sensu Insecta) (obsolete GO:0005188)","synonyms":[{"name":"arylphorin","type":"narrow"},{"name":"larval serum protein (sensu Insecta)","type":"exact"}],"termid":"GO:0005188"}


id: PBO:0016073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node protein Nod1","termid":"PBO:0016073"}


id: GO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosphingosine metabolic process","termid":"GO:0006671"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phytosphingosine biosynthetic process","synonyms":[{"name":"phytosphingosine anabolism","type":"exact"},{"name":"phytosphingosine biosynthesis","type":"exact"},{"name":"phytosphingosine formation","type":"exact"},{"name":"phytosphingosine synthesis","type":"exact"}],"termid":"GO:0071602"}


id: GO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with a plasmid, an extrachromosomal genetic element usually characterized as a covalently continuous double stranded DNA molecule found in bacteria and some other microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmid binding (obsolete GO:0003694)","synonyms":[{"name":"plasmid binding","type":"exact"},{"name":"plasmid-associated protein","type":"related"}],"termid":"GO:0003694"}


id: GO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of lung cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus cartilage development","synonyms":[{"name":"pulmonary cartilage development","type":"exact"}],"termid":"GO:0060532"}


id: PBO:0016047
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type Auxiliary Minus","termid":"PBO:0016047"}


id: PBO:0053203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 2","termid":"PBO:0053203"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: PBO:0048562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated olfactory signaling regulator","termid":"PBO:0048562"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: PBO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_spore_plasma_membrane","termid":"PBO:0035929"}


id: PBO:0065042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 7","termid":"PBO:0065042"}


id: GO:0033207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an acceptor molecule, forming a beta-1,4 linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-1,4-N-acetylgalactosaminyltransferase activity","synonyms":[{"name":"beta-1,4-GalNAc transferase activity","type":"exact"}],"termid":"GO:0033207"}


id: FYPO:0002002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one or more nuclei and more than one septum, and the septa are grouped together between two compartments, one or more of which may contain one or multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"multiseptate vegetative cell, septa grouped","synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"multiseptate cell, septa grouped, during vegetative growth","type":"exact"},{"name":"multiseptate vegetative cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"},{"name":"vegetative cell with premature septation","type":"related"}],"termid":"FYPO:0002002"}


id: PBO:0070012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1309, pseudogene","termid":"PBO:0070012"}


id: GO:0006842
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108324,87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The directed movement of tricarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006842","terms_by_termid":{"GO:0006843":null}}


id: GO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving daunorubicin, a chemotherapeutic of the anthracycline family that is given as a treatment for some types of cancer.","definition_xrefs":["PMID:20837989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"daunorubicin metabolic process","termid":"GO:0044597"}


id: PBO:0108595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 interacting ribosome maturation factor","termid":"PBO:0108595"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: GO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of fractalkine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:12729461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fractalkine production","secondary_identifiers":["GO:0050756","GO:0050754","GO:0050751"],"synonyms":[{"name":"ABCD-3 production","type":"exact"},{"name":"CX3CL1 production","type":"exact"},{"name":"fractalkine biosynthetic process","type":"narrow"},{"name":"fractalkine metabolic process","type":"narrow"},{"name":"neurotactin production","type":"exact"}],"termid":"GO:0032603"}


id: PBO:0034288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_inhibits","termid":"PBO:0034288"}


id: PBO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulation_target","termid":"PBO:0006183"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: PBO:0062093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 43 pseudogene","termid":"PBO:0062093"}


id: PBO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: FYPO:0003990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to DNA damage during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:15643072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damage","termid":"FYPO:0000265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to DNA damage during mitotic S phase","synonyms":[{"name":"decreased growth during cellular response to DNA damage during mitotic S phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to DNA damage during mitotic S phase","type":"exact"},{"name":"hypersensitive to DNA damage during mitotic S phase","type":"exact"},{"name":"sensitive to DNA damage during S phase of mitotic cell cycle","type":"related"},{"name":"sensitive to DNA damage during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0003990"}


id: GO:0048871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state at the level of the multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"homeostatic process","termid":"GO:0042592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}


id: GO:0000027
data:
  {"annotated_genes":["SJAG_02868","SJAG_02830","SJAG_01606","SJAG_02508","SJAG_01811","SJAG_04108","SJAG_04599","SJAG_00841","SJAG_03080","SJAG_02754","SJAG_01420","SJAG_04395","SJAG_01454","SJAG_02952","SJAG_04992","SJAG_03773","SJAG_04304","SJAG_04492","SJAG_02427","SJAG_03496","SJAG_03466","SJAG_01339","SJAG_00882","SJAG_01568","SJAG_00722","SJAG_03458","SJAG_01122","SJAG_00689","SJAG_05679","SJAG_01161","SJAG_04180","SJAG_04940","SJAG_02840","SJAG_03012","SJAG_04176","SJAG_04004","SJAG_01839","SJAG_02535","SJAG_04847","SJAG_03666","SJAG_00323","SJAG_04066","SJAG_00949","SJAG_04669","SJAG_02436","SJAG_02759","SJAG_05248"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89463,93578,93579,97283,98563,98564,99754,101610,111693,111760,113793,114198],"is_not":false,"summary":null,"term":"GO:0000027"},{"annotations":[105074,112213,85759,96482,98597,108200,112699,114901,96666,89301,96809,106872,99587,102059,107497,94076,108956,88907,95264,111818,111819,103500,88490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902626"},{"annotations":[90935,100208,112622,94077,100863,97982,106802,95542,98598,111401,112623,111400,100357,100129,106801,88200,83812,97981,93168,101269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180023"},{"annotations":[104446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902775"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.","definition_xrefs":["PMID:30467428","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosome assembly","termid":"GO:0042255"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00323":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00841":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01122":null,"SJAG_01161":null,"SJAG_01339":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01568":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02508":null,"SJAG_02535":null,"SJAG_02754":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02840":null,"SJAG_02868":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03666":null,"SJAG_03773":null,"SJAG_04004":null,"SJAG_04066":null,"SJAG_04108":null,"SJAG_04176":null,"SJAG_04180":null,"SJAG_04304":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04599":null,"SJAG_04669":null,"SJAG_04847":null,"SJAG_04940":null,"SJAG_04992":null,"SJAG_05248":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"ribosomal large subunit assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"50S ribosomal subunit assembly","type":"narrow"},{"name":"60S ribosomal subunit assembly","type":"narrow"}],"termid":"GO:0000027","terms_by_termid":{"GO:0000027":null,"GO:0180023":null,"GO:1902626":null,"GO:1902775":null}}


id: MOD:00099
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-isoleucine amide.","definition_xrefs":["RESID:AA0090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine amide","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanamide","type":"exact"},{"name":"IleN","type":"exact"},{"name":"L-isoleucine amide","type":"exact"},{"name":"MOD_RES Isoleucine amide","type":"exact"},{"name":"amidated L-isoleucine","type":"exact"},{"name":"isoleucinamide","type":"exact"}],"termid":"MOD:00099"}


id: PBO:0063974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 8","termid":"PBO:0063974"}


id: GO:1905437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 trimethylation (obsolete GO:1905437)","synonyms":[{"name":"activation of histone H3-K4 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K4 trimethylation","type":"exact"}],"termid":"GO:1905437"}


id: PBO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 4","termid":"PBO:0050612"}


id: PBO:0003752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L7 (predicted)","termid":"PBO:0003752"}


id: PBO:0053412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 349","termid":"PBO:0053412"}


id: PBO:0074307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 1","termid":"PBO:0074307"}


id: PBO:0046081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 6","termid":"PBO:0046081"}


id: GO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:mtg_sensu","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"positively_regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"}


id: PBO:0017023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR33","termid":"PBO:0017023"}


id: PBO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod2","termid":"PBO:0000101"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: PBO:0064024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 58","termid":"PBO:0064024"}


id: MOD:00233
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoguanosine through a phosphoramide ester bond to form N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["PubMed:6092377","Unimod:413#K","DeltaMass:304","RESID:AA0228","PubMed:6264433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-guanosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-guanosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-guanylic-N6-L-lysine","type":"exact"},{"name":"5'phos Guanosyl","type":"exact"},{"name":"ACT_SITE N6-GMP-lysine intermediate","type":"exact"},{"name":"L-lysine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(zeta)-5'-guanylic-lysine","type":"exact"},{"name":"N6-(5'-guanylyl)-lysine","type":"exact"},{"name":"N6-(phospho-5'-guanosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-guanosine phosphoramidester","type":"exact"},{"name":"N6GMPLys","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"epsilon-5'-guanylic-L-lysine","type":"exact"},{"name":"lysine guanosine-5'-monophosphate","type":"exact"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:00233"}


id: GO:0110076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:29290465","PMID:25402683","GOC:sp","PMID:24439385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"negatively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ferroptosis","termid":"GO:0110076"}


id: GO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:19318610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"priming of cellular response to stress","synonyms":[{"name":"priming of response to stress","type":"broad"},{"name":"priming of stress response","type":"broad"}],"termid":"GO:0080136"}


id: PBO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2L1 divergent transcript","termid":"PBO:0060938"}


id: FYPO:0002357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNA is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"protein-RNA interaction phenotype","termid":"FYPO:0002131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002131","FYPO:0000257"],"is_obsolete":false,"name":"normal protein-RNA interaction","synonyms":[{"name":"normal RNA binding","type":"exact"},{"name":"normal RNA-protein interaction","type":"exact"}],"termid":"FYPO:0002357"}


id: PBO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2 like","termid":"PBO:0045779"}


id: FYPO:0005499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a lower extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from CRE promoter","termid":"FYPO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"decreased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"},{"name":"expression of CRE target genes decreased during cellular response to miconazole","type":"related"}],"termid":"FYPO:0005499"}


id: PBO:0090705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) residue 32 (cytosine-3-)-methyltransferase Trm141","termid":"PBO:0090705"}


id: PBO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"after human WDR21","termid":"PBO:0000291"}


id: PBO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-destabilized_iron-sulfur_cluster_binding","termid":"PBO:0030494"}


id: PATO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001204 not enlarged (obsolete PATO:0001204)","termid":"PATO:0001204"}


id: GO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing.","definition_xrefs":["PMID:11684676","PMID:12215544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RS domain binding","termid":"GO:0050733"}


id: MOD:00237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-beta-methylthioaspartic acid.","definition_xrefs":["PubMed:15473684","ChEBI:73599","OMSSA:26","RESID:AA0232","DeltaMass:61","PubMed:8844851","Unimod:39#D","OMSSA:13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"methylthiolated residue","termid":"MOD:01153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-beta-methylthioaspartic acid","synonyms":[{"name":"(2R,3Xi)-2-amino-3-(methylsulfanyl)butanedioic acid","type":"exact"},{"name":"3-(methylthio)-L-aspartic acid","type":"exact"},{"name":"3-carboxy-S-methyl-cysteine","type":"exact"},{"name":"3-methylthio-aspartic acid","type":"exact"},{"name":"3MeSAsp","type":"exact"},{"name":"Beta-methylthiolation","type":"related"},{"name":"MOD_RES 3-methylthioaspartic acid","type":"exact"},{"name":"Methylthio","type":"related"},{"name":"beta-Methylthio-aspartic acid","type":"exact"},{"name":"beta-methylthio-aspartic acid","type":"exact"},{"name":"bmethylthiold","type":"exact"},{"name":"methythiold","type":"exact"}],"termid":"MOD:00237"}


