# terms

id: PBO:0064367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 1","termid":"PBO:0064367"}


id: PBO:0088935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine 5'-monophosphoramidase","termid":"PBO:0088935"}


id: PBO:0048019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1","termid":"PBO:0048019"}


id: GO:0098713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of leucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine import across plasma membrane (obsolete GO:0098713)","synonyms":[{"name":"L-leucine import into cell","type":"narrow"},{"name":"leucine import into cell","type":"exact"}],"termid":"GO:0098713"}


id: PBO:0050360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 63","termid":"PBO:0050360"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: GO:0035530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","PMID:19812544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 6 production","synonyms":[{"name":"CCL6 production","type":"exact"}],"termid":"GO:0035530"}


id: GO:1901054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sarcosine.","definition_xrefs":["PMID:31402327","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"sarcosine biosynthetic process","synonyms":[{"name":"sarcosine anabolism","type":"exact"},{"name":"sarcosine biosynthesis","type":"exact"},{"name":"sarcosine formation","type":"exact"},{"name":"sarcosine synthesis","type":"exact"}],"termid":"GO:1901054"}


id: GO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tissue remodeling process by which the Sertoli cell barrier is temporarily disrupted and reorganized to accommodate the transit of preleptotene spermatocytes at stage VIII of the epithelial cycle.","definition_xrefs":["PMID:20534520","PMID:24467744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell barrier remodeling","synonyms":[{"name":"SCB remodeling","type":"exact"},{"name":"Sertoli cell barrier remodelling","type":"exact"},{"name":"Sertoli cell barrier restructuring","type":"exact"},{"name":"blood testis barrier restructuring","type":"broad"},{"name":"restructuring of BTB","type":"broad"},{"name":"restructuring of SCB","type":"exact"},{"name":"restructuring of blood-testis barrier","type":"broad"}],"termid":"GO:0061843"}


id: PBO:0086635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YGL036W is not an essential gene","termid":"PBO:0086635"}


id: FYPO:0002363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002363"}


id: RO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_ubiquitination","termid":"RO:0002482"}


id: PBO:0111929
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0111929"}


id: PBO:0051038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like and fibronectin type III domain containing 1","termid":"PBO:0051038"}


id: PBO:0066353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1 pseudogene 1","termid":"PBO:0066353"}


id: SO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that is generally found only in the cytoplasm.","direct_ancestors":[{"relation_name":"has_quality","term_name":"scRNA_encoding","termid":"SO:0000575"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_gene","synonyms":[{"name":"scRNA gene","type":"exact"}],"termid":"SO:0001266"}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["RHEA:23820","EC:4.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["Reactome:R-HSA-6787632","KEGG_REACTION:R00888","MetaCyc:GDPMANDEHYDRA-RXN"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: PBO:0066209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 2","termid":"PBO:0066209"}


id: FYPO:0000508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of nuclear export is decreased. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nuclear export","synonyms":[{"name":"decreased nuclear export during mitotic cell cycle","type":"related"},{"name":"decreased nuclear export during vegetative growth","type":"exact"},{"name":"nuclear export: decreased","type":"related"},{"name":"reduced nuclear export","type":"exact"}],"termid":"FYPO:0000508"}


id: PR:Q9UTN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00402","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxaloacetate transport protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.02c","secondary_identifiers":["UniProtKB:Q9UTN1"],"synonyms":[{"name":"Spom972h-SLC25A34","type":"exact"}],"termid":"PR:Q9UTN1"}


id: PBO:0056035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene B4 receptor 2","termid":"PBO:0056035"}


id: GO:0072157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to distal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"distal tubule morphogenesis","termid":"GO:0072156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in distal tubule morphogenesis","termid":"GO:0072157"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: FYPO:0000474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiosis","synonyms":[{"name":"abolished meiotic nuclear division","type":"exact"},{"name":"absent meiosis","type":"exact"},{"name":"meiosis abolished","type":"exact"},{"name":"meiosis: absent","type":"related"}],"termid":"FYPO:0000474"}


id: PBO:0005783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase beta subunit (predicted)","termid":"PBO:0005783"}


id: GO:1902809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:TermGenie","PMID:17879321","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"}


id: GO:1901028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mitochondrial outer membrane permeabilization","termid":"GO:0097345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway","synonyms":[{"name":"regulation of MOMP","type":"exact"},{"name":"regulation of mitochondrial outer membrane permeabilization","type":"broad"}],"termid":"GO:1901028"}


id: PBO:0075821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS nuclear autoantigen 1","termid":"PBO:0075821"}


id: GO:1903817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["PMID:19219384","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of voltage-gated potassium channel activity","synonyms":[{"name":"down regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903817"}


id: PBO:0018224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med1","termid":"PBO:0018224"}


id: FYPO:0001286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphoinositide measured in a cell is higher than normal. A phosphoinositide is any phosphatidylinositol that is phosphorylated at one or more of the hydroxy groups of inositol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"},{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular phosphoinositide level","synonyms":[{"name":"increased PI accumulation","type":"related"},{"name":"increased cellular PI level","type":"related"},{"name":"increased cellular phosphoinositide level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphoinositide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001286"}


id: PBO:0060122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 23","termid":"PBO:0060122"}


id: PBO:0071600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 17","termid":"PBO:0071600"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: GO:0098536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles.","definition_xrefs":["PMID:24075808","PMID:5661997","GOC:dos","GOC:cilia","PMID:25047614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deuterosome","termid":"GO:0098536"}


id: GO:0097203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip or margin of the progressing circular lamella that engulfs a particle during phagocytosis. When the two lips of the cup fuse it is converted into a phagosome.","definition_xrefs":["GOC:pf","PMID:20200225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"phagocytic cup lip","termid":"GO:0097203"}


id: PBO:0044268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 8","termid":"PBO:0044268"}


id: GO:0008765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["EC:6.3.2.13","RHEA:23676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity","secondary_identifiers":["KEGG_REACTION:R02788","MetaCyc:UDP-NACMURALGLDAPLIG-RXN"],"synonyms":[{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:(L)-meso-2,6-diaminoheptanedioate gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-2,6-diamino-heptanedioate ligase (ADP-forming) activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl-tripeptide synthetase activity","type":"related"}],"termid":"GO:0008765"}


id: GO:1900103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"positive regulation of response to endoplasmic reticulum stress","termid":"GO:1905898"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"activation of ER unfolded protein response","type":"exact"},{"name":"activation of SREBP-mediated signalling pathway","type":"related"},{"name":"activation of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"activation of erUPR","type":"exact"},{"name":"positive regulation of ER unfolded protein response","type":"exact"},{"name":"positive regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"positive regulation of erUPR","type":"exact"},{"name":"up regulation of ER unfolded protein response","type":"exact"},{"name":"up regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up regulation of erUPR","type":"exact"},{"name":"up-regulation of ER unfolded protein response","type":"exact"},{"name":"up-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"up-regulation of erUPR","type":"exact"},{"name":"upregulation of ER unfolded protein response","type":"exact"},{"name":"upregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"upregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"upregulation of erUPR","type":"exact"}],"termid":"GO:1900103"}


id: FYPO:0009107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which the microtubule-driven movement of daughter nuclei away from the cell tips after mitotic spindle dissambly occurs at a faster speed than normal during telophase.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased nuclear movement velocity during mitotic telophase","synonyms":[{"name":"increased nuclear displacement speed during telophase","type":"exact"},{"name":"increased nuclear displacement velocity during telophase","type":"exact"},{"name":"increased nuclear movement speed during telophase","type":"exact"}],"termid":"FYPO:0009107"}


id: PBO:0064784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1E","termid":"PBO:0064784"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: PBO:0073778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 11","termid":"PBO:0073778"}


id: PBO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 1","termid":"PBO:0062132"}


id: PBO:0049823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain containing 2","termid":"PBO:0049823"}


id: GO:0018654
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyphenylacetate + NADH + O2 = NAD+ + OH- + homogentisate.","definition_xrefs":["PMID:8919815","UM-BBD_reactionID:r0252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-phenylacetate hydroxylase activity","termid":"GO:0018654"}


id: PBO:0080308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 72 pseudogene","termid":"PBO:0080308"}


id: GO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by a steroid hormone binding to a receptor.","definition_xrefs":["PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"steroid hormone mediated signaling pathway","synonyms":[{"name":"steroid hormone mediated signalling","type":"exact"}],"termid":"GO:0043401"}


id: FYPO:0005410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during mitosis. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during mitosis","synonyms":[{"name":"normal protein breakdown during mitosis","type":"exact"},{"name":"normal protein catabolic process during mitosis","type":"exact"},{"name":"normal protein catabolism during mitosis","type":"exact"},{"name":"normal protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein degradation during mitotic M phase","type":"related"},{"name":"normal protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005410"}


id: PBO:0090226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S2","termid":"PBO:0090226"}


id: PBO:0057886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3190","termid":"PBO:0057886"}


id: FYPO:0006818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere outer repeat","termid":"FYPO:0002842"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at centromere outer repeat","synonyms":[{"name":"decreased protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to chromatin at centromere otr","type":"exact"},{"name":"decreased protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at pericentric region during vegetative growth","type":"related"},{"name":"decreased protein localization to chromatin at pericentromeric region during vegetative growth","type":"related"},{"name":"reduced protein localization to chromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0006818"}


id: GO:0097213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"is_a","term_name":"lysosomal membrane organization","termid":"GO:0097212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of lysosomal membrane permeability","synonyms":[{"name":"regulation of lysosome membrane permeability","type":"exact"}],"termid":"GO:0097213"}


id: PBO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2549","termid":"PBO:0055130"}


id: GO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell as part of an immune response.","definition_xrefs":["GOC:add","PMID:12093005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"},{"relation_name":"is_a","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002298"}


id: PBO:0035795
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion_during_vegetative_growth","termid":"PBO:0035795"}


id: PBO:0054262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1647","termid":"PBO:0054262"}


id: PBO:0049175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 10","termid":"PBO:0049175"}


id: PBO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Rqh1","termid":"PBO:0000617"}


id: PBO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family protein","termid":"PBO:0001979"}


id: GO:1905522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration.","definition_xrefs":["PMID:25749876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"negatively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage migration","synonyms":[{"name":"down regulation of macrophage migration","type":"exact"},{"name":"down-regulation of macrophage migration","type":"exact"},{"name":"downregulation of macrophage migration","type":"exact"},{"name":"inhibition of macrophage migration","type":"narrow"}],"termid":"GO:1905522"}


id: PBO:0109605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A12","termid":"PBO:0109605"}


id: GO:2001067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pullulan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pullulan binding","termid":"GO:2001067"}


id: PBO:0109351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA sno530","termid":"PBO:0109351"}


id: PBO:0030905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_vegetative_growth","termid":"PBO:0030905"}


id: FYPO:0005281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains DNA broken into small fragments when the cell is exposed to ionizing radiation.","definition_xrefs":["PMID:1594599","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation (obsolete FYPO:0005281)","synonyms":[{"name":"elongated inviable cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated cell with fragmented DNA during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to gamma radiation","type":"narrow"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during cellular response to ionizing radiation","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented DNA during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005281"}


id: PBO:0028528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_rDNA","termid":"PBO:0028528"}


id: PATO:0001070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001070 absolute density (obsolete PATO:0001070)","termid":"PATO:0001070"}


id: GO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ossification","synonyms":[{"name":"regulation of bone biosynthesis","type":"exact"},{"name":"regulation of bone formation","type":"exact"}],"termid":"GO:0030278"}


id: FYPO:0007834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 3' end, and less at the 5' end, than normal.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes","synonyms":[{"name":"decreased protein localization to chromatin at 5' end of RNA polymerase II-transcribed genes with increased localization towards 3' end","type":"exact"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0007834"}


id: PBO:0081058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC14 divergent transcript","termid":"PBO:0081058"}


id: PBO:0028327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_degradation_during_mitosis","termid":"PBO:0028327"}


id: PBO:0062335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 74","termid":"PBO:0062335"}


id: PBO:0034407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptionally_regulates_(obsolete_transcriptionally_regulates)","termid":"PBO:0034407"}


id: GO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid whose main function is to synthesize and store starch.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast","secondary_identifiers":["Wikipedia:Amyloplast"],"termid":"GO:0009501"}


id: GO:2000342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904208"],"synonyms":[{"name":"inhibition of CCL2 secretion","type":"narrow"},{"name":"inhibition of chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"negative regulation of CXCL2 production","type":"exact"},{"name":"negative regulation of MIP-2 production","type":"exact"},{"name":"negative regulation of MIP2 production","type":"exact"},{"name":"negative regulation of SCYB2 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000342"}


id: GO:0098509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect some level of humidity in its environment, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908","PMID:8650222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of humidity","synonyms":[{"name":"hygrosensory perception","type":"exact"}],"termid":"GO:0098509"}


id: PBO:0080003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 12","termid":"PBO:0080003"}


id: FYPO:0004942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains galactose and mannose residues in a normal (i.e. indistinguishable from wild type) ratio. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PMID:11015724","PomBase:mah","PMID:8782411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal galactose:mannose ratio in glycoprotein glycan","synonyms":[{"name":"normal galactose:mannose ratio in glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0004942"}


id: PBO:0078501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 3-1","termid":"PBO:0078501"}


id: GO:0019191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cellobiose from one side of a membrane to the other. Cellobiose, or 4-O-beta-D-glucopyranosyl-D-glucose, is a disaccharide that represents the basic repeating unit of cellulose.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"cellobiose transmembrane transporter activity","secondary_identifiers":["GO:0019190"],"synonyms":[{"name":"cellobiose permease activity","type":"exact"}],"termid":"GO:0019191"}


id: GO:0046041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"ITP metabolic process","synonyms":[{"name":"ITP metabolism","type":"exact"}],"termid":"GO:0046041"}


