# terms

id: PBO:0063060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 1","termid":"PBO:0063060"}


id: GO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a.","definition_xrefs":["EC:2.7.11.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0004672","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"phosphorylase kinase activity","secondary_identifiers":["GO:0008606","Reactome:R-HSA-71541","Reactome:R-HSA-71588","Reactome:R-HSA-453337","MetaCyc:2.7.11.19-RXN"],"synonyms":[{"name":"ATP:phosphorylase-b phosphotransferase activity","type":"related"},{"name":"PHK","type":"related"},{"name":"STK17","type":"related"},{"name":"dephosphophosphorylase kinase activity","type":"related"},{"name":"glycogen phosphorylase kinase activity","type":"related"},{"name":"phosphorylase B kinase activity","type":"related"},{"name":"phosphorylase kinase (phosphorylating) activity","type":"related"},{"name":"phosphorylase kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004689"}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: PBO:0058399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-1","termid":"PBO:0058399"}


id: FYPO:0002596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002596"}


id: GO:0120276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["PMID:25397684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebral blood circulation","synonyms":[{"name":"regulation of cerebrum blood circulation","type":"exact"},{"name":"regulation of telencephalon blood circulation","type":"exact"}],"termid":"GO:0120276"}


id: GO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,6-dichlorocatechol + O2 = 2 H+ + 2,5-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"chlorocatechol 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018575"}


id: GO:0103012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 a reduced ferredoxin + an oxidized thioredoxin = 2 an oxidized ferredoxin + a reduced thioredoxin, involving a 4Fe-4S cluster and an adjacent active-site disulfide.","definition_xrefs":["PMID:14769790","RHEA:42336","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ferredoxin-thioredoxin reductase activity","secondary_identifiers":["MetaCyc:RXN-9944","EC:1.8.7.2","GO:0030385"],"synonyms":[{"name":"ferredoxin:thioredoxin reductase activity","type":"exact"}],"termid":"GO:0103012"}


id: GO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of light-activated channel activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of light-activated channel activity","termid":"GO:0016061"}


id: GO:0022842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that may be gated or ungated.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"narrow pore channel activity","termid":"GO:0022842"}


id: PBO:0030606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_calcium_starvation","termid":"PBO:0030606"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93111],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380048","Reactome:R-HSA-380240","RHEA:16013","MetaCyc:GLYCINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: PBO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 18","termid":"PBO:0072392"}


id: GO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction pathway (obsolete GO:0052525)","synonyms":[{"name":"activation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"stimulation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"up regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"up-regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"upregulation by host of symbiont signal transduction pathway","type":"exact"}],"termid":"GO:0052525"}


id: FYPO:0005799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule plus ends remain in contact with the cell cortex at cell tips for a shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased microtubule dwell time at cell tip","synonyms":[{"name":"decreased microtubule dwell time at cell end","type":"exact"},{"name":"decreased microtubule dwell time at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased microtubule dwell time at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule plus end dwell time at cell tip","type":"exact"},{"name":"reduced microtubule dwell time at cell tip","type":"exact"}],"termid":"FYPO:0005799"}


id: PBO:0004426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 1 (predicted)","termid":"PBO:0004426"}


id: PBO:0048007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 1","termid":"PBO:0048007"}


id: PBO:0030190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sporulation_frequency","termid":"PBO:0030190"}


id: PBO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030745"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: GO:1990808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-BAR domain of a protein, a domain of about 60 residues that occurs in a wide range of cytoskeletal proteins.","definition_xrefs":["PMID:20603077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"F-bar domain binding","termid":"GO:1990808"}


id: PBO:0083808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that promotes the first step of splicing; required for the final stages of spliceosome maturation and activation; interacts with Prp2p, which may release Spp2p from the spliceosome following the first cleavage reaction; stimulates Prp2p ATPase activity","termid":"PBO:0083808"}


id: GO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine metabolic process","termid":"GO:0051165"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process","synonyms":[{"name":"2,5-dihydroxypyridine breakdown","type":"exact"},{"name":"2,5-dihydroxypyridine catabolism","type":"exact"},{"name":"2,5-dihydroxypyridine degradation","type":"exact"},{"name":"pyridine-2,5-diol catabolic process","type":"exact"}],"termid":"GO:0051166"}


id: GO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle maturation","termid":"GO:0048819"}


id: PBO:0068385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 186","termid":"PBO:0068385"}


id: FYPO:0001394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth may occur at either the new or old end of the cell, instead of exclusively at the old end, following cell division. A population of cells with this phenotype has a 1:1 mix of cells initiating growth at the new end and cells initiating growth at the old end.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"activation of monopolar cell growth at either end","synonyms":[{"name":"abnormal initiation of growth from either old or new end following cell division","type":"exact"},{"name":"activation of monopolar vegetative cell growth at either end","type":"exact"}],"termid":"FYPO:0001394"}


id: FYPO:0006173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle elongation does not occur during prophase. Normally, the spindle elongates immediately following assembly during prophase, remains at a static length during metaphase and anaphase A, and elongates further during anaphase B.","definition_xrefs":["PMID:21920317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly","termid":"FYPO:0000119"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation","termid":"FYPO:0003829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic spindle elongation during prophase","synonyms":[{"name":"abolished spindle elongation during mitotic prophase","type":"exact"},{"name":"abolished spindle elongation during prophase during mitotic cell cycle","type":"related"},{"name":"mitotic spindle elongation abolished during prophase","type":"exact"},{"name":"mitotic spindle elongation abolished during prophase during vegetative growth","type":"exact"}],"termid":"FYPO:0006173"}


id: PBO:0054415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1811","termid":"PBO:0054415"}


id: GO:0097284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatocyte, the main structural component of the liver.","definition_xrefs":["GOC:mtg_apoptosis","CL:0000182","GOC:jc","PMID:15856020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte apoptotic process","synonyms":[{"name":"hepatocyte apoptosis","type":"narrow"}],"termid":"GO:0097284"}


id: PBO:0074792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12","termid":"PBO:0074792"}


id: PBO:0053378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 304","termid":"PBO:0053378"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: PBO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR3","termid":"PBO:0016994"}


id: PBO:0087470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ATP-dependent Isw2p-Itc1p chromatin remodeling complex; required for repression of a-specific genes, repression of early meiotic genes during mitotic growth, and repression of INO1; similar to mammalian Acf1p, the regulatory subunit of the mammalian ATP-utilizing chromatin assembly and modifying factor (ACF) complex; ITC1 has a paralog, YPL216W, that arose from the whole genome duplication","termid":"PBO:0087470"}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: PBO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_actomyosin_contractile_ring_assembly","termid":"PBO:0030728"}


id: PBO:0111948
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0111948"}


id: GO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Evagination of a membrane to form a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle budding","termid":"GO:0070142"}


id: PBO:0061802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dense fiber of sperm tails 2 like","termid":"PBO:0061802"}


id: PBO:0091687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (with segmental deletion) Wtf2","termid":"PBO:0091687"}


id: PBO:0079195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 24, pseudogene","termid":"PBO:0079195"}


id: PBO:0005208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA metabolism pathway protein Pet127","termid":"PBO:0005208"}


id: PBO:0040756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB","termid":"PBO:0040756"}


id: GO:0016270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["PMID:10580130","GOC:pr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"O-glycan processing, core 4","termid":"GO:0016270"}


id: GO:0072290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in metanephros development","termid":"GO:0035788"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"metanephric nephron tubule morphogenesis","termid":"GO:0072282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"}


id: PBO:0003429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug57","termid":"PBO:0003429"}


id: PBO:0029120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate","termid":"PBO:0029120"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: PBO:0082943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis; with Sdo1p, a guanine nucleotide exchange factor (GEF), promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; required for quality control check of newly made large ribosomal subunits before they are released into the pool of translating ribosomes","termid":"PBO:0082943"}


id: FYPO:0007101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is not straight, but instead forms an angle where microtubules from opposite poles interdigitate, during meiosis I.","definition_xrefs":["PMID:22292001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"bent spindle during meiosis I","synonyms":[{"name":"V-shaped bipolar spindle during meiosis I","type":"exact"},{"name":"bent bipolar spindle during meiosis I","type":"exact"},{"name":"bent meiotic spindle during meiosis I","type":"exact"},{"name":"bent spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007101"}


id: GO:1901275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tartrate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate metabolic process","synonyms":[{"name":"tartrate metabolism","type":"exact"}],"termid":"GO:1901275"}


id: FYPO:0007414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a subtelomeric region (STE1) adjacent to telomeric repeats is duplicated by homologous recombination.","definition_xrefs":["PMID:31980821","PMID:29392410","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during G0","termid":"FYPO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"subtelomere expansion during G0","synonyms":[{"name":"STE1 expansion during G0","type":"exact"},{"name":"STEEx during G0","type":"exact"},{"name":"amplification of subtelomeric regions in G0","type":"exact"},{"name":"subtelomere amplification during G0","type":"exact"},{"name":"subtelomere expansion during cell quiescence","type":"exact"},{"name":"subtelomere expansion during quiescence","type":"exact"},{"name":"subtelomere rearrangement during G0","type":"related"},{"name":"subtelomeric region expansion during G0","type":"exact"}],"termid":"FYPO:0007414"}


id: PR:O94556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12558:SF10","OMA:SCHPO00543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.14","secondary_identifiers":["UniProtKB:O94556"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC23","type":"exact"},{"name":"cell untimely torn protein 23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94556"}


id: GO:1900138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase A2 activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipase activity","termid":"GO:0010519"},{"relation_name":"is_a","term_name":"regulation of phospholipase A2 activity","termid":"GO:0032429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase A2 activity","synonyms":[{"name":"down regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down regulation of lecithinase A activity","type":"exact"},{"name":"down regulation of phosphatidase activity","type":"related"},{"name":"down regulation of phosphatidolipase activity","type":"exact"},{"name":"down regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down regulation of phospholipase A","type":"related"},{"name":"down regulation of phospholipase A2 activity","type":"exact"},{"name":"down regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"down-regulation of lecithinase A activity","type":"exact"},{"name":"down-regulation of phosphatidase activity","type":"related"},{"name":"down-regulation of phosphatidolipase activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase A","type":"related"},{"name":"down-regulation of phospholipase A2 activity","type":"exact"},{"name":"down-regulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"downregulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"downregulation of lecithinase A activity","type":"exact"},{"name":"downregulation of phosphatidase activity","type":"related"},{"name":"downregulation of phosphatidolipase activity","type":"exact"},{"name":"downregulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"downregulation of phospholipase A","type":"related"},{"name":"downregulation of phospholipase A2 activity","type":"exact"},{"name":"downregulation of secreted phospholipase A2 activity","type":"narrow"},{"name":"inhibition of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"inhibition of lecithinase A activity","type":"narrow"},{"name":"inhibition of phosphatidase activity","type":"related"},{"name":"inhibition of phosphatidolipase activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine 2-acylhydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase A","type":"related"},{"name":"inhibition of phospholipase A2 activity","type":"narrow"},{"name":"inhibition of secreted phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of cytosolic phospholipase A2 activity","type":"narrow"},{"name":"negative regulation of lecithinase A activity","type":"exact"},{"name":"negative regulation of phosphatidase activity","type":"related"},{"name":"negative regulation of phosphatidolipase activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine 2-acylhydrolase activity","type":"exact"},{"name":"negative regulation of phospholipase A","type":"related"},{"name":"negative regulation of secreted phospholipase A2 activity","type":"narrow"}],"termid":"GO:1900138"}


id: PBO:0039476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18F, pseudogene","termid":"PBO:0039476"}


id: GO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein ubiquitination","termid":"GO:0031396"}


id: PBO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 3","termid":"PBO:0039682"}


id: PBO:0063144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 4","termid":"PBO:0063144"}


id: GO:0032210
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91191],"is_not":false,"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomere lengthening","termid":"GO:1904356"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of telomere maintenance via telomerase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032210","terms_by_termid":{"GO:0032210":null}}


id: PBO:0110073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in rescue of stalled ribosomes Hel2","termid":"PBO:0110073"}


id: PBO:0041946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 6","termid":"PBO:0041946"}


id: PBO:0071520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 23","termid":"PBO:0071520"}


id: PBO:0058503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5693","termid":"PBO:0058503"}


id: GO:1902895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GO_REF:0000058","GOC:dph","PMID:24699545","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of miRNA transcription","termid":"GO:1902893"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA transcription","synonyms":[{"name":"activation of pri-miRNA transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of microRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA gene transcription","type":"exact"},{"name":"positive regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"positive regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of primary miRNA gene transcription","type":"exact"},{"name":"up regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1902895"}


id: FYPO:0004149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxal kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal pyridoxal kinase activity","termid":"FYPO:0004149"}


id: PBO:0073724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 6","termid":"PBO:0073724"}


id: PBO:0078632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trio Rho guanine nucleotide exchange factor","termid":"PBO:0078632"}


id: PBO:0018082
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutants lacking primase activity fail to complement S. cerevisiae MCM10 deletion","termid":"PBO:0018082"}


id: GO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0004672","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent protein kinase activity","termid":"GO:0010857"}


id: GO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-9 activity (obsolete GO:0004211)","synonyms":[{"name":"caspase-9 activity","type":"exact"}],"termid":"GO:0004211"}


id: PBO:0065650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type C associated protein","termid":"PBO:0065650"}


id: PBO:0044124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 10, pseudogene","termid":"PBO:0044124"}


id: GO:0015018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein.","definition_xrefs":["EC:2.4.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity","secondary_identifiers":["RHEA:24168","Reactome:R-HSA-9638064","MetaCyc:2.4.1.135-RXN","Reactome:R-HSA-1889955","Reactome:R-HSA-3560802"],"synonyms":[{"name":"UDP-glucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"glucuronosyltransferase I activity","type":"narrow"},{"name":"uridine diphosphate glucuronic acid:acceptor glucuronosyltransferase activity","type":"related"}],"termid":"GO:0015018"}


id: FYPO:0002714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the Golgi apparatus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to Golgi apparatus","synonyms":[{"name":"ectopic protein localization to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus during vegetative growth","type":"exact"},{"name":"protein mislocalized to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002714"}


id: FYPO:0006837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein dephosphorylation during cytokinesis","synonyms":[{"name":"increased protein dephosphorylation during cytokinesis during vegetative growth","type":"exact"},{"name":"increased protein/peptide dephosphorylation during cytokinesis","type":"exact"}],"termid":"FYPO:0006837"}


id: PBO:0058882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10398","termid":"PBO:0058882"}


id: GO:0080132
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87909],"is_not":false,"summary":null,"term":"GO:0080132"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a fatty acid to an alpha-hydroxylated fatty acid. A hydroxyl group is added to the second carbon, counted from the carboxyl end, of a fatty acid chain.","definition_xrefs":["PMID:19054355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid alpha-hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693761"],"synonyms":[{"name":"fatty acid 2-hydroxylase","type":"exact"}],"termid":"GO:0080132","terms_by_termid":{"GO:0080132":null}}


id: GO:2000420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of eosinophil migration","termid":"GO:2000417"},{"relation_name":"is_a","term_name":"regulation of eosinophil extravasation","termid":"GO:2000419"},{"relation_name":"negatively_regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil extravasation","termid":"GO:2000420"}