id: PR:Q09860
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01825","PANTHER:PTHR10890:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.06c","secondary_identifiers":["UniProtKB:Q09860"],"synonyms":[{"name":"CysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CARS","type":"exact"},{"name":"cysteinyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09860"}


id: GO:0071933
data:
  {"annotated_genes":["SJAG_02228","SJAG_01732","SJAG_04001","SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86997,94023,99340,103227],"is_not":false,"summary":null,"term":"GO:0071933"}]},"cv_name":"molecular_function","definition":"Binding to an Arp2/3 complex, a protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_02228":null,"SJAG_03455":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Arp2/3 complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071933","terms_by_termid":{"GO:0071933":null}}


id: GO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"N-malonyltransferase activity","termid":"GO:0050735"}


id: PBO:0003701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein","termid":"PBO:0003701"}


id: PBO:0077682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFSF12-TNFSF13 readthrough","termid":"PBO:0077682"}


id: PBO:0058251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4538","termid":"PBO:0058251"}


id: PBO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.3.8","termid":"PBO:0005599"}


id: FYPO:0002372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable and are shaped in the form of spheroids.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable spheroid vegetative cell population (obsolete FYPO:0002372)","synonyms":[{"name":"population of spheroid viable cells","type":"exact"},{"name":"viable rounded vegetative cell population","type":"exact"}],"termid":"FYPO:0002372"}


id: RO:HOM0000016
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves a pseudogenic feature and its functional ancestor.","definition_xrefs":["SO:non_functional_homolog_of"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_non_functional_homology_relationship_with","synonyms":[{"name":"non functional homologous to","type":"exact"},{"name":"pseudogene","type":"broad"}],"termid":"RO:HOM0000016"}


id: GO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a inadequate blood supply.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ischemia","termid":"GO:0002931"}


id: GO:0097211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:yaf","PMID:15976007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to gonadotropin-releasing hormone","termid":"GO:0097210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gonadotropin-releasing hormone","synonyms":[{"name":"cellular response to GnRH","type":"exact"},{"name":"cellular response to gonadotrophin-releasing hormone","type":"exact"}],"termid":"GO:0097211"}


id: PBO:0028304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitosis","termid":"PBO:0028304"}


id: PR:Q9Y7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.08c","secondary_identifiers":["UniProtKB:Q9Y7R8"],"synonyms":[{"name":"Spom972h-MDH2","type":"exact"}],"termid":"PR:Q9Y7R8"}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: PBO:0045327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 6","termid":"PBO:0045327"}


id: PBO:0003975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc6","termid":"PBO:0003975"}


id: PBO:0045041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 1","termid":"PBO:0045041"}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: GO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a sterol ester is formed by the combination of a carboxylic acid (often a fatty acid) and a sterol molecule (e.g. cholesterol).","definition_xrefs":["GOC:pde","GOC:BHF","GOC:rl","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol esterification (obsolete GO:0034434)","termid":"GO:0034434"}


id: GO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA ligation","termid":"GO:0006266"}


id: PR:O14134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor elf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.08c","synonyms":[{"name":"Spom972h-elf1","type":"exact"}],"termid":"PR:O14134"}


id: GO:1901304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyamine biosynthetic process","termid":"GO:0010967"},{"relation_name":"regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spermidine biosynthetic process","synonyms":[{"name":"regulation of spermidine anabolism","type":"exact"},{"name":"regulation of spermidine biosynthesis","type":"exact"},{"name":"regulation of spermidine formation","type":"exact"},{"name":"regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901304"}


id: GO:0015836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipid-linked peptidoglycans into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transport","termid":"GO:0015835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lipid-linked peptidoglycan transport","synonyms":[{"name":"lipid-linked murein transport","type":"exact"}],"termid":"GO:0015836"}


id: SO:1000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a purine, A or G, for another purine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_transition","synonyms":[{"name":"purine transition","type":"exact"}],"termid":"SO:1000014"}


id: PR:000030005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe ypt5 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SPAC6F6.15","type":"related"},{"name":"Spom-ypt5","type":"exact"}],"termid":"PR:000030005"}


id: FYPO:0003703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0005447","FYPO:0001985","FYPO:0000652","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}


id: PBO:0081292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75a","termid":"PBO:0081292"}


id: GO:0006528
data:
  {"annotated_genes":["SJAG_02832","SJAG_04549","SJAG_00881","SJAG_02276","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91050],"is_not":false,"summary":null,"term":"GO:0006528"},{"annotations":[106857,98240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[102046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[98241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00881":null,"SJAG_02276":null,"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"asparagine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ASPARAGINESYN-PWY"],"synonyms":[{"name":"asparagine metabolism","type":"exact"}],"termid":"GO:0006528","terms_by_termid":{"GO:0006528":null,"GO:0006529":null,"GO:0006530":null,"GO:0019266":null,"GO:0070981":null}}


id: PBO:0065553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTGER4P2-CDK2AP2P2 readthrough, transcribed pseudogene","termid":"PBO:0065553"}


id: PBO:0040967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 38","termid":"PBO:0040967"}


id: PBO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 2","termid":"PBO:0046525"}


id: GO:0039569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host STAT2 (signal transducer and activator of transcription-2) by promoting the ubiquitin-dependent degradation of STAT2, mediated by the proteasome.","definition_xrefs":["PMID:19279106","PMID:11336548","PMID:17251292","VZ:257"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by positive regulation of STAT2 catabolic process (obsolete GO:0039569)","synonyms":[{"name":"promotion by virus of proteosome-dependent STAT2 degradation","type":"exact"},{"name":"suppression by virus of host STAT2 activity by positive promotion of STAT2 proteasome-mediated degradation","type":"exact"},{"name":"targeting STAT2 for proteasome-mediated degradation","type":"exact"}],"termid":"GO:0039569"}


id: PBO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-3","termid":"PBO:0052874"}


id: FYPO:0007494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of beta-D-glucan measured in the spore wall is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall beta-glucan level","termid":"FYPO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002946","FYPO:0005447"],"is_obsolete":false,"name":"increased ascospore wall beta-glucan level","synonyms":[{"name":"increased ascospore wall beta-D-glucan level","type":"exact"},{"name":"increased ascospore wall beta-glucan accumulation","type":"related"},{"name":"increased ascospore wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased ascospore wall beta-glucan level during vegetative growth","type":"exact"},{"name":"increased spore wall beta-glucan level","type":"exact"}],"termid":"FYPO:0007494"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PBO:0084127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexaprenyl pyrophosphate synthetase; catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis","termid":"PBO:0084127"}


id: PBO:0065825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5 interacting factor","termid":"PBO:0065825"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: PBO:0018205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, involved in endocytosis (predicted)","termid":"PBO:0018205"}


id: GO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: PR:P40383
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-3' exoribonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00728","PRO:DNx","PANTHER:PTHR12341:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.14","secondary_identifiers":["UniProtKB:P40383"],"synonyms":[{"name":"Exo II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRN1","type":"exact"},{"name":"exonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p140 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P40383"}


id: PBO:0040306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit alpha","termid":"PBO:0040306"}


id: PBO:0088672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein","termid":"PBO:0088672"}


id: PBO:0077950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 9-1","termid":"PBO:0077950"}


id: PBO:0081527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF436 antisense RNA 1","termid":"PBO:0081527"}


id: PBO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 4","termid":"PBO:0051674"}


id: PBO:0076934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 2","termid":"PBO:0076934"}


id: PBO:0078094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 3","termid":"PBO:0078094"}


id: PBO:0086822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL011C is not an essential gene","termid":"PBO:0086822"}


id: PBO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 20","termid":"PBO:0071414"}


id: GO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"positively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uredospore formation","synonyms":[{"name":"positive regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075253"}


id: PBO:0059234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L4","termid":"PBO:0059234"}


id: GO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar assembly (obsolete GO:0005479)","synonyms":[{"name":"vacuolar assembly","type":"exact"}],"termid":"GO:0005479"}


id: PBO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 2","termid":"PBO:0044299"}


id: PBO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K12_acetylation_during_vegetative_growth","termid":"PBO:0036093"}


id: PBO:0079655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 3","termid":"PBO:0079655"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: FYPO:0001616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular valine level","synonyms":[{"name":"decreased cellular L-valine level","type":"exact"},{"name":"decreased cellular valine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular valine level during vegetative growth","type":"exact"},{"name":"decreased level of valine in cell","type":"exact"},{"name":"reduced cellular valine level","type":"exact"},{"name":"reduced level of valine in cell","type":"exact"}],"termid":"FYPO:0001616"}


id: GO:0009935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nutrients into a cell or organelle.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete nutrient import (obsolete GO:0009935)","synonyms":[{"name":"nutrient import","type":"exact"},{"name":"nutrient uptake","type":"exact"}],"termid":"GO:0009935"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: GO:0033910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotetraose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotetraohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.60-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotetraohydrolase activity","type":"related"},{"name":"G4-amylase activity","type":"related"},{"name":"exo-maltotetraohydrolase activity","type":"related"},{"name":"glucan 1,4-alpha-maltotetrahydrolase activity","type":"related"},{"name":"maltotetraose-forming amylase activity","type":"related"}],"termid":"GO:0033910"}


id: PBO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 3","termid":"PBO:0039522"}


id: PBO:0059645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 11","termid":"PBO:0059645"}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: GO:0018583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,3-diol + O2 = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O.","definition_xrefs":["EC:1.13.11.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biphenyl-2,3-diol 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0127","MetaCyc:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN","RHEA:14413"],"synonyms":[{"name":"2,3-dihydroxybiphenyl 1,2-dioxygenase activity","type":"broad"},{"name":"2,3-dihydroxybiphenyl dioxygenase activity","type":"broad"},{"name":"biphenyl-2,3-diol dioxygenase activity","type":"related"},{"name":"biphenyl-2,3-diol:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0018583"}


id: PBO:0060356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardin","termid":"PBO:0060356"}


id: GO:0015600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.4","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate porter activity (obsolete GO:0015600)","synonyms":[{"name":"glutamate/aspartate porter activity","type":"exact"}],"termid":"GO:0015600"}


id: GO:1904511
data:
  {"annotated_genes":["SJAG_00723","SJAG_02761","SJAG_03052","SJAG_00851","SJAG_02336","SJAG_02695","SJAG_00140","SJAG_00113","SJAG_03540","SJAG_01196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85752,93071,96446,98399,99824,99959,110093,114657],"is_not":false,"summary":null,"term":"GO:1904511"},{"annotations":[91301,93667,99821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"Any microtubule plus-end that is part of a cytoplasmic microtubule.","definition_xrefs":["GOC:TermGenie","PMID:15772152","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule plus-end","termid":"GO:0035371"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"cytoplasmic microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"growing microtubule plus end of cytoplasmic microtubule","type":"exact"},{"name":"growing microtubule plus end of non-spindle-associated astral microtubule","type":"narrow"},{"name":"microtubule plus end of cytoplasmic microtubule","type":"exact"},{"name":"microtubule plus end of non-spindle-associated astral microtubule","type":"narrow"},{"name":"microtubule plus-end of cytoplasmic microtubule","type":"exact"},{"name":"microtubule plus-end of non-spindle-associated astral microtubule","type":"narrow"}],"termid":"GO:1904511","terms_by_termid":{"GO:1903754":null,"GO:1904511":null}}