id: PR:P36605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol-phosphate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02885","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.02c","secondary_identifiers":["UniProtKB:P36605"],"synonyms":[{"name":"Spom972h-hisC","type":"exact"},{"name":"imidazole acetol-phosphate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36605"}


id: PBO:0087590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4","termid":"PBO:0087590"}


id: PBO:0040025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 1","termid":"PBO:0040025"}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: GO:0021572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:curators","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 development","termid":"GO:0021572"}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


id: GO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of insulin receptor signaling pathway","synonyms":[{"name":"regulation of insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0046626"}


id: PBO:0031346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_6-azauracil","termid":"PBO:0031346"}


id: PBO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 6 Y-linked","termid":"PBO:0061816"}


id: GO:1904602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serotonin-activated cation-selective channel activity. Mainly found in pre- and postsynaptic membranes of the brain and gastrointestinal tract. Depending on its location it transports Ca2+, Mg2+, Na+ or K+. It is always a pentamer, containing at least the 5HT3A subunit forming 5HT3A homopentamers or 5HT3A/B heteropentamers. In human, 5HT3A/C, A/D and A/E heteropentamers also exist.","definition_xrefs":["GOC:TermGenie","PMID:16116092","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"serotonin receptor complex","termid":"GO:0098665"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"serotonin-activated cation-selective channel complex","synonyms":[{"name":"5-HT-3 receptor complex","type":"exact"},{"name":"5-HT3 receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor 3 complex","type":"exact"},{"name":"5HT3 receptor complex","type":"exact"},{"name":"serotonin receptor complex","type":"broad"}],"termid":"GO:1904602"}


id: PBO:0049320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GS homeobox 2","termid":"PBO:0049320"}


id: PBO:0060279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 13","termid":"PBO:0060279"}


id: PBO:0027501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_FR901464","termid":"PBO:0027501"}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: PATO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperelliptic","termid":"PATO:0002322"}


id: PBO:0050827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYI antisense RNA 1","termid":"PBO:0050827"}


id: PBO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 5","termid":"PBO:0061284"}


id: PBO:0087784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Succinate semialdehyde dehydrogenase; involved in the utilization of gamma-aminobutyrate (GABA) as a nitrogen source; part of the 4-aminobutyrate and glutamate degradation pathways; localized to the cytoplasm","termid":"PBO:0087784"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["PMID:9139674","GOC:pz","PMID:1676842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["MetaCyc:RXN66-336","EC:2.3.2.2"],"termid":"GO:0103068"}


id: PBO:0065167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein C receptor","termid":"PBO:0065167"}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: GO:0052322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of phytoalexin biosynthetic process","termid":"GO:0052319"},{"relation_name":"is_a","term_name":"positive regulation of phytoalexin metabolic process","termid":"GO:0052320"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"positively_regulates","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phytoalexin biosynthetic process","synonyms":[{"name":"activation of phytoalexin biosynthesis","type":"narrow"},{"name":"positive regulation of phytoalexin biosynthesis","type":"exact"},{"name":"stimulation of phytoalexin biosynthesis","type":"narrow"},{"name":"up regulation of phytoalexin biosynthesis","type":"exact"},{"name":"up-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"upregulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052322"}


id: GO:0071182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071182"}


id: PBO:0074543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 divergent transcript","termid":"PBO:0074543"}


id: PBO:0066171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 4","termid":"PBO:0066171"}


id: GO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor production","termid":"GO:0090270"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor production","termid":"GO:0090271"}


id: GO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the volume of blood increases renal pressure and thereby results in both an increase in urine volume (diuresis) and an increase in the amount of sodium excreted in the urine (natriuresis).","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of blood volume","termid":"GO:0001977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pressure natriuresis","termid":"GO:0003095"}


id: GO:0035166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stages of blood cell formation that take place after completion of embryonic development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemopoiesis","termid":"GO:0030097"},{"relation_name":"part_of","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic hemopoiesis","synonyms":[{"name":"post-embryonic haemopoiesis","type":"exact"}],"termid":"GO:0035166"}


id: PBO:0071515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 18","termid":"PBO:0071515"}


id: PBO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 12, pseudogene","termid":"PBO:0048892"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: PBO:0041629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1B antisense RNA 1","termid":"PBO:0041629"}


id: PBO:0076700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCERG1 pseudogene 2","termid":"PBO:0076700"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0015216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, ubiquitin-protein ligase E3","termid":"PBO:0015216"}


id: RO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite-of relationship in which the host is a plant and the parasite that attaches to the host stem (PO:0009047)","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stem_parasite_of","termid":"RO:0002235"}


id: SO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The residue at an extremity of the sequence is not the terminal residue.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_terminal_residue","secondary_identifiers":["BS:00072"],"synonyms":[{"name":"non terminal","type":"exact"},{"name":"non_ter","type":"exact"}],"termid":"SO:0001084"}


id: GO:1990100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing homohexameric DNA helicase DnaB, and the DNA helicase loader DnaC. The helicase loader DnaC delivers DnaB to the chromosomal origin (oriC).","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"DnaB-DnaC complex","synonyms":[{"name":"DnaB6-DnaC3 complex","type":"narrow"},{"name":"DnaB6-DnaC6 complex","type":"narrow"},{"name":"helicase-loading complex","type":"broad"}],"termid":"GO:1990100"}


id: GO:0035025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rho protein signal transduction","synonyms":[{"name":"activation of Rho protein signal transduction","type":"narrow"},{"name":"stimulation of Rho protein signal transduction","type":"narrow"},{"name":"up regulation of Rho protein signal transduction","type":"exact"},{"name":"up-regulation of Rho protein signal transduction","type":"exact"},{"name":"upregulation of Rho protein signal transduction","type":"exact"}],"termid":"GO:0035025"}


id: PBO:0030822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trifluoperazine","termid":"PBO:0030822"}


id: PBO:0068463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 40, pseudogene","termid":"PBO:0068463"}


id: PATO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratified","termid":"PATO:0002068"}


id: GO:0044435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a plastid, a member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid part (obsolete GO:0044435)","termid":"GO:0044435"}


id: PBO:0034732
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin binding profiling","termid":"PBO:0034732"}


id: GO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a Cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate mRNA or circRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0008150"],"is_obsolete":false,"name":"cap-independent translational initiation","termid":"GO:0002190"}


id: PBO:0083885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferrochelatase; a mitochondrial inner membrane protein, catalyzes insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; human homolog FECH can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0083885"}


id: PR:P87041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.03","secondary_identifiers":["UniProtKB:P87041"],"synonyms":[{"name":"Golgi UDP-Gal transporter (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1795.03","type":"related"},{"name":"Spom972h-SLC35A3","type":"exact"}],"termid":"PR:P87041"}


id: FYPO:0004374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cytoplasm is abolished when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm during glucose starvation","synonyms":[{"name":"abolished protein localisation to cytoplasm during glucose starvation","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose depletion","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose deprivation","type":"exact"},{"name":"abolished protein localization to cytoplasm during glucose limitation","type":"related"},{"name":"protein localization to cytoplasm abolished during glucose starvation","type":"exact"}],"termid":"FYPO:0004374"}


id: PBO:0040880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 5","termid":"PBO:0040880"}


id: MOD:00958
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslink between Arg and His sidechains","termid":"MOD:00958"}


id: GO:0031805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 8 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 8 metabotropic glutamate receptor binding","synonyms":[{"name":"type 8 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031805"}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: PBO:0086253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that plays a role in modification of tRNA wobble nucleosides; protein plays role in tRNA wobble nucleoside modification with Elongator complex; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p","termid":"PBO:0086253"}


id: PBO:0110476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERRY endosomal RAB5 effector complex subunit 3","termid":"PBO:0110476"}


id: PR:Q9P7L3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.10c","synonyms":[{"name":"2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARIPP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAROPP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DARP reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC21C3.10c","type":"exact"}],"termid":"PR:Q9P7L3"}


id: GO:0044409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into the body, tissues, or cells of a host organism as part of the symbiont life cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host","secondary_identifiers":["GO:0085028","GO:0051806","GO:0044411","GO:0051828","GO:0030260","GO:0075052","GO:0085027","GO:0051830"],"synonyms":[{"name":"entry into cell of other organism during symbiotic interaction","type":"narrow"},{"name":"entry into cell of other organism involved in symbiotic interaction","type":"related"},{"name":"entry into host","type":"exact"},{"name":"entry into host cell via penetration peg","type":"narrow"},{"name":"entry into host through host barriers","type":"related"},{"name":"entry into host via a specialized structure during symbiotic interaction","type":"narrow"},{"name":"entry into host via enzymatic degradation of host anatomical structure","type":"narrow"},{"name":"entry into host via enzymatic degradation of host cuticle","type":"narrow"},{"name":"entry into other organism during symbiotic interaction","type":"related"},{"name":"entry into other organism involved in symbiotic interaction","type":"related"},{"name":"host invasion","type":"exact"},{"name":"host penetration","type":"exact"},{"name":"invasion into host","type":"exact"},{"name":"invasion into other organism","type":"related"},{"name":"invasion of host","type":"exact"},{"name":"invasion of other organism","type":"related"},{"name":"invasive growth","type":"related"},{"name":"other organism invasion","type":"related"},{"name":"penetration into host","type":"exact"},{"name":"penetration into host via a specialized structure","type":"narrow"},{"name":"penetration into host via a specialized structure during symbiotic interaction","type":"narrow"}],"termid":"GO:0044409"}


id: FYPO:0003032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to glucose starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during glucose starvation","synonyms":[{"name":"decreased RNA accumulation during glucose starvation","type":"related"},{"name":"decreased RNA level during cellular response to glucose starvation","type":"exact"},{"name":"decreased RNA level during glucose depletion","type":"exact"},{"name":"decreased RNA level during glucose deprivation","type":"exact"},{"name":"decreased RNA level during glucose limitation","type":"related"},{"name":"decreased transcript level during glucose starvation","type":"exact"},{"name":"reduced RNA level during glucose starvation","type":"exact"}],"termid":"FYPO:0003032"}


id: PBO:0090469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F","termid":"PBO:0090469"}


id: PATO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of the bearer's long term survival inability.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal (sensu genetics)","termid":"PATO:0000718"}


id: GO:0001664
data:
  {"annotated_genes":["SJAG_02444","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73261,79262],"is_not":false,"summary":null,"term":"GO:0001664"}]},"cv_name":"molecular_function","definition":"Binding to a G protein-coupled receptor.","definition_xrefs":["GOC:ceb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"G protein-coupled receptor binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-500717"],"synonyms":[{"name":"G protein coupled receptor binding","type":"exact"},{"name":"G protein coupled receptor ligand","type":"narrow"},{"name":"G-protein coupled receptor binding","type":"exact"},{"name":"G-protein-coupled receptor ligand","type":"narrow"}],"termid":"GO:0001664","terms_by_termid":{"GO:0001664":null}}


id: PBO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV assembly protein Cox20 (predicted)","termid":"PBO:0004428"}


id: PBO:0084572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein localized to the shmoo tip; required for cell fusion; expression regulated by mating pheromone; proposed to coordinate signaling, fusion, and polarization events required for fusion; potential Cdc28p substrate","termid":"PBO:0084572"}


id: PBO:0051718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 5","termid":"PBO:0051718"}


id: PBO:0039328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase pseudogene 1","termid":"PBO:0039328"}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: PBO:0075594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 1","termid":"PBO:0075594"}


id: GO:0010012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-campestanaol + O2 = 6-deoxocathasterone + H2O.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"steroid 22-alpha hydroxylase activity","termid":"GO:0010012"}


id: PBO:0040558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 1","termid":"PBO:0040558"}


id: PR:O13966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aconitate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.06c","secondary_identifiers":["UniProtKB:O13966"],"synonyms":[{"name":"Aconitase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACO2","type":"exact"},{"name":"citrate hydro-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13966"}


id: GO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}


id: GO:0000823
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94889],"is_not":false,"summary":null,"term":"GO:0000823"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,4,5-trisphosphate + 2 ATP = D-myo-inositol 1,4,5,6-tetrakisphosphate + 2 ADP + 2 H+.","definition_xrefs":["RHEA:32359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 6-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.151","KEGG_REACTION:R05800","MetaCyc:2.7.1.151-RXN"],"synonyms":[{"name":"IpmK","type":"broad"},{"name":"inositol polyphosphate multikinase activity","type":"broad"},{"name":"inositol trisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000823","terms_by_termid":{"GO:0000823":null}}


id: PBO:0074020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14","termid":"PBO:0074020"}


id: GO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the formation of carboxybiotin-carboxyl-carrier protein from biotin-carboxyl-carrier protein and carbon dioxide (CO2).","definition_xrefs":["EC:6.3.4.14"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin carboxylase complex (obsolete GO:0009343)","termid":"GO:0009343"}


id: PBO:0091957
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HEF3","termid":"PBO:0091957"}


id: GO:0033097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an amyloplast and form the amyloplast envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"amyloplast envelope","termid":"GO:0033096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"amyloplast membrane","termid":"GO:0033097"}


id: SO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: PATO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001080 relative work (obsolete PATO:0001080)","termid":"PATO:0001080"}


id: PBO:0066214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 7","termid":"PBO:0066214"}


id: GO:0010013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to N-1-naphthylphthalamic acid, an auxin transport inhibitor.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"N-1-naphthylphthalamic acid binding","termid":"GO:0010013"}


id: SO:0000754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The lambda bacteriophage is the vector for the linear lambda clone. The genes involved in the lysogenic pathway are removed from the from the viral DNA. Up to 25 kb of foreign DNA can then be inserted into the lambda genome.","definition_xrefs":["ISBN:0-1767-2380-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lambda_vector","synonyms":[{"name":"lambda vector","type":"exact"}],"termid":"SO:0000754"}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: GO:0046205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"nor-spermidine metabolic process","termid":"GO:0046204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine catabolic process","synonyms":[{"name":"nor-spermidine breakdown","type":"exact"},{"name":"nor-spermidine catabolism","type":"exact"},{"name":"nor-spermidine degradation","type":"exact"}],"termid":"GO:0046205"}