id: PR:O74734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal recycling factor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.09","synonyms":[{"name":"Spom972h-rrf1","type":"exact"}],"termid":"PR:O74734"}


id: GO:0009194
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[111619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate biosynthetic process","termid":"GO:0009139"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate biosynthetic process","termid":"GO:0009188"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009194","terms_by_termid":{"GO:0006225":null,"GO:0046705":null}}


id: GO:0044499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant increase of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044499"}


id: GO:0046448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tropane alkaloid metabolic process","synonyms":[{"name":"tropane alkaloid metabolism","type":"exact"}],"termid":"GO:0046448"}


id: PBO:0011454
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-5sec-1) for base excision activity of 1,N(6)-ethenoadenine = 5.3","termid":"PBO:0011454"}


id: PBO:0074467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submaxillary gland androgen regulated protein 3A","termid":"PBO:0074467"}


id: FYPO:0001291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}


id: PBO:0041355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4B (Chido blood group), copy 2","termid":"PBO:0041355"}


id: GO:0006768
data:
  {"annotated_genes":["SJAG_01935","SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110157,75129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving biotin, cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00673":null,"SJAG_01935":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"biotin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Biotin"],"synonyms":[{"name":"biotin metabolism","type":"exact"},{"name":"vitamin B7 metabolic process","type":"exact"},{"name":"vitamin B7 metabolism","type":"exact"},{"name":"vitamin H metabolic process","type":"exact"},{"name":"vitamin H metabolism","type":"exact"}],"termid":"GO:0006768","terms_by_termid":{"GO:0009102":null}}


id: GO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.","definition_xrefs":["RHEA:14265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase activity","secondary_identifiers":["EC:5.4.3.8","KEGG_REACTION:R02272","MetaCyc:GSAAMINOTRANS-RXN"],"synonyms":[{"name":"(S)-4-amino-5-oxopentanoate 4,5-aminomutase activity","type":"related"},{"name":"glutamate-1-semialdehyde aminotransferase activity","type":"related"}],"termid":"GO:0042286"}


id: GO:0021898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial commitment of cells whereby the developmental fate of a cell becomes restricted such that it will develop into some type of neuron in the forebrain.","definition_xrefs":["GOC:jid","GOC:dph","PMID:12626695","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron fate commitment","termid":"GO:0021877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}


id: PBO:0073791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 11","termid":"PBO:0073791"}


id: GO:0034582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-4-methyloctanoyl-CoA = 4-methyl-3-oxooctanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-4-methyloctanoyl-CoA dehydrogenase activity","termid":"GO:0034582"}


id: PBO:0082035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase; catalyzes the acylation of lysophosphatidic acid to form phosphatidic acid, a key intermediate in lipid metabolism; enzymatic activity detected in lipid particles and microsomes","termid":"PBO:0082035"}


id: GO:0099549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by carbon monoxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: GO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.","definition_xrefs":["MetaCyc:METHANOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methanol oxidase activity","secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0046563"}


id: GO:0010663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of striated muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a striated muscle cell and result in its death.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell apoptotic process","termid":"GO:0010661"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell apoptotic process","termid":"GO:0010662"},{"relation_name":"positively_regulates","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle cell apoptotic process","synonyms":[{"name":"positive regulation of striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010663"}


id: PBO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S7","termid":"PBO:0060804"}


id: PBO:0058465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5194","termid":"PBO:0058465"}


id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: GO:0102767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-naringenin + S-adenosyl-L-methionine = 2 H+ + ponciretin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavanone 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7777","RHEA:31743"],"termid":"GO:0102767"}


id: GO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism modulates the frequency, rate or extent of any of a process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral process","termid":"GO:0044788"}


id: PBO:0044556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DARS1 antisense RNA 1","termid":"PBO:0044556"}


id: SO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter region of RNA polymerase III type 1 promoters.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate_element","synonyms":[{"name":"IE","type":"exact"},{"name":"intermediate element","type":"related"}],"termid":"SO:0001677"}


id: FYPO:0003084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abolished replication fork arrest at mating-type locus","synonyms":[{"name":"abolished replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"replication fork arrest at mating-type locus abolished","type":"exact"},{"name":"replication fork arrest at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003084"}


id: PBO:0069083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 330, pseudogene","termid":"PBO:0069083"}


id: PBO:0038861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with dual PH domains 1","termid":"PBO:0038861"}


id: PBO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 3","termid":"PBO:0042824"}


id: PBO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Hri1","termid":"PBO:0002703"}


id: GO:0014810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014810"}


id: GO:1903339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"negatively_regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"negative regulation of cell wall organization or biogenesis","synonyms":[{"name":"down regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down-regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"downregulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"inhibition of cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis at cellular level","type":"narrow"},{"name":"inhibition of cellular cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cellular cell wall organization or biogenesis","type":"narrow"},{"name":"negative regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"negative regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903339"}


id: GO:0014848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary tract. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary tract consists of organs of the body that produce and discharge urine. These include the kidneys, ureters, bladder, and urethra.","definition_xrefs":["GOC:mtg_muscle","MSH:D014551","GOC:ef","MA:0000325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}


id: GO:1902726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of satellite cell differentiation.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell differentiation","termid":"GO:2001016"},{"relation_name":"positively_regulates","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle satellite cell differentiation","synonyms":[{"name":"activation of satellite cell differentiation","type":"narrow"},{"name":"up regulation of satellite cell differentiation","type":"exact"},{"name":"up-regulation of satellite cell differentiation","type":"exact"},{"name":"upregulation of satellite cell differentiation","type":"exact"}],"termid":"GO:1902726"}


id: GO:0035110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a leg are generated and organized. A leg is a limb on which an animal walks and stands.","definition_xrefs":["GOC:bf","ISBN:0198612001"],"gene_count":0,"genotype_count":0,"name":"obsolete leg morphogenesis (obsolete GO:0035110)","synonyms":[{"name":"leg morphogenesis","type":"exact"}],"termid":"GO:0035110"}


id: GO:0003689
data:
  {"annotated_genes":["SJAG_01010","SJAG_00272","SJAG_02373","SJAG_00729","SJAG_02610","SJAG_02182","SJAG_00863","SJAG_00806","SJAG_04150","SJAG_02563"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85267,85713,87813,90073,91375,92411,103052,108338,108798,108890],"is_not":false,"summary":null,"term":"GO:0003689"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["PMID:16082778","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02563":null,"SJAG_02610":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA clamp loader activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033170","Reactome:R-HSA-174439","Reactome:R-HSA-176264"],"synonyms":[{"name":"DNA clamp loading ATPase activity","type":"exact"},{"name":"DNA-protein loading ATPase activity","type":"related"},{"name":"PCNA loading activity","type":"narrow"},{"name":"PCNA loading complex activity","type":"narrow"},{"name":"protein-DNA loading ATPase activity","type":"related"}],"termid":"GO:0003689","terms_by_termid":{"GO:0003689":null}}


id: PBO:0085156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3' to 5' DNA helicase activity; involved in positioning and spacing of nucleosomes over most genes independently of transcription; promotes nucleosome shifts in the 3' direction; has a role in modulating stress gene transcription","termid":"PBO:0085156"}


id: PBO:0014239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OxySterol binding protein Homolog","termid":"PBO:0014239"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: GO:1903000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:TermGenie","PMID:24345162","GO_REF:0000058","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"regulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903000"}


id: PBO:0036284
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Aspergillus niger clxA","termid":"PBO:0036284"}


id: PBO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DRB1","termid":"PBO:0001162"}


id: PBO:0078271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 7-1","termid":"PBO:0078271"}


id: PBO:0053952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1257","termid":"PBO:0053952"}


id: GO:1905819
data:
  {"annotated_genes":["SJAG_01515","SJAG_04259","SJAG_01679","SJAG_04999","SJAG_04884","SJAG_04699","SJAG_03327","SJAG_03681","SJAG_03126","SJAG_02451","SJAG_01082","SJAG_03353","SJAG_00460","SJAG_01330","SJAG_01837","SJAG_02336","SJAG_02169","SJAG_04126","SJAG_01297","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86847,99971,109845,110323,95668,108017,104318,103296,111948],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110549,102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[97874,102374,112717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[110552,105974,102375,109849,111597,95517,97875,86849,112720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[94785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[111598,102376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90300],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112724],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90301],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromosome separation.","definition_xrefs":["PMID:21795393","GOC:TermGenie","GO_REF:0000058","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"negatively_regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromatid release","type":"related"},{"name":"down regulation of chromosome separation","type":"exact"},{"name":"down regulation of rDNA separation","type":"narrow"},{"name":"down-regulation of chromatid release","type":"related"},{"name":"down-regulation of chromosome separation","type":"exact"},{"name":"down-regulation of rDNA separation","type":"narrow"},{"name":"downregulation of chromatid release","type":"related"},{"name":"downregulation of chromosome separation","type":"exact"},{"name":"downregulation of rDNA separation","type":"narrow"},{"name":"inhibition of chromatid release","type":"related"},{"name":"inhibition of chromosome separation","type":"narrow"},{"name":"inhibition of rDNA separation","type":"narrow"},{"name":"negative regulation of chromatid release","type":"related"},{"name":"negative regulation of rDNA separation","type":"narrow"}],"termid":"GO:1905819","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: PBO:0065370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presenilin 1","termid":"PBO:0065370"}


id: GO:0015299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:proton antiporter activity (obsolete GO:0015299)","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"},{"name":"solute:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015299"}


id: PBO:0044832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 119","termid":"PBO:0044832"}


id: PBO:0088953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane adaptor for ubiquitin ligase Rcr1","termid":"PBO:0088953"}


id: PATO:0000810
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000810 touch value (obsolete PATO:0000810)","termid":"PATO:0000810"}


id: PBO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 136","termid":"PBO:0044855"}


id: GO:0032715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-6 production","termid":"GO:0032675"},{"relation_name":"negatively_regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-6 production","secondary_identifiers":["GO:0045409","GO:1900165"],"synonyms":[{"name":"down regulation of interleukin-6 production","type":"exact"},{"name":"down-regulation of interleukin-6 production","type":"exact"},{"name":"downregulation of interleukin-6 production","type":"exact"},{"name":"inhibition of interleukin-6 production","type":"narrow"},{"name":"negative regulation of IL-6 production","type":"exact"},{"name":"negative regulation of interleukin-6 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-6 secretion","type":"narrow"}],"termid":"GO:0032715"}


id: GO:0042132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-70479","RHEA:11064","MetaCyc:F16BDEPHOS-RXN"],"synonyms":[{"name":"D-fructose 1,6-diphosphatase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate phosphatase activity","type":"related"},{"name":"FBPase activity","type":"related"},{"name":"fructose 1,6-bisphosphatase activity","type":"related"},{"name":"fructose 1,6-bisphosphate phosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphate phosphatase activity","type":"related"},{"name":"fructose bisphosphate phosphatase activity","type":"related"},{"name":"fructose diphosphatase activity","type":"related"},{"name":"fructose diphosphate phosphatase activity","type":"related"},{"name":"fructose-1,6-bisphosphatase activity","type":"related"},{"name":"fructose-bisphosphatase activity","type":"broad"},{"name":"hexose bisphosphatase activity","type":"related"},{"name":"hexose diphosphatase activity","type":"related"},{"name":"hexosediphosphatase activity","type":"broad"}],"termid":"GO:0042132"}


id: PBO:0040786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 3","termid":"PBO:0040786"}


id: PBO:0077023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 5","termid":"PBO:0077023"}


id: PR:O74895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.11","synonyms":[{"name":"Spom972h-rpl15","type":"exact"}],"termid":"PR:O74895"}


id: PBO:0082224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin involved in ubiquitin-dependent endocytosis; activating dephosphorylation relays glucose signaling to transporter endocytosis; calcineurin dephosphorylation is required for Rsp5p-dependent internalization of agonist-occupied Ste2p, as part of signal desensitization; recruits Rsp5p to Ste2p via its 2 PPXY motifs; protein abundance increases in response to DNA replication stress; ROD1 has a paralog, ROG3, that arose from the whole genome duplication","termid":"PBO:0082224"}


id: PBO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 9","termid":"PBO:0072007"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:tb","GOC:dph","GOC:dos","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: GO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm protein localization","secondary_identifiers":["GO:0048115"],"synonyms":[{"name":"establishment and maintenance of pole plasm protein localization","type":"exact"},{"name":"oocyte pole plasm protein localization","type":"exact"},{"name":"pole plasm protein localisation","type":"exact"}],"termid":"GO:0007318"}


id: FYPO:0001586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell tip during vegetative growth","synonyms":[{"name":"decreased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell end during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0001586"}


id: PBO:0077441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176A","termid":"PBO:0077441"}


id: GO:0009749
data:
  {"annotated_genes":["SJAG_01254","SJAG_04026","SJAG_02444","SJAG_00472","SJAG_04312","SJAG_00574","SJAG_03081","SJAG_01699","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102550,97924,102906,111572,101958,105588,112611,105078,90328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glucose","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to glucose stimulus","type":"exact"}],"termid":"GO:0009749","terms_by_termid":{"GO:0010619":null}}


id: PBO:0049557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 19, pseudogene","termid":"PBO:0049557"}


id: PBO:0051344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-26","termid":"PBO:0051344"}


id: PBO:0066573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh family C glycoprotein","termid":"PBO:0066573"}


id: GO:0023029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules.","definition_xrefs":["GOC:vw","GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"MHC class Ib protein binding","termid":"GO:0023029"}


id: PBO:0056467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase family member 4","termid":"PBO:0056467"}


id: SO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A rolling circle transposon. Autonomous helitrons encode a 5'-to-3' DNA helicase and nuclease/ligase similar to those encoded by known rolling-circle replicons.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helitron","secondary_identifiers":["http://en.wikipedia.org/wiki/Helitron"],"synonyms":[{"name":"ISCR","type":"related"}],"termid":"SO:0000544"}


id: GO:0160132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is composed of multifold plasma membrane of the epidermis where it is in direct contact with apical extracellular matrix. Meisosome, or multiple eisome is named because of its superficial similarity to yeast eisosome.","definition_xrefs":["PMID:36913486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"meisosome","termid":"GO:0160132"}


id: PATO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001036 relative life span (obsolete PATO:0001036)","termid":"PATO:0001036"}


id: PBO:0061712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 7","termid":"PBO:0061712"}


id: PBO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim9","termid":"PBO:0090573"}


id: GO:0018604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobenzoate + 2 H+ + O2 + 2 e- = NH3 + 3,4-dihydroxybenzoate.","definition_xrefs":["UM-BBD_reactionID:r0566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-aminobenzoate 3,4-dioxygenase (deaminating) activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018604"}


id: PR:Q9P3W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIE subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13097:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIE subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC458.07","secondary_identifiers":["UniProtKB:Q9P3W1"],"synonyms":[{"name":"SPAC458.07","type":"related"},{"name":"Spom972h-GTF2E1","type":"exact"},{"name":"TFIIE-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3W1"}


id: PBO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_osmolarity","termid":"PBO:0031349"}


id: PBO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subcellular_component_during_vegetative_growth","termid":"PBO:0030919"}


id: PBO:0056079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member K","termid":"PBO:0056079"}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: GO:0042906
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84592],"is_not":false,"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of xanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"xanthine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xanthine transmembrane transport","type":"exact"}],"termid":"GO:0042906","terms_by_termid":{"GO:0042906":null}}