id: PBO:0069170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 422, pseudogene","termid":"PBO:0069170"}


id: PBO:0064400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARN like ribonuclease domain containing exonuclease 1","termid":"PBO:0064400"}


id: PBO:0038529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 3, phospholipase","termid":"PBO:0038529"}


id: PBO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 4","termid":"PBO:0071919"}


id: PBO:0058307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4680","termid":"PBO:0058307"}


id: PBO:0046410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERG-positive prostate cancer associated androgen responsive transcript","termid":"PBO:0046410"}


id: PBO:0049123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein family member 3","termid":"PBO:0049123"}


id: GO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 8.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 8 signaling pathway","synonyms":[{"name":"TLR8 signaling pathway","type":"exact"},{"name":"toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034158"}


id: PBO:0035878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_telomere_during_vegetative_growth","termid":"PBO:0035878"}


id: PBO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp15 (predicted)","termid":"PBO:0000407"}


id: PBO:0063801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHKA1 antisense RNA 1","termid":"PBO:0063801"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: PBO:0027451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_at_low_temperature","termid":"PBO:0027451"}


id: GO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephron are generated and organized. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron morphogenesis","termid":"GO:0072028"}


id: PBO:0049101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 158","termid":"PBO:0049101"}


id: PBO:0067201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 266, pseudogene","termid":"PBO:0067201"}


id: PBO:0049477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.1 linker histone, cluster member","termid":"PBO:0049477"}


id: PBO:0082955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein containing a zinc finger domain; sequence similarity to that of Type I J-proteins; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin patch assembly","termid":"PBO:0082955"}


id: PBO:0074477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMUG1 antisense RNA 1","termid":"PBO:0074477"}


id: PBO:0077425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B pseudogene 1","termid":"PBO:0077425"}


id: GO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.","definition_xrefs":["PMID:17905721","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed trichome differentiation","synonyms":[{"name":"cotton fiber development","type":"narrow"},{"name":"seed hair differentiation","type":"exact"},{"name":"seed trichome development","type":"related"}],"termid":"GO:0090376"}


id: PBO:0068905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 147, pseudogene","termid":"PBO:0068905"}


id: PBO:0072648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhotekin 2","termid":"PBO:0072648"}


id: GO:2001009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001009"}


id: PBO:0074418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 17","termid":"PBO:0074418"}


id: FYPO:0005244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing arabinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on arabinose carbon source","synonyms":[{"name":"decreased growth on arabinose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on arabinose carbon source","type":"exact"},{"name":"reduced cell growth on arabinose carbon source","type":"related"},{"name":"slow cell growth on arabinose carbon source","type":"narrow"}],"termid":"FYPO:0005244"}


id: PBO:0064741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 77","termid":"PBO:0064741"}


id: GO:0071650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 5 production","termid":"GO:0071649"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"negative regulation of CCL5 production","type":"exact"},{"name":"negative regulation of RANTES production","type":"exact"},{"name":"negative regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071650"}


id: PBO:0079861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone B","termid":"PBO:0079861"}


id: PBO:0029534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_normal_volume_spheroid_cells_(obsolete_FYPO:0002188)","termid":"PBO:0029534"}


id: GO:0008489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["PMID:9593693","RHEA:31495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9851347","MetaCyc:RXN-12119","EC:2.4.1.274"],"synonyms":[{"name":"LacCer synthase activity","type":"exact"},{"name":"UDP-galactose glucosylceramide beta-1,4-galactosyltransferase activity","type":"exact"},{"name":"lactosylceramide synthase activity","type":"exact"}],"termid":"GO:0008489"}


id: MOD:00568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 245 is redundant with Unimod 349. Remap to MOD:00776","definition_xrefs":["PubMed:9582379","PubMed:339692","PubMed:6692818","PubMed:8089117","PubMed:4399050","PubMed:5764436","PubMed:9521123","Unimod:245","PubMed:1097438"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00568 histidine oxidation to aspartic acid (obsolete MOD:00568)","termid":"MOD:00568"}


id: GO:0006102
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95853],"is_not":false,"summary":null,"term":"GO:0006102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"isocitrate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isocitrate metabolism","type":"exact"}],"termid":"GO:0006102","terms_by_termid":{"GO:0006102":null}}


id: GO:0000417
data:
  {"annotated_genes":["SJAG_00925","SJAG_00913","SJAG_00914","SJAG_04561"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99641,104838,104844,108862],"is_not":false,"summary":null,"term":"GO:0000417"}]},"cv_name":"cellular_component","definition":"A protein complex proposed to be involved in replication-independent nucleosome assembly, by promoting histone deposition onto DNA. For example, in Saccharomyces, the complex contains Hir1p, Hir2p, Hir3p, and Hpc2p.","definition_xrefs":["PMID:16303565","GOC:elh","GOC:mah","PMID:17180700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_04561":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HIR complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HIRA complex","type":"exact"}],"termid":"GO:0000417","terms_by_termid":{"GO:0000417":null}}


id: PBO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 12","termid":"PBO:0060715"}


id: GO:0006438
data:
  {"annotated_genes":["SJAG_02428","SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061475"},{"annotations":[93768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070185"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. The valyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a valine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_02428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006438","terms_by_termid":{"GO:0061475":null,"GO:0070185":null}}


id: FYPO:0000245
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115463],"is_not":false,"summary":null,"term":"FYPO:0000245"},{"annotations":[115328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04312":null},"genotype_count":2,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"loss of viability in stationary phase","references_by_uniquename":{"PMID:27678009":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527","SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased chronological lifespan","type":"related"},{"name":"decreased viability in stationary phase","type":"exact"},{"name":"growth defect, required for stationary phase","type":"related"},{"name":"increased chronological cell aging","type":"related"},{"name":"loss of cell population viability in stationary phase","type":"exact"},{"name":"reduced viability in stationary phase","type":"exact"}],"termid":"FYPO:0000245","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000245":null,"FYPO:0005231":null}}


id: PBO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 27","termid":"PBO:0071609"}


id: GO:0062028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of stress granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of stress granule assembly","termid":"GO:0062028"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: PR:Q10364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sck2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase sck2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.14c","synonyms":[{"name":"Spom972h-sck2","type":"exact"}],"termid":"PR:Q10364"}


id: PBO:0073664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal-induced proliferation-associated 1","termid":"PBO:0073664"}


id: PBO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA synthase 2","termid":"PBO:0050182"}


id: PBO:0110510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase Ssd2","termid":"PBO:0110510"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: FYPO:0006143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of protein tyrosine residues begins later than normal. All protein tyrosine dephosphorylation may be affected, or tyrosine residues in one or more specific proteins, or at specific protein sites, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete delayed onset of protein tyrosine dephosphorylation during vegetative growth (obsolete FYPO:0006143)","synonyms":[{"name":"delayed onset of peptidyl-tyrosine dephosphorylation during vegetative growth","type":"exact"},{"name":"delayed onset of protein tyrosine dephosphorylation during mitotic cell cycle","type":"related"},{"name":"delayed protein tyrosine dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006143"}


id: PBO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 33","termid":"PBO:0070662"}


id: GO:0035788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the metanephric kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in metanephros development","synonyms":[{"name":"cell migration involved in metanephric kidney development","type":"exact"}],"termid":"GO:0035788"}


id: PBO:0079705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 1","termid":"PBO:0079705"}


id: FYPO:0001343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic DNA replication","synonyms":[{"name":"abnormal DNA replication during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication during vegetative growth","type":"exact"},{"name":"abnormal DNA-dependent DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001343"}


id: GO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a J-chain-containing polymeric immunoglobulin of the IgA or IgM isotypes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polymeric immunoglobulin binding","termid":"GO:0001790"}


id: PBO:0039608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 1","termid":"PBO:0039608"}


id: FYPO:0002734
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115274],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115298],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[115104,115105,115106],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"FYPO:0000671"},{"annotations":[115475,115417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115387,115192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115323],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115291,115118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"},{"annotations":[115275],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115444,115445,115443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"},{"annotations":[115287,115288],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle process normally. A cell cycle process is any of the processes that form part of the cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["PomBase:mah","GO:0022402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00871":null,"SJAG_01143":null,"SJAG_01330":null,"SJAG_01956":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03351":null,"SJAG_03449":null,"SJAG_03575":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null,"SJAG_04522":null},"genotype_count":21,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_02392","SJAG_01143","SJAG_00871","SJAG_04522","SJAG_00118","SJAG_04464","SJAG_04280"],"name":"abnormal cell cycle process","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04522","SJAG_03449","SJAG_01143","SJAG_03575","SJAG_00118","SJAG_04284","SJAG_01330","SJAG_04464","SJAG_02392","SJAG_03596","SJAG_02592","SJAG_01956","SJAG_04332","SJAG_03351"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","rga4delta","mad2delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","nup61delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","sty1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0002734","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003738":null,"FYPO:0004318":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 5","termid":"PBO:0048714"}


id: PBO:0049097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 155","termid":"PBO:0049097"}


id: GO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation","termid":"GO:0050678"}


id: PBO:0004786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LYHRT homolog","termid":"PBO:0004786"}


id: PBO:0069008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 252, pseudogene","termid":"PBO:0069008"}


id: PR:O74356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25D12.06 gene.","definition_xrefs":["UniProtKB:O74356","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C25D12.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.06","synonyms":[{"name":"Spom972h-SPBC25D12.06","type":"exact"}],"termid":"PR:O74356"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: GO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"socket cell differentiation","termid":"GO:0090437"}


id: GO:0014805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle adaptation","synonyms":[{"name":"smooth muscle plasticity","type":"related"}],"termid":"GO:0014805"}


id: PBO:0065120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C zeta","termid":"PBO:0065120"}


id: GO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of proteins that interacts with delta-DNA polymerase, promoting elongation. In humans it is a heteropentamer of subunits of 140/145, 40, 38, 37 and 36.5 kDa, which form a complex with the proliferating cell nuclear antigen (PCNA) in the presence of ATP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-DNA polymerase cofactor complex (obsolete GO:0005660)","synonyms":[{"name":"delta DNA polymerase cofactor complex","type":"exact"},{"name":"delta-DNA polymerase cofactor complex","type":"exact"}],"termid":"GO:0005660"}


id: GO:0140831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-asparagine(out) + Na+(out) = H+(out) + L-asparagine(in) + Na+(in).","definition_xrefs":["PMID:11742981","PMID:10619430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine transmembrane transporter activity","termid":"GO:0015182"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-asparagine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71131"],"termid":"GO:0140831"}


id: PBO:0062997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 3","termid":"PBO:0062997"}


id: GO:0090545
data:
  {"annotated_genes":["SJAG_03844","SJAG_03982","SJAG_00934","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109348,104225,88174,108162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.","definition_xrefs":["GOC:krc","GOC:tb","PMID:17350655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"CHD-type complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090545","terms_by_termid":{"GO:0070824":null}}