id: PBO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUVBL2 pseudogene 1","termid":"PBO:0072703"}


id: PBO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidised protein hydrolase (predicted)","termid":"PBO:0003933"}


id: GO:0150202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","PMID:29377008","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"negatively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"},{"relation_name":"part_of","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transport across blood-brain barrier","termid":"GO:0150202"}


id: PBO:0083712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in regulation of OLE1 transcription; inactive ER form dimerizes and one subunit is then activated by ubiquitin/proteasome-dependent processing followed by nuclear targeting; SPT23 has a paralog, MGA2, that arose from the whole genome duplication","termid":"PBO:0083712"}


id: SO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region related to restriction enzyme function.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_region","synonyms":[{"name":"restriction enzyme region","type":"related"}],"termid":"SO:0001954"}


id: PBO:0073642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 29, pseudogene","termid":"PBO:0073642"}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: GO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a renal interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast development","synonyms":[{"name":"kidney interstitial cell development","type":"exact"}],"termid":"GO:0072141"}


id: GO:0098517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which low humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of low humidity","termid":"GO:0098517"}


id: SO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VDJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VDJ_gene_segment","termid":"SO:0000574"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VDJ_J_cluster","synonyms":[{"name":"V VDJ J cluster","type":"exact"},{"name":"V-(VDJ)-J-CLUSTER","type":"related"}],"termid":"SO:0000522"}


id: GO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of canonical Wnt signaling pathway that positively regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart","PMID:16860783"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway (obsolete GO:0090082)","synonyms":[{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of heart induction by negative regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090082"}


id: PBO:0046025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit beta","termid":"PBO:0046025"}


id: GO:0102721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 an ubiquinol = 2 H2O + 2 an ubiquinone.","definition_xrefs":["GOC:pz","RHEA:30255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ubiquinol:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6883","EC:1.10.3.11"],"termid":"GO:0102721"}


id: PBO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase (predicted)","termid":"PBO:0011105"}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: PBO:0059993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 13","termid":"PBO:0059993"}


id: PBO:0048113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 1","termid":"PBO:0048113"}


id: PATO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of the bearer's growing old; aging.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescent","termid":"PATO:0001487"}


id: PBO:0066601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1","termid":"PBO:0066601"}


id: GO:0080154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:DHL","PMID:20478994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fertilization","termid":"GO:0080154"}


id: GO:0018622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorophenylacetate + NADH + O2 = 3,4-dihydroxyphenylacetate + chloride + NAD+.","definition_xrefs":["EC:1.14.12.9","RHEA:14689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-chlorophenylacetate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.12.9-RXN","UM-BBD_reactionID:r0308","KEGG_REACTION:R03306"],"synonyms":[{"name":"4-chlorophenylacetate,NADH:oxygen oxidoreductase (3,4-hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018622"}


id: GO:0160112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule.","definition_xrefs":["GOC:krc","PMID:37295417","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal B tubule inner sheath","termid":"GO:0160112"}


id: PR:O13984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication-associated recombination protein A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01708","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase WRNIP1 homolog C26H5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.02c","secondary_identifiers":["UniProtKB:O13984"],"synonyms":[{"name":"Spom972h-rarA","type":"exact"}],"termid":"PR:O13984"}


id: PBO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxidoreductase_activity","termid":"PBO:0031530"}


id: PBO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase (predicted)","termid":"PBO:0003033"}


id: PBO:0068464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 41, pseudogene","termid":"PBO:0068464"}


id: GO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + NAD(P)+ = succinyl-CoA + CO2 + NAD(P)H.","definition_xrefs":["EC:1.2.1.52","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxoglutarate dehydrogenase [NAD(P)+] activity","termid":"GO:0034601"}


id: PBO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc82 (predicted)","termid":"PBO:0001981"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: PR:P87234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp3 gene.","definition_xrefs":["UniProtKB:P87234","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.09c","synonyms":[{"name":"Spom972h-gyp3","type":"exact"}],"termid":"PR:P87234"}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"part_of","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: GO:0033081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation in thymus","synonyms":[{"name":"regulation of T cell development in thymus","type":"related"},{"name":"regulation of thymic T cell differentiation","type":"exact"},{"name":"regulation of thymocyte cell differentiation","type":"exact"},{"name":"regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033081"}


id: PBO:0063964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIP5K1A and PSMD4 like (pseudogene)","termid":"PBO:0063964"}


id: FYPO:0007894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is increased at subtelomeric heterochromatin. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:34731638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein ubiquitination during vegetative growth","termid":"FYPO:0002082"},{"relation_name":"is_a","term_name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0005607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2B-K119 ubiquitination at subtelomeric heterochromatin","termid":"FYPO:0007894"}


id: PBO:0028277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028277"}


id: PBO:0041728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II gamma","termid":"PBO:0041728"}


id: PBO:0083738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; required for efficient Golgi-to-ER trafficking in COPI mutants","termid":"PBO:0083738"}


id: FYPO_EXT:1000002
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"FYPO extension ontology grouping term for relations relevant to penetrance","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO extension","termid":"FYPO_EXT:1000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}


id: PBO:0064907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 catalytic subunit","termid":"PBO:0064907"}


id: PBO:0078439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 5-1","termid":"PBO:0078439"}


id: PBO:0049564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.N variant histone 1","termid":"PBO:0049564"}


id: PBO:0080609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B","termid":"PBO:0080609"}


id: FYECO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a microtubule depolymerizing drug was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ microtubule depolymerizing drugs","synonyms":[{"name":"+ MBC","type":"narrow"}],"termid":"FYECO:0000235"}


id: PBO:0088268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1","termid":"PBO:0088268"}


id: PBO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-B (predicted)","termid":"PBO:0005310"}


id: PBO:0053719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 929","termid":"PBO:0053719"}


id: PBO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor (predicted)","termid":"PBO:0024479"}


id: FYPO:0004622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0000054","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: GO:0150054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic neurotransmitter receptor diffusion trapping.","definition_xrefs":["PMID:20935643","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"regulates","term_name":"postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0098970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic neurotransmitter receptor diffusion trapping","termid":"GO:0150054"}


id: PBO:0053828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1093","termid":"PBO:0053828"}


id: GO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine oxidase activity","secondary_identifiers":["MetaCyc:RXN-8674","MetaCyc:RXN-8672","MetaCyc:RXN-8673","MetaCyc:1.4.3.19-RXN"],"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0028344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0028344"}


id: PBO:0062278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 14","termid":"PBO:0062278"}


id: PATO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001082 damage value (obsolete PATO:0001082)","termid":"PATO:0001082"}


id: PBO:0049116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 180","termid":"PBO:0049116"}


id: PBO:0034765
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene product was previously annotated to respiratory chain NADH dehydrogenase complex. This annotation was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034765"}


id: PBO:0004041
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.5","termid":"PBO:0004041"}


id: GO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response against an antigen not previously encountered by immune system.","definition_xrefs":["PMID:26831526","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary adaptive immune response","termid":"GO:0090720"}


id: GO:0034777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a recycling endosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005768","GO:0031410"],"is_obsolete":false,"name":"recycling endosome lumen","termid":"GO:0034777"}


id: PBO:0065955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component like 1","termid":"PBO:0065955"}


id: FYPO:0007054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to zinc ion starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to zinc ion starvation","synonyms":[{"name":"normal protein accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"normal protein level during cellular response to zinc ion depletion","type":"exact"},{"name":"normal protein level during cellular response to zinc ion deprivation","type":"exact"},{"name":"normal protein level during cellular response to zinc ion limitation","type":"exact"},{"name":"normal protein level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to zinc starvation","type":"exact"}],"termid":"FYPO:0007054"}


id: GO:0010916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle clearance. Very-low-density lipoprotein particle clearance is the process in which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein particle clearance","termid":"GO:0010985"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle clearance","synonyms":[{"name":"negative regulation of VLDL clearance","type":"exact"},{"name":"negative regulation of VLDL particle clearance","type":"exact"}],"termid":"GO:0010916"}


id: SO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a methionine anticodon, and a 3' methionine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"methionine_tRNA_primary_transcript","termid":"SO:0000223"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl_tRNA","synonyms":[{"name":"methionyl tRNA","type":"exact"},{"name":"methionyl-transfer RNA","type":"exact"},{"name":"methionyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000266"}


id: GO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A germline specific spherical organelle, rich in membrane skeletal proteins. Precursor to the fusome.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spectrosome","termid":"GO:0045170"}


id: GO:0072371
data:
  {"annotated_genes":["SJAG_03720","SJAG_00364","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102687,110554,112290],"is_not":false,"summary":null,"term":"GO:0072371"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-serine (position 121) + ATP = histone H2A-phosphoserine (position 121) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 121 of histone H2A.","definition_xrefs":["GOC:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0140096","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"histone H2AS121 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A-S121 kinase activity","type":"exact"},{"name":"histone kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone serine kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2A-S121 specific)","type":"exact"}],"termid":"GO:0072371","terms_by_termid":{"GO:0072371":null}}


id: PBO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 1","termid":"PBO:0047735"}


id: GO:1901435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toluene catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of toluene catabolic process","termid":"GO:1901434"},{"relation_name":"is_a","term_name":"negative regulation of toluene metabolic process","termid":"GO:1901438"},{"relation_name":"negatively_regulates","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toluene catabolic process","synonyms":[{"name":"down regulation of toluene breakdown","type":"exact"},{"name":"down regulation of toluene catabolic process","type":"exact"},{"name":"down regulation of toluene catabolism","type":"exact"},{"name":"down regulation of toluene degradation","type":"exact"},{"name":"down-regulation of toluene breakdown","type":"exact"},{"name":"down-regulation of toluene catabolic process","type":"exact"},{"name":"down-regulation of toluene catabolism","type":"exact"},{"name":"down-regulation of toluene degradation","type":"exact"},{"name":"downregulation of toluene breakdown","type":"exact"},{"name":"downregulation of toluene catabolic process","type":"exact"},{"name":"downregulation of toluene catabolism","type":"exact"},{"name":"downregulation of toluene degradation","type":"exact"},{"name":"inhibition of toluene breakdown","type":"exact"},{"name":"inhibition of toluene catabolic process","type":"narrow"},{"name":"inhibition of toluene catabolism","type":"exact"},{"name":"inhibition of toluene degradation","type":"exact"},{"name":"negative regulation of toluene breakdown","type":"exact"},{"name":"negative regulation of toluene catabolism","type":"exact"},{"name":"negative regulation of toluene degradation","type":"exact"}],"termid":"GO:1901435"}


id: PBO:0038929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L3","termid":"PBO:0038929"}


id: GO:0010624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell proliferation","termid":"GO:0060251"},{"relation_name":"regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation","termid":"GO:0010624"}


id: PBO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein inhibiting regulator of actin dynamics","termid":"PBO:0043854"}


id: PBO:0055040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2455","termid":"PBO:0055040"}


id: PBO:0027299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_arrest_phenotype","termid":"PBO:0027299"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["PMID:20018852","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: SO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_unprocessed_pseudogene","synonyms":[{"name":"translated unprocessed pseudogene","type":"exact"},{"name":"translated_nonprocessed_pseudogene","type":"exact"}],"termid":"SO:0002106"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: PBO:0058445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5010","termid":"PBO:0058445"}


id: PATO:0002177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A deviation quality inhering in a bearer by virtue of the bearer's changed direction of position towards the middle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deviation","termid":"PATO:0002175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation towards the medial side","termid":"PATO:0002177"}


id: GO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of a potassium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of ion channel activity in another organism","termid":"GO:0044561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of potassium channel activity in another organism","synonyms":[{"name":"modulation of potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044363"}


id: GO:0035967
data:
  {"annotated_genes":["SJAG_04262","SJAG_00530","SJAG_00270","SJAG_00790","SJAG_02419","SJAG_04435","SJAG_04612","SJAG_00552","SJAG_02341","SJAG_01516","SJAG_05022","SJAG_02601","SJAG_00226","SJAG_00219","SJAG_03611","SJAG_01160","SJAG_04103","SJAG_00403","SJAG_00054","SJAG_01768","SJAG_04187","SJAG_03841","SJAG_04283","SJAG_00681","SJAG_00173","SJAG_04567","SJAG_04118","SJAG_03657","SJAG_03815","SJAG_00564","SJAG_01737","SJAG_01556","SJAG_04471","SJAG_03482","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106069,101265,108348,100285,84236,106070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[99008,106072,106071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[105710,104070,109684,106396,105811],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[103239,94802,89042,97312,113409,113255,90596,109873,110265,110133,112823,112078,105634,85798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[85398,83959,109044,99490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[89189,85647],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[86546,106918],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"},{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00226":null,"SJAG_00270":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00552":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01160":null,"SJAG_01516":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01768":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02601":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04187":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to topologically incorrect protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to misfolded or unfolded protein","type":"related"}],"termid":"GO:0035967","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null,"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0068860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 100, pseudogene","termid":"PBO:0068860"}


id: GO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell differentiation process that results in commitment of a cell to become part of the mesoderm.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"},{"relation_name":"part_of","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate commitment","synonyms":[{"name":"mesoderm cell fate commitment","type":"exact"}],"termid":"GO:0001710"}


id: GO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O2 + H+ + palmitate = CO2 + 3 H2O + pentadecanal.","definition_xrefs":["EC:1.11.1.3","RHEA:23960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fatty acid peroxidase activity","secondary_identifiers":["MetaCyc:FATTY-ACID-PEROXIDASE-RXN","KEGG_REACTION:R01703"],"synonyms":[{"name":"fatty-acid peroxidase activity","type":"exact"},{"name":"hexadecanoate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"long chain fatty acid peroxidase activity","type":"related"}],"termid":"GO:0047888"}