id: PBO:0048484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCOM1, MYZAP-POLR2M combined locus","termid":"PBO:0048484"}


id: GO:0072518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Rho GTPase-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:ecd","PMID:12778124","PMID:20230755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0004672","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"Rho-dependent protein serine/threonine kinase activity","synonyms":[{"name":"ROCK kinase activity","type":"exact"},{"name":"Rho-associated protein kinase activity","type":"exact"}],"termid":"GO:0072518"}


id: GO:0009867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid.","definition_xrefs":["PMID:20159850","PMID:19522558","PMID:16478936","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid mediated signaling pathway","synonyms":[{"name":"JA signaling","type":"exact"},{"name":"jasmonate signaling","type":"related"},{"name":"jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009867"}


id: PBO:0073341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 3","termid":"PBO:0073341"}


id: GO:0098031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small disk located at the base of some icosahedral virus capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, collar","termid":"GO:0098031"}


id: PBO:0046404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb homolog 1","termid":"PBO:0046404"}


id: PBO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7B","termid":"PBO:0043745"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: FYPO:0006349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to chromatin at promoter","synonyms":[{"name":"abolished protein localisation to chromatin at promoter during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at promoter element","type":"exact"},{"name":"protein localization to chromatin at promoter abolished","type":"exact"}],"termid":"FYPO:0006349"}


id: GO:0018571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-p-cumate + O2 = 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate.","definition_xrefs":["RHEA:42568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-p-cumate dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0397","MetaCyc:RXN-666"],"synonyms":[{"name":"2,3-dihydroxy-p-cumate 3,4-dioxygenase","type":"exact"},{"name":"2,3-dihydroxy-p-cumate-3,4-dioxygenase","type":"exact"}],"termid":"GO:0018571"}


id: PBO:0078734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 6-1","termid":"PBO:0078734"}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: PBO:0054721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2130","termid":"PBO:0054721"}


id: PBO:0063667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins GalNAc transferase 4","termid":"PBO:0063667"}


id: PBO:0029049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_to_cell_cortex_during_nitrogen_starvation","termid":"PBO:0029049"}


id: PBO:0027398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-UAA_suppression","termid":"PBO:0027398"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PATO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001088 absolute efficiency value (obsolete PATO:0001088)","termid":"PATO:0001088"}


id: FYPO:0006376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype in which the observed occurrence of protein processing is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:25803873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0006551","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein processing during nitrogen starvation","synonyms":[{"name":"decreased protein cleavage during nitrogen starvation","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during nitrogen starvation","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during nitrogen starvation","type":"exact"},{"name":"decreased protein processing during nitrogen depletion","type":"exact"},{"name":"decreased protein processing during nitrogen deprivation","type":"exact"},{"name":"reduced protein processing during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006376"}


id: PBO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 12, pseudogene","termid":"PBO:0070055"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: PBO:0031240
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_establishment_or_maintenance_of_cell_polarity","termid":"PBO:0031240"}


id: GO:1905617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["PMID:23409027","GOC:PARL","GOC:bc","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905617)","synonyms":[{"name":"down regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"down-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"downregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"downregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"downregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"downregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"downregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"inhibition of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"inhibition of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of miRNA mediated inhibition of translation","type":"narrow"},{"name":"inhibition of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"inhibition of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"negative regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"negative regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"negative regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"negative regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905617"}


id: PBO:0108835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase Siw14","termid":"PBO:0108835"}


id: GO:0106039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process carried out at the cellular level, which is the final step in vesicle assembly. Vesicle fusion occurs when a newly assembled vesicle closes up, following vesicle vesicle scission (GO:0099050).","definition_xrefs":["PMID:25898166","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle fusion involved in vesicle assembly (obsolete GO:0106039)","termid":"GO:0106039"}


id: GO:0016330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A discrete cell cycle in the third instar eye imaginal disc after progression of the morphogenetic furrow that contributes to compound eye morphogenesis. It is essential for generation of a sufficient pool of uncommitted cells to develop complete ommatidia.","definition_xrefs":["PMID:11257224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"second mitotic wave involved in compound eye morphogenesis","synonyms":[{"name":"second mitotic wave during compound eye morphogenesis","type":"related"}],"termid":"GO:0016330"}


id: SO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is allelically_excluded.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"allelically_excluded","termid":"SO:0000137"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelically_excluded_gene","synonyms":[{"name":"allelically excluded gene","type":"exact"}],"termid":"SO:0000897"}


id: GO:0097235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:1899286","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097235)","termid":"GO:0097235"}


id: PBO:0075909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 1","termid":"PBO:0075909"}


id: PR:O74829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C530.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.15c","synonyms":[{"name":"Spom972h-SPBC530.15c","type":"exact"}],"termid":"PR:O74829"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: GO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactose biosynthetic process","synonyms":[{"name":"galactose anabolism","type":"exact"},{"name":"galactose biosynthesis","type":"exact"},{"name":"galactose formation","type":"exact"},{"name":"galactose synthesis","type":"exact"}],"termid":"GO:0046369"}


id: PBO:0071788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p21","termid":"PBO:0071788"}


id: PBO:0087793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-ligase and SUMO-targeted metalloprotease; involved in DNA repair; removes DNA-protein crosslinks at stalled replication forks during replication of damaged DNA; clears chromatin-bound sumoylated proteins; localizes to single spot on nuclear periphery of mother cells but not daughters; exhibits vacuolar localization upon genotoxic stress; activated by DNA binding; member of minigluzincins protease family with mammalian DVC1/Spartan","termid":"PBO:0087793"}


id: PBO:0071444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 50","termid":"PBO:0071444"}


id: GO:0016855
data:
  {"annotated_genes":["SJAG_04298","SJAG_00036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88565,113390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036361"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.1.-"],"termid":"GO:0016855","terms_by_termid":{"GO:0036361":null}}


id: PBO:0088274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase and TOR substrate adaptor Sin1","termid":"PBO:0088274"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: GO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class III cytochrome c (obsolete GO:0009471)","synonyms":[{"name":"class III cytochrome c","type":"exact"}],"termid":"GO:0009471"}


id: PBO:0038284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genotype_display_name","termid":"PBO:0038284"}


id: PBO:0083790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in the TOR signaling pathway; physically associates with the protein phosphatase 2A and the SIT4 protein phosphatase catalytic subunits","termid":"PBO:0083790"}


id: PBO:0055869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 1","termid":"PBO:0055869"}


id: PBO:0058397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4769","termid":"PBO:0058397"}


id: FYPO:0000859
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115543,115542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a cellular metabolic process is normal (i.e. indistinguishable from wild type). A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["PomBase:mah","GO:0044237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"normal metabolic process during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular metabolic process during vegetative growth","type":"exact"},{"name":"normal metabolic process during mitotic cell cycle","type":"related"},{"name":"normal metabolism during vegetative growth","type":"exact"}],"termid":"FYPO:0000859","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0065131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKG2 antisense RNA 1","termid":"PBO:0065131"}


id: FYPO:0007556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diethylstilbestrol. Cells stop growing (and may die) at a concentration of diethylstilbestrol that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to diethylstilbestrol","synonyms":[{"name":"hypersensitive to diethylstilbestrol","type":"exact"},{"name":"sensitive to DES","type":"exact"},{"name":"sensitive to diethylstilbestrol during mitotic cell cycle","type":"related"},{"name":"sensitive to diethylstilbestrol during vegetative growth","type":"exact"}],"termid":"FYPO:0007556"}


id: PBO:0072451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 15","termid":"PBO:0072451"}


id: PR:O60091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl24 gene.","definition_xrefs":["UniProtKB:O60091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.10","synonyms":[{"name":"Spom972h-mrpl24","type":"exact"}],"termid":"PR:O60091"}


id: GO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + beta-glucan(in) = ADP + phosphate + beta-glucan(out).","definition_xrefs":["RHEA:18453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type beta-glucan transporter activity","secondary_identifiers":["EC:7.5.2.3","MetaCyc:3.6.3.42-RXN"],"synonyms":[{"name":"ABC-type beta-glucan transporter","type":"related"},{"name":"ATP-dependent beta-glucan transporter activity","type":"related"},{"name":"ATPase-coupled beta-glucan transporter activity","type":"related"},{"name":"beta-glucan ABC transporter","type":"exact"},{"name":"beta-glucan-transporting ATPase activity","type":"related"}],"termid":"GO:0015441"}


id: PBO:0087925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates the pleiotropic drug response; zinc cluster protein that is a master regulator involved in recruiting other zinc cluster proteins to pleiotropic drug response elements (PDREs) to fine tune the regulation of multidrug resistance genes; relocalizes to the cytosol in response to hypoxia; PDR1 has a paralog, PDR3, that arose from the whole genome duplication","termid":"PBO:0087925"}


id: _global:complete_evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is complete_evidence_for_feature A if the extent (5' and 3' boundaries) and internal boundaries of B fully support the extent and internal boundaries of A.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evidence_for_feature","termid":"_global:evidence_for_feature"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complete_evidence_for_feature","termid":"_global:complete_evidence_for_feature"}


id: GO:0043585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nose are generated and organized. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"nose development","termid":"GO:0043584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose morphogenesis","synonyms":[{"name":"nasus morphogenesis","type":"exact"}],"termid":"GO:0043585"}


id: FYPO:0005221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0051259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein oligomerization","synonyms":[{"name":"normal protein oligomerization during vegetative growth","type":"exact"},{"name":"normal protein oligomerisation","type":"exact"},{"name":"normal protein oligomerization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005221"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: PBO:0041895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 1","termid":"PBO:0041895"}


id: GO:0140209
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89874,89875],"is_not":false,"summary":null,"term":"GO:0140209"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across the endoplasmic reticulum membrane, into the endoplasmic reticulum.","definition_xrefs":["PMID:29529046","PMID:11886869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc ion import across endoplasmic reticulum","type":"exact"},{"name":"zinc ion import into ER","type":"exact"},{"name":"zinc(2+) import across endoplasmic reticulum","type":"exact"},{"name":"zinc(2+) import into endoplasmic reticulum","type":"exact"}],"termid":"GO:0140209","terms_by_termid":{"GO:0140209":null}}


id: PBO:0034286
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_via_type_Ib_bouton_to","termid":"PBO:0034286"}


id: GO:0019284
data:
  {"annotated_genes":["SJAG_03614","SJAG_01404","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88757,95101,103070],"is_not":false,"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from S-adenosylmethionine.","definition_xrefs":["GOC:vw","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"},{"relation_name":"part_of","term_name":"S-adenosylmethionine cycle","termid":"GO:0033353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01404":null,"SJAG_02689":null,"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage from S-adenosylmethionine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine formation from S-adenosylmethionine","type":"exact"},{"name":"L-methionine synthesis from S-adenosylmethionine","type":"exact"}],"termid":"GO:0019284","terms_by_termid":{"GO:0019284":null}}


id: GO:0046802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an assembled viral particle out of the host cell nucleus by budding and fusion through the nuclear membranes. In this process, enveloped viral particles are formed by budding through the inner nuclear membrane. These perinuclear enveloped particles then fuse with the outer nuclear membrane to deliver a naked capsid into the host cytoplasm.","definition_xrefs":["PMID:21494278","PMID:22858153","PMID:9601512","PMID:9765421","VZ:1952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus by nuclear egress","secondary_identifiers":["GO:0039676"],"synonyms":[{"name":"capsid egress","type":"exact"},{"name":"egress of viral procapsid from host cell nucleus","type":"related"},{"name":"nuclear egress","type":"exact"},{"name":"nuclear egress of viral procapsid","type":"exact"}],"termid":"GO:0046802"}


id: PBO:0058630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6762","termid":"PBO:0058630"}


id: PBO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member C","termid":"PBO:0047255"}


id: PBO:0064903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3CB antisense RNA 1 (head to head)","termid":"PBO:0064903"}


id: PBO:0031247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_pseudohyphal_growth","termid":"PBO:0031247"}


id: GO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasminogen activation","termid":"GO:0010755"},{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"positively_regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"positive regulation of plasminogen activation","termid":"GO:0010756"}


id: GO:1904636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:17516843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionomycin","termid":"GO:1904636"}


id: PBO:0078541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 33","termid":"PBO:0078541"}


id: GO:0045265
data:
  {"annotated_genes":["SJAG_03925","SJAG_00133","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103876,111891,99732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00836":null,"SJAG_03925":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase, stator stalk","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, stator stalk","type":"exact"}],"termid":"GO:0045265","terms_by_termid":{"GO:0000274":null}}


id: GO:1900043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any leptin-mediated signaling pathway that is involved in negative regulation of appetite.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete leptin-mediated signaling pathway involved in negative regulation of appetite (obsolete GO:1900043)","synonyms":[{"name":"adipocytokine signaling pathway of appetite suppression","type":"related"},{"name":"adipocytokine signaling pathway of down regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of down-regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of downregulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of inhibition of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of appetite","type":"related"},{"name":"adipocytokine signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signaling pathway involved in negative regulation of appetite","type":"exact"},{"name":"leptin-mediated signaling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signaling pathway of down regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of down-regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of downregulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of inhibition of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signaling pathway of negative regulation of hunger","type":"related"},{"name":"leptin-mediated signalling pathway of appetite suppression","type":"related"},{"name":"leptin-mediated signalling pathway of down regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of down-regulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of downregulation of appetite","type":"exact"},{"name":"leptin-mediated signalling pathway of inhibition of appetite","type":"narrow"},{"name":"leptin-mediated signalling pathway of negative regulation of appetite","type":"related"},{"name":"leptin-mediated signalling pathway of negative regulation of hunger","type":"related"}],"termid":"GO:1900043"}


id: GO:0032052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bile acid, a steroid carboxylic acids occurring in bile.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bile acid binding","termid":"GO:0032052"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: PBO:0041460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf88B (pseudogene)","termid":"PBO:0041460"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: MOD:00634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:770170","Unimod:324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethyl 3,3'-dithiobispropionimidate","synonyms":[{"name":"DTBP","type":"related"},{"name":"dimethyl 3,3'-dithiobispropionimidate","type":"related"}],"termid":"MOD:00634"}


id: PBO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease","termid":"PBO:0090315"}


id: PBO:0071561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 27","termid":"PBO:0071561"}


id: PBO:0068129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 436","termid":"PBO:0068129"}


id: PBO:0076768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TDRD6 and SLC25A27 antisense RNA 1","termid":"PBO:0076768"}


id: PBO:0040917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 21","termid":"PBO:0040917"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["RHEA:21296","MetaCyc:GALACTODEHYDROG-RXN"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: GO:0055049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the presence of centrosomes.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete astral spindle assembly (obsolete GO:0055049)","termid":"GO:0055049"}


id: PBO:0063014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2B","termid":"PBO:0063014"}


id: PBO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit delta 1","termid":"PBO:0039665"}


id: PBO:0071102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 104","termid":"PBO:0071102"}


id: PATO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A grooved texture quality inhering in a bearer by virtue of the bearer's being marked by two or more parallel channels.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grooved","termid":"PATO:0002255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furrowed","synonyms":[{"name":"fluted","type":"related"}],"termid":"PATO:0001948"}