id: PBO:0054808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2221","termid":"PBO:0054808"}


id: GO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"negatively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor recycling","synonyms":[{"name":"down regulation of receptor recycling","type":"exact"},{"name":"down-regulation of receptor recycling","type":"exact"},{"name":"downregulation of receptor recycling","type":"exact"},{"name":"inhibition of receptor recycling","type":"narrow"}],"termid":"GO:0001920"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: PBO:0073195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin L","termid":"PBO:0073195"}


id: FYPO:0003172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur, and the cell does not form a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic M phase without septation","synonyms":[{"name":"abnormal cell cycle arrest in mitotic M phase without cytokinesis","type":"related"},{"name":"abnormal cell cycle arrest in mitotic M phase without septation, normal cell size","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase without septation","type":"exact"},{"name":"abnormal nuclear division arrest without septation (normal cell length)","type":"exact"}],"termid":"FYPO:0003172"}


id: PBO:0056589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor","termid":"PBO:0056589"}


id: PBO:0059577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 4","termid":"PBO:0059577"}


id: PBO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX30 divergent transcript","termid":"PBO:0075291"}


id: PBO:0067061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 83, pseudogene","termid":"PBO:0067061"}


id: PBO:0054461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1858","termid":"PBO:0054461"}


id: PBO:0087747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO and TREX complexes; THO connects transcription elongation and mitotic recombination, and TREX is recruited to activated genes and couples transcription to mRNA export; involved in telomere maintenance","termid":"PBO:0087747"}


id: PATO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000676 relative temperature value (obsolete PATO:0000676)","termid":"PATO:0000676"}


id: PBO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 2","termid":"PBO:0048731"}


id: SO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Plastid rRNA is an RNA component of the small or large subunits of plastid (such as chloroplast) ribosomes.","definition_xrefs":["PMID:3044395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_rRNA","synonyms":[{"name":"plastid rRNA","type":"exact"}],"termid":"SO:0002346"}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: FYPO:0004423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of threonine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation","termid":"FYPO:0004422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein threonine phosphorylation","synonyms":[{"name":"normal peptidyl-threonine phosphorylation","type":"exact"}],"termid":"FYPO:0004423"}


id: PBO:0039413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 16","termid":"PBO:0039413"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: FYPO:0001748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nickel import","termid":"FYPO:0001747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased nickel import","synonyms":[{"name":"decreased cellular nickel import","type":"exact"},{"name":"decreased nickel cation import","type":"exact"},{"name":"decreased nickel import across plasma membrane","type":"exact"},{"name":"decreased nickel import during mitotic cell cycle","type":"related"},{"name":"decreased nickel import during vegetative growth","type":"exact"},{"name":"decreased nickel import into cell","type":"exact"},{"name":"decreased nickel ion import","type":"exact"},{"name":"reduced nickel import","type":"exact"}],"termid":"FYPO:0001748"}


id: PBO:0072864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 1","termid":"PBO:0072864"}


id: PBO:0054957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2371","termid":"PBO:0054957"}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: PBO:0043719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 7","termid":"PBO:0043719"}


id: PR:000044701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044701"}


id: PBO:0082125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid trehalase required for utilization of extracellular trehalose; involved in intracellular trehalose degradation during growth recovery after saline stress","termid":"PBO:0082125"}


id: GO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.","definition_xrefs":["PMID:11526084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell hair","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"imaginal disc-derived wing hair","type":"narrow"},{"name":"non-sensory hair","type":"exact"}],"termid":"GO:0070451"}


id: SO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glycyl tRNA (SO:0000263).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine_tRNA_primary_transcript","synonyms":[{"name":"glycine tRNA primary transcript","type":"exact"}],"termid":"SO:0000218"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: PR:Q09671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C5H10.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.10","synonyms":[{"name":"Old yellow enzyme homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC5H10.10","type":"exact"}],"termid":"PR:Q09671"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: CHEBI:30812
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron dichloride","termid":"CHEBI:30812"}


id: PBO:0031540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascus_development","termid":"PBO:0031540"}


id: PBO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit (predicted)","termid":"PBO:0002599"}


id: PBO:0046386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOLA2 divergent transcript","termid":"PBO:0046386"}


id: PBO:0081869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 808","termid":"PBO:0081869"}


id: PBO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 5","termid":"PBO:0043877"}


id: PBO:0059357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 1","termid":"PBO:0059357"}


id: GO:0035842
data:
  {"annotated_genes":["SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106824],"is_not":false,"summary":null,"term":"GO:0035842"}]},"cv_name":"cellular_component","definition":"A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs, which is part of a cell that has activated bipolar cell growth (i.e. in which new end take-off, NETO, has taken place). For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.","definition_xrefs":["GOC:mah","GOC:expert_jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"old growing cell tip","termid":"GO:0035840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old cell tip after activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"post-NETO old cell end","type":"exact"},{"name":"post-NETO old cell tip","type":"exact"},{"name":"post-new end take-off old cell tip","type":"exact"}],"termid":"GO:0035842","terms_by_termid":{"GO:0035842":null}}


id: PATO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000007 relative activity (obsolete PATO:0000007)","termid":"PATO:0000007"}


id: GO:0051726
data:
  {"annotated_genes":["SJAG_04776","SJAG_01084","SJAG_04666","SJAG_01837","SJAG_03486","SJAG_03720","SJAG_02026","SJAG_01429","SJAG_02576","SJAG_02104","SJAG_03592","SJAG_02481","SJAG_00486","SJAG_00460","SJAG_02838","SJAG_00666","SJAG_05978","SJAG_00266","SJAG_00600","SJAG_01605","SJAG_01311","SJAG_03927","SJAG_04943","SJAG_04551","SJAG_05290","SJAG_03624","SJAG_00680","SJAG_05288","SJAG_04486","SJAG_02392","SJAG_03689","SJAG_04771","SJAG_02162","SJAG_00364","SJAG_01010","SJAG_02723","SJAG_01345","SJAG_02514","SJAG_04287","SJAG_01068","SJAG_01863","SJAG_02074","SJAG_02342","SJAG_01188","SJAG_04468","SJAG_02169","SJAG_01210","SJAG_04457","SJAG_03942","SJAG_01787","SJAG_02404","SJAG_00640","SJAG_03327","SJAG_06592","SJAG_03525","SJAG_01044","SJAG_03073","SJAG_00993","SJAG_00082","SJAG_01114","SJAG_03353","SJAG_03529","SJAG_02058","SJAG_00071","SJAG_02645","SJAG_04394","SJAG_03631","SJAG_03699","SJAG_01401","SJAG_01050","SJAG_02536","SJAG_01801","SJAG_00318","SJAG_04280","SJAG_04332","SJAG_03356","SJAG_01297","SJAG_02771","SJAG_00214","SJAG_01113","SJAG_04126","SJAG_04597","SJAG_01679","SJAG_06638","SJAG_03048","SJAG_03581","SJAG_04464","SJAG_04671","SJAG_00991","SJAG_03887","SJAG_02807","SJAG_00244","SJAG_00169","SJAG_00145","SJAG_01716","SJAG_03342","SJAG_02098","SJAG_00457","SJAG_00996","SJAG_00439","SJAG_04968","SJAG_04853","SJAG_03501","SJAG_05373","SJAG_04682","SJAG_03350","SJAG_05153","SJAG_02336","SJAG_02621","SJAG_00100","SJAG_00229","SJAG_04999","SJAG_03371","SJAG_00526","SJAG_01515","SJAG_04140","SJAG_03575","SJAG_00823","SJAG_01000","SJAG_03026","SJAG_03508","SJAG_03704","SJAG_04509","SJAG_00369","SJAG_03067","SJAG_02712","SJAG_03692","SJAG_01825","SJAG_00883","SJAG_02332","SJAG_01790","SJAG_01855","SJAG_03591","SJAG_01680","SJAG_03936","SJAG_01901","SJAG_04259","SJAG_00840","SJAG_03309","SJAG_03695","SJAG_01805","SJAG_00327","SJAG_01456","SJAG_01076","SJAG_00216","SJAG_03681","SJAG_02498","SJAG_04573","SJAG_03126","SJAG_05329","SJAG_02266","SJAG_02451","SJAG_01708","SJAG_04412","SJAG_02858","SJAG_02380","SJAG_01082","SJAG_03898","SJAG_00429","SJAG_00514","SJAG_01205","SJAG_03854","SJAG_03160","SJAG_00845","SJAG_04813","SJAG_00117","SJAG_01386","SJAG_01677","SJAG_06270","SJAG_05346","SJAG_01956","SJAG_02563","SJAG_03602","SJAG_01146","SJAG_04455","SJAG_04884","SJAG_01118","SJAG_03438","SJAG_01873","SJAG_00623","SJAG_00256","SJAG_00987","SJAG_02592","SJAG_01330","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[86474,91257,105111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[111948,110323,95668,103296,104318,99971,108017,109845,86847],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[110549,102373],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[87534,102677,112110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[85202,112111,76907,110313,102678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[102374,97874,112717],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[94784,96213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[98368,96214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[97913,86475,109187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[90509,86127,96610,112053,97509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[87894,112284,105383,102679,95273,98440,78943,89663,90043,110314,112054,113729,107257,110520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[112847,113302,88629,96611,95274,90066,99400,105384,87535,90044,108091,102680,85260,112112,113137,95440,103903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[104952,97698,85090,111950,98441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[105741,87414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[91952,112055,94528,90640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[105385,87895,113730,96612,84703,107787,97127,102681,86344,90046,113056,85261,87536,110315,95441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[86570,96933,97597,107788,102682,90641,88630,92117,112114,98442,87537,112113,108093,85307,85262,113138,95275,103736,84704,95442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[112720,111597,86849,105974,109849,97875,95517,102375,110552],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[107258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[101863,102710,105329,100510,114372,102024,98445],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[95748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010974"},{"annotations":[88938,98448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[95643,114098,112032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"},{"annotations":[104953,87840,85091,88260,89422,94962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[89306,104636,102711,90469,112056,91954,110521,89664,97071,86128,100565,103076,89019,108538,110316,107881,107490,107620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[107621,112057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[107259,112434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[94785],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[98449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[104954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045930"},{"annotations":[112892,104955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[111382,102411,102316,87841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[98224,98450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902413"},{"annotations":[104956,93871,98451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[111598,102376],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[99359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90300],"is_not":false,"rel_names":["negatively_regulates","positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[98452],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[104037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[101091,95669,95749,91747,103298,86851,103608,89021,89561,88939,97350,106237,111951,87832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[103471,102643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[98369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[108018,112058,101232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[114234,112533],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0140648"},{"annotations":[108095,99402,113304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[89854,86129,98455,108019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[102717,101867,97700,102025,113106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[99570,97837,104638,107260,90511,92424,90472,88239,89905,84217,94529,87834,95084,90642,112534,84208,103299,112722,106407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[84014,97460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[85203,102683,98456,112286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[109850],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[115085,115086,103116,91259,93148,98370,98458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051446"},{"annotations":[98459,104420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[91260],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[86130,90512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[83693,90681,90513,106587,109423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[98460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[112724],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[112725,98461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[103473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"},{"annotations":[89906,86131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[86893,91957,99782,106830,115307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[85378,103110,109424,111512,113910,102439,89907,86002,101233,88520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[98462,89908,96215,107431,110324,110821,98188,93796],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[112726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[86132,89909,98463,107261,112727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[95690,93797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[90514,86133],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[107491],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[90516,83694,88521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[85204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[83676,88522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[83695,86134,106588,89911,98467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[93292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[77030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031991"},{"annotations":[88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"},{"annotations":[102412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901987"},{"annotations":[105113,100969,98468,97701,90644],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0110044"},{"annotations":[86004,84057,77031,88525,90682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032955"},{"annotations":[107075,113180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007096"},{"annotations":[102026,87844,113108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000045"},{"annotations":[98471,108022,107262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010389"},{"annotations":[89987,106251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[98473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"},{"annotations":[97409],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[100402,85946,90477,88240,89391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051445"},{"annotations":[104421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901993"},{"annotations":[93040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"},{"annotations":[89913,90478,115477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[112635,101067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007346"},{"annotations":[90301],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[86136,114701,83696,99571,112728,109426,105277,113544,111513,87944,85948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902412"},{"annotations":[84016,97462,107432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902472"},{"annotations":[113911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140279"},{"annotations":[95443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903466"},{"annotations":[106987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007088"},{"annotations":[99749,89941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905557"},{"annotations":[112729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033047"},{"annotations":[107076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[107077],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[111099],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0110162"},{"annotations":[86006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"},{"annotations":[112730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"},{"annotations":[112287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"},{"annotations":[97702,102028,87846,111384,104958,111952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate or extent of progression through the cell cycle.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell cycle","termid":"GO:0007049"}],"gene_count":185,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00082":null,"SJAG_00100":null,"SJAG_00117":null,"SJAG_00145":null,"SJAG_00169":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00229":null,"SJAG_00244":null,"SJAG_00256":null,"SJAG_00266":null,"SJAG_00318":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00429":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00460":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00666":null,"SJAG_00680":null,"SJAG_00823":null,"SJAG_00840":null,"SJAG_00845":null,"SJAG_00883":null,"SJAG_00987":null,"SJAG_00991":null,"SJAG_00993":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01050":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01345":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01515":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01716":null,"SJAG_01787":null,"SJAG_01790":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01863":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_01956":null,"SJAG_02026":null,"SJAG_02058":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02162":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02498":null,"SJAG_02514":null,"SJAG_02536":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02621":null,"SJAG_02645":null,"SJAG_02712":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02807":null,"SJAG_02838":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03327":null,"SJAG_03342":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03356":null,"SJAG_03371":null,"SJAG_03438":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03525":null,"SJAG_03529":null,"SJAG_03575":null,"SJAG_03581":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03689":null,"SJAG_03692":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03704":null,"SJAG_03720":null,"SJAG_03854":null,"SJAG_03887":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03936":null,"SJAG_03942":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04412":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04486":null,"SJAG_04509":null,"SJAG_04551":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04671":null,"SJAG_04682":null,"SJAG_04699":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04813":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04943":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05153":null,"SJAG_05288":null,"SJAG_05290":null,"SJAG_05329":null,"SJAG_05346":null,"SJAG_05373":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_06592":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"secondary_identifiers":["GO:0071850","GO:0071157","GO:0071158","GO:0000074","GO:0071156","GO:0007050"],"synonyms":[{"name":"arrest of mitotic cell cycle progression","type":"narrow"},{"name":"cell cycle arrest","type":"narrow"},{"name":"cell cycle modulation","type":"exact"},{"name":"cell cycle regulation","type":"exact"},{"name":"cell cycle regulator","type":"related"},{"name":"control of cell cycle progression","type":"exact"},{"name":"mitotic cell cycle arrest","type":"narrow"},{"name":"modulation of cell cycle progression","type":"exact"},{"name":"negative regulation of cell cycle arrest","type":"narrow"},{"name":"positive regulation of cell cycle arrest","type":"narrow"},{"name":"regulation of cell cycle arrest","type":"narrow"},{"name":"regulation of cell cycle progression","type":"exact"},{"name":"regulation of progression through cell cycle","type":"exact"},{"name":"tumor suppressor","type":"related"}],"termid":"GO:0051726","terms_by_termid":{"GO:0000077":null,"GO:0001100":null,"GO:0007088":null,"GO:0007089":null,"GO:0007091":null,"GO:0007094":null,"GO:0007095":null,"GO:0007096":null,"GO:0007346":null,"GO:0010389":null,"GO:0010845":null,"GO:0010846":null,"GO:0010971":null,"GO:0010972":null,"GO:0010974":null,"GO:0031030":null,"GO:0031031":null,"GO:0031536":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031991":null,"GO:0032215":null,"GO:0032888":null,"GO:0032955":null,"GO:0033047":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0045128":null,"GO:0045841":null,"GO:0045842":null,"GO:0045875":null,"GO:0045930":null,"GO:0051445":null,"GO:0051446":null,"GO:0051447":null,"GO:0051598":null,"GO:0051728":null,"GO:0060236":null,"GO:0062123":null,"GO:0062209":null,"GO:0070317":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090266":null,"GO:0090267":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:0140279":null,"GO:0140281":null,"GO:0140429":null,"GO:0140499":null,"GO:0140648":null,"GO:0140748":null,"GO:1900087":null,"GO:1901673":null,"GO:1901970":null,"GO:1901987":null,"GO:1901993":null,"GO:1902103":null,"GO:1902412":null,"GO:1902413":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902472":null,"GO:1902845":null,"GO:1902846":null,"GO:1903024":null,"GO:1903380":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903472":null,"GO:1903473":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905287":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905406":null,"GO:1905412":null,"GO:1905557":null,"GO:1905757":null,"GO:1905758":null,"GO:1905824":null,"GO:1990949":null,"GO:1990950":null,"GO:2000045":null,"GO:2000134":null,"GO:2000816":null}}