id: PBO:0048284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 18","termid":"PBO:0048284"}


id: PBO:0005846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, unknown biological role","termid":"PBO:0005846"}


id: GO:0098511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["PMID:18269908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of humidity","termid":"GO:0098509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of low humidity","termid":"GO:0098511"}


id: GO:0033152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin heavy chains V, D, and J gene segments are joined, and for immunoglobulin light chains V and J gene segments are joined.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin V(D)J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"exact"},{"name":"immunoglobulin V-D-J joining","type":"narrow"},{"name":"immunoglobulin V-D-J recombination","type":"narrow"},{"name":"immunoglobulin V-J joining","type":"narrow"},{"name":"immunoglobulin V-J recombination","type":"narrow"}],"termid":"GO:0033152"}


id: PBO:0091206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu","termid":"PBO:0091206"}


id: PBO:0057383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ay","termid":"PBO:0057383"}


id: PBO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase B","termid":"PBO:0040501"}


id: GO:0097010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.","definition_xrefs":["GOC:BHF","PMID:18337562","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"eIF-4F assembly","type":"exact"},{"name":"eIF4F assembly","type":"exact"}],"termid":"GO:0097010"}


id: GO:1990407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin gene-related peptide (CGRP).","definition_xrefs":["GOC:bhm","PMID:10882736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin gene-related peptide binding","synonyms":[{"name":"CGRP polypeptide binding","type":"exact"},{"name":"calcitonin-gene-related peptide binding","type":"exact"},{"name":"calcitonin-gene-related polypeptide binding","type":"exact"}],"termid":"GO:1990407"}


id: GO:0102482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-deoxy-D-glucuronate = 5-dehydro-2-deoxy-D-gluconate.","definition_xrefs":["RHEA:25840","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-deoxy-D-glucuronate isomerase activity","secondary_identifiers":["EC:5.3.1.30","MetaCyc:RXN-14150"],"termid":"GO:0102482"}


id: GO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein ubiquitination","synonyms":[{"name":"activation of protein ubiquitination","type":"narrow"},{"name":"stimulation of protein ubiquitination","type":"narrow"},{"name":"up regulation of protein ubiquitination","type":"exact"},{"name":"up-regulation of protein ubiquitination","type":"exact"},{"name":"upregulation of protein ubiquitination","type":"exact"}],"termid":"GO:0031398"}


id: GO:1902526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein monoubiquitination","termid":"GO:1902525"},{"relation_name":"negatively_regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein monoubiquitination","synonyms":[{"name":"down regulation of protein monoubiquitination","type":"exact"},{"name":"down regulation of protein monoubiquitinylation","type":"exact"},{"name":"down regulation of protein monoubiquitylation","type":"exact"},{"name":"down-regulation of protein monoubiquitination","type":"exact"},{"name":"down-regulation of protein monoubiquitinylation","type":"exact"},{"name":"down-regulation of protein monoubiquitylation","type":"exact"},{"name":"downregulation of protein monoubiquitination","type":"exact"},{"name":"downregulation of protein monoubiquitinylation","type":"exact"},{"name":"downregulation of protein monoubiquitylation","type":"exact"},{"name":"inhibition of protein monoubiquitination","type":"narrow"},{"name":"inhibition of protein monoubiquitinylation","type":"narrow"},{"name":"inhibition of protein monoubiquitylation","type":"narrow"},{"name":"negative regulation of protein monoubiquitinylation","type":"exact"},{"name":"negative regulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902526"}


id: SO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript feature that has been predicted but is not yet validated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted_transcript","synonyms":[{"name":"predicted transcript","type":"exact"}],"termid":"SO:0002138"}


id: GO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in cell wall organization or biogenesis (obsolete GO:0000201)","synonyms":[{"name":"MAPK import into nucleus involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK import into nucleus involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, MAPK import into nucleus","type":"exact"},{"name":"cell wall biogenesis, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall biogenesis","type":"narrow"},{"name":"nuclear translocation of MAPK involved in cell wall integrity","type":"narrow"}],"termid":"GO:0000201"}


id: PBO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae COQ8","termid":"PBO:0004301"}


id: SO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SSLP are a kind of sequence alteration where the number of repeated sequences in intergenic regions may differ.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_sequence_length_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Simple_sequence_length_polymorphism"],"synonyms":[{"name":"SSLP","type":"related"},{"name":"simple sequence length polymorphism","type":"related"},{"name":"simple sequence length variation","type":"exact"}],"termid":"SO:0000207"}


id: PATO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having many fine filaments or branches that give a feathery appearance: for example, resembling a feather.","definition_xrefs":["www.oxforddictionaries.com:http://www.oxforddictionaries.com/us/definition/american_english/plumose"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plumose","termid":"PATO:0005010"}


id: PBO:0090161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I,II and III complex subunit Trs20","termid":"PBO:0090161"}


id: FYPO:0007982
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which all detectable microtubules are present in a single bundle and are not normally crosslinked, resulting in an aster-like organisation. See PMID:15068790.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single microtubule bundle during mitotic interphase","termid":"FYPO:0002400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"single microtubule bundle with aster-like microtubules","termid":"FYPO:0007982"}


id: PBO:0005342
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.33","termid":"PBO:0005342"}


id: PR:Q9P7J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- xlf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xrcc4-like factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.14c","synonyms":[{"name":"Spom972h-xlf1","type":"exact"},{"name":"meiotically up-regulated gene 104 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"non-homologous end-joining protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7J2"}


id: PBO:0039882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 42","termid":"PBO:0039882"}


id: GO:0044612
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99076],"is_not":false,"summary":null,"term":"GO:0044612"}]},"cv_name":"cellular_component","definition":"A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p).","definition_xrefs":["PMID:18046406","PMID:19524430","PMID:22419078","GOC:dgf","PMID:20947011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991","GO:0005643"],"is_obsolete":false,"name":"nuclear pore linkers","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nic96 complex","type":"related"},{"name":"Nup82 complex","type":"related"}],"termid":"GO:0044612","terms_by_termid":{"GO:0044612":null}}


id: PBO:0053888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1168","termid":"PBO:0053888"}


id: PBO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5","termid":"PBO:0090552"}


id: PBO:0079634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 5, Y-linked","termid":"PBO:0079634"}


id: GO:0006267
data:
  {"annotated_genes":["SJAG_02607","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99401,106626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the nuclear pre-replicative complex, a protein-DNA complex that forms at the eukaryotic DNA replication origin and is required for replication initiation.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0044085","GO:0006260","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly","type":"exact"},{"name":"pre-RC complex assembly","type":"broad"},{"name":"pre-replicative complex assembly","type":"broad"},{"name":"pre-replicative complex formation","type":"broad"}],"termid":"GO:0006267","terms_by_termid":{"GO:1902985":null}}


id: PBO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated by different signals","termid":"PBO:0011089"}


id: PBO:0067176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 233, pseudogene","termid":"PBO:0067176"}


id: GO:1902287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in axon guidance.","definition_xrefs":["PMID:22790009","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in axon guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in axon chemotaxis","type":"related"},{"name":"semaphorin-plexin signaling pathway involved in axon growth cone guidance","type":"narrow"},{"name":"semaphorin-plexin signaling pathway involved in axon pathfinding","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in axon chemotaxis","type":"related"},{"name":"semaphorin-plexin signalling pathway involved in axon growth cone guidance","type":"narrow"},{"name":"semaphorin-plexin signalling pathway involved in axon guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:1902287"}


id: GO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"peripheral nervous system development","termid":"GO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}


id: PBO:0065155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5 pseudogene 1","termid":"PBO:0065155"}


id: PBO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_during_vegetative_growth","termid":"PBO:0036111"}


id: GO:1903713
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106087,98880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"}]},"cv_name":"biological_process","definition":"The directed movement of asparagine across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:18503766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"asparagine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903713","terms_by_termid":{"GO:1990591":null}}


id: PBO:0045650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 8","termid":"PBO:0045650"}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: PBO:0039063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGK divergent transcript","termid":"PBO:0039063"}


id: PBO:0061619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4B","termid":"PBO:0061619"}


id: PBO:0005772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin family glycoprotien receptor (predicted)","termid":"PBO:0005772"}


id: PBO:0066362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 regulator of GUCY2D","termid":"PBO:0066362"}


id: GO:0070175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tooth mineralization","termid":"GO:0070172"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"positively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of enamel mineralization","termid":"GO:0070175"}


id: GO:0032090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Pyrin domain binding","synonyms":[{"name":"DAPIN domain binding","type":"exact"},{"name":"PAAD domain binding","type":"exact"}],"termid":"GO:0032090"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["UniProtKB:Q9USM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: PR:O14235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof5 gene.","definition_xrefs":["UniProtKB:O14235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pof5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.02c","synonyms":[{"name":"Spom972h-pof5","type":"exact"}],"termid":"PR:O14235"}


id: PBO:0004255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0004255"}


id: GO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009198"}


id: GO:0008042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An iron-sulfur protein that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete iron-sulfur electron transfer carrier (obsolete GO:0008042)","synonyms":[{"name":"ferredoxin","type":"narrow"},{"name":"iron-sulfur electron transfer carrier","type":"exact"},{"name":"iron-sulphur electron transfer carrier","type":"exact"}],"termid":"GO:0008042"}


id: GO:0140026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissociation of the contractile vacuole after discharge, from the plasma membrane. This interaction is mediated by detethering factors that initiate the process of tubulation and fragmentation of the empty contractile vacuole bladder, which is then reincorporated into the CV network.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole dissociation from plasma membrane","synonyms":[{"name":"contractile vacuole detethering from plasma membrane","type":"exact"}],"termid":"GO:0140026"}


id: PBO:0086120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; also plays a role in the cell cycle and the DNA damage response; contains HEAT-repeats","termid":"PBO:0086120"}


id: PR:Q9C1X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP32A8.02 gene.","definition_xrefs":["UniProtKB:Q9C1X5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase P32A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.02","synonyms":[{"name":"Spom972h-SPAP32A8.02","type":"exact"}],"termid":"PR:Q9C1X5"}


id: PBO:0066363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 like","termid":"PBO:0066363"}


id: PBO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 3","termid":"PBO:0046366"}


id: PBO:0041796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZB pseudogene 1","termid":"PBO:0041796"}


id: GO:0102423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-sesaminol + UDP-alpha-D-glucose = (+)-sesaminol 2-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["PMID:18248594","PMID:19561332","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-sesaminol 2-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13818"],"termid":"GO:0102423"}


id: PBO:0054225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1607","termid":"PBO:0054225"}


id: PBO:0027083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_adenine_starvation","termid":"PBO:0027083"}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90531,94033,96272],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ab","PMID:16452632","RHEA:38583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: PBO:0013132
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPHerical shape","termid":"PBO:0013132"}


id: PBO:0079661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 9","termid":"PBO:0079661"}


id: GO:1900092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of raffinose biosynthetic process","termid":"GO:1900091"},{"relation_name":"negatively_regulates","term_name":"raffinose biosynthetic process","termid":"GO:0033529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of raffinose biosynthetic process","synonyms":[{"name":"down regulation of raffinose anabolism","type":"exact"},{"name":"down regulation of raffinose biosynthesis","type":"exact"},{"name":"down regulation of raffinose biosynthetic process","type":"exact"},{"name":"down regulation of raffinose formation","type":"exact"},{"name":"down regulation of raffinose synthesis","type":"exact"},{"name":"down-regulation of raffinose anabolism","type":"exact"},{"name":"down-regulation of raffinose biosynthesis","type":"exact"},{"name":"down-regulation of raffinose biosynthetic process","type":"exact"},{"name":"down-regulation of raffinose formation","type":"exact"},{"name":"down-regulation of raffinose synthesis","type":"exact"},{"name":"downregulation of raffinose anabolism","type":"exact"},{"name":"downregulation of raffinose biosynthesis","type":"exact"},{"name":"downregulation of raffinose biosynthetic process","type":"exact"},{"name":"downregulation of raffinose formation","type":"exact"},{"name":"downregulation of raffinose synthesis","type":"exact"},{"name":"inhibition of raffinose anabolism","type":"exact"},{"name":"inhibition of raffinose biosynthesis","type":"exact"},{"name":"inhibition of raffinose biosynthetic process","type":"narrow"},{"name":"inhibition of raffinose formation","type":"exact"},{"name":"inhibition of raffinose synthesis","type":"exact"},{"name":"negative regulation of raffinose anabolism","type":"exact"},{"name":"negative regulation of raffinose biosynthesis","type":"exact"},{"name":"negative regulation of raffinose formation","type":"exact"},{"name":"negative regulation of raffinose synthesis","type":"exact"}],"termid":"GO:1900092"}


id: GO:1900638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of asperfuranone biosynthetic process","synonyms":[{"name":"down regulation of asperfuranone anabolism","type":"exact"},{"name":"down regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down regulation of asperfuranone formation","type":"exact"},{"name":"down regulation of asperfuranone synthesis","type":"exact"},{"name":"down-regulation of asperfuranone anabolism","type":"exact"},{"name":"down-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down-regulation of asperfuranone formation","type":"exact"},{"name":"down-regulation of asperfuranone synthesis","type":"exact"},{"name":"downregulation of asperfuranone anabolism","type":"exact"},{"name":"downregulation of asperfuranone biosynthesis","type":"exact"},{"name":"downregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"downregulation of asperfuranone formation","type":"exact"},{"name":"downregulation of asperfuranone synthesis","type":"exact"},{"name":"inhibition of asperfuranone anabolism","type":"exact"},{"name":"inhibition of asperfuranone biosynthesis","type":"exact"},{"name":"inhibition of asperfuranone biosynthetic process","type":"narrow"},{"name":"inhibition of asperfuranone formation","type":"exact"},{"name":"inhibition of asperfuranone synthesis","type":"exact"},{"name":"negative regulation of asperfuranone anabolism","type":"exact"},{"name":"negative regulation of asperfuranone biosynthesis","type":"exact"},{"name":"negative regulation of asperfuranone formation","type":"exact"},{"name":"negative regulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900638"}