id: GO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["Wikipedia:Anti-sigma_factors","GOC:txnOH","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription corepressor activity","termid":"GO:0003714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003714"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0140110","GO:0003712","GO:0003714","GO:0060090"],"is_obsolete":false,"name":"sigma factor antagonist activity","synonyms":[{"name":"anti-sigma factor activity","type":"exact"}],"termid":"GO:0016989"}


id: GO:1901046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oviposition.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of egg-laying behavior","termid":"GO:0046662"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of egg-laying behavior","synonyms":[{"name":"activation of egg laying","type":"broad"},{"name":"activation of egg-laying","type":"broad"},{"name":"activation of oviposition","type":"narrow"},{"name":"positive regulation of egg laying","type":"broad"},{"name":"positive regulation of egg-laying","type":"broad"},{"name":"positive regulation of oviposition","type":"exact"},{"name":"up regulation of egg laying","type":"broad"},{"name":"up regulation of egg-laying","type":"broad"},{"name":"up regulation of oviposition","type":"exact"},{"name":"up-regulation of egg laying","type":"broad"},{"name":"up-regulation of egg-laying","type":"broad"},{"name":"up-regulation of oviposition","type":"exact"},{"name":"upregulation of egg laying","type":"broad"},{"name":"upregulation of egg-laying","type":"broad"},{"name":"upregulation of oviposition","type":"exact"}],"termid":"GO:1901046"}


id: PBO:0071322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 6","termid":"PBO:0071322"}


id: GO:0048471
data:
  {"annotated_genes":["SJAG_01785","SJAG_01422","SJAG_01227","SJAG_04400","SJAG_00825","SJAG_04578","SJAG_01329","SJAG_02532","SJAG_00355","SJAG_03162","SJAG_03609","SJAG_04883","SJAG_01527","SJAG_03750","SJAG_02683","SJAG_01664","SJAG_04059","SJAG_04049","SJAG_03145","SJAG_03943","SJAG_00790","SJAG_02723","SJAG_01722","SJAG_03281","SJAG_04583","SJAG_00784"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89259,92646,96782,102706,105128],"is_not":false,"summary":null,"term":"GO:0048471"},{"annotations":[108117,84630,110240,90341,89769,84913,106525,105978,109984,110457,104266,103458,114879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097038"},{"annotations":[89187],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[83532,90817,96672,111643,94749,102382,93901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"Cytoplasm situated near, or occurring around, the nucleus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01527":null,"SJAG_01664":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_02683":null,"SJAG_02723":null,"SJAG_03145":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04400":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"perinuclear region of cytoplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048471","terms_by_termid":{"GO:0048471":null,"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: GO:0007239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Hog1 (obsolete GO:0007239)","synonyms":[{"name":"activation of Hog1","type":"exact"}],"termid":"GO:0007239"}


id: FYPO:0006603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the RTS1 barrier (normally located in the mating-type region) occurs to a lower extent than normal.","definition_xrefs":["PMID:26201080","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork arrest at RTS1 barrier","synonyms":[{"name":"decreased replication fork arrest at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at RTS1 barrier during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at RTS1 element","type":"exact"},{"name":"reduced replication fork arrest at RTS1 barrier","type":"exact"}],"termid":"FYPO:0006603"}


id: PBO:0074712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74C-2","termid":"PBO:0074712"}


id: GO:0032973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"amino acid export across plasma membrane","secondary_identifiers":["GO:0044746"],"synonyms":[{"name":"amino acid efflux","type":"exact"},{"name":"amino acid export","type":"broad"},{"name":"amino acid transmembrane export","type":"broad"}],"termid":"GO:0032973"}


id: GO:1902164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043517"},{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:1902162"},{"relation_name":"positively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","synonyms":[{"name":"activation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"narrow"},{"name":"up regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"up-regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"},{"name":"upregulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","type":"exact"}],"termid":"GO:1902164"}


id: PR:G2TRK8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.15","synonyms":[{"name":"Spom972h-new12","type":"exact"}],"termid":"PR:G2TRK8"}


id: GO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct. An example of this is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"ovulation","termid":"GO:0030728"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation from ovarian follicle","termid":"GO:0001542"}


id: GO:0003186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the tricuspid valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"},{"relation_name":"part_of","term_name":"tricuspid valve development","termid":"GO:0003175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve morphogenesis","termid":"GO:0003186"}


id: GO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase II (RNAP II) transcription regulator and recruiting it to the general transcription machinery complex in order to modulate transcription initiation.","definition_xrefs":["GOC:txnOH-2018","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription regulator recruiting activity (obsolete GO:0001135)","synonyms":[{"name":"RNA polymerase II transcription factor recruiting activity","type":"exact"},{"name":"RNA polymerase II transcription factor recruiting transcription factor activity","type":"exact"},{"name":"TFIIE-class transcription factor recruiting transcription factor activity","type":"narrow"},{"name":"TFIIF-class transcription factor recruiting transcription factor activity","type":"narrow"},{"name":"TFIIH-class transcription factor recruiting transcription factor activity","type":"narrow"},{"name":"transcription factor activity, RNA polymerase II transcription factor recruiting","type":"related"},{"name":"transcription factor activity, TFIIE-class transcription factor recruiting","type":"narrow"},{"name":"transcription factor activity, TFIIF-class transcription factor recruiting","type":"narrow"},{"name":"transcription factor activity, TFIIH-class transcription factor recruiting","type":"narrow"}],"termid":"GO:0001135"}


id: GO:0015129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactate from one side of a membrane to the other. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["GOC:ai","RHEA:34987","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lactate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-373867","Reactome:R-HSA-373875"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015129"}


id: GO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate metabolic process","synonyms":[{"name":"D-xylulose 5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose 5-phosphate metabolism","type":"exact"},{"name":"D-xylulose-5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose-5-phosphate metabolism","type":"exact"},{"name":"xylulose 5-phosphate metabolism","type":"exact"},{"name":"xylulose-5-phosphate metabolic process","type":"exact"},{"name":"xylulose-5-phosphate metabolism","type":"exact"}],"termid":"GO:0051167"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opsin-mediated signaling pathway","termid":"GO:0022400"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of opsin-mediated signaling pathway","synonyms":[{"name":"deactivation of opsin mediated signaling","type":"narrow"},{"name":"deactivation of rhodopsin mediated signalling","type":"narrow"},{"name":"negative regulation of rhodopsin-mediated signaling pathway","type":"narrow"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: PBO:0069583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 857, pseudogene","termid":"PBO:0069583"}


id: PBO:0087145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding subunit of the mRNA cleavage and polyadenylation factor; involved in poly(A) site recognition and required for both pre-mRNA cleavage and polyadenylation, 51% sequence similarity with mammalian AAUAA-binding subunit of CPSF","termid":"PBO:0087145"}


id: PR:Q10430
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Spc25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14281:SF0","OMA:SCHPO04698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.04c","secondary_identifiers":["UniProtKB:Q10430"],"synonyms":[{"name":"Spom972h-SPC25","type":"exact"}],"termid":"PR:Q10430"}


id: PBO:0062111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 10 pseudogene","termid":"PBO:0062111"}


id: GO:0019349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose. It occurs free in some plants and is a component of riboflavin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ribitol metabolic process","synonyms":[{"name":"ribitol metabolism","type":"exact"}],"termid":"GO:0019349"}


id: GO:0061051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the growth of a cardiac muscle cell, where growth contributes to the progression of the cell over time from its initial formation to its mature state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle hypertrophy","termid":"GO:0010613"},{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061050"},{"relation_name":"positively_regulates","term_name":"cell growth involved in cardiac muscle cell development","termid":"GO:0061049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth involved in cardiac muscle cell development","termid":"GO:0061051"}


id: PBO:0041223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 3","termid":"PBO:0041223"}


id: PBO:0004105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit D (predicted)","termid":"PBO:0004105"}


id: GO:0036210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration performed by one organism of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) in another organism. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete protein modification process in another organism (obsolete GO:0036210)","synonyms":[{"name":"protein modification in other organism","type":"exact"},{"name":"protein modification process in other organism","type":"exact"}],"termid":"GO:0036210"}


id: PBO:0040307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit beta","termid":"PBO:0040307"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: PBO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of lithium","termid":"PBO:0005541"}


id: FYPO:0005502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcription","synonyms":[{"name":"abnormal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0005502"}


id: GO:0015244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fluconazole from one side of a membrane to the other. Fluconazole is an antifungal drug used for oral candidiasis and cryptococcal meningitis; it is still under study for treatment of vaginal candidiasis and other fungal infections.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"fluconazole transmembrane transporter activity","synonyms":[{"name":"fluconazole transporter activity","type":"related"}],"termid":"GO:0015244"}


id: PBO:0039002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afadin, adherens junction formation factor","termid":"PBO:0039002"}


id: PBO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["GOC:nln","PMID:6267560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: SO:1001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001267 stop_codon_readthrough (obsolete SO:1001267)","termid":"SO:1001267"}


id: PBO:0085537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8A has a paralog, RPS8B, that arose from the whole genome duplication","termid":"PBO:0085537"}


id: PBO:0003887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase 1 protein Trt1","termid":"PBO:0003887"}


id: PBO:0040402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 3","termid":"PBO:0040402"}


id: GO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Neurotransmitter secretion that occurs in the absence of the action of a secretagogue or a presynaptic action potential.","definition_xrefs":["GOC:dph","GOC:pad","GOC:PARL","PMID:21334193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"spontaneous synaptic transmission","termid":"GO:0098814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"spontaneous neurotransmitter secretion","synonyms":[{"name":"stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:0061669"}


id: PR:000050520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein scr1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-235, Ser-332, Ser-333, Ser-408, and Ser-410 of the amino acid sequence represented by UniProtKB:O14335. Example: UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, MOD:00046.","definition_xrefs":["PMID:22140232","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","termid":"PR:000050519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scr1/Phos(S236,S332,S333,S408,S410)","pombase_gene_id":"SPBC1D7.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-binding protein scr1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-scr1/Phos:1","type":"exact"},{"name":"UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, MOD:00046","type":"narrow"},{"name":"scr1/Phos(S236,S332,S333,S408,S410)","type":"exact"}],"termid":"PR:000050520"}


id: PBO:0035973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_rDNA_during_vegetative_growth","termid":"PBO:0035973"}


id: SO:0000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase III binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter","synonyms":[{"name":"RNA polymerase C promoter","type":"exact"},{"name":"RNApol III promoter","type":"exact"},{"name":"pol III promoter","type":"exact"},{"name":"polymerase III promoter","type":"exact"}],"termid":"SO:0000171"}


id: PBO:0047339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 1","termid":"PBO:0047339"}


id: PBO:0074844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36A","termid":"PBO:0074844"}


id: PR:Q9USP2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ynd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apyrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.05c","synonyms":[{"name":"ADPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-diphosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi nucleoside diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ynd1","type":"exact"},{"name":"adenosine diphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP2"}


id: PBO:0086193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to the human peptidyl-tRNA hydrolase gene ICT1; associates with mitochondrial large subunit; may function in translation termination; YOL114C is not an essential gene","termid":"PBO:0086193"}


id: PBO:0060302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A and MYL12B antisense RNA 1","termid":"PBO:0060302"}


id: GO:0009110
data:
  {"annotated_genes":["SJAG_00252","SJAG_04282","SJAG_00381","SJAG_02406","SJAG_00827","SJAG_02421","SJAG_05200","SJAG_04845","SJAG_04481","SJAG_01054","SJAG_02420","SJAG_00707","SJAG_00283","SJAG_00691","SJAG_00815","SJAG_03632","SJAG_01881","SJAG_03362","SJAG_01970","SJAG_04156","SJAG_00043","SJAG_03679","SJAG_03275","SJAG_01935","SJAG_01126","SJAG_03538","SJAG_00106","SJAG_00673","SJAG_02225","SJAG_01383","SJAG_00376","SJAG_02360","SJAG_04067","SJAG_00491","SJAG_02491","SJAG_01543","SJAG_02408","SJAG_00480","SJAG_04711","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[75129,110157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[108472,109740,104410,100847,100995,102139,86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[94828,85037,98832,109433,94824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[109745,85180],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95768,111738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96948,110447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[91599,63450,83884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[91600,83886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[97222,103040,83631,110828,106440,102844,113198,111772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[109657,112069,103443,110067,95604,109651,90392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[109652,90393,109658,110068,112070,95605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[95607,106513,106514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic process","termid":"GO:0006766"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00376":null,"SJAG_00381":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_00673":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00815":null,"SJAG_00827":null,"SJAG_01054":null,"SJAG_01126":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_01935":null,"SJAG_01970":null,"SJAG_02225":null,"SJAG_02360":null,"SJAG_02406":null,"SJAG_02408":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_02491":null,"SJAG_03275":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_04067":null,"SJAG_04156":null,"SJAG_04282":null,"SJAG_04481":null,"SJAG_04711":null,"SJAG_04845":null,"SJAG_04866":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin anabolism","type":"exact"},{"name":"vitamin biosynthesis","type":"exact"},{"name":"vitamin formation","type":"exact"},{"name":"vitamin synthesis","type":"exact"}],"termid":"GO:0009110","terms_by_termid":{"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042821":null,"GO:0042823":null,"GO:0046656":null,"GO:0090180":null}}


id: FYPO:0008198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is decreased.","definition_xrefs":["PMID:15572668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to plasma membrane during vegetative growth","termid":"FYPO:0008198"}


id: GO:1905215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA binding.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of RNA binding","termid":"GO:1905214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA binding","synonyms":[{"name":"down regulation of RNA binding","type":"exact"},{"name":"down-regulation of RNA binding","type":"exact"},{"name":"downregulation of RNA binding","type":"exact"},{"name":"inhibition of RNA binding","type":"narrow"}],"termid":"GO:1905215"}


id: GO:0062200
data:
  {"annotated_genes":["SJAG_04461","SJAG_00317","SJAG_00236","SJAG_00333","SJAG_03637","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87251,96255,101413,108533,109110,114792],"is_not":false,"summary":null,"term":"GO:0062200"}]},"cv_name":"biological_process","definition":"An intracellular signaling cascade that starts with the activation of S. cerevisiae Kic1p, which activate Mob2p and Cbk1p. Cbk1p phosphorylates Ace2p, which results in its nuclear translocation, where it regulates transcription of genes involved in polarity and morphogenesis.","definition_xrefs":["PMID:20805322","PMID:22629372","PMID:16096637","PMID:20826805","PMID:21246752","PMID:23212898","PMID:15731009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00661":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"RAM/MOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MOR signaling pathway","type":"narrow"},{"name":"RAM signaling pathway","type":"narrow"},{"name":"RAM/MOR signaling pathway","type":"exact"},{"name":"morphogenesis Orb6 network","type":"exact"}],"termid":"GO:0062200","terms_by_termid":{"GO:0062200":null}}


id: FYPO:0006890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of heme export from the vacuole to the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vacuolar transport","termid":"FYPO:0000598"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased heme export from vacuole","synonyms":[{"name":"decreased heme export from vacuole during mitotic cell cycle","type":"related"},{"name":"decreased heme export from vacuole during vegetative growth","type":"exact"},{"name":"heme export from vacuole to cytoplasm","type":"exact"},{"name":"reduced heme export from vacuole","type":"exact"}],"termid":"FYPO:0006890"}