id: FYPO:0005508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transport of a substance from the plasma membrane to the vacuole is abnormal. Transport normally occurs in two stages, plasma membrane to endosome followed by endosome to vacuole transport.","definition_xrefs":["PomBase:mah","PMID:26749213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal plasma membrane to vacuole transport","synonyms":[{"name":"abnormal plasma membrane to vacuole protein transport","type":"narrow"}],"termid":"FYPO:0005508"}


id: PBO:0081398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF236 divergent transcript","termid":"PBO:0081398"}


id: PBO:0027176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_telomeric_heterochromatin_assembly","termid":"PBO:0027176"}


id: PBO:0066025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 6","termid":"PBO:0066025"}


id: PBO:0090180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sly1","termid":"PBO:0090180"}


id: PR:Q10198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein NDC80 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03670","PANTHER:PTHR10643:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein ndc80 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.03","secondary_identifiers":["UniProtKB:Q10198"],"synonyms":[{"name":"NMS complex subunit ndc80 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDC80","type":"exact"}],"termid":"PR:Q10198"}


id: MOD:02070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}


id: PATO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased volume","synonyms":[{"name":"high volume","type":"exact"},{"name":"large volume","type":"related"}],"termid":"PATO:0000595"}


id: PATO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000590 relative thickness value (obsolete PATO:0000590)","termid":"PATO:0000590"}


id: PBO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit F (predicted)","termid":"PBO:0004717"}


id: PBO:0030090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dipeptide_nitrogen_source","termid":"PBO:0030090"}


id: PBO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0030346"}


id: GO:0097586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt4p.","definition_xrefs":["GOC:bhm","GOC:jd","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p homodimer complex","synonyms":[{"name":"Pmt4p-Pmt4p complex","type":"narrow"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p dimer","type":"exact"},{"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p-Pmt4p dimer complex","type":"exact"}],"termid":"GO:0097586"}


id: PBO:0056583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter dominant negative subunit beta","termid":"PBO:0056583"}


id: PBO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress","termid":"PBO:0031268"}


id: PBO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 3","termid":"PBO:0046055"}


id: PBO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase (predicted)","termid":"PBO:0001224"}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018574"}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: PBO:0002380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0002380"}


id: PBO:0060237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene like 2","termid":"PBO:0060237"}


id: SO:0001670
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory promoter element that is distal from the TSS.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal_promoter_element","synonyms":[{"name":"distal promoter element","type":"related"}],"termid":"SO:0001670"}


id: PBO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3","termid":"PBO:0000305"}


id: PBO:0075993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP1B antisense RNA 1","termid":"PBO:0075993"}


id: GO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of amylopectin stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amylopectin","termid":"GO:0044591"}


id: FYPO:0002003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished","type":"exact"},{"name":"abolished transcription factor binding to promoter region","type":"related"}],"termid":"FYPO:0002003"}


id: GO:0015911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell, across the plasma membrane and into the cytosol. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"long-chain fatty acid import across plasma membrane","synonyms":[{"name":"plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0015911"}


id: PBO:0011458
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Changed Amiloride Resistance","termid":"PBO:0011458"}


id: GO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a myeloid leukocyte resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte activation","synonyms":[{"name":"myeloid leucocyte activation","type":"exact"}],"termid":"GO:0002274"}


id: MOD:00320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-glutamic acid residue by a thioether bond to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["PubMed:11555656","RESID:AA0315","PubMed:11717396","ChEBI:20293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(S-L-cysteinyl)-L-glutamic acid","synonyms":[{"name":"(2S,3S,7R)-2,7-diamino-4-carboxy-5-thiaoctanedioic acid","type":"exact"},{"name":"(2S,4S)-2-amino-4-[(R)-2-amino-2-carboxyethyl]sulfanylpentanedioic acid","type":"exact"},{"name":"4-(L-cystein-S-yl)-L-glutamic acid","type":"exact"},{"name":"CROSSLNK 4-cysteinyl-glutamic acid (Cys-Glu)","type":"exact"}],"termid":"MOD:00320"}


id: PBO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hir protein binding region","termid":"PBO:0005580"}


id: PBO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv46 (predicted)","termid":"PBO:0000208"}


id: PBO:0055041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2456","termid":"PBO:0055041"}


id: PBO:0067967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 269","termid":"PBO:0067967"}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction by virus of host cell-cell fusion","synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: GO:0098564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a trans-Golgi network transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle lumen","termid":"GO:0098564"}


id: PBO:0054923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2337","termid":"PBO:0054923"}


id: PBO:0053571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 589","termid":"PBO:0053571"}


id: GO:0110129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex formed by the association of an HP1 protein with a SHREC complex. The SHREC2 complex is required for deacetylation of H3K14, and mediates transcriptional gene silencing by limiting RNA polymerase II access to heterochromatin. In fission yeast, the complex contains the SHREC subunits Clr1, Clr2, Clr3, and Mit1, and the HP1 protein Chp2.","definition_xrefs":["PMID:19111658","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SHREC2 complex (obsolete GO:0110129)","termid":"GO:0110129"}


id: PBO:0112001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh2","termid":"PBO:0112001"}


id: PBO:0110031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 3","termid":"PBO:0110031"}


id: PBO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA papillary thyroid carcinoma tumor suppressor","termid":"PBO:0110039"}


id: PATO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a substance by virtue of the radiation energy \\\"deposited\\\" in a kilogram of a substance.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation absorbed dose","termid":"PATO:0001745"}