id: GO:1901658
data:
  {"annotated_genes":["SJAG_01359","SJAG_03771","SJAG_02959","SJAG_00957","SJAG_02580","SJAG_04927","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83743,83742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[85335,104440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[86780,108232,87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound breakdown","type":"exact"},{"name":"glycosyl compound catabolism","type":"exact"},{"name":"glycosyl compound degradation","type":"exact"}],"termid":"GO:1901658","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0009972":null,"GO:0046135":null}}


id: PR:Q9USK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set9 gene.","definition_xrefs":["UniProtKB:Q9USK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase set9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.12","synonyms":[{"name":"SET domain protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set9","type":"exact"},{"name":"lysine N-methyltransferase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USK2"}


id: PBO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_hydroxyurea","termid":"PBO:0032698"}


id: GO:1904880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen sulfide stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:24012591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrogen sulfide","synonyms":[{"name":"response to dihydridosulfur","type":"exact"},{"name":"response to sulfane","type":"exact"}],"termid":"GO:1904880"}


id: PATO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elevation relative to","termid":"PATO:0002515"}


id: GO:0102924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + gibberellin A44 + 2-oxoglutarate + O2 = gibberellin A98 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin A44,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-886"],"termid":"GO:0102924"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87313],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: PBO:0013471
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiaie ortholog","termid":"PBO:0013471"}


id: PBO:0071676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 8","termid":"PBO:0071676"}


id: PBO:0073523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3BP5 antisense RNA 1","termid":"PBO:0073523"}


id: PBO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyltransferase Cid1","termid":"PBO:0031894"}


id: GO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005829","GO:0032991"],"is_obsolete":false,"name":"cytosol pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045249"}


id: GO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"chloride channel regulator activity","secondary_identifiers":["Reactome:R-HSA-383190"],"termid":"GO:0017081"}


id: PBO:0089022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Tpz1","termid":"PBO:0089022"}


id: PBO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug100","termid":"PBO:0017009"}


id: _global:symbiotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"_global:participates_in_a_biotic-biotic_interaction_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","secondary_identifiers":["RO:0002440"],"termid":"_global:symbiotically_interacts_with"}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: PR:G2TRQ3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C16E9.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.20","synonyms":[{"name":"Spom972h-SPBC16E9.20","type":"exact"}],"termid":"PR:G2TRQ3"}


id: PBO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine/uridine monophosphate kinase 1","termid":"PBO:0043401"}


id: PBO:0057401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-3","termid":"PBO:0057401"}


id: PBO:0085739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p","termid":"PBO:0085739"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23359:SF23","PRO:DNx","OMA:SCHPO04532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: PBO:0064654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRF interacting protein alpha 4","termid":"PBO:0064654"}


id: GO:0005774
data:
  {"annotated_genes":["SJAG_01571","SJAG_03656","SJAG_04471","SJAG_02023","SJAG_04698","SJAG_03371","SJAG_03072","SJAG_00209","SJAG_01817","SJAG_03009","SJAG_00516","SJAG_04963","SJAG_00877","SJAG_01471","SJAG_01505","SJAG_03725","SJAG_02356","SJAG_01299","SJAG_01320","SJAG_02853","SJAG_01112","SJAG_00824","SJAG_01983","SJAG_02699","SJAG_03450","SJAG_03400","SJAG_01619","SJAG_04023","SJAG_01236","SJAG_01509","SJAG_02424","SJAG_04502","SJAG_03406","SJAG_02723","SJAG_01795","SJAG_00638","SJAG_00051","SJAG_00534","SJAG_02414","SJAG_06309","SJAG_01324","SJAG_07012","SJAG_02289","SJAG_02103","SJAG_05210","SJAG_01080","SJAG_04910","SJAG_02344","SJAG_01990","SJAG_00561","SJAG_04966","SJAG_03403","SJAG_03250","SJAG_02656","SJAG_02029","SJAG_03138","SJAG_01344","SJAG_04506","SJAG_05294","SJAG_00688","SJAG_04725","SJAG_03909","SJAG_03005","SJAG_04232","SJAG_02902","SJAG_03447","SJAG_00380","SJAG_03511","SJAG_03089","SJAG_01184","SJAG_03895","SJAG_01598","SJAG_02716","SJAG_04028","SJAG_03401","SJAG_03355","SJAG_00771","SJAG_01027","SJAG_01032","SJAG_03667","SJAG_02765","SJAG_01783","SJAG_00299","SJAG_01913","SJAG_01991","SJAG_00732","SJAG_01078","SJAG_02565","SJAG_01397","SJAG_04496","SJAG_03960","SJAG_02315","SJAG_05194","SJAG_03497","SJAG_01145","SJAG_03100","SJAG_02603","SJAG_03256","SJAG_04643","SJAG_02231","SJAG_03442","SJAG_00204","SJAG_01803","SJAG_05184","SJAG_01447","SJAG_00570","SJAG_03928","SJAG_00457","SJAG_03848","SJAG_02117","SJAG_00136","SJAG_03137","SJAG_01319","SJAG_03313","SJAG_03987","SJAG_02665","SJAG_04867","SJAG_01941","SJAG_01036","SJAG_00029","SJAG_04955","SJAG_00821","SJAG_04975","SJAG_02782","SJAG_04616","SJAG_00212","SJAG_04015","SJAG_01772","SJAG_02578","SJAG_03899","SJAG_01400","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84180,84471,85555,90272,92200,94105,94422,95650,97521,99090,101751,102709,103210,103463,105868,106327,107016],"is_not":false,"summary":null,"term":"GO:0005774"},{"annotations":[109701,86208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000421"},{"annotations":[94693,94787,99664,105491,85976,106455,109616,98048,110563,112668,90161,112935,114731,91758,91869,93151,94648,89993,90413,113059,97518,113828,104341,100952,99874,103354,102734,85229,94948,113280,103914,85274,108623,88217,89811,90693,86290,113625,85288,114205,96087,99985,90133,98879,112595,99513,90692,86523,84194,86348,88987,83890,93717,94451,85449,102740,101182,106086,110386,107845,103255,106412,87600,105441,99910,92793,89868,92129,96325,101764,103461,92509,104742,105324,105934,106320,85208,90724,105353,106052,91998,94143,85242,88154,89068,106325,109294,109475,109705,101023,84176,96049,110393,110923,111602,112247,113407,113565,114367,92709,92085,96302,96355,92237,93459,94909,89629,96011,89869,97704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000329"},{"annotations":[106053,109618,83891,103355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070772"},{"annotations":[90162,103915,101184,88988],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071986"},{"annotations":[114437,97193,96386,96326,100695,85849,90415,86309],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902500"},{"annotations":[88155,99986,96012,91759,86291,85977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[97713,114732,92710,95000,96088,105936,84195,98745],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":132,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00051":null,"SJAG_00136":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00561":null,"SJAG_00570":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01036":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01184":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01505":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01598":null,"SJAG_01619":null,"SJAG_01772":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02103":null,"SJAG_02117":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02424":null,"SJAG_02433":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_03005":null,"SJAG_03009":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03403":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03511":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03960":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04028":null,"SJAG_04232":null,"SJAG_04471":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05294":null,"SJAG_06309":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"vacuolar membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005774","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000329":null,"GO:0000421":null,"GO:0005774":null,"GO:0070772":null,"GO:0071986":null,"GO:1902500":null}}


id: FYPO:0002541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to nucleoplasm","synonyms":[{"name":"increased protein localisation to nucleoplasm","type":"exact"},{"name":"increased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002541"}


id: FYPO:0007660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at an abnormal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon each division.","definition_xrefs":["PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at abnormal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at abnormal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by unequal cell division","type":"exact"},{"name":"variable cell size at division with abnormal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with loss of cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at abnormal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at abnormal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at abnormal size","type":"exact"}],"termid":"FYPO:0007660"}


id: PBO:0077952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 10-1","termid":"PBO:0077952"}


id: PR:O13892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc1 gene.","definition_xrefs":["UniProtKB:O13892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.08","synonyms":[{"name":"Spom972h-pdc1","type":"exact"}],"termid":"PR:O13892"}


id: GO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplastic endopeptidase Clp complex","termid":"GO:0009840"}


id: GO:0071346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type II interferon","termid":"GO:0034341"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type II interferon","synonyms":[{"name":"cellular response to gamma-interferon","type":"related"},{"name":"cellular response to immune interferon","type":"exact"},{"name":"cellular response to interferon-gamma","type":"broad"},{"name":"cellular response to type II IFN","type":"broad"}],"termid":"GO:0071346"}


id: PBO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structures of acceptor stem and anticodon/intron loop of substrate tRNA crucial for RNaseP activity","termid":"PBO:0017075"}


id: PBO:0060864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 7","termid":"PBO:0060864"}


id: PBO:0091605
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 sequence errors 5368262TC->T 5368273 and G->GT would change amino acids PPIYGL to PPYTVL","termid":"PBO:0091605"}


id: GO:1900866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycolate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glycolate transport","termid":"GO:1900866"}


id: PBO:0049854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECTD2 antisense RNA 1","termid":"PBO:0049854"}


id: GO:0019977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-21.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-21 binding","synonyms":[{"name":"IL-21 binding","type":"exact"}],"termid":"GO:0019977"}


id: GO:0006038
data:
  {"annotated_genes":["SJAG_04868","SJAG_00978","SJAG_00442","SJAG_04728","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100722],"is_not":false,"summary":null,"term":"GO:0006038"},{"annotations":[84858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[84689,84351,98865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin biosynthetic process","termid":"GO:0006031"},{"relation_name":"is_a","term_name":"cell wall chitin metabolic process","termid":"GO:0006037"},{"relation_name":"part_of","term_name":"cell wall biogenesis","termid":"GO:0042546"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00978":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cell wall chitin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall chitin anabolism","type":"exact"},{"name":"cell wall chitin biosynthesis","type":"exact"},{"name":"cell wall chitin formation","type":"exact"},{"name":"cell wall chitin synthesis","type":"exact"}],"termid":"GO:0006038","terms_by_termid":{"GO:0006038":null,"GO:0034217":null,"GO:0034221":null}}


id: GO:0032240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nucleobase-containing compound transport","synonyms":[{"name":"down regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"downregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"inhibition of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"narrow"},{"name":"negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032240"}


id: PBO:0085182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1 kinase complex; allows nuclear localization of the Snf1 kinase complex in the presence of a nonfermentable carbon source; necessary and sufficient for phosphorylation of the Mig2p transcription factor in response to alkaline stress; functionally redundant with SIP1 and SIP2 for the phosphorylation of Mig1p in response to glucose deprivation; contains a glycogen-binding domain","termid":"PBO:0085182"}


id: GO:0032699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"negatively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-16 production","secondary_identifiers":["GO:0045376"],"synonyms":[{"name":"down regulation of interleukin-16 production","type":"exact"},{"name":"down-regulation of interleukin-16 production","type":"exact"},{"name":"downregulation of interleukin-16 production","type":"exact"},{"name":"inhibition of interleukin-16 production","type":"narrow"},{"name":"negative regulation of IL-16 production","type":"exact"},{"name":"negative regulation of interleukin-16 biosynthetic process","type":"narrow"}],"termid":"GO:0032699"}


id: PBO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS1 biogenesis of lysosomal organelles complex 3 subunit 1","termid":"PBO:0050543"}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:15890777","GOC:krc","PMID:15286082","PMID:22122073","PMID:28320827","PMID:32616437","PMID:17047368","PMID:25565961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: GO:0005823
data:
  {"annotated_genes":["SJAG_02246","SJAG_04901","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94371,92960,95924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the spindle pole body; the central plaque is embedded in the nuclear envelope.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"central plaque of spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005823","terms_by_termid":{"GO:0061493":null}}


id: GO:0048937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a lateral line glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell development","termid":"GO:0048937"}


id: GO:0015230
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103631],"is_not":false,"summary":null,"term":"GO:0015230"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of flavin-adenine dinucleotide (FAD) from one side of a membrane to the other. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"FAD transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005472"],"synonyms":[{"name":"FAD carrier activity","type":"related"},{"name":"FAD transporter activity","type":"broad"},{"name":"flavin adenine dinucleotide carrier activity","type":"related"},{"name":"flavin adenine dinucleotide transmembrane transporter activity","type":"exact"},{"name":"flavin-adenine dinucleotide carrier activity","type":"related"},{"name":"flavin-adenine dinucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015230","terms_by_termid":{"GO:0015230":null}}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: GO:0061582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an intestinal epithelial cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell migration","termid":"GO:0061582"}


id: GO:0042848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"sorbose catabolic process","synonyms":[{"name":"sorbose breakdown","type":"exact"},{"name":"sorbose catabolism","type":"exact"},{"name":"sorbose degradation","type":"exact"}],"termid":"GO:0042848"}


id: PBO:0035872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules_curved_around_cell_end_during_mitotic_interphase","termid":"PBO:0035872"}


id: GO:0018464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypimelyl-CoA + NAD+ = 3-oxopimelyl-CoA + H+ + NADH.","definition_xrefs":["EC:1.1.1.259","RHEA:11168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxypimeloyl-CoA dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0196","KEGG_REACTION:R05305","MetaCyc:1.1.1.259-RXN"],"synonyms":[{"name":"3-hydroxypimeloyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018464"}


id: PBO:0068852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 90, pseudogene","termid":"PBO:0068852"}