id: GO:0019915
data:
  {"annotated_genes":["SJAG_01537","SJAG_03162","SJAG_03609","SJAG_04059","SJAG_01180","SJAG_04041","SJAG_02763","SJAG_02980","SJAG_01906","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86166,87564,105796,108120,110243,115577],"is_not":false,"summary":null,"term":"GO:0019915"},{"annotations":[110242,92810,84915,90751,107049,108119,114881],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["PMID:11102830","GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid storage","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"lipid retention","type":"exact"},{"name":"lipid sequestering","type":"narrow"},{"name":"lipid sequestration","type":"narrow"},{"name":"retention of lipids","type":"exact"},{"name":"sequestering of lipids","type":"narrow"},{"name":"sequestration of lipid","type":"narrow"},{"name":"sequestration of lipids","type":"exact"},{"name":"storage of lipids","type":"exact"}],"termid":"GO:0019915","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: PBO:0108553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2 (meiRNA), long isoform","termid":"PBO:0108553"}


id: PBO:0058338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4712","termid":"PBO:0058338"}


id: PBO:0066594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member H","termid":"PBO:0066594"}


id: PBO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhophilin-2 homolog (predicted)","termid":"PBO:0002131"}


id: PATO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a substance by virtue of the ease with which the substance can be changed into a gaseous state.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaporizability","termid":"PATO:0002200"}


id: GO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large, cysteine proteinase rich lysosomes, often found in the amastigote (an intracytoplasmic, nonflagellated form of the parasite) stage of Leishmania species belonging to the mexicana complex.","definition_xrefs":["PMID:11206117","PMID:1999020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"megasome","termid":"GO:0043246"}


id: SO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wild type: A motif of seven consecutive residues that contains two H-bonds in which: the main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+6), the main-chain CO of residue(i+1) is H-bonded to the main-chain NH of residue(i+5).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schellmann_loop","termid":"SO:0001123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"schellmann_loop_seven","secondary_identifiers":["BS:00228"],"synonyms":[{"name":"schellmann loop seven","type":"exact"},{"name":"seven-residue schellmann loop","type":"exact"}],"termid":"SO:0001124"}


id: GO:0052872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocotrienol + O2 + NADPH + H+ = 13'-hydroxy-tocotrienol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocotrienol omega-hydroxylase activity (obsolete GO:0052872)","synonyms":[{"name":"tocotrienol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052872"}


id: PBO:0029317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_subtelomere","termid":"PBO:0029317"}


id: GO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0582015952","ISBN:0709408862","ISBN:0697037754","GOC:jid","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoperiodism, flowering","termid":"GO:2000028"},{"relation_name":"regulates","term_name":"short-day photoperiodism, flowering","termid":"GO:0048575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of short-day photoperiodism, flowering","termid":"GO:0048587"}


id: PATO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's surface becoming more extended in a plane.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flattened","synonyms":[{"name":"compressed","type":"related"}],"termid":"PATO:0002254"}


id: PBO:0046485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 8, CSA ubiquitin ligase complex subunit","termid":"PBO:0046485"}


id: GO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:go_curators","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acid chemical","synonyms":[{"name":"response to acid","type":"broad"},{"name":"response to acid anion","type":"related"},{"name":"response to oxoanion","type":"related"}],"termid":"GO:0001101"}


id: PBO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","termid":"PBO:0090078"}


id: PBO:0087964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication","termid":"PBO:0087964"}


id: FYPO:0000710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to nitrogen starvation, which normally occurs in G1 phase, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"abnormal mitotic cell cycle arrest in response to nitrogen depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000710"}


id: GO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XIV myosin heavy chain and associated light chains; myosin XIV heavy chains are the simplest known, containing a motor domain, no classic IQ motif and variable length tails.","direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin XIV complex","termid":"GO:0031484"}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: PBO:0024835
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae FKS2","termid":"PBO:0024835"}


id: GO:0021584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the pons. This process pertains to the initial formation of a structure from unspecified parts. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"hindbrain formation","termid":"GO:0021576"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons formation","termid":"GO:0021584"}


id: PBO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 5","termid":"PBO:0075149"}


id: GO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to the presence of arachidonic acid.","definition_xrefs":["PMID:18202452","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}


id: PBO:0081706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 626","termid":"PBO:0081706"}


id: PBO:0063498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 7","termid":"PBO:0063498"}


id: PR:O14248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea3 gene.","definition_xrefs":["UniProtKB:O14248","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.02c","synonyms":[{"name":"Spom972h-tea3","type":"exact"},{"name":"cell polarity protein tea3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14248"}


id: PR:O43076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SHQ1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02840","PANTHER:PTHR12967:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein shq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.13","secondary_identifiers":["UniProtKB:O43076"],"synonyms":[{"name":"Spom972h-SHQ1","type":"exact"}],"termid":"PR:O43076"}


id: PBO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutA divalent cation tolerance homolog","termid":"PBO:0044241"}


id: PBO:0026814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_meiotic_cell_cycle","termid":"PBO:0026814"}


id: PBO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 11","termid":"PBO:0072134"}


id: PBO:0056730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript","termid":"PBO:0056730"}


id: PBO:0036046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_multiseptate_cell","termid":"PBO:0036046"}


id: GO:0103098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + tetrahomomethionine + 2 O2 + 2 NADPH = 3 H2O + carbon dioxide + 2 NADP + 7-methylthioheptanaldoxime.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CYP79F1 tetrahomomethionine monooxygenase activity","secondary_identifiers":["MetaCyc:RXNQT-4311"],"termid":"GO:0103098"}


id: GO:1905383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynapse.","definition_xrefs":["GOC:TermGenie","PMID:24449494","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to presynapse","synonyms":[{"name":"protein localisation in presynapse","type":"exact"},{"name":"protein localisation to presynapse","type":"exact"},{"name":"protein localization in presynapse","type":"exact"},{"name":"recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905383"}


id: PBO:0041260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 230","termid":"PBO:0041260"}


id: PBO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression cell cycle regulated","termid":"PBO:0000436"}


id: GO:1990960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of basophils such that the total number of basophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"},{"relation_name":"is_a","term_name":"myeloid cell homeostasis","termid":"GO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil homeostasis","synonyms":[{"name":"basophilic leucocyte homeostasis","type":"exact"}],"termid":"GO:1990960"}


id: FYPO:0008126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally found only in the cytoplasm  is observed in the nucleoplasm during mitotic M-phase.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic protein mislocalized to nucleoplasm during mitotic M-phase","termid":"FYPO:0008126"}


id: PBO:0064235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 2","termid":"PBO:0064235"}


id: GO:0071645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 4 production","termid":"GO:0071643"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"positive regulation of CCL4 production","type":"exact"},{"name":"positive regulation of MIP-1b production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071645"}


id: GO:0006187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGTP, deoxyguanosine triphosphate (2'-deoxyguanosine 5'-triphosphate) from other compounds, including gGDP, deoxyguanosine diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dGDP metabolic process","termid":"GO:0046066"},{"relation_name":"is_a","term_name":"dGTP biosynthetic process","termid":"GO:0046071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dGTP biosynthetic process from dGDP","synonyms":[{"name":"dGTP anabolism from dGDP","type":"exact"},{"name":"dGTP formation from dGDP","type":"exact"},{"name":"dGTP synthesis from dGDP","type":"exact"}],"termid":"GO:0006187"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: PBO:0086180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA; structure reveals unique HEAT repeat fold and a surface serine patch; phosphorylation of serine patch impairs cell growth and reduces RNA polymerase I binding in vitro and RNA polymerase I recruitment to the rDNA gene in vivo","termid":"PBO:0086180"}


id: GO:0140301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the pollen grain (male gametophyte) and the stigmatic tissues of the female sporophyte after the pollen reaches the stigmatic papillae.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-stigma interaction","termid":"GO:0140301"}


id: PR:Q7LKV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- whi2 gene.","definition_xrefs":["UniProtKB:Q7LKV1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20H4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.08","synonyms":[{"name":"Spom972h-whi2","type":"exact"}],"termid":"PR:Q7LKV1"}


id: PBO:0045861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 2","termid":"PBO:0045861"}


id: PBO:0064743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 79","termid":"PBO:0064743"}


id: PBO:0051070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-12","termid":"PBO:0051070"}


id: PBO:0046674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESX homeobox 1","termid":"PBO:0046674"}


id: GO:1900223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of amyloid-beta clearance","termid":"GO:1900221"},{"relation_name":"positively_regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid-beta clearance","synonyms":[{"name":"activation of beta-amyloid clearance","type":"narrow"},{"name":"positive regulation of beta-amyloid clearance","type":"exact"},{"name":"up regulation of beta-amyloid clearance","type":"exact"},{"name":"up-regulation of beta-amyloid clearance","type":"exact"},{"name":"upregulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900223"}


id: GO:0051257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the spindle midzone, the area in the center of the spindle where the spindle microtubules from opposite poles overlap, as a part of the process of meiosis.","definition_xrefs":["GOC:expert_rg","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone assembly","termid":"GO:0051255"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0140013","GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"meiotic spindle midzone assembly","synonyms":[{"name":"meiotic spindle midzone biogenesis","type":"exact"},{"name":"meiotic spindle midzone biosynthesis","type":"exact"},{"name":"meiotic spindle midzone formation","type":"exact"},{"name":"spindle midzone assembly involved in meiosis","type":"exact"},{"name":"spindle midzone biogenesis involved in meiosis","type":"exact"},{"name":"spindle midzone biosynthesis involved in meiosis","type":"exact"},{"name":"spindle midzone formation involved in meiosis","type":"exact"}],"termid":"GO:0051257"}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: PBO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 1","termid":"PBO:0048174"}


id: PBO:0064602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 3","termid":"PBO:0064602"}


id: PBO:0031590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_process","termid":"PBO:0031590"}


id: PBO:0003943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein (predicted)","termid":"PBO:0003943"}


id: GO:0015433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate.","definition_xrefs":["TC:3.A.1.209.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type peptide transporter activity","termid":"GO:0015440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type peptide antigen transporter activity","secondary_identifiers":["RHEA:65972","MetaCyc:3.6.3.43-RXN","Reactome:R-HSA-1236949","Reactome:R-HSA-983144","EC:7.4.2.14"],"synonyms":[{"name":"ATP-dependent peptide antigen transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled peptide antigen transmembrane transporter activity","type":"related"},{"name":"major histocompatibility peptide transporter activity","type":"exact"},{"name":"peptide antigen ABC transporter","type":"narrow"},{"name":"peptide antigen transporter activity","type":"broad"},{"name":"peptide antigen-transporting ATPase activity","type":"exact"}],"termid":"GO:0015433"}


id: PATO:0001109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001109 absolute amplitude value (obsolete PATO:0001109)","termid":"PATO:0001109"}


id: PBO:0040897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 ribosome biogenesis factor","termid":"PBO:0040897"}


id: PBO:0058789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7158","termid":"PBO:0058789"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: PBO:0047924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(11)(q23.3)","termid":"PBO:0047924"}


id: PBO:0035998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035998"}


id: GO:1900699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of o-orsellinic acid biosynthetic process","termid":"GO:1900698"},{"relation_name":"negatively_regulates","term_name":"o-orsellinic acid biosynthetic process","termid":"GO:1900584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of o-orsellinic acid biosynthetic process","synonyms":[{"name":"down regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down regulation of o-orsellinic acid formation","type":"exact"},{"name":"down regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"down-regulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"down-regulation of o-orsellinic acid formation","type":"exact"},{"name":"down-regulation of o-orsellinic acid synthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid anabolism","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"downregulation of o-orsellinic acid biosynthetic process","type":"exact"},{"name":"downregulation of o-orsellinic acid formation","type":"exact"},{"name":"downregulation of o-orsellinic acid synthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid anabolism","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthesis","type":"exact"},{"name":"inhibition of o-orsellinic acid biosynthetic process","type":"narrow"},{"name":"inhibition of o-orsellinic acid formation","type":"exact"},{"name":"inhibition of o-orsellinic acid synthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid anabolism","type":"exact"},{"name":"negative regulation of o-orsellinic acid biosynthesis","type":"exact"},{"name":"negative regulation of o-orsellinic acid formation","type":"exact"},{"name":"negative regulation of o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900699"}


id: GO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid passes intact through the host nuclear pore complex (NPC).","definition_xrefs":["PMID:22929056","VZ:989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of intact viral capsid into host nucleus through nuclear pore complex","termid":"GO:0075505"}


id: FYPO:0005701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the interphase microtubule organizing center does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to iMTOC","synonyms":[{"name":"abolished protein localisation to iMTOC","type":"exact"},{"name":"abolished protein localization to iMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to iMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to interphase microtubule organizing center","type":"exact"},{"name":"protein absent from iMTOC","type":"related"},{"name":"protein localization to iMTOC abolished","type":"exact"}],"termid":"FYPO:0005701"}


id: GO:0004329
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104413,108476],"is_not":false,"summary":null,"term":"GO:0004329"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate.","definition_xrefs":["EC:6.3.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"formate-tetrahydrofolate ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-200711","RHEA:20221","Reactome:R-HSA-5696839","Reactome:R-HSA-6801456","MetaCyc:FORMATETHFLIG-RXN"],"synonyms":[{"name":"10-formyl-THF synthetase activity","type":"exact"},{"name":"10-formyltetrahydrofolate synthetase activity","type":"related"},{"name":"formate:tetrahydrofolate ligase (ADP-forming)","type":"related"},{"name":"formyltetrahydrofolate synthetase activity","type":"related"},{"name":"tetrahydrofolate formylase activity","type":"related"},{"name":"tetrahydrofolic formylase activity","type":"related"}],"termid":"GO:0004329","terms_by_termid":{"GO:0004329":null}}


id: GO:0035517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.","definition_xrefs":["PMID:20436459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"PR-DUB complex","synonyms":[{"name":"Polycomb repressive deubiquitinase complex","type":"exact"}],"termid":"GO:0035517"}


id: GO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type II secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type II secretion system (obsolete GO:0052327)","synonyms":[{"name":"interaction with symbiont via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052327"}


id: GO:0034884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-N-formylaminovinylacetaldehyde + H2O = gamma-N-formylaminovinylacetate + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1349"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-N-formylaminovinylacetaldehyde dehydrogenase activity (obsolete GO:0034884)","synonyms":[{"name":"gamma-N-formylaminovinylacetaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0034884"}


id: PBO:0064886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Balpha","termid":"PBO:0064886"}


id: GO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from UV light into a molecular signal; ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 400 nanometers.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"detection of UV","termid":"GO:0009589"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction, UV","synonyms":[{"name":"UV-sensitive opsin","type":"related"},{"name":"phototransduction, UV light","type":"exact"},{"name":"phototransduction, UV radiation","type":"exact"},{"name":"phototransduction, ultraviolet light","type":"exact"},{"name":"phototransduction, ultraviolet radiation","type":"exact"}],"termid":"GO:0007604"}


id: PATO:0000973
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's disposition to admit the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porosity","termid":"PATO:0000973"}


id: PATO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and orange hue with a slight amount of gray.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vermilion","termid":"PATO:0001302"}


id: PBO:0005830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing, Zfs1 target number 1","termid":"PBO:0005830"}


id: PBO:0109961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109961"}


id: PBO:0083189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C","termid":"PBO:0083189"}