id: PBO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 1","termid":"PBO:0047732"}


id: FYPO:0008043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the nucleus is increased during stationary phase.","definition_xrefs":["PMID:36174923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleus during stationary phase","termid":"FYPO:0008043"}


id: PBO:0044703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 4","termid":"PBO:0044703"}


id: GO:0014888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which striated muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle adaptation","synonyms":[{"name":"striated muscle plasticity","type":"related"}],"termid":"GO:0014888"}


id: PBO:0041990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34","termid":"PBO:0041990"}


id: PBO:0042155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 16","termid":"PBO:0042155"}


id: GO:0008270
data:
  {"annotated_genes":["SJAG_03225","SJAG_00341","SJAG_02569","SJAG_06597","SJAG_00483","SJAG_02648","SJAG_03142","SJAG_02298","SJAG_04129","SJAG_05264","SJAG_03370","SJAG_00451","SJAG_03183","SJAG_00552","SJAG_02299","SJAG_03984","SJAG_01997","SJAG_00237","SJAG_04374","SJAG_01507","SJAG_00209","SJAG_00119","SJAG_01772","SJAG_03324","SJAG_01179","SJAG_06576","SJAG_05243","SJAG_02539","SJAG_00037","SJAG_04414","SJAG_01321","SJAG_04043","SJAG_05274","SJAG_01212","SJAG_01253","SJAG_00727","SJAG_02575","SJAG_02709","SJAG_01266","SJAG_00644","SJAG_02589","SJAG_04373","SJAG_00792","SJAG_05012","SJAG_04990","SJAG_02851","SJAG_02290","SJAG_03254","SJAG_00439","SJAG_03771","SJAG_00561","SJAG_04249","SJAG_03006","SJAG_04205","SJAG_00500","SJAG_01797","SJAG_04407","SJAG_00475","SJAG_02668","SJAG_03112","SJAG_00249","SJAG_02007","SJAG_01313","SJAG_02138","SJAG_04336","SJAG_00181","SJAG_00498","SJAG_04726","SJAG_00188","SJAG_02752","SJAG_01765","SJAG_05273","SJAG_02048","SJAG_04915","SJAG_02963","SJAG_00386","SJAG_02583","SJAG_03346","SJAG_03968","SJAG_02746","SJAG_01992","SJAG_00577","SJAG_05242","SJAG_00406","SJAG_01088","SJAG_01280","SJAG_01281","SJAG_03983","SJAG_05344","SJAG_02169","SJAG_03071","SJAG_06611","SJAG_03051","SJAG_03029","SJAG_02730","SJAG_03886","SJAG_00989","SJAG_04410","SJAG_03196","SJAG_03618","SJAG_00509","SJAG_01533","SJAG_02003","SJAG_03613","SJAG_01572","SJAG_03615","SJAG_02319","SJAG_04048","SJAG_04063","SJAG_06599","SJAG_03761","SJAG_01450","SJAG_00926","SJAG_02347","SJAG_00204","SJAG_01075","SJAG_02629","SJAG_02043","SJAG_03175","SJAG_04538","SJAG_00865","SJAG_05234","SJAG_03022","SJAG_03538","SJAG_06642","SJAG_02908","SJAG_04574","SJAG_03275","SJAG_00742","SJAG_00163","SJAG_02691","SJAG_05173","SJAG_00923","SJAG_05343","SJAG_03373","SJAG_04106","SJAG_01310","SJAG_01414","SJAG_02503","SJAG_04448","SJAG_03599","SJAG_01511","SJAG_01637","SJAG_05118","SJAG_03918","SJAG_04712","SJAG_04619","SJAG_02938","SJAG_04966","SJAG_01593","SJAG_03326","SJAG_02689","SJAG_04189","SJAG_03519","SJAG_01740","SJAG_05353","SJAG_01673","SJAG_03090","SJAG_03286","SJAG_05345","SJAG_00166","SJAG_05236","SJAG_01560","SJAG_06639","SJAG_03976","SJAG_00758","SJAG_03831","SJAG_04213","SJAG_03695","SJAG_04434","SJAG_03657","SJAG_01776","SJAG_01498","SJAG_03752","SJAG_01457","SJAG_03665","SJAG_03974","SJAG_05337","SJAG_03005","SJAG_01854","SJAG_05105","SJAG_00072","SJAG_02956","SJAG_01165","SJAG_00664","SJAG_03428","SJAG_02052","SJAG_02406","SJAG_02954","SJAG_01930","SJAG_01194","SJAG_03697","SJAG_03153","SJAG_04425","SJAG_04991","SJAG_04845","SJAG_04151","SJAG_03689","SJAG_02096","SJAG_04533","SJAG_02349","SJAG_04353","SJAG_04429","SJAG_03430","SJAG_02447","SJAG_00111","SJAG_02521","SJAG_00555","SJAG_02149","SJAG_01372","SJAG_02461"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57123,57445,57895,58295,58524,60985,61352,65507,65534,67621,68050,70491,74069,83555,83755,84186,84474,84561,84616,84652,84729,84765,84784,84794,85047,85185,85338,85440,85479,85660,85681,85733,85857,85889,85941,86029,86313,86339,86380,86436,86679,86717,86855,87091,87642,87743,87747,87973,88081,88145,88571,88743,88759,88842,88843,88844,88845,89118,89413,89460,89671,89827,90175,90243,90313,90455,90619,91112,91828,91918,92149,92618,92702,92790,92886,93032,93633,93634,93635,93636,93637,93943,94410,94601,94624,94636,94667,95344,95480,95486,95586,96204,96335,96747,97263,97383,97400,97401,97536,97566,97778,97858,98291,98302,98313,98413,98660,98877,99109,99492,99507,99561,99638,99656,99935,100315,100433,100523,100805,101071,101105,101180,101296,101354,101366,101690,101696,101788,101789,101815,101854,101880,101881,101955,102827,102887,102935,103017,103423,103650,103937,104073,104087,104121,104444,104453,104945,105297,105575,105831,106024,106035,106275,106299,106565,106743,106933,106949,106965,107060,107124,107197,107760,108039,108147,108876,109020,109021,109022,109023,109024,109330,109341,109368,109459,109567,109636,109729,109749,109778,110064,110087,110088,110274,110299,110381,110506,110634,110667,110668,110702,111080,111190,111308,111592,111678,111708,111735,111775,112044,112129,112265,112340,112522,112647,112660,112753,112754,113232,113307,113319,113786,114048,114360,114448,114728,114849,114855],"is_not":false,"summary":null,"term":"GO:0008270"}]},"cv_name":"molecular_function","definition":"Binding to a zinc ion (Zn).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":211,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00072":null,"SJAG_00111":null,"SJAG_00119":null,"SJAG_00163":null,"SJAG_00166":null,"SJAG_00181":null,"SJAG_00188":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00237":null,"SJAG_00249":null,"SJAG_00341":null,"SJAG_00386":null,"SJAG_00406":null,"SJAG_00439":null,"SJAG_00451":null,"SJAG_00475":null,"SJAG_00483":null,"SJAG_00498":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00555":null,"SJAG_00561":null,"SJAG_00577":null,"SJAG_00644":null,"SJAG_00664":null,"SJAG_00727":null,"SJAG_00742":null,"SJAG_00758":null,"SJAG_00792":null,"SJAG_00865":null,"SJAG_00923":null,"SJAG_00926":null,"SJAG_00989":null,"SJAG_01075":null,"SJAG_01088":null,"SJAG_01165":null,"SJAG_01179":null,"SJAG_01194":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01266":null,"SJAG_01280":null,"SJAG_01281":null,"SJAG_01310":null,"SJAG_01313":null,"SJAG_01321":null,"SJAG_01372":null,"SJAG_01414":null,"SJAG_01450":null,"SJAG_01457":null,"SJAG_01498":null,"SJAG_01507":null,"SJAG_01511":null,"SJAG_01533":null,"SJAG_01560":null,"SJAG_01572":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01673":null,"SJAG_01740":null,"SJAG_01765":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01797":null,"SJAG_01854":null,"SJAG_01930":null,"SJAG_01992":null,"SJAG_01997":null,"SJAG_02003":null,"SJAG_02007":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02096":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02169":null,"SJAG_02290":null,"SJAG_02298":null,"SJAG_02299":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02349":null,"SJAG_02406":null,"SJAG_02447":null,"SJAG_02461":null,"SJAG_02503":null,"SJAG_02521":null,"SJAG_02539":null,"SJAG_02569":null,"SJAG_02575":null,"SJAG_02583":null,"SJAG_02589":null,"SJAG_02629":null,"SJAG_02648":null,"SJAG_02668":null,"SJAG_02689":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02746":null,"SJAG_02752":null,"SJAG_02851":null,"SJAG_02908":null,"SJAG_02938":null,"SJAG_02954":null,"SJAG_02956":null,"SJAG_02963":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03022":null,"SJAG_03029":null,"SJAG_03051":null,"SJAG_03071":null,"SJAG_03090":null,"SJAG_03112":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03175":null,"SJAG_03183":null,"SJAG_03196":null,"SJAG_03225":null,"SJAG_03254":null,"SJAG_03275":null,"SJAG_03286":null,"SJAG_03324":null,"SJAG_03326":null,"SJAG_03346":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03428":null,"SJAG_03430":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03599":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03665":null,"SJAG_03689":null,"SJAG_03695":null,"SJAG_03697":null,"SJAG_03752":null,"SJAG_03761":null,"SJAG_03771":null,"SJAG_03831":null,"SJAG_03886":null,"SJAG_03918":null,"SJAG_03968":null,"SJAG_03974":null,"SJAG_03976":null,"SJAG_03983":null,"SJAG_03984":null,"SJAG_04043":null,"SJAG_04048":null,"SJAG_04063":null,"SJAG_04106":null,"SJAG_04129":null,"SJAG_04151":null,"SJAG_04189":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04249":null,"SJAG_04336":null,"SJAG_04353":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04414":null,"SJAG_04425":null,"SJAG_04429":null,"SJAG_04434":null,"SJAG_04448":null,"SJAG_04533":null,"SJAG_04538":null,"SJAG_04574":null,"SJAG_04619":null,"SJAG_04712":null,"SJAG_04726":null,"SJAG_04845":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_04991":null,"SJAG_05012":null,"SJAG_05105":null,"SJAG_05118":null,"SJAG_05173":null,"SJAG_05234":null,"SJAG_05236":null,"SJAG_05242":null,"SJAG_05243":null,"SJAG_05264":null,"SJAG_05273":null,"SJAG_05274":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_05353":null,"SJAG_06576":null,"SJAG_06597":null,"SJAG_06599":null,"SJAG_06611":null,"SJAG_06639":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"zinc ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"Zn binding","type":"exact"},{"name":"zinc binding","type":"exact"}],"termid":"GO:0008270","terms_by_termid":{"GO:0008270":null}}


id: PBO:0080848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YBX2 pseudogene 1","termid":"PBO:0080848"}


id: PBO:0017710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase involved in depalmitoylation (predicted)","termid":"PBO:0017710"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11807545","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: GO:0103055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A15 + 2-oxoglutarate + O2 = gibberellin A24 + succinate + carbon dioxide + H2O.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberelli A15, 2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["RHEA:60780","MetaCyc:RXN1F-163"],"termid":"GO:0103055"}