id: GO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine binding","termid":"GO:0019958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-8 binding","synonyms":[{"name":"IL-8 binding","type":"exact"}],"termid":"GO:0019959"}


id: PBO:0055187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2611","termid":"PBO:0055187"}


id: PBO:0086958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of phospholipase D (Spo14p); interacts with Spo14p and regulates its catalytic activity; capable of buffering the toxicity of C16:0 platelet activating factor, a lipid that accumulates intraneuronally in Alzheimer's patients","termid":"PBO:0086958"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: PBO:0058864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9851","termid":"PBO:0058864"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_04693","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109152],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: GO:1903434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:22899725","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"negatively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of constitutive secretory pathway","synonyms":[{"name":"down regulation of constitutive secretory pathway","type":"exact"},{"name":"down-regulation of constitutive secretory pathway","type":"exact"},{"name":"downregulation of constitutive secretory pathway","type":"exact"},{"name":"inhibition of constitutive secretory pathway","type":"narrow"}],"termid":"GO:1903434"}


id: PBO:0052270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4D","termid":"PBO:0052270"}


id: SO:0000535
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_J_C_cluster","synonyms":[{"name":"V J C cluster","type":"exact"},{"name":"V-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000535"}


id: PR:Q92355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sen1 gene.","definition_xrefs":["UniProtKB:Q92355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase sen1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.10c","synonyms":[{"name":"Spom972h-sen1","type":"exact"}],"termid":"PR:Q92355"}


id: PBO:0084983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase; catalyzes isomerization of (R)- and (S)-NADHX; homologous to AIBP in mammals and the N- terminal domain of YjeF in E.coli; enzyme is widespread in eukaryotes, prokaryotes and archaea; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084983"}


id: PBO:0045427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 7","termid":"PBO:0045427"}


id: SO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been predicted using sequence similarity techniques.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supported_by_sequence_similarity","synonyms":[{"name":"supported by sequence similarity","type":"exact"}],"termid":"SO:0000907"}


id: GO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the trochlear nerve to attain its fully functional state. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve maturation","synonyms":[{"name":"CN IV maturation","type":"related"}],"termid":"GO:0021640"}


id: PBO:0031534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031534"}


id: GO:0038117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 19 (CCL19) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15059845","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C motif chemokine 19 receptor activity","synonyms":[{"name":"CCL19 receptor activity","type":"related"}],"termid":"GO:0038117"}


id: PBO:0048900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 24","termid":"PBO:0048900"}


id: PBO:0069914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1206, pseudogene","termid":"PBO:0069914"}


id: PATO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its stable specialization to a particular cell type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentiated","termid":"PATO:0002099"}


id: PBO:0075930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 22","termid":"PBO:0075930"}


id: GO:0070712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an cytidine-uridine dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA cytidine-uridine insertion","synonyms":[{"name":"RNA CU insertion","type":"exact"}],"termid":"GO:0070712"}


id: PR:O13820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg5 gene.","definition_xrefs":["UniProtKB:O13820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.04","synonyms":[{"name":"C-22 sterol desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg5","type":"exact"}],"termid":"PR:O13820"}


id: PBO:0079777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose glycoprotein glucosyltransferase 2","termid":"PBO:0079777"}


id: GO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","termid":"GO:0075260"}


id: PBO:0091628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase, implicated in cellular detoxification","termid":"PBO:0091628"}


id: SO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an exon.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_region","synonyms":[{"name":"exon region","type":"exact"}],"termid":"SO:0000852"}


id: PBO:0042482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 8","termid":"PBO:0042482"}


id: GO:0071021
data:
  {"annotated_genes":["SJAG_02455"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110412],"is_not":false,"summary":null,"term":"GO:0071021"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, U5, U2 and U6.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"post-spliceosomal complex","termid":"GO:0071020"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2-type post-spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG post-spliceosomal complex","type":"narrow"},{"name":"major post-spliceosomal complex","type":"exact"},{"name":"mammalian U2-type spliceosomal complex C2","type":"narrow"},{"name":"yeast U2-type spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071021","terms_by_termid":{"GO:0071021":null}}


id: PBO:0013073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4","termid":"PBO:0013073"}


id: PBO:0071885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 23","termid":"PBO:0071885"}


id: PR:Q9UUJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.15c","synonyms":[{"name":"Spom972h-rec24","type":"exact"},{"name":"meiotically up-regulated gene 6 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ4"}


id: GO:0038170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to a somatostatin receptor (SSTR), and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["Wikipedia:Somatostatin","PMID:18006219","GOC:nhn","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"somatostatin receptor signaling pathway","termid":"GO:0038169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin signaling pathway","synonyms":[{"name":"SRIF signaling pathway","type":"exact"},{"name":"SST signaling pathway","type":"exact"},{"name":"somatostatin signalling pathway","type":"exact"},{"name":"somatostatin-activated somatostatin receptor signaling pathway","type":"exact"},{"name":"somatostatin-mediated signaling pathway","type":"exact"},{"name":"somatotrophin release inhibiting factor signaling pathway","type":"exact"}],"termid":"GO:0038170"}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_01831","SJAG_05019","SJAG_03926","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83972,103805,103883,113094],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PBO:0080628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 75","termid":"PBO:0080628"}


id: PR:G2TRS3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kish-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kish (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.16","secondary_identifiers":["UniProtKB:G2TRS3"],"synonyms":[{"name":"Spom972h-TMEM167A","type":"exact"}],"termid":"PR:G2TRS3"}


id: PATO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its having most of the cellular characteristics of the tissue of origin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"well differentiated","termid":"PATO:0002110"}


id: PBO:0041948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 8","termid":"PBO:0041948"}


id: SO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Imprinted genes are epigenetically modified genes that are expressed monoallelically according to their parent of origin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"},{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_imprinted","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Genomic_imprinting"],"synonyms":[{"name":"genomically imprinted","type":"exact"},{"name":"imprinted","type":"broad"}],"termid":"SO:0000134"}


id: PBO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx3, Cdc48 cofactor","termid":"PBO:0001095"}


id: GO:1990129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication restart after a stalled replication fork has been repaired.","definition_xrefs":["PMID:17139333","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication restart (obsolete GO:1990129)","synonyms":[{"name":"pre-primosome complex involved in replication restart","type":"exact"}],"termid":"GO:1990129"}


id: GO:2000440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"regulation of TLR15 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000440"}


id: GO:0018523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quinoline + acceptor + H2O = isoquinolin-1(2H)-one + reduced acceptor.","definition_xrefs":["EC:1.3.99.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinoline 2-oxidoreductase activity","secondary_identifiers":["MetaCyc:1.3.99.17-RXN","RHEA:17749","UM-BBD_reactionID:r0045"],"synonyms":[{"name":"quinoline:acceptor 2-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0018523"}


id: PBO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel subunit/aldo-keto reductase (predicted)","termid":"PBO:0011526"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: GO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to benzoic acid","termid":"GO:0080021"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to benzoic acid","termid":"GO:0071319"}


id: SO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"rRNA is an RNA component of a ribosome that can provide both structural scaffolding and catalytic activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_primary_transcript","termid":"SO:0000209"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/RRNA"],"synonyms":[{"name":"INSDC_feature:rRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"ribosomal RNA","type":"exact"},{"name":"ribosomal ribonucleic acid","type":"exact"}],"termid":"SO:0000252"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: PBO:0083934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN2 has a paralog, CLN1, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083934"}


id: PBO:0052713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 5","termid":"PBO:0052713"}


id: FYPO:0000314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and does not go on to give rise to a viable cell population.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable after spore germination with abnormal germ tube morphology","termid":"FYPO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination with elongated germ tube","synonyms":[{"name":"inviable after spore germination, elongated cell","type":"exact"},{"name":"inviable following spore germination with elongated germ tube","type":"exact"},{"name":"inviable germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0000314"}


id: PBO:0056175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF1 homolog, negative regulator of RNA polymerase III","termid":"PBO:0056175"}


id: GO:0018330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient guanylylation of lysine to form N6-(phospho-5'-guanosine)-L-lysine, found in the guanylyltransferase active site of mRNA capping enzyme.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-(phospho-5'-guanosine)-L-lysine (obsolete GO:0018330)","termid":"GO:0018330"}


id: PBO:0062725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 4 pseudogene","termid":"PBO:0062725"}


id: GO:0015535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fucose(out) + H+(out) = fucose(in) + H+(in).","definition_xrefs":["TC:2.A.1.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"fucose transmembrane transporter activity","termid":"GO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fucose:proton symporter activity","secondary_identifiers":["RHEA:29023","MetaCyc:TRANS-RXN-20"],"synonyms":[{"name":"fucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015535"}


id: PBO:0084350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the nuclear mRNA cap-binding protein complex; interacts with Npl3p to carry nuclear poly(A)+ mRNA to cytoplasm; also involved in nuclear mRNA degradation and telomere maintenance; orthologous to mammalian CBP80","termid":"PBO:0084350"}


id: PR:O94756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu14 gene.","definition_xrefs":["UniProtKB:O94756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.03","synonyms":[{"name":"Spom972h-meu14","type":"exact"}],"termid":"PR:O94756"}


id: GO:1990086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["CL:0011004","GOC:hjd","PMID:11095619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell apoptotic process","termid":"GO:1990086"}


id: PBO:0072241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 16","termid":"PBO:0072241"}


id: GO:0006649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of a phospholipid from its site of synthesis to the plasma membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phospholipid transfer to membrane","termid":"GO:0006649"}


id: PBO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q31)","termid":"PBO:0047858"}


id: GO:1990353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex. In D. melanogaster, it regulates ubiquitination and proteolysis of the BMP receptor Thickveins in cystoblasts, potentially by controlling Tkv ubiquitination and degradation.","definition_xrefs":["GOC:bhm","PMID:21145463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Fused-Smurf ubiquitin ligase complex","termid":"GO:1990353"}


id: PBO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 3, pseudogene","termid":"PBO:0051841"}


id: PBO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 24, pseudogene","termid":"PBO:0044446"}


id: PBO:0026670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_phase_transition","termid":"PBO:0026670"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: GO:0061045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing","termid":"GO:0061045"}


id: PBO:0050047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, J (pseudogene)","termid":"PBO:0050047"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: PBO:0047139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 174 member B","termid":"PBO:0047139"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: PBO:0003712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding vezatin family protein involved in peroxisome inheritance Inp2 (predicted)","termid":"PBO:0003712"}


id: PBO:0003075
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Gpa2","termid":"PBO:0003075"}


id: PBO:0109321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20/Hsp15.8","termid":"PBO:0109321"}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: PBO:0091000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27, zinc-binding domain superfamily (S27-like)","termid":"PBO:0091000"}


id: GO:1901241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 4-hydroxyphenylacetate from one side of a membrane to the other.","definition_xrefs":["PMID:9315705","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"4-hydroxyphenylacetate transmembrane transporter activity","secondary_identifiers":["RHEA:33175"],"termid":"GO:1901241"}


id: PBO:0083683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal SNARE related to mammalian syntaxin 8","termid":"PBO:0083683"}


id: GO:1903037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GOC:BHF","PMID:21106532","GOC:TermGenie","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"regulation of leukocyte adhesion","type":"exact"},{"name":"regulation of leukocyte cell adhesion","type":"exact"}],"termid":"GO:1903037"}


id: FYPO:0003931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has no septum and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0000032","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"inviable aseptate vegetative cell","synonyms":[{"name":"inviable aseptate cell during mitotic cell cycle","type":"related"},{"name":"inviable aseptate cell during vegetative growth","type":"exact"},{"name":"lethal; aseptate vegetative cell","type":"exact"}],"termid":"FYPO:0003931"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: PBO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_peroxisomal_transport","termid":"PBO:0031687"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: GO:0042008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-18 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-18 receptor activity","synonyms":[{"name":"IL-18 receptor activity","type":"exact"},{"name":"IL-18R","type":"exact"}],"termid":"GO:0042008"}


id: PBO:0078805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 22-1","termid":"PBO:0078805"}


id: GO:0060983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the epicardium acquires specialized features of a cardiac vascular smooth muscle cell. A cardiac vascular smooth muscle cell covers the heart vasculature and lacks transverse striations in its constituent fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac vascular smooth muscle cell differentiation","termid":"GO:0060983"}


id: GO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-citramalyl-CoA = pyruvate + acetyl-CoA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(3R)-citramalyl-CoA lyase activity","secondary_identifiers":["RHEA:38275","MetaCyc:RXN-13231","EC:4.1.3.46"],"synonyms":[{"name":"Ccl","type":"related"},{"name":"R-citramalyl-CoA lyase activity","type":"exact"}],"termid":"GO:0044101"}


id: RO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between a disease or an organism and a phenotype","direct_ancestors":[{"relation_name":"is_a","term_name":"has_phenotype","termid":"RO:0002200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_symptom","termid":"RO:0002452"}


id: PBO:0089406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S7","termid":"PBO:0089406"}


id: FYECO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ZnCl2","synonyms":[{"name":"zinc chloride added","type":"exact"}],"termid":"FYECO:0000173"}


id: GO:2000481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"positive regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of AMPK","type":"related"},{"name":"positive regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"positive regulation of PKA","type":"related"},{"name":"positive regulation of PKA C","type":"related"},{"name":"positive regulation of STK22","type":"related"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"positive regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000481"}


id: PBO:0077979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 2-1","termid":"PBO:0077979"}


id: PBO:0059494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1 receptor","termid":"PBO:0059494"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: GO:1902846
data:
  {"annotated_genes":["SJAG_04597","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86133,90514],"is_not":false,"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic spindle elongation","type":"narrow"},{"name":"activation of spindle elongation during mitosis","type":"narrow"},{"name":"positive regulation of spindle elongation during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle elongation","type":"exact"},{"name":"up regulation of spindle elongation during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle elongation","type":"exact"},{"name":"up-regulation of spindle elongation during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle elongation","type":"exact"},{"name":"upregulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902846","terms_by_termid":{"GO:1902846":null}}