id: PBO:0069904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1195, pseudogene","termid":"PBO:0069904"}


id: PBO:0089975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthase adaptor protein Smi1","termid":"PBO:0089975"}


id: PBO:0050097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 7","termid":"PBO:0050097"}


id: PBO:0089496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","termid":"PBO:0089496"}


id: GO:0090273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of somatostatin secretion","termid":"GO:0090273"}


id: PBO:0090366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GRIP domain protein Grp2","termid":"PBO:0090366"}


id: SO:1000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An extra chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_duplication","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_duplication"],"synonyms":[{"name":"(Drosophila)Dp","type":"related"},{"name":"(fungi)Dp","type":"related"},{"name":"chromosomal duplication","type":"exact"}],"termid":"SO:1000037"}


id: PBO:0031428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glycerol_dehydrogenase_activity","termid":"PBO:0031428"}


id: PBO:0058466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5195","termid":"PBO:0058466"}


id: GO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of target genes that are transcribed as part of the S phase of the mitotic cell cycle.","definition_xrefs":["PMID:16912276"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in S-phase of mitotic cell cycle (obsolete GO:0090418)","synonyms":[{"name":"activation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"activation of transcription involved in S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription involved in S-phase of mitotic cell cycle","type":"exact"},{"name":"up-regulation of S phase specific transcription in the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter during S phase of the mitotic cell cycle","type":"related"},{"name":"up-regulation of transcription involved in S phase of mitotic cell cycle","type":"related"}],"termid":"GO:0090418"}


id: GO:1905359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle.","definition_xrefs":["GO_REF:0000087","PMID:26696398","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule cytoskeleton","termid":"GO:0072698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to meiotic spindle","synonyms":[{"name":"protein localisation to meiotic spindle","type":"exact"}],"termid":"GO:1905359"}


id: PBO:0069427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 692, pseudogene","termid":"PBO:0069427"}


id: PBO:0078725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 1-1","termid":"PBO:0078725"}


id: PBO:0082636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of GID Complex that confers ubiquitin ligase (U3) activity; necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; forms dimer with Fyv10p that is then recruited to GID Complex by Gid8p; also required for sporulation; conserved protein that has a degenerate RING finger domain","termid":"PBO:0082636"}


id: PBO:0071934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 11","termid":"PBO:0071934"}


id: GO:0032584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a growth cone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"growth cone membrane","termid":"GO:0032584"}


id: PBO:0070724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 29","termid":"PBO:0070724"}


id: PBO:0053134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 1","termid":"PBO:0053134"}


id: PBO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_localization","termid":"PBO:0031676"}


id: PBO:0055218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2644","termid":"PBO:0055218"}


id: FYPO:0001776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to eisosome filament","synonyms":[{"name":"normal protein localisation to eisosome filament","type":"exact"},{"name":"normal protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"normal protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"normal protein localization to linear eisosome","type":"exact"}],"termid":"FYPO:0001776"}


id: PBO:0048809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 3","termid":"PBO:0048809"}


id: PBO:0077256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 7","termid":"PBO:0077256"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: PBO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 1","termid":"PBO:0047290"}


id: GO:0021879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","PMID:16226447","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron differentiation","termid":"GO:0021879"}


id: PBO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL2 antisense RNA 1","termid":"PBO:0047768"}


id: GO:1905622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"negatively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leaf development","synonyms":[{"name":"down regulation of leaf development","type":"exact"},{"name":"down-regulation of leaf development","type":"exact"},{"name":"downregulation of leaf development","type":"exact"},{"name":"inhibition of leaf development","type":"narrow"}],"termid":"GO:1905622"}


id: GO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an AV node cell to an bundle of His cell via adhesion molecules that results in the cells being juxtaposed so that they can communicate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"},{"relation_name":"is_a","term_name":"cardiac muscle cell-cardiac muscle cell adhesion","termid":"GO:0086042"},{"relation_name":"part_of","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"AV node cell-bundle of His cell adhesion involved in cell communication","synonyms":[{"name":"atrioventricular node cell-bundle of His cell adhesion involved in cell communication","type":"exact"}],"termid":"GO:0086072"}


id: PBO:0062515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 1","termid":"PBO:0062515"}


id: GO:0033316
data:
  {"annotated_genes":["SJAG_04259","SJAG_04126","SJAG_03327","SJAG_01837","SJAG_01082","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97874,102374,112717],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[102373,110549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109850],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a meiotic spindle assembly checkpoint, that delays the metaphase/anaphase transition of a meiotic cell cycle until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle checkpoint signaling","termid":"GO:0044779"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"meiotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072465"],"synonyms":[{"name":"meiotic spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0033316","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0007465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to chromatin over a different spatial extent than normal. The protein may localize to a larger or smaller region than normal, or its localization may be shifted along the length of the chromosome.","definition_xrefs":["PMID:18957202","PMID:31615333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"altered spatial extent of protein localization to chromatin","synonyms":[{"name":"abnormal spatial extent of protein localization to chromatin","type":"exact"},{"name":"altered spatial extent of protein localisation to chromatin","type":"exact"},{"name":"altered spatial extent of protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"altered spatial extent of protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007465"}


id: GO:0030659
data:
  {"annotated_genes":["SJAG_00557","SJAG_02100","SJAG_02282","SJAG_02539","SJAG_00299","SJAG_03250","SJAG_02587","SJAG_01112","SJAG_03153","SJAG_01981","SJAG_04912","SJAG_03511","SJAG_01809","SJAG_04822","SJAG_00192","SJAG_04474","SJAG_07012","SJAG_03892","SJAG_00339","SJAG_03558","SJAG_00301","SJAG_02349","SJAG_00638","SJAG_01242","SJAG_04513","SJAG_04569","SJAG_04391","SJAG_02453","SJAG_03783","SJAG_04936","SJAG_04070","SJAG_05345","SJAG_02234","SJAG_05210","SJAG_04024","SJAG_00108","SJAG_04609","SJAG_00906","SJAG_04002","SJAG_02429","SJAG_05207","SJAG_01939","SJAG_03385","SJAG_05344","SJAG_04349","SJAG_01633","SJAG_01508","SJAG_04565","SJAG_00104","SJAG_00379","SJAG_00416","SJAG_04489","SJAG_03347","SJAG_01167","SJAG_00900","SJAG_01236","SJAG_02482","SJAG_00314","SJAG_00072","SJAG_00800","SJAG_02177","SJAG_04517","SJAG_03907","SJAG_00284","SJAG_02805","SJAG_04023","SJAG_04644"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58956,93496],"is_not":false,"summary":null,"term":"GO:0030659"},{"annotations":[108837,97202,114883,109055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[104395,107648,92362,107707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[108959,90990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[110929,114501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[85049,90285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[109812,113426,94547,94637,112423,89316,99346,103184,100194],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[108031,74068,112640,102628,89454,104789,91615,70490,108768,106269],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[86700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[91996,108512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[98059,98047,94776,85050,60353,103353,106051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010008"},{"annotations":[91655,105862,97154,104090,110248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"},{"annotations":[88101,84280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[105854,106701,107516],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[84112,96964,102621,99221,99804,94054],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[95589,97156,88102,84281,105856,93758,105866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[88218,90020,115392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[94951,108625],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a cytoplasmic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle membrane","termid":"GO:0012506"},{"relation_name":"part_of","term_name":"cytoplasmic 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vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"termid":"GO:0030659","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030659":null,"GO:0030665":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: PBO:0018156
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nse5Ts Suppressor","termid":"PBO:0018156"}


id: GO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by monocytes or macrophages.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by monocytes and macrophages","termid":"GO:0002436"}


id: PBO:0079544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 6","termid":"PBO:0079544"}


id: PBO:0063266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 12","termid":"PBO:0063266"}


id: PBO:0111945
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0111945"}


id: PR:O14319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dentin matrix acidic phosphoprotein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03051","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.02c","secondary_identifiers":["UniProtKB:O14319"],"synonyms":[{"name":"Spom972h-DMP1","type":"exact"}],"termid":"PR:O14319"}


id: GO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of a bacterial-type RNA polymerase core enzyme and a sigma factor, the minimal set of factors required for formation of the preinitiation complex (PIC) by a bacterial-type RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal transcription machinery binding","termid":"GO:0001098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bacterial-type RNA polymerase holo enzyme binding","synonyms":[{"name":"basal bacterial-type RNA polymerase transcription machinery binding","type":"exact"}],"termid":"GO:0001108"}


id: GO:0004630
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92038],"is_not":false,"summary":null,"term":"GO:0004630"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate.","definition_xrefs":["EC:3.1.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phospholipase D activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PHOSCHOL-RXN","Reactome:R-HSA-2029471","Reactome:R-HSA-1483142","Reactome:R-HSA-1483182","RHEA:14445"],"synonyms":[{"name":"choline phosphatase activity","type":"related"},{"name":"lecithinase D activity","type":"related"},{"name":"lipophosphodiesterase II activity","type":"related"},{"name":"phosphatidylcholine phosphatidohydrolase activity","type":"related"}],"termid":"GO:0004630","terms_by_termid":{"GO:0004630":null}}


id: MOD:02057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tryptophan residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tryptophan residue","synonyms":[{"name":"XlnkTrp","type":"exact"}],"termid":"MOD:02057"}


id: GO:0061445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an endocardial cushion cell fate and its capacity to differentiate into an endocardial cushion cell.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cell fate commitment","termid":"GO:0060957"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell fate commitment","termid":"GO:0061445"}


id: PBO:0069767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1050, pseudogene","termid":"PBO:0069767"}


id: PBO:0028980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutathione","termid":"PBO:0028980"}


id: PR:O94578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mic26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.05c","synonyms":[{"name":"Spom972h-mic26","type":"exact"}],"termid":"PR:O94578"}


id: GO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 27 of the histone.","definition_xrefs":["GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 methylation (obsolete GO:0070734)","synonyms":[{"name":"histone H3 K27 methylation","type":"exact"},{"name":"histone H3K27me","type":"exact"},{"name":"histone lysine H3 K27 methylation","type":"exact"}],"termid":"GO:0070734"}


id: PBO:0044406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ccytochrome P450 family 2 subfamily D member 8, pseudogene","termid":"PBO:0044406"}


id: GO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold (obsolete GO:0061411)","termid":"GO:0061411"}


id: GO:0033420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488","GO:0060090"],"is_obsolete":false,"name":"CUG codon-amino acid adaptor activity","synonyms":[{"name":"CTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033420"}


id: GO:0106151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting selectivity and noncovalently with a cyclic nucleotide mimicking protein motif that is part of the same protein. The CNBHD is a domain on KCNH channels that creates a binding pocket on the KCNH channel that resembles the cyclic nucleotide- binding domain on other ion channels. It binds to a peptide motif that is part of the same protein rather than a cyclic nucleotide.","definition_xrefs":["GOC:cvs","PMID:27025590","PMID:29567795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CNBH domain intrinsic ligand binding","termid":"GO:0106151"}


id: GO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoliquiritigenin = 2'-O-methylisoliquiritigenin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.154","RHEA:21608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"isoliquiritigenin 2'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-3501","KEGG_REACTION:R07242"],"synonyms":[{"name":"CHMT","type":"related"},{"name":"S-adenosyl-L-methionine:isoliquiritigenin 2'-O-methyltransferase activity","type":"related"},{"name":"chalcone OMT","type":"related"}],"termid":"GO:0033802"}


id: PBO:0065067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein HaeIII subfamily 1","termid":"PBO:0065067"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: PBO:0087785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sugar alcohol phosphatase; polyol phosphatase that hydrolyzes sorbitol-6-phosphate, ribitol-5-phosphate, and (D)-glycerol-3-phosphate, maintaining phosphoglucose isomerase (PGI) activity in the presence of PGI-inhibitory sugar alcohols; expression correlated with growth rate; GFP-fusion protein localizes to the cytoplasm and nucleus; homozygous diploid mutant displays increased glycogen accumulation; member of the haloacid dehalogenase (HAD) superfamily","termid":"PBO:0087785"}


id: PBO:0059863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin 1","termid":"PBO:0059863"}


id: GO:1903516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single strand break repair.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:BHF","PMID:17395247","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"regulation of single strand break repair","termid":"GO:1903516"}


id: FYPO:0002554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a region of a chromosome at which a DNA double-strand break has occurred is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to double-strand break site","synonyms":[{"name":"normal protein localisation to double-strand break site","type":"exact"},{"name":"normal protein localization to DSB","type":"exact"},{"name":"normal protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"normal protein localization to site of DSB","type":"exact"},{"name":"normal protein localization to site of double-strand break","type":"exact"}],"termid":"FYPO:0002554"}


id: PBO:0024826
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP2","termid":"PBO:0024826"}


id: PBO:0058874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9986","termid":"PBO:0058874"}


id: PBO:0031110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_stress","termid":"PBO:0031110"}


id: SO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A homologous_region that is paralogous to another region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"paralogous","termid":"SO:0000859"},{"relation_name":"is_a","term_name":"homologous_region","termid":"SO:0000853"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Paralog#Paralogy"],"synonyms":[{"name":"paralog","type":"exact"},{"name":"paralogous region","type":"exact"},{"name":"paralogue","type":"exact"}],"termid":"SO:0000854"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: PATO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A growth quality of occurrent in which the growth of an organism, structure or group of organisms does not occur.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth quality of occurrent","termid":"PATO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic growth","synonyms":[{"name":"agenesis","type":"narrow"},{"name":"dysgenesis","type":"narrow"}],"termid":"PATO:0002019"}


id: PBO:0057962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3683","termid":"PBO:0057962"}


id: MOD:01514
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.01 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: PBO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 3","termid":"PBO:0043875"}


id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: PBO:0086351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase sodium pump; involved in Na+ efflux to allow salt tolerance; likely not involved in Li+ efflux","termid":"PBO:0086351"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: PATO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the front and the middle of an organism.","definition_xrefs":["PATOC:JI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteromedially rotated","termid":"PATO:0002399"}


id: GO:0051306
data:
  {"annotated_genes":["SJAG_03353","SJAG_01297","SJAG_01679","SJAG_02186","SJAG_05329","SJAG_02451","SJAG_03048","SJAG_02169","SJAG_02336","SJAG_03350","SJAG_04126","SJAG_02380","SJAG_01330","SJAG_04699","SJAG_01956","SJAG_04968","SJAG_00146","SJAG_03351","SJAG_04259","SJAG_01082","SJAG_01837","SJAG_03126","SJAG_04884","SJAG_02542","SJAG_01805","SJAG_02498","SJAG_00460","SJAG_04661","SJAG_00883","SJAG_04573","SJAG_05236","SJAG_04999","SJAG_00666","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86477,87855,91268,92700,95684,95689,96872,97914,113597],"is_not":false,"summary":null,"term":"GO:0051306"},{"annotations":[110323,111948,103296,104318,86847,95668,108017,109845,99971],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102375,110552,109849,105974,97875,112720,95517,111597,86849],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[102376,111598],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045841"},{"annotations":[99359],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000816"},{"annotations":[90300],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112724],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[107431,98462,89908,93796,110324,110821,98188,96215],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[112726],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905824"},{"annotations":[93797,95690],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901970"},{"annotations":[90301],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04661":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05236":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during mitosis","type":"related"},{"name":"mitotic chromosome separation","type":"related"},{"name":"mitotic sister chromatid resolution","type":"exact"},{"name":"sister chromatid separation during mitosis","type":"exact"}],"termid":"GO:0051306","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0051306":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905824":null,"GO:2000816":null}}