id: GO:0120275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral blood circulation","synonyms":[{"name":"cerebrum blood circulation","type":"exact"},{"name":"telencephelon blood circulation","type":"exact"}],"termid":"GO:0120275"}


id: PBO:0057935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3661","termid":"PBO:0057935"}


id: FYPO:0005755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-beta-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PMID:11514435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased (1->3)-beta-D-glucan level","termid":"FYPO:0007949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased (1->3)-beta-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-beta-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-beta-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005755"}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: PBO:0040935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 6","termid":"PBO:0040935"}


id: PBO:0035926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_cell","termid":"PBO:0035926"}


id: PBO:0065330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 54","termid":"PBO:0065330"}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: RO:HOM0000005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves homologous underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_parallelism_relationship_with","synonyms":[{"name":"parallel evolution","type":"exact"}],"termid":"RO:HOM0000005"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: GO:0006500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a palmitoyl group to the N-terminal amino acid residue of a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein lipidation","termid":"GO:0006498"},{"relation_name":"is_a","term_name":"protein palmitoylation","termid":"GO:0018345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"N-terminal protein palmitoylation","termid":"GO:0006500"}


id: PBO:0061770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OBI1 antisense RNA 1","termid":"PBO:0061770"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: PBO:0058010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3936 host gene","termid":"PBO:0058010"}


id: PBO:0049183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine rich extracellular protein 1","termid":"PBO:0049183"}


id: PBO:0043639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 2","termid":"PBO:0043639"}


id: GO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective autophagy process in which a peroxisome is degraded by macroautophagy.","definition_xrefs":["PMID:16973210","GOC:autophagy","PMID:12914914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"},{"relation_name":"is_a","term_name":"autophagy of peroxisome","termid":"GO:0030242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"pexophagy","synonyms":[{"name":"macropexophagy","type":"exact"}],"termid":"GO:0000425"}


id: GO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing a cleistothecium, a closed sexual fruiting body that contains ascospores in linear asci. Cleistothecia are present in some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["PMID:28889020","PMID:20348388","PMID:30410052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium formation","termid":"GO:0062248"}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: PBO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleic_acid_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030885"}


id: PBO:0086665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by expression profiling and mass spectrometry; SWAT-GFP fusion protein localizes to the nucleus","termid":"PBO:0086665"}


id: FYPO:0001322
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000356"},{"annotations":[115100,115095,115193,115102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003779"},{"annotations":[115581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115559,115557,115568,115571,115556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"},{"annotations":[115562,115558,115567,115570,115555,115554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001556"},{"annotations":[115606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115097,115099,115101,115098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004890"},{"annotations":[115200],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"},{"annotations":[115275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"},{"annotations":[115287,115288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, morphology, or other physical characteristic of a cell part is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00426":null,"SJAG_01143":null,"SJAG_01745":null,"SJAG_01834":null,"SJAG_01906":null,"SJAG_02392":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03940":null,"SJAG_04280":null,"SJAG_04464":null,"SJAG_04522":null,"SJAG_04697":null,"SJAG_04703":null},"genotype_count":21,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143","SJAG_04522","SJAG_04280"],"name":"abnormal subcellular component during vegetative growth","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_02392","SJAG_01834","SJAG_01745","SJAG_04703","SJAG_00426","SJAG_03449","SJAG_03940","SJAG_02763","SJAG_04697","SJAG_04464","SJAG_04522","SJAG_00118","SJAG_01143"],"single_locus_genotype_uniquenames":["lem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","pom152delta","nem2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","nem1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","ned1delta","mid1delta","pom1delta","gms1delta","for3delta"],"synonyms":[{"name":"abnormal subcellular component during mitotic cell cycle","type":"related"},{"name":"abnormal subcellular structure during vegetative growth","type":"related"}],"termid":"FYPO:0001322","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0001369":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO:0003727":null,"FYPO:0003779":null,"FYPO:0003976":null,"FYPO:0004890":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0065845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 1","termid":"PBO:0065845"}


id: GO:1903886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:TermGenie","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 20 production","termid":"GO:1903884"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"activation of C-C motif chemokine 20 production","type":"narrow"},{"name":"activation of CCL-20 production","type":"narrow"},{"name":"activation of CCL20 production","type":"narrow"},{"name":"activation of chemokine (C-C motif) ligand 20 production","type":"narrow"},{"name":"positive regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"positive regulation of CCL-20 production","type":"exact"},{"name":"positive regulation of CCL20 production","type":"exact"},{"name":"up regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up regulation of CCL-20 production","type":"exact"},{"name":"up regulation of CCL20 production","type":"exact"},{"name":"up regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"up-regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up-regulation of CCL-20 production","type":"exact"},{"name":"up-regulation of CCL20 production","type":"exact"},{"name":"up-regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"upregulation of C-C motif chemokine 20 production","type":"exact"},{"name":"upregulation of CCL-20 production","type":"exact"},{"name":"upregulation of CCL20 production","type":"exact"},{"name":"upregulation of chemokine (C-C motif) ligand 20 production","type":"exact"}],"termid":"GO:1903886"}


id: PBO:0085102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear protein putative transcription factor; required for growth of superficial pseudohyphae (which do not invade the agar substrate) but not for invasive pseudohyphal growth; may act together with Phd1p; potential Cdc28p substrate","termid":"PBO:0085102"}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: PBO:0080579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5","termid":"PBO:0080579"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: GO:1990322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIII) chains; type XXIII collagen triple helices span the plasma membrane.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"collagen type XXIII trimer","termid":"GO:1990322"}


id: GO:0089722
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108316,89433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpytuvate across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transport","termid":"GO:0015714"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089722","terms_by_termid":{"GO:1990536":null}}


id: PBO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.5","termid":"PBO:0002788"}


id: PR:O13765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lariat debranching enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12849:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat debranching enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.02c","secondary_identifiers":["UniProtKB:O13765"],"synonyms":[{"name":"SPAC17A5.02c","type":"related"},{"name":"Spom972h-DBR1","type":"exact"}],"termid":"PR:O13765"}


id: GO:0047191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acyl-CoA = 1-alkyl-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["MetaCyc:2.3.1.63-RXN","EC:2.3.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-alkylglycerophosphocholine O-acyltransferase activity","secondary_identifiers":["RHEA:23992"],"synonyms":[{"name":"acyl-CoA:1-alkyl-sn-glycero-3-phosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047191"}


id: PATO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000087 disease sensitivity (obsolete PATO:0000087)","termid":"PATO:0000087"}


id: GO:1905693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23767959","GOC:bc","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"regulation of phosphatidic acid anabolism","type":"exact"},{"name":"regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"regulation of phosphatidic acid formation","type":"exact"},{"name":"regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905693"}


id: PBO:0028009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028009"}


id: GO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein secretion","secondary_identifiers":["GO:0045731","GO:0045166"],"synonyms":[{"name":"glycoprotein secretion","type":"narrow"},{"name":"protein secretion during cell fate commitment","type":"narrow"},{"name":"protein secretion resulting in cell fate commitment","type":"narrow"}],"termid":"GO:0009306"}


id: GO:0102975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol acetate + NADP = versiconal hemiacetal acetate + NADPH.","definition_xrefs":["EC:1.1.1.353","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"versiconal hemiacetal acetate reductase activity","secondary_identifiers":["MetaCyc:RXN-9490","RHEA:35695"],"termid":"GO:0102975"}


id: PBO:0061979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AS member 2 pseudogene","termid":"PBO:0061979"}


id: PBO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1 pseudogene 1","termid":"PBO:0047317"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: PBO:0077734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 2","termid":"PBO:0077734"}


id: PBO:0079437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 5","termid":"PBO:0079437"}


id: PBO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_synology_relationship_with","termid":"PBO:0034105"}


id: GO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose (Man9-Asn) N-glycans by mannosyl-oligosaccharide 1,2-alpha-mannosidase. This may result in Man8GlcNAc2-Asn N-glycans (which in yeast may be subsequently modified by the addition of further mannose residues) or Man5GlcNAc2-Asn N-glycans that are substrates for further diversification in the Golgi apparatus.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing to secreted and cell-surface N-glycans","termid":"GO:0016257"}


id: GO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the tridecapeptide neurotensin to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state.","definition_xrefs":["PMID:10390649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotensin receptor activity","synonyms":[{"name":"G protein coupled neurotensin receptor activity","type":"exact"},{"name":"G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"neurotensin receptor activity, G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0016492"}


id: GO:1990610
data:
  {"annotated_genes":["SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99377],"is_not":false,"summary":null,"term":"GO:1990610"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetolactate synthase.","definition_xrefs":["PMID:8972574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"acetolactate synthase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990610","terms_by_termid":{"GO:1990610":null}}


id: PBO:0057668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260a","termid":"PBO:0057668"}


id: GO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"L-methylmalonyl-CoA metabolic process","synonyms":[{"name":"L-methylmalonyl-CoA metabolism","type":"exact"}],"termid":"GO:0046491"}


id: FYPO:0002748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular alanine level","synonyms":[{"name":"decreased cellular L-alanine level","type":"exact"},{"name":"decreased cellular alanine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular alanine level during vegetative growth","type":"exact"},{"name":"decreased level of alanine in cell","type":"exact"},{"name":"reduced cellular alanine level","type":"exact"},{"name":"reduced level of alanine in cell","type":"exact"}],"termid":"FYPO:0002748"}


id: MOD:01116
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["PubMed:15609361","RESID:AA0102#var","RESID:AA0105#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-farnesyl-L-cysteine","termid":"MOD:00111"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-farnesyl-L-cysteine methyl ester","synonyms":[{"name":"SFarnOMeCys","type":"exact"}],"termid":"MOD:01116"}


id: PBO:0076456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 2","termid":"PBO:0076456"}


id: GO:2000010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell surface","termid":"GO:2000008"},{"relation_name":"positively_regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell surface","synonyms":[{"name":"positive regulation of protein localisation at cell surface","type":"exact"},{"name":"positive regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000010"}


id: PBO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni1","termid":"PBO:0001828"}


id: PBO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP fusion protein localizes to the endoplasmic reticulum (ER) and extracellular region, while mCherry fusion protein localizes to the ER and vacuole; mRNA identified as translated by ribosome profiling data; CSS2 is a non-essential gene","termid":"PBO:0086053"}


id: PBO:0017806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease associated with COP1 coated vesicle (predicted)","termid":"PBO:0017806"}


id: PBO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl cyclase-associated protein Cap1","termid":"PBO:0005129"}


id: FYPO:0000008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["GO:0007131","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic recombination","synonyms":[{"name":"DNA recombination defects, meiotic","type":"exact"},{"name":"abnormal meiotic DNA recombination","type":"exact"},{"name":"abnormal reciprocal meiotic recombination","type":"exact"},{"name":"meiotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000008"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: PBO:0033761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_I_metaphase/anaphase_transition_delay","termid":"PBO:0033761"}


id: PBO:0091474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase, implicated in vitamin metabolism, or cellular detoxification","termid":"PBO:0091474"}


id: PBO:0091946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2","termid":"PBO:0091946"}


id: PBO:0073687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIVA1 apoptosis inducing factor","termid":"PBO:0073687"}