id: PBO:0027659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_cellular_response_to_hydroxyurea","termid":"PBO:0027659"}


id: GO:0032501
data:
  {"annotated_genes":["SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045056"}]},"cv_name":"biological_process","definition":"Any biological process, occurring at the level of a multicellular organism, pertinent to its function.","definition_xrefs":["GOC:tb","GOC:dph","GOC:curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0044707","GO:0050874"],"synonyms":[{"name":"organismal physiological process","type":"exact"},{"name":"single-multicellular organism process","type":"related"}],"termid":"GO:0032501","terms_by_termid":{"GO:0045056":null}}


id: PBO:0028567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_homologous_chromosome_biorientation","termid":"PBO:0028567"}


id: PBO:0054548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1948","termid":"PBO:0054548"}


id: PBO:0083862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl pyrophosphate synthetase; has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis","termid":"PBO:0083862"}


id: PBO:0038480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 5","termid":"PBO:0038480"}


id: PBO:0078297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-2","termid":"PBO:0078297"}


id: GO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament disassembly","termid":"GO:0031035"},{"relation_name":"is_a","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"myosin II filament disassembly","synonyms":[{"name":"myosin II depolymerization","type":"related"}],"termid":"GO:0031037"}


id: GO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 neuropeptide Y receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide Y receptor binding","termid":"GO:0031841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 2 neuropeptide Y receptor binding","synonyms":[{"name":"type 2 neuropeptide Y receptor ligand","type":"narrow"}],"termid":"GO:0031843"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: GO:0019387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"methanogenesis, from methanol","secondary_identifiers":["MetaCyc:METHFORM-PWY"],"synonyms":[{"name":"methane biosynthesis from methanol","type":"exact"},{"name":"methane biosynthetic process from methanol","type":"exact"}],"termid":"GO:0019387"}


id: PBO:0109407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U2 snRNA-specific guide RNA","termid":"PBO:0109407"}


id: PBO:0073603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 3","termid":"PBO:0073603"}


id: PBO:0059868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 6","termid":"PBO:0059868"}


id: PBO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucan_level","termid":"PBO:0030611"}


id: PBO:0083654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease involved in processing DNA; acts during recombination, repair; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); cleaves branched structures in complex with Slx1p; involved in interstrand cross-link repair, Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing; relative distribution to nuclear foci increases upon DNA replication stress; FANCP-related factor","termid":"PBO:0083654"}


id: PBO:0051997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji and AT-rich interaction domain containing 2","termid":"PBO:0051997"}


id: GO:0097452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.","definition_xrefs":["GOC:br","PMID:23071094","PMID:15479637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GAIT complex","synonyms":[{"name":"IFN-gamma-activated inhibitor of translation complex","type":"exact"},{"name":"gamma interferon-activated inhibitor of translation complex","type":"exact"}],"termid":"GO:0097452"}


id: GO:0070167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of biomineral tissue development","termid":"GO:0070167"}


id: PBO:0079854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B3 (pseudogene)","termid":"PBO:0079854"}


id: PBO:0003996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck2","termid":"PBO:0003996"}


id: GO:0032157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane of the prospore envelope in meiotic cells in preparation for completing cytokinesis.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic actomyosin contractile ring","termid":"GO:0110086"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575","GO:0015629","GO:0070938"],"is_obsolete":false,"name":"prospore contractile ring","synonyms":[{"name":"actomyosin ring","type":"related"},{"name":"cytokinetic ring","type":"related"},{"name":"meiotic contractile ring","type":"related"}],"termid":"GO:0032157"}


id: PBO:0077052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB intronic transcript 1","termid":"PBO:0077052"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: PBO:0045556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8","termid":"PBO:0045556"}


id: PBO:0063030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 2","termid":"PBO:0063030"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = dimethylmenaquinone + diphosphate + CO2.","definition_xrefs":["RHEA:30099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate octaprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:DMK-RXN"],"synonyms":[{"name":"1,4-Dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: MOD:01599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-118 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01599"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: PBO:0108704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein for Arf6, Ucp3","termid":"PBO:0108704"}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: PBO:0018088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized ubiquitin-protein ligase E3 Doa10 (predicted)","termid":"PBO:0018088"}


id: PBO:0089211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II, GTPase eRF3","termid":"PBO:0089211"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: PBO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Like Protein","termid":"PBO:0016966"}


id: PR:Q10140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.04","synonyms":[{"name":"Spom972h-SPAC3H8.04","type":"exact"}],"termid":"PR:Q10140"}


id: GO:0016502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A nucleotide is a compound that consists of a nucleoside esterified with a phosphate molecule.","definition_xrefs":["ISBN:0198506732","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nucleotide receptor activity","termid":"GO:0016502"}


id: PBO:0003585
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof Six Interacting Protein","termid":"PBO:0003585"}


id: GO:0100041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates pseudohyphal growth.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100041)","termid":"GO:0100041"}


id: PBO:0075129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U4/U6.U5 subunit 27","termid":"PBO:0075129"}


id: PBO:0005674
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.7.3.3","termid":"PBO:0005674"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: GO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mast cell in response to an external stimulus.","definition_xrefs":["PMID:11292027","GOC:add","PMID:16448392","PMID:12789214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mast cell migration","termid":"GO:0097531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell chemotaxis","termid":"GO:0002551"}


id: PBO:0086311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with rhodanese activity; contains a rhodanese-like domain similar to Rdl1p, Uba4p, Tum1p, and Ych1p; overexpression causes a cell cycle delay; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086311"}


id: GO:0021978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:mgi_curators","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon regionalization","termid":"GO:0021978"}


id: GO:0097446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["GOC:mah","GOC:vw","PMID:22869600","PMID:23722945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to eisosome filament","synonyms":[{"name":"protein localization to linear eisosome","type":"exact"}],"termid":"GO:0097446"}


id: GO:0003397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite of a neuron in the amphid sensory organ.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration involved in dendrite retrograde extension","termid":"GO:0003395"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003397"}


id: PBO:0070240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 180 pseudogene","termid":"PBO:0070240"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: GO:1904372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to actin cortical patch","termid":"GO:1904370"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell cortex","termid":"GO:1904778"},{"relation_name":"positively_regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to actin cortical patch","synonyms":[{"name":"activation of protein localisation to actin cortical patch","type":"narrow"},{"name":"activation of protein localization to actin cortical patch","type":"narrow"},{"name":"positive regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up regulation of protein localization to actin cortical patch","type":"exact"},{"name":"up-regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"up-regulation of protein localization to actin cortical patch","type":"exact"},{"name":"upregulation of protein localisation to actin cortical patch","type":"exact"},{"name":"upregulation of protein localization to actin cortical patch","type":"exact"}],"termid":"GO:1904372"}


id: PBO:0085833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; msc3 mutants are defective in directing meiotic recombination events to homologous chromatids; potential Cdc28p substrate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085833"}


id: GO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an arabinoxylan, a polymer containing a beta-1,4-linked D-xylose backbone decorated with arabinose side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinoxylan-containing compound metabolic process","synonyms":[{"name":"arabinoxylan metabolic process","type":"related"},{"name":"arabinoxylan metabolism","type":"related"}],"termid":"GO:0010416"}


id: PBO:0014612
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpb3 was previously considered to be SPAC17G8.03c but this new gene product appears to be the true ortholog of DPB3/POLE4 see TreeFam:TF103009","termid":"PBO:0014612"}


id: PBO:0046048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 1","termid":"PBO:0046048"}


id: PBO:0109403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 30, pseudogene","termid":"PBO:0109403"}


id: PBO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, rrm type","termid":"PBO:0005695"}


id: GO:0060101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis","termid":"GO:0050765"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"negative regulation of membrane invagination","termid":"GO:1905154"},{"relation_name":"negatively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: GO:0021999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate.","definition_xrefs":["GOC:jid","GOC:dph","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate anterior/posterior regionalization","synonyms":[{"name":"neural plate anterior/posterior pattern formation","type":"related"}],"termid":"GO:0021999"}


id: PBO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A5","termid":"PBO:0043779"}


id: GO:1904674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell population maintenance","termid":"GO:1902459"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"positively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell population maintenance","synonyms":[{"name":"activation of somatic stem cell population maintenance","type":"narrow"},{"name":"up regulation of somatic stem cell population maintenance","type":"exact"},{"name":"up-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"upregulation of somatic stem cell population maintenance","type":"exact"}],"termid":"GO:1904674"}


id: PBO:0044857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene 2","termid":"PBO:0044857"}


id: GO:1900879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"},{"relation_name":"is_a","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"(Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900879"}


id: GO:0044131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the symbiont stops, prevents or reduces its progression from an initial condition to a later condition, within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development of symbiont in host","termid":"GO:0044127"},{"relation_name":"is_a","term_name":"negative regulation of formation of structure involved in a symbiotic process","termid":"GO:0044147"},{"relation_name":"negatively_regulates","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of development of symbiont in host","termid":"GO:0044131"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0058277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4654","termid":"PBO:0058277"}


id: PBO:0111932
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0111932"}


id: GO:0030369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ICAM-3, intercellular adhesion molecule 3, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. ICAM-3, or CD50, are constitutively expressed on monocytes, granulocytes and lymphocytes; on physiological stimulation, they become transiently phosphorylated on serine residues.","definition_xrefs":["PMID:7515813","GOC:ai","GOC:signaling","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ICAM-3 receptor activity","termid":"GO:0030369"}


id: GO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of an atrial cardiomyocyte with an AV node cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0098631"],"is_obsolete":false,"name":"cell adhesive protein binding involved in atrial cardiac muscle cell-AV node cell communication","synonyms":[{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-AV node cell communication","type":"exact"},{"name":"cell adhesive protein binding involved in atrial cardiomyocyte-atrioventricular node cell communication","type":"exact"}],"termid":"GO:0086081"}


id: PBO:0080249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 12, pseudogene","termid":"PBO:0080249"}


id: PBO:0041112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binder of sperm protein homolog 1","termid":"PBO:0041112"}


id: PBO:0050685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 12","termid":"PBO:0050685"}


id: GO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly.","definition_xrefs":["GOC:cilia","GOC:bf","Reactome:R-HSA-5620924.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"intraciliary transport involved in cilium assembly","synonyms":[{"name":"intraciliary transport involved in cilium morphogenesis","type":"related"},{"name":"intraflagellar transport","type":"broad"},{"name":"intraflagellar transport involved in cilium morphogenesis","type":"related"}],"termid":"GO:0035735"}


id: GO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the cell surface antigen CD98.","definition_xrefs":["PMID:18032696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-CD98 complex","synonyms":[{"name":"ITGAV-ITGB3-SLC3A2 complex","type":"narrow"}],"termid":"GO:0071137"}


id: GO:0034537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-3-methylbenzalpyruvate + H2O = pyruvate + 3-methylsalicylaldehyde.","definition_xrefs":["PMID:8042906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-3-methylbenzalpyruvate hydratase-aldolase activity","secondary_identifiers":["UM-BBD_reactionID:r0783"],"termid":"GO:0034537"}


id: GO:1901776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mitomycin C.","definition_xrefs":["GOC:TermGenie","PMID:10094699","PMID:10099135","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"mitomycin C catabolic process","synonyms":[{"name":"mitomycin C breakdown","type":"exact"},{"name":"mitomycin C catabolism","type":"exact"},{"name":"mitomycin C degradation","type":"exact"}],"termid":"GO:1901776"}


id: GO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular organelle part (obsolete GO:0044446)","termid":"GO:0044446"}


id: PBO:0071036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 38","termid":"PBO:0071036"}


id: PBO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_curator_name","termid":"PBO:0034026"}


id: PBO:0065026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4","termid":"PBO:0065026"}


id: PBO:0059078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 1","termid":"PBO:0059078"}


id: GO:0120123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex responsible for the catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["GOC:lnp","PMID:9545234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquitin activating enzyme complex","synonyms":[{"name":"E1 complex","type":"exact"},{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0120123"}


id: PBO:0086820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR085W and adjacent ORF YMR084W are merged in related strains, and together are paralogous to glutamine-fructose-6-phosphate amidotransferase GFA1","termid":"PBO:0086820"}


id: GO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of phytoalexins produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont phytoalexin production (obsolete GO:0052568)","synonyms":[{"name":"response to symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052568"}


id: PBO:0082396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of geranylgeranyltransferase type I; subunit of the Ram2p-Cdc43p heterodimer that catalyzes the geranylgeranylation of the cysteine residue in proteins containing a C-terminal CaaX sequence ending in Leu or Phe; has substrates important for morphogenesis","termid":"PBO:0082396"}


id: SO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter whereby activity is induced by the presence or absence of biotic or abiotic factors.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible_promoter","synonyms":[{"name":"inducible promoter","type":"exact"}],"termid":"SO:0002051"}


id: GO:0102780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + sitosterol + O2 + NADPH = (22alpha)-hydroxy-sitosterol + H2O + NADP.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sitosterol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7876"],"termid":"GO:0102780"}


id: PBO:0011999
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as a pseudogene","termid":"PBO:0011999"}


id: FYPO:0007980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with microtubule overlaps longer than normal.","definition_xrefs":["PomBase:mlr","PMID:15837798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"Increased microtubule overlap length in bundles during mitotic interphase:","termid":"FYPO:0007980"}


id: PATO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased number of physical objects that are accumulated within another physical object usually as a result of a failure to break down or remove objects in a timely manner.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"accumulation","termid":"PATO:0002269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased accumulation","synonyms":[{"name":"accumulated","type":"exact"}],"termid":"PATO:0002270"}


id: GO:2001130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a trimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["PMID:10769383","GO_REF:0000079","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: PBO:0062188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily P member 4","termid":"PBO:0062188"}