id: PBO:0089822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Spc24","termid":"PBO:0089822"}


id: GO:0018606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 + H+ = NAD+ + HSO3(-) + 4-methylcatechol.","definition_xrefs":["UM-BBD_reactionID:r0295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzenesulfonate dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"synonyms":[{"name":"benzenesulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0018606"}


id: GO:0018740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-hydroxybiphenyl-2-sulfinate + H2O = biphenyl-2-ol + sulfite.","definition_xrefs":["EC:3.13.1.3","RHEA:12945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-sulfur bonds","termid":"GO:0046508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2'-hydroxybiphenyl-2-sulfinate desulfinase activity","secondary_identifiers":["KEGG_REACTION:R07311","MetaCyc:RXN-624","UM-BBD_enzymeID:e0216"],"synonyms":[{"name":"2'-hydroxybiphenyl-2-sulfinate sulfinolyase activity","type":"exact"},{"name":"2'-hydroxybiphenyl-2-sulfinate sulfohydrolase activity","type":"related"},{"name":"2-(2'-hydroxyphenyl)benzenesulfinate desulfinase activity","type":"related"},{"name":"2-(2-hydroxyphenyl) benzenesulfinate sulfohydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl) benzenesulfinate:H2O hydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulfinate desulfinase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulfinate hydrolase activity","type":"related"},{"name":"2-(2-hydroxyphenyl)benzenesulphinate hydrolase activity","type":"exact"},{"name":"DszB","type":"related"},{"name":"HBPSi desulfinase activity","type":"related"},{"name":"HPBS desulfinase activity","type":"related"},{"name":"dibenzothiophene desulfurization enzyme B","type":"related"},{"name":"gene dszB-encoded hydrolase activity","type":"related"}],"termid":"GO:0018740"}


id: GO:0016652
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87919],"is_not":false,"summary":null,"term":"GO:0016652"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.6.1.-"],"synonyms":[{"name":"oxidoreductase activity, acting on NAD or NADPH, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016652","terms_by_termid":{"GO:0016652":null}}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: PBO:0045899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 lysine methyltransferase","termid":"PBO:0045899"}


id: GO:0003733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein (obsolete GO:0003733)","synonyms":[{"name":"ribonucleoprotein","type":"exact"}],"termid":"GO:0003733"}


id: FYPO:0004280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hypoxanthine DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal hypoxanthine DNA N-glycosylase activity","termid":"FYPO:0004279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased hypoxanthine DNA N-glycosylase activity","synonyms":[{"name":"reduced hypoxanthine DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004280"}


id: PATO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001105 absolute strain value (obsolete PATO:0001105)","termid":"PATO:0001105"}


id: GO:0010164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cesium ion","synonyms":[{"name":"response to cesium","type":"exact"}],"termid":"GO:0010164"}


id: PBO:0108959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_deletion_and_mutation","termid":"PBO:0108959"}


id: GO:0021504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the median and lateral hinge points in the neural folds. These are created by apical constriction and basal expansion of the underlying neural cells. The median hinge point extends for the entire length of the neural tube, and the lateral hinge points do not form in the spinal cord region of the neural tube.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","PMID:13679871","GOC:dgh","PMID:15806586","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold bending","termid":"GO:0021503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold hinge point formation","synonyms":[{"name":"neural fold furrowing","type":"narrow"}],"termid":"GO:0021504"}


id: PBO:0070213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 143 pseudogene","termid":"PBO:0070213"}


id: PBO:0053456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 408","termid":"PBO:0053456"}


id: PBO:0003825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane protein Mcp4/Mug101","termid":"PBO:0003825"}


id: GO:0047979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexose + O2 = aldono-1,5-lactone + H202.","definition_xrefs":["EC:1.1.3.5","MetaCyc:HEXOSE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hexose oxidase activity","synonyms":[{"name":"D-hexose:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047979"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0028463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_interphase","termid":"PBO:0028463"}


id: PBO:0051837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunity related GTPase M","termid":"PBO:0051837"}


id: GO:0099039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a sphingolipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"sphingolipid translocation","termid":"GO:0099039"}


id: SO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_3_amino_3_carboxypropyl_uridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_three_amino_three_carboxypropyl_uridine","secondary_identifiers":["RNAMOD:061"],"synonyms":[{"name":"3-(3-amino-3-carboxypropyl)uridine","type":"exact"},{"name":"acp3U","type":"exact"}],"termid":"SO:0001353"}


id: GO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral release from host cell (obsolete GO:0044789)","termid":"GO:0044789"}


id: PBO:0072841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 pseudogene 1","termid":"PBO:0072841"}


id: PBO:0041046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 3","termid":"PBO:0041046"}


id: PBO:0066602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 1","termid":"PBO:0066602"}


id: GO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from host early endosomes by lower lumenal pH and different protein composition. Host late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome","termid":"GO:0044184"}


id: GO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["GOC:jsg","PMID:20516151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein trans-autophosphorylation","synonyms":[{"name":"trans-autophosphorylation","type":"exact"}],"termid":"GO:0036290"}


id: GO:0071739
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["PMID:11282392","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgD immunoglobulin complex, circulating","synonyms":[{"name":"IgD antibody","type":"exact"}],"termid":"GO:0071739"}


id: PBO:0082840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of the TIM23 complex; proposed alternatively to be a component of the import motor (PAM complex) or to interact with and modulate the core TIM23 (Translocase of the Inner mitochondrial Membrane) complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0082840"}


id: RO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is attached to b if and only if a and b are discrete objects or object parts, and there are physical connections between a and b such that a force pulling a will move b, or a force pulling b will move a","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"},{"relation_name":"is_a","term_name":"attached_to_part_of","termid":"RO:0002177"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attached_to","termid":"RO:0002371"}


id: PBO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 15","termid":"PBO:0052691"}


id: FYPO:0005472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate dehydrogenase activity using NAPD+ as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished glutamate dehydrogenase (NADP+) activity","synonyms":[{"name":"abolished NAD(P)H-dependent glutamate dehydrogenase activity","type":"exact"},{"name":"abolished NADP-GDH activity","type":"exact"},{"name":"glutamate dehydrogenase (NADP+) activity abolished","type":"exact"}],"termid":"FYPO:0005472"}


id: PBO:0038808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 12","termid":"PBO:0038808"}


id: PBO:0073855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A4","termid":"PBO:0073855"}


id: PBO:0034340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_breakdown_of","termid":"PBO:0034340"}


id: PBO:0030598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_vacuole","termid":"PBO:0030598"}


id: PBO:0083245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensive overlap with PGA2/YNL149C, an uncharacterized gene with a proposed role in protein trafficking","termid":"PBO:0083245"}


id: GO:1900927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-threonine import into cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-threonine import across plasma membrane","termid":"GO:1900926"},{"relation_name":"negatively_regulates","term_name":"L-threonine import across plasma membrane","termid":"GO:1903807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-threonine import across plasma membrane","synonyms":[{"name":"down regulation of L-threonine import","type":"exact"},{"name":"down regulation of L-threonine uptake","type":"related"},{"name":"down-regulation of L-threonine import","type":"exact"},{"name":"down-regulation of L-threonine uptake","type":"related"},{"name":"downregulation of L-threonine import","type":"exact"},{"name":"downregulation of L-threonine uptake","type":"related"},{"name":"inhibition of L-threonine import","type":"narrow"},{"name":"inhibition of L-threonine uptake","type":"narrow"},{"name":"negative regulation of L-threonine uptake","type":"related"}],"termid":"GO:1900927"}


id: PBO:0076915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 gamma","termid":"PBO:0076915"}


id: PBO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_thiamine_starvation","termid":"PBO:0030373"}


id: PBO:0069602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 879, pseudogene","termid":"PBO:0069602"}


id: PR:P87216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.06","synonyms":[{"name":"Spom972h-vip1","type":"exact"}],"termid":"PR:P87216"}


id: PBO:0075483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 1","termid":"PBO:0075483"}


id: MOD:00412
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod artifact. OBSOLETE because Unimod entry 19 is now merged with Unimod 35 remap to MOD:00425 'monohydroxylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00412 oxidation (obsolete MOD:00412)","termid":"MOD:00412"}


id: PBO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVIII alpha 1 chain","termid":"PBO:0043586"}


id: GO:0048498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of petals with reference to the central axis.","definition_xrefs":["PMID:10572040","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of floral organ orientation","termid":"GO:0048559"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of petal orientation","termid":"GO:0048498"}


id: PBO:0084645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule plus-end-tracking non-motor protein; binds to MTs, stabilizing interpolar MT plus ends, facilitating polymerization of spindle MTs and producing an outward force on spindle poles; required for structural integrity of the mitotic spindle; binds detached kinetochores (KTs) and promotes capture; relocalizes to MTs and stabilizes the spindle once captured KTs reach a spindle pole; localizes to the spindle, spindles poles, and detached KTs; CLASP family member homologous to human CLASP1/2","termid":"PBO:0084645"}


id: GO:0019231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perception of the orientation of different parts of the body with respect to one another.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perception of static position","termid":"GO:0019231"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: PBO:0075399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP140 nuclear body protein","termid":"PBO:0075399"}


id: PBO:0084465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG1 has a paralog, DIG2, that arose from the whole genome duplication","termid":"PBO:0084465"}


id: PBO:0041136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 19","termid":"PBO:0041136"}


id: GO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear interphase chromosome (obsolete GO:0000232)","synonyms":[{"name":"nuclear interphase chromosome","type":"exact"}],"termid":"GO:0000232"}


id: PATO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of not being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inconspicuous","synonyms":[{"name":"faint","type":"related"}],"termid":"PATO:0000464"}


id: GO:0034956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphenyl ether + NADH + O2 + H+ = phenol + catechol + NAD+.","definition_xrefs":["UM-BBD_reactionID:r1453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diphenyl ether 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034956"}


id: PBO:0071765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 12","termid":"PBO:0071765"}


id: PBO:0087263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein phosphatase Z, isoform of Ppz2p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance","termid":"PBO:0087263"}


id: PBO:0067470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 600, pseudogene","termid":"PBO:0067470"}


id: PBO:0064274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G7","termid":"PBO:0064274"}


id: PBO:0041745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 2","termid":"PBO:0041745"}


id: GO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction via a phosphorelay signal transduction system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorelay signal transduction system","termid":"GO:0070297"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"phosphorelay signal transduction system","termid":"GO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of phosphorelay signal transduction system","synonyms":[{"name":"activation of two-component signal transduction","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay)","type":"narrow"},{"name":"stimulation of two-component signal transduction","type":"narrow"},{"name":"up regulation of two-component signal transduction","type":"exact"},{"name":"up-regulation of two-component signal transduction","type":"exact"},{"name":"upregulation of two-component signal transduction","type":"exact"}],"termid":"GO:0070299"}


id: GO:0006417
data:
  {"annotated_genes":["SJAG_00423","SJAG_04544","SJAG_01079","SJAG_03550","SJAG_00690","SJAG_04159","SJAG_00786","SJAG_03677","SJAG_02189","SJAG_02592","SJAG_03501","SJAG_00892","SJAG_04130","SJAG_00169","SJAG_01047","SJAG_04085","SJAG_16454","SJAG_00600","SJAG_02285","SJAG_02467","SJAG_01436","SJAG_04452","SJAG_01942","SJAG_02723","SJAG_05265","SJAG_04291","SJAG_02638","SJAG_02043","SJAG_05000","SJAG_00251","SJAG_04873","SJAG_03869","SJAG_02072","SJAG_01058","SJAG_02026","SJAG_04890","SJAG_01517","SJAG_04756","SJAG_04959","SJAG_01249","SJAG_00579","SJAG_04383","SJAG_00642","SJAG_02812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110904,95525,91697,114232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[108214,87415,105742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[88913,111656,88616,105743,90468,95417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[102716,113158,84725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[97989,94794,108727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[96535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[65692,67546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[97083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[65693,90905,67547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[92316,101301,105775,98655,96794,86398,107220,96349,108453,112865,92181,113482,95530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[106220,91568,105557,110036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[91325,100037,99408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[99178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[107772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00251":null,"SJAG_00423":null,"SJAG_00579":null,"SJAG_00600":null,"SJAG_00642":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00892":null,"SJAG_01047":null,"SJAG_01058":null,"SJAG_01079":null,"SJAG_01249":null,"SJAG_01436":null,"SJAG_01517":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02043":null,"SJAG_02072":null,"SJAG_02189":null,"SJAG_02285":null,"SJAG_02467":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_02723":null,"SJAG_02812":null,"SJAG_03501":null,"SJAG_03550":null,"SJAG_03677":null,"SJAG_03869":null,"SJAG_04085":null,"SJAG_04130":null,"SJAG_04159":null,"SJAG_04291":null,"SJAG_04383":null,"SJAG_04452":null,"SJAG_04544":null,"SJAG_04756":null,"SJAG_04873":null,"SJAG_04890":null,"SJAG_04959":null,"SJAG_05000":null,"SJAG_05265":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006445"],"synonyms":[{"name":"regulation of protein anabolism","type":"exact"},{"name":"regulation of protein biosynthesis","type":"exact"},{"name":"regulation of protein formation","type":"exact"},{"name":"regulation of protein synthesis","type":"exact"}],"termid":"GO:0006417","terms_by_termid":{"GO:0006449":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0070131":null,"GO:0070134":null,"GO:0140018":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: PBO:0062373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 15 pseudogene","termid":"PBO:0062373"}


id: GO:0048863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.","definition_xrefs":["CL:0000034","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem cell differentiation","secondary_identifiers":["Wikipedia:Stem_cell_differentiation"],"termid":"GO:0048863"}


id: PATO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green","termid":"PATO:0000320"}


id: GO:0010671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010671)","synonyms":[{"name":"negative regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010671"}


id: PBO:0083360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene RPS2/YGL123W","termid":"PBO:0083360"}


id: GO:0030697
data:
  {"annotated_genes":["SJAG_04736"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94177],"is_not":false,"summary":null,"term":"GO:0030697"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + uridine54 in tRNA = 5-methyluridine54 in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04736":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0140101","GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.35","GO:0009021","MetaCyc:TRNA-URACIL-5--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"M5U-methyltransferase activity","type":"related"},{"name":"RUMT","type":"broad"},{"name":"RUMT activity","type":"related"},{"name":"S-adenosyl methionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA (uracil-5-)-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity","type":"exact"},{"name":"ribothymidyl synthase activity","type":"broad"},{"name":"tRNA (uracil(54)-C(5))-methyltransferase activity, S-adenosyl methionine-dependent","type":"exact"},{"name":"tRNA (uracil-5-)-methyltransferase activity","type":"broad"},{"name":"tRNA uracil 5-methyltransferase activity","type":"related"},{"name":"tRNA:m(5)U54-methyltransferase activity","type":"related"},{"name":"tRNA:m5U54-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil 5-methyltransferase activity","type":"related"},{"name":"transfer RNA uracil methylase activity","type":"related"}],"termid":"GO:0030697","terms_by_termid":{"GO:0030697":null}}


id: PBO:0082259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amidase; removes the amide group from N-terminal asparagine and glutamine residues to generate proteins with N-terminal aspartate and glutamate residues that are targets of ubiquitin-mediated degradation","termid":"PBO:0082259"}