id: PR:O13339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A telomerase reverse transcriptase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12066:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.14c","secondary_identifiers":["UniProtKB:O13339"],"synonyms":[{"name":"SPBC29A3.14c","type":"related"},{"name":"Spom972h-TERT","type":"exact"},{"name":"telomerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13339"}


id: PBO:0058930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7i","termid":"PBO:0058930"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"nopaline metabolic process","termid":"GO:0046418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"nopaline catabolic process","secondary_identifiers":["MetaCyc:NOPALINEDEG-PWY"],"synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: PBO:0068366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 149","termid":"PBO:0068366"}


id: GO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(I) chains. The most common form of type I collagen is a heterotrimer containing two alpha1(I) chains and one alpha2(I) chain; homotrimers containing three alpha1(I) chains are also found. Type I collagen triple helices associate to form banded fibrils.","definition_xrefs":["GOC:mah","ISBN:0721639976","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type I trimer","secondary_identifiers":["Wikipedia:Collagen_type_I"],"termid":"GO:0005584"}


id: GO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R8 cell differentiation.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell differentiation","termid":"GO:0045679"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell differentiation","synonyms":[{"name":"down regulation of R8 differentiation","type":"exact"},{"name":"down-regulation of R8 differentiation","type":"exact"},{"name":"downregulation of R8 differentiation","type":"exact"},{"name":"inhibition of R8 differentiation","type":"narrow"},{"name":"negative regulation of R8 differentiation","type":"exact"}],"termid":"GO:0045680"}


id: GO:0015714
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108316,89433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phosphoenolpyruvate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015714","terms_by_termid":{"GO:1990536":null}}


id: PBO:0027619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitosis_following_normal_mitosis","termid":"PBO:0027619"}


id: PBO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_telomere_during_vegetative_growth","termid":"PBO:0035703"}


id: PR:O94350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.01 gene.","definition_xrefs":["UniProtKB:O94350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.01","synonyms":[{"name":"CBL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC11E10.01","type":"exact"},{"name":"beta-cystathionase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cysteine lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94350"}


id: PBO:0030350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0030350"}


id: FYPO:0000149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"transport phenotype","synonyms":[{"name":"fission yeast transport phenotype","type":"exact"}],"termid":"FYPO:0000149"}


id: PBO:0073544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain and tetratricopeptide repeats 2","termid":"PBO:0073544"}


id: GO:0017092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage, within the membrane-spanning helix, of the amino-terminal half (the intermediate form) of sterol regulatory element binding protein (SREBP). This activity releases the transcription factor domain of SREBP from the membrane, freeing it to enter the nucleus.","definition_xrefs":["GOC:bf","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein site 2 protease activity (obsolete GO:0017092)","synonyms":[{"name":"SREBP site 2 protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein site 2 protease activity","type":"exact"}],"termid":"GO:0017092"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23427:SF1","OMA:SCHPO04340","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: GO:1900601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of endocrocin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"endocrocin catabolic process","synonyms":[{"name":"endocrocin breakdown","type":"exact"},{"name":"endocrocin catabolism","type":"exact"},{"name":"endocrocin degradation","type":"exact"}],"termid":"GO:1900601"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: GO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the right ventricle grows along a radial axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial growth involved in right ventricle morphogenesis","termid":"GO:0003244"}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: GO:2000925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"negatively_regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellodextrin metabolic process","synonyms":[{"name":"negative regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000925"}


id: GO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the occurrence or rate of cell death by apoptotic process in the bone marrow.","definition_xrefs":["PMID:17063141","GOC:yaf","GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"negatively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"down regulation of apoptosis in bone marrow","type":"exact"},{"name":"down-regulation of apoptosis in bone marrow","type":"exact"},{"name":"downregulation of apoptosis in bone marrow","type":"exact"},{"name":"inhibition of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptosis in bone marrow","type":"narrow"},{"name":"negative regulation of apoptotic process in bone marrow","type":"exact"},{"name":"negative regulation of bone marrow cell apoptosis","type":"exact"},{"name":"negative regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of killing of bone marrow cells","type":"exact"},{"name":"negative regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death, bone marrow cells","type":"exact"}],"termid":"GO:0071866"}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: GO:0021657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 2. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 formation","termid":"GO:0021657"}


id: GO:0070292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acylphosphatidylethanolamines. An N-acylphosphatidylethanolamine is a phosphatidylethanolamine substituted at nitrogen by an acyl group.","definition_xrefs":["PMID:14634025","GOC:mah","GOC:elh","PMID:15878693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"N-acylphosphatidylethanolamine metabolic process","synonyms":[{"name":"N-acylphosphatidylethanolamine metabolism","type":"exact"},{"name":"NAPE metabolic process","type":"exact"},{"name":"NAPE metabolism","type":"exact"}],"termid":"GO:0070292"}


id: FYPO:0005528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions is decreased. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PMID:26205977","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased subtelomeric chromatin knob formation","synonyms":[{"name":"decreased frequency of knob-containing nuclei","type":"related"},{"name":"decreased subtelomeric chromatin condensation","type":"broad"},{"name":"decreased subtelomeric chromatin knob assembly","type":"exact"},{"name":"reduced subtelomeric chromatin knob formation","type":"exact"}],"termid":"FYPO:0005528"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["EC:4.1.3.32","RHEA:10472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["KEGG_REACTION:R01355","MetaCyc:23-DIMETHYLMALATE-LYASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: FYPO:0001215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a protein complex at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein complex assembly during vegetative growth","synonyms":[{"name":"normal cellular protein complex assembly during vegetative growth","type":"exact"},{"name":"normal protein complex assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001215"}


id: FYPO:0007674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased invertase activity","synonyms":[{"name":"increased beta-fructofuranosidase activity","type":"exact"}],"termid":"FYPO:0007674"}


id: GO:0014015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gliogenesis","termid":"GO:0014013"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"positively_regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gliogenesis","synonyms":[{"name":"activation of gliogenesis","type":"narrow"},{"name":"stimulation of gliogenesis","type":"narrow"},{"name":"up regulation of gliogenesis","type":"exact"},{"name":"up-regulation of gliogenesis","type":"exact"},{"name":"upregulation of gliogenesis","type":"exact"}],"termid":"GO:0014015"}


id: GO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the ectoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"ectoderm formation","termid":"GO:0001705"},{"relation_name":"part_of","term_name":"ectodermal cell differentiation","termid":"GO:0010668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate commitment","synonyms":[{"name":"ectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001712"}


id: GO:1902189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-methylbutanoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006629","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) metabolic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902189"}


id: PBO:0050906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 44 like","termid":"PBO:0050906"}


id: PBO:0086230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Arp2/3 complex; interacts with Arp2/3 complex to stimulate actin filament debranching and inhibit actin nucleation; has similarity to Cof1p and also to human glia maturation factor (GMF); null mutant displays elevated mitochondrial genome loss","termid":"PBO:0086230"}


id: GO:0051045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of membrane protein ectodomain proteolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of membrane protein ectodomain proteolysis","termid":"GO:0051043"},{"relation_name":"negatively_regulates","term_name":"membrane protein ectodomain proteolysis","termid":"GO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0030163","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"negative regulation of membrane protein ectodomain proteolysis","synonyms":[{"name":"down regulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"down-regulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"downregulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"inhibition of membrane protein ectodomain proteolysis","type":"narrow"}],"termid":"GO:0051045"}


id: PBO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA/DNA_annealing_activity","termid":"PBO:0034691"}


id: GO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of neuroepithelial cell differentiation. Neuroepithelial cell differentiation is the process in which epiblast cells acquire specialized features of neuroepithelial cells.","definition_xrefs":["GOC:dph","PMID:16678814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of timing of cell differentiation","termid":"GO:0048505"},{"relation_name":"negatively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibition of neuroepithelial cell differentiation","synonyms":[{"name":"negative regulation of neural plate formation","type":"narrow"},{"name":"repression of premature neural plate formation","type":"narrow"}],"termid":"GO:0002085"}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: PBO:0017074
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA substrate Km 20 nM, Vmax 1.1-2.5 nM/min","termid":"PBO:0017074"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NKC2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: PBO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine C-acetyltransferase","termid":"PBO:0048451"}


id: PBO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 10 pseudogene","termid":"PBO:0062079"}


id: FYPO:0002262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, abnormal morphology","termid":"FYPO:0002148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated cell","type":"exact"}],"termid":"FYPO:0002262"}


id: PBO:0080469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B","termid":"PBO:0080469"}


id: PBO:0031547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation","termid":"PBO:0031547"}


id: GO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 bilirubin + O2 = 2 biliverdin + 2 H2O.","definition_xrefs":["RHEA:20980","EC:1.3.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bilirubin oxidase activity","secondary_identifiers":["MetaCyc:BILIRUBIN-OXIDASE-RXN","KEGG_REACTION:R02394"],"synonyms":[{"name":"bilirubin oxidase M-1","type":"related"},{"name":"bilirubin:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047705"}


id: PBO:0043337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN6 transmembrane ER protein","termid":"PBO:0043337"}


id: PBO:0050109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 19","termid":"PBO:0050109"}


id: PBO:0056521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound transcription factor peptidase, site 1","termid":"PBO:0056521"}


id: PBO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9 pseudogene 1","termid":"PBO:0047658"}


id: PBO:0005647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17","termid":"PBO:0005647"}


id: PBO:0067097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 135, pseudogene","termid":"PBO:0067097"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: GO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"negative regulation of cell fate determination","termid":"GO:1905934"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate determination","synonyms":[{"name":"down regulation of mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of mesodermal cell fate determination","type":"exact"},{"name":"downregulation of mesodermal cell fate determination","type":"exact"},{"name":"inhibition of mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048335"}


id: PBO:0078512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 6","termid":"PBO:0078512"}


id: PBO:0073358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family E member 2","termid":"PBO:0073358"}


id: PBO:0038765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 2","termid":"PBO:0038765"}


id: PBO:0029475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029475"}


id: GO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to the interleukin-1 receptor complex.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"interleukin-1 binding","termid":"GO:0019966"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0098772","GO:0140678","GO:0005515"],"is_obsolete":false,"name":"interleukin-1 receptor antagonist activity","synonyms":[{"name":"IL-1ra","type":"exact"}],"termid":"GO:0005152"}


id: GO:0032214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via semi-conservative replication","synonyms":[{"name":"down regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"down-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"downregulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"inhibition of telomere maintenance via semi-conservative replication","type":"narrow"}],"termid":"GO:0032214"}


id: GO:1905783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a CENP-A containing nucleosome into its constituent components.","definition_xrefs":["PMID:27666591","GO_REF:0000079","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete CENP-A containing nucleosome disassembly (obsolete GO:1905783)","synonyms":[{"name":"centromere specific nucleosome disassembly","type":"related"},{"name":"centromere-specific nucleosome disassembly","type":"related"},{"name":"centromeric nucleosome disassembly","type":"related"}],"termid":"GO:1905783"}


id: MOD:00508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:14588022","Unimod:140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISD a-series (C-Term)","synonyms":[{"name":"ISD a-series (C-Term)","type":"related"},{"name":"a-type-ion","type":"related"}],"termid":"MOD:00508"}