id: PBO:0047457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 1","termid":"PBO:0047457"}


id: GO:0090017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of anterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate formation","termid":"GO:0021990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural plate formation","termid":"GO:0090017"}


id: GO:0009118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleoside metabolic process","synonyms":[{"name":"regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0009118"}


id: MOD:00093
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartic acid 1-amide.","definition_xrefs":["PubMed:2542051","RESID:AA0084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-butanediamic acid","type":"exact"},{"name":"1-amidated L-aspartic acid","type":"exact"},{"name":"3,4-diamino-4-oxobutanoic acid","type":"exact"},{"name":"3-amino-succinamic acid","type":"exact"},{"name":"AspN","type":"exact"},{"name":"L-aspartic acid 1-amide","type":"exact"},{"name":"MOD_RES Aspartic acid 1-amide","type":"exact"},{"name":"alpha-asparagine","type":"exact"},{"name":"isoasparagine","type":"exact"}],"termid":"MOD:00093"}


id: PBO:0064344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A2","termid":"PBO:0064344"}


id: PBO:0056498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 2B","termid":"PBO:0056498"}


id: PBO:0087099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); nuclear SET-domain containing protein","termid":"PBO:0087099"}


id: PBO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polysaccharide_level","termid":"PBO:0030720"}


id: PBO:0051298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-33","termid":"PBO:0051298"}


id: PBO:0078546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 37","termid":"PBO:0078546"}


id: PBO:0039099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 3","termid":"PBO:0039099"}


id: GO:0040022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of female sex and sexual phenotype in the germ-line of the hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite germ-line sex determination","termid":"GO:0040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feminization of hermaphroditic germ-line","termid":"GO:0040022"}


id: PBO:0049399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1 like","termid":"PBO:0049399"}


id: PBO:0072333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 19","termid":"PBO:0072333"}


id: PBO:0050328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 30","termid":"PBO:0050328"}


id: FYPO:0000324
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115443,115444,115445],"is_not":false,"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the mitotic cell cycle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased duration of mitotic M phase","termid":"FYPO:0000274"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mitotic metaphase/anaphase transition delay","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000393","FYPO:0004309"],"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle passage through the metaphase-anaphase transition: delayed","type":"related"},{"name":"delayed cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"delayed mitotic anaphase B","type":"narrow"},{"name":"delayed mitotic metaphase/anaphase transition","type":"exact"},{"name":"delayed onset of anaphase B during mitotic cell cycle","type":"narrow"},{"name":"delayed onset of mitotic anaphase","type":"exact"},{"name":"delayed onset of mitotic anaphase B","type":"narrow"},{"name":"delayed onset of mitotic anaphase B during vegetative growth","type":"narrow"},{"name":"increased duration of metaphase during mitosis","type":"related"},{"name":"increased duration of mitotic metaphase","type":"related"},{"name":"metaphase/anaphase transition delay during mitotic cell cycle","type":"exact"},{"name":"mitotic anaphase delay","type":"exact"},{"name":"mitotic cell cycle delay at metaphase/anaphase transition","type":"exact"},{"name":"mitotic metaphase/anaphase transition delay during vegetative growth","type":"exact"},{"name":"transient cell cycle arrest in mitotic metaphase","type":"exact"}],"termid":"FYPO:0000324","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: PBO:0086550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL028W is not an essential gene","termid":"PBO:0086550"}


id: GO:0010494
data:
  {"annotated_genes":["SJAG_04427","SJAG_16454","SJAG_00686","SJAG_03276","SJAG_02239","SJAG_04480","SJAG_04640","SJAG_04772","SJAG_01548","SJAG_00391","SJAG_03696","SJAG_03762","SJAG_01222","SJAG_02419","SJAG_02592","SJAG_04744","SJAG_03283","SJAG_01159","SJAG_04342","SJAG_03424","SJAG_03214","SJAG_02628","SJAG_00474","SJAG_04672","SJAG_05010","SJAG_02164","SJAG_03498","SJAG_16457","SJAG_00544","SJAG_02995","SJAG_02663","SJAG_01026","SJAG_05694","SJAG_01512","SJAG_01954","SJAG_01479","SJAG_03023","SJAG_01317","SJAG_03157","SJAG_02573","SJAG_03277","SJAG_00507","SJAG_02263","SJAG_01650"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72005,73637,78351,83678,84514,85293,85613,85828,86033,86321,86396,86438,86448,86486,87648,88648,89100,89101,90462,90652,90653,90881,92184,93208,93882,94603,95011,95996,98822,101256,101368,101634,101719,101720,102727,103000,105945,106046,107130,108057,109380,109603,109681,113309],"is_not":false,"summary":null,"term":"GO:0010494"}]},"cv_name":"cellular_component","definition":"A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress.","definition_xrefs":["GOC:ans","PMID:17284590","PMID:17601829","PMID:20368989","PMID:17967451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_01026":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01650":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02663":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03498":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_04342":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic stress granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Stress_granule"],"synonyms":[{"name":"cytoplasmic mRNP granule","type":"exact"},{"name":"stress granule","type":"exact"}],"termid":"GO:0010494","terms_by_termid":{"GO:0010494":null}}


id: PBO:0088189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger protein of unknown function","termid":"PBO:0088189"}


id: PBO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 7","termid":"PBO:0051740"}


id: FYPO:0007048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type) during a cellular stress response to zinc ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal alkaline phosphatase activity during stress response to zinc ion","synonyms":[{"name":"normal alkaline phosphatase activity during cellular response to excess zinc","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to high zinc level","type":"exact"},{"name":"normal alkaline phosphatase activity during cellular response to replete zinc","type":"related"},{"name":"normal alkaline phosphatase activity during cellular stress response to zinc ion","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc ion stress","type":"exact"},{"name":"normal alkaline phosphatase activity during response to zinc toxicity","type":"related"},{"name":"normal alkaline phosphatase activity during stress response to zinc","type":"broad"}],"termid":"FYPO:0007048"}


id: PBO:0082220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-agglutinin of alpha-cells; binds to Aga1p during agglutination, N-terminal half is homologous to the immunoglobulin superfamily and contains binding site for a-agglutinin, C-terminal half is highly glycosylated and contains GPI anchor","termid":"PBO:0082220"}


id: FYPO:0007644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal in subtelomeric regions occurs during G0 phase.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during G0","termid":"FYPO:0007641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during G0","synonyms":[{"name":"decreased histone H3 K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomere during G0","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during cell quiescence","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during quiescence","type":"related"},{"name":"decreased histone H3K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"decreased histone H3K9me2 dimethylation at subtelomeric heterochromatin during G0","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at subtelomeric heterochromatin during G0","type":"exact"}],"termid":"FYPO:0007644"}


id: FYPO:0003106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that remain at a consistent length over successive generations.","definition_xrefs":["PomBase:mah","PMID:24013504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"stable shortened telomeres during vegetative growth","synonyms":[{"name":"stable decreased telomere length during vegetative growth","type":"exact"},{"name":"stable shortened telomeres during mitotic cell cycle","type":"related"},{"name":"stably shortened telomeres during vegetative growth","type":"exact"}],"termid":"FYPO:0003106"}


id: GO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location that contributes to cytokinesis during cell cycle.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071342)","termid":"GO:0071342"}


id: GO:0033703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-5beta-pregnane-20-one + NADP+ = 5beta-pregnan-3,20-dione + H+ + NADPH.","definition_xrefs":["EC:1.1.1.277","RHEA:22944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-5beta-steroid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R06166","MetaCyc:1.1.1.277-RXN"],"synonyms":[{"name":"3beta-hydroxy-5beta-steroid:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-oxidoreductase activity","type":"related"},{"name":"3beta-hydroxysteroid 5beta-progesterone oxidoreductase activity","type":"related"}],"termid":"GO:0033703"}


id: PBO:0041949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 1, beta catenin antagonist","termid":"PBO:0041949"}


id: PBO:0085235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pentafunctional arom protein; catalyzes steps 2 through 6 in the biosynthesis of chorismate, which is a precursor to aromatic amino acids","termid":"PBO:0085235"}


id: PBO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 16 (pseudogene)","termid":"PBO:0044727"}


id: PBO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 7","termid":"PBO:0043512"}


id: GO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol import by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11533229","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol import by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035969)","synonyms":[{"name":"positive regulation of sterol import by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of sterol import by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol import by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol influx by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of sterol uptake by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035969"}


id: GO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte proliferation","termid":"GO:0010838"}


id: PBO:0088190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger protein of unknown function; possibly involved in pre-tRNA splicing and in uptake of branched-chain amino acids; STP3 has a paralog, STP4, that arose from the whole genome duplication","termid":"PBO:0088190"}


id: FYPO:0004550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein phosphorylation during cellular response to HU","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004550"}


id: FYPO:0006321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is decreased.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"decreased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0006321"}


id: PBO:0065125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D3","termid":"PBO:0065125"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: GO:0102956
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + sinapoyl aldehyde = H+ + sinapaldehyde glucoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:sinapaldehyde 4-beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:57712","MetaCyc:RXN-92"],"termid":"GO:0102956"}


id: PBO:0062678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily K member 1","termid":"PBO:0062678"}


id: GO:0008779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + O-(2-acyl-sn-glycero-3-phospho)ethanolamine = [acyl-carrier protein] + O-(1-beta-acyl-2-acyl-sn-glycero-3-phospho)ethanolamine.","definition_xrefs":["EC:2.3.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity","secondary_identifiers":["MetaCyc:ACYLGPEACYLTRANS-RXN","RHEA:10304"],"synonyms":[{"name":"acyl-ACP-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-phospholipid O-acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:O-(2-acyl-sn-glycero-3-phospho)-ethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0008779"}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.17.5.1","MetaCyc:1.17.5.1-RXN","KEGG_REACTION:R07222"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: GO:0016409
data:
  {"annotated_genes":["SJAG_02305","SJAG_04178","SJAG_01112","SJAG_00895","SJAG_01299","SJAG_04451"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99192,104345,92002,106216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"},{"annotations":[88885,101599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_02305":null,"SJAG_04178":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203567","Reactome:R-HSA-5686304"],"termid":"GO:0016409","terms_by_termid":{"GO:0004758":null,"GO:0019706":null}}


id: PBO:0083701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated chaperone involved in protein targeting; redirects mitochondrial membrane protein precursors to mitochondrial translocation system; required for peroxisomal protein import and involved in peroxisome assembly; facilitates import of Mim1p and Mim2p into the mitochondrial outer membrane; homologous to E. coli DnaJ","termid":"PBO:0083701"}


id: PBO:0090776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein Meu6","termid":"PBO:0090776"}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016788","GO:0140101","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"Ala-tRNA(Pro) hydrolase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: PBO:0108777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0108777"}


id: PBO:0081506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 410","termid":"PBO:0081506"}


id: PBO:0071186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 27","termid":"PBO:0071186"}


id: GO:0018483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxohexanoate + NADP+ + H2O = adipate + NADPH + H+.","definition_xrefs":["EC:1.2.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-oxohexanoate dehydrogenase activity","secondary_identifiers":["MetaCyc:6-OXOHEXANOATE-OXIDATION-RXN","RHEA:13397","UM-BBD_reactionID:r0175"],"synonyms":[{"name":"6-oxohexanoate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018483"}


id: PBO:0089764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","termid":"PBO:0089764"}


id: GO:0072338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactam metabolic process","synonyms":[{"name":"cellular lactam metabolic process","type":"exact"},{"name":"cellular lactam metabolism","type":"exact"}],"termid":"GO:0072338"}


id: PBO:0029525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_normal_volume_spheroid_vegetative_cell","termid":"PBO:0029525"}


id: GO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four different subunits that possesses ADPG pyrophosphorylase activity. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"heterotetrameric ADPG pyrophosphorylase complex","termid":"GO:0030931"}


id: PBO:0034207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intercellular_endoparasite_of","termid":"PBO:0034207"}


id: PBO:0084499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for chromosome synapsis; displays Red1p dependent localization to the unsynapsed axial-lateral elements of the synaptonemal complex; required for chiasma formation; in vitro, displays the ability to promote intra- and intermolecular synapsis between double-stranded DNA molecules and to fold DNA into rigid protein-DNA filaments","termid":"PBO:0084499"}


id: GO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of nitric oxide synthase.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:17242280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"nitric-oxide synthase regulator activity","termid":"GO:0030235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"nitric-oxide synthase inhibitor activity","synonyms":[{"name":"NOS inhibitor activity","type":"exact"},{"name":"nitric oxide synthase inhibitor activity","type":"exact"}],"termid":"GO:0036487"}


id: FYPO:0006336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal during mitosis.","definition_xrefs":["PMID:8834801","GO:0051418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic microtubule nucleation","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during mitosis","type":"exact"},{"name":"decreased microtubule nucleation during M phase of mitotic cell cycle","type":"related"},{"name":"decreased microtubule nucleation during mitosis","type":"exact"},{"name":"decreased mitotic microtubule nucleation during vegetative growth","type":"exact"},{"name":"reduced mitotic microtubule nucleation","type":"exact"}],"termid":"FYPO:0006336"}


id: PBO:0000763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu31","termid":"PBO:0000763"}


id: GO:2000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inorganic anion transmembrane transport","termid":"GO:1903796"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"negatively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphate transmembrane transport","synonyms":[{"name":"negative regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000186"}


id: PBO:0003739
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.205","termid":"PBO:0003739"}


id: PBO:0065853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 4","termid":"PBO:0065853"}


id: PBO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member A","termid":"PBO:0047215"}


id: PBO:0071364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 23","termid":"PBO:0071364"}


id: PBO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.-","termid":"PBO:0001122"}


id: PBO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex bromodomain subunit Brf1","termid":"PBO:0005610"}


id: PBO:0081693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 615","termid":"PBO:0081693"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: PBO:0027775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","termid":"PBO:0027775"}


id: PBO:0004376
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.39","termid":"PBO:0004376"}


id: GO:0070976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-Interleukin receptor (TIR) domain of a protein. The TIR domain is an intracellular 200 residue domain that is found in the Toll protein, the interleukin-1 receptor (IL-1R), and MyD88; it contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components.","definition_xrefs":["GOC:mah","InterPro:IPR000157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TIR domain binding","synonyms":[{"name":"Toll-Interleukin receptor domain binding","type":"exact"}],"termid":"GO:0070976"}


id: PBO:0060796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 2","termid":"PBO:0060796"}


id: FYPO:0000351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002946","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall morphology during vegetative growth","synonyms":[{"name":"abnormal cell wall morphology during mitotic cell cycle","type":"related"},{"name":"cell wall morphology: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000351"}


id: GO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin3 (DDX20), Gemin4, and Gemin5, and can bind to snRNAs; may be an intermediate in SMN complex assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Gemin3-Gemin4-Gemin5 complex","termid":"GO:0034716"}


id: PR:000085731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me(K9),UnPhos(S10)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"exact"},{"name":"hht3/Me(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085731"}


id: PBO:0039858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23","termid":"PBO:0039858"}


id: PBO:0090765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mei3 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090765"}


id: PBO:0084398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084398"}


id: PBO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-OG-Fe(II) oxygenase superfamily protein","termid":"PBO:0002404"}


id: GO:0048523
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