id: PBO:0067119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 164, pseudogene","termid":"PBO:0067119"}


id: GO:0072580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lysine residue in a protein to produce (2S)-2-amino-6-([(3S)-3,6-diaminohexanoyl]amino)hexanoic acid, and the subsequent hydroxylation of the modified lysine residue. This modification is observed in, and is probably unique to, the prokaryotic translation elongation factor P (EF-P).","definition_xrefs":["GOC:mah","PMID:22706199","GOC:curators","GOC:imk","RESID:AA0531","PMID:20729861","RESID:AA0530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type EF-P lysine modification","synonyms":[{"name":"EF-P modification pathway","type":"exact"}],"termid":"GO:0072580"}


id: PBO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_leucine","termid":"PBO:0031583"}


id: GO:0048628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast to attain its fully functional state. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:dph","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"myoblast development","termid":"GO:0048627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation","termid":"GO:0048628"}


id: PBO:0002986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (predicted)","termid":"PBO:0002986"}


id: PBO:0072508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 37","termid":"PBO:0072508"}


id: PBO:0091502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere proximal lncRNA","termid":"PBO:0091502"}


id: PBO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_centromeric_sister_chromatid_cohesion","termid":"PBO:0031747"}


id: PBO:0088540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein, with zinc finger, LIM-type","termid":"PBO:0088540"}


id: PBO:0049911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase D","termid":"PBO:0049911"}


id: PBO:0003620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0003620"}


id: PBO:0109626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-1 related endogenous sequence (pseudogene)","termid":"PBO:0109626"}


id: GO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactosamine from one side of a membrane to the other. Galactosamine is an aminodeoxysugar; D-galactosamine is a constituent of some glycolipids and glycosaminoglycans, commonly as its N-acetyl derivative.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"galactosamine transmembrane transporter activity","secondary_identifiers":["GO:0019195"],"synonyms":[{"name":"galactosamine porter activity","type":"exact"}],"termid":"GO:0019196"}


id: PBO:0013764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg14","termid":"PBO:0013764"}


id: PBO:0085687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recovery from cell cycle arrest; acts in response to pheromone; also involved in regulation of intra-S DNA damage checkpoint and autophagy; is essential for dephosphorylation of Atg13p; interacts with Far3p, Far7p, Far8p, Far9p, Far10p and with the phosphatases Pph21p, Pph22p and Pph3p; has similarity to the N- and C-termini of N. crassa HAM-2; similar to human Fam40A and Fam40B","termid":"PBO:0085687"}


id: PBO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOP1 leucine zipper like protein B","termid":"PBO:0045353"}


id: GO:0032279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of synapse occurring between an axon and a dendritic spine or dendritic shaft. Asymmetric synapses, the most abundant synapse type in the central nervous system, involve axons that contain predominantly spherical vesicles and contain a thickened postsynaptic density. Most or all synapses of this type are excitatory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric synapse","synonyms":[{"name":"Gray's type I synapse","type":"exact"}],"termid":"GO:0032279"}


id: GO:0106410
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98247],"is_not":false,"summary":null,"term":"GO:0106410"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of a box C/D RNA molecule.","definition_xrefs":["PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"},{"relation_name":"is_a","term_name":"snoRNA 2,2,7-trimethylguanosine (TMG) capping","termid":"GO:0180031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106410","terms_by_termid":{"GO:0106410":null}}


id: PATO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000131 relative size (obsolete PATO:0000131)","termid":"PATO:0000131"}


id: PBO:0028706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0028706"}


id: PBO:0086576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0086576"}


id: GO:0044671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sorocarp spore cell, a cell of the sorocarp sorus. A sorocarp is the fruiting body characteristic of certain cellular slime moulds (e.g., Dictyosteliida) and consists of both stalk and a sorus (spore mass).","definition_xrefs":["GOC:rjd","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"sorocarp sorus development","termid":"GO:0048837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp spore cell differentiation","termid":"GO:0044671"}


id: PBO:0044623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 2","termid":"PBO:0044623"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87796],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:31101919","GOC:sp","PMID:25533955","PMID:28283058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PBO:0031645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_respiration","termid":"PBO:0031645"}


id: PBO:0035905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_septation_index_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035905"}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["RHEA:10416","EC:4.1.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["MetaCyc:RXN-863","UM-BBD_enzymeID:e0259","KEGG_REACTION:R05598"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: PBO:0056733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 2","termid":"PBO:0056733"}


id: GO:0098002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry receptor-mediated virion attachment to host cell","termid":"GO:0098670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage irreversible attachment to host cell","synonyms":[{"name":"irreversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"},{"name":"phage irreversible adsorption","type":"related"}],"termid":"GO:0098002"}


id: PBO:0078212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-5 (pseudogene)","termid":"PBO:0078212"}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["GOC:TermGenie","PMID:22223481","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: GO:0019308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"dTDP-mannose metabolic process","termid":"GO:0046371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dTDP-mannose biosynthetic process","synonyms":[{"name":"dTDP-mannose anabolism","type":"exact"},{"name":"dTDP-mannose biosynthesis","type":"exact"},{"name":"dTDP-mannose formation","type":"exact"},{"name":"dTDP-mannose synthesis","type":"exact"}],"termid":"GO:0019308"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: PBO:0043937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRTC1 pseudogene 1","termid":"PBO:0043937"}


id: FYPO:0003185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"normal protein localisation to microtubule cytoskeleton during mitotic interphase","type":"exact"},{"name":"normal protein localization to microtubule cytoskeleton during interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0003185"}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: GO:0004857
data:
  {"annotated_genes":["SJAG_03629","SJAG_03272","SJAG_04505","SJAG_03931","SJAG_03309","SJAG_04999","SJAG_01348","SJAG_02874","SJAG_02786","SJAG_04398","SJAG_01245","SJAG_00460","SJAG_01210","SJAG_01118","SJAG_04627","SJAG_02380","SJAG_04203","SJAG_01515","SJAG_04699","SJAG_02485","SJAG_04633","SJAG_01072","SJAG_02594","SJAG_02194","SJAG_00452","SJAG_04546","SJAG_01821","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105303,113029],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[96521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[99360,112873,85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[84981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[112357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[93334,88302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[107234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[96044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[111367,103078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[85518,86411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[104471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[84017,107434,95518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[84982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"},{"annotations":[93184,91595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[89280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"},{"annotations":[91196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[94786,111600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[110679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an enzyme.","definition_xrefs":["GOC:ai","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01150":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03931":null,"SJAG_04203":null,"SJAG_04398":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"enzyme inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048551"],"synonyms":[{"name":"metalloenzyme inhibitor activity","type":"narrow"}],"termid":"GO:0004857","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005095":null,"GO:0008073":null,"GO:0008428":null,"GO:0010521":null,"GO:0030291":null,"GO:0030414":null,"GO:0055105":null,"GO:0060698":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: GO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-guanidino-1-deoxy-scyllo-inositol 4-phosphate + H2O = 1-guanidino-1-deoxy-scyllo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.40","RHEA:15777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"guanidinodeoxy-scyllo-inositol-4-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R03496","MetaCyc:3.1.3.40-RXN"],"synonyms":[{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-P phosphohydrolase activity","type":"related"},{"name":"1-guanidino-1-deoxy-scyllo-inositol-4-phosphate 4-phosphohydrolase activity","type":"related"},{"name":"1-guanidino-scyllo-inositol 4-phosphatase activity","type":"related"}],"termid":"GO:0047383"}


id: GO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052221)","synonyms":[{"name":"positive chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052221"}


id: MOD:00662
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a methylated leucine, either N-methylleucine, or leucine methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:00662"}


id: FYPO:0002999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortex during vegetative growth","termid":"FYPO:0002558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to medial cortical node","synonyms":[{"name":"normal protein localisation to medial cortical node","type":"exact"},{"name":"normal protein localization to cortical medial dot","type":"exact"},{"name":"normal protein localization to cytokinetic nodes","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes","type":"exact"},{"name":"normal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0002999"}


id: PBO:0083861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl-diphosphate farnesyl transferase (squalene synthase); joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway","termid":"PBO:0083861"}


id: PBO:0087374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssDNA-binding protein essential for mitochondrial genome maintenance; involved in mitochondrial DNA replication; stimulates utilization by Mip1p DNA polymerase of RNA primers synthesized by Rpo41p","termid":"PBO:0087374"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: PBO:0110167
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_orcid","termid":"PBO:0110167"}


id: GO:0017181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthine, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthine catabolic process (obsolete GO:0017181)","synonyms":[{"name":"peptidyl-diphthine breakdown","type":"exact"},{"name":"peptidyl-diphthine catabolism","type":"exact"},{"name":"peptidyl-diphthine degradation","type":"exact"}],"termid":"GO:0017181"}


id: PBO:0001103
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by glucose","termid":"PBO:0001103"}


id: PBO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 3","termid":"PBO:0050960"}


id: PR:Q9URW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing YSC84-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain-containing protein PJ696.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.02","secondary_identifiers":["UniProtKB:Q9URW6"],"synonyms":[{"name":"Spom972h-SH3YL1","type":"exact"}],"termid":"PR:Q9URW6"}


id: PBO:0064793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1L","termid":"PBO:0064793"}


id: PBO:0071162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 1","termid":"PBO:0071162"}


id: PBO:0055573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3009","termid":"PBO:0055573"}


id: GO:0140204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyridoxal from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"pyridoxal transmembrane transport","termid":"GO:1903090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"pyridoxal import across plasma membrane","termid":"GO:0140204"}


id: GO:0034942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienoic acid + ATP + CoASH = cis-2-methyl-5-isopropylhexa-2,5-dienoyl-CoA + AMP + PPi.","definition_xrefs":["UM-BBD_reactionID:r0988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cis-2-methyl-5-isopropylhexa-2,5-dienoate-CoA ligase activity","termid":"GO:0034942"}


id: PBO:0076830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 1","termid":"PBO:0076830"}


id: PBO:0012538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_agent","termid":"PBO:0012538"}


id: PBO:0054421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1817","termid":"PBO:0054421"}


id: PBO:0064601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F2 antisense RNA 2","termid":"PBO:0064601"}


id: GO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adonirubin + a reduced electron acceptor + oxygen = 3S,3'S-astaxanthin + an oxidized electron acceptor + H2O.","definition_xrefs":["MetaCyc:RXN-8187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"adonirubin 3-hydroxylase activity","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"beta-ring carotenoid 3-hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052612"}


id: PBO:0071483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 24","termid":"PBO:0071483"}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: GO:0005802
data:
  {"annotated_genes":["SJAG_01516","SJAG_00296","SJAG_01409","SJAG_02168","SJAG_00669","SJAG_03663","SJAG_02525","SJAG_03347","SJAG_04358","SJAG_03670","SJAG_02912","SJAG_01945","SJAG_01571","SJAG_02240","SJAG_04338","SJAG_01488","SJAG_04819","SJAG_01448","SJAG_02177","SJAG_03756","SJAG_03953","SJAG_05209","SJAG_05330","SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84814,88385,89274,92796,94801,95133,95552,95591,95836,95983,96264,97638,98737,99453,100140,100459,108550,113642,114505],"is_not":false,"summary":null,"term":"GO:0005802"},{"annotations":[91836,87325,86859,89312,103432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.","definition_xrefs":["GOC:vw","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00669":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02912":null,"SJAG_03347":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04338":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao9456487"],"synonyms":[{"name":"Golgi trans face","type":"related"},{"name":"Golgi trans-face","type":"related"},{"name":"TGN","type":"exact"},{"name":"late Golgi","type":"related"},{"name":"maturing face","type":"related"},{"name":"trans Golgi network","type":"exact"},{"name":"trans face","type":"broad"}],"termid":"GO:0005802","terms_by_termid":{"GO:0005802":null,"GO:0032588":null}}


id: GO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the production of molecular mediator of immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"}


id: FYPO:0004922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"},{"relation_name":"is_a","term_name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0005367"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with elongated inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0004922"}


id: GO:0061711
data:
  {"annotated_genes":["SJAG_04182","SJAG_00865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100220,110298],"is_not":false,"summary":null,"term":"GO:0061711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonylcarbamoyladenylate + adenine(37) in tRNA = AMP + N(6)-L-threonylcarbamoyladenine(37) in tRNA.","definition_xrefs":["EC:2.3.1.234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00865":null,"SJAG_04182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N(6)-L-threonylcarbamoyladenine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14570","RHEA:37059","Reactome:R-HSA-6784494"],"termid":"GO:0061711","terms_by_termid":{"GO:0061711":null}}


id: PBO:0088386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase","termid":"PBO:0088386"}


id: GO:0042338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen and cuticulin-based cuticle development","termid":"GO:0040002"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle development involved in collagen and cuticulin-based cuticle molting cycle","synonyms":[{"name":"collagen and cuticulin-based cuticle development during molting","type":"related"},{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042338"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol hexakisphosphate kinase/inositol pyrophosphate synthase (predicted)","termid":"PBO:0005196"}


id: GO:0045722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gluconeogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gluconeogenesis","termid":"GO:0006111"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"positively_regulates","term_name":"gluconeogenesis","termid":"GO:0006094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gluconeogenesis","synonyms":[{"name":"activation of gluconeogenesis","type":"narrow"},{"name":"stimulation of gluconeogenesis","type":"narrow"},{"name":"up regulation of gluconeogenesis","type":"exact"},{"name":"up-regulation of gluconeogenesis","type":"exact"},{"name":"upregulation of gluconeogenesis","type":"exact"}],"termid":"GO:0045722"}


id: PBO:0040516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonemal dynein light chain domain containing 1","termid":"PBO:0040516"}


id: GO:0016796
data:
  {"annotated_genes":["SJAG_02818","SJAG_03876","SJAG_03276","SJAG_04369","SJAG_02540","SJAG_03734","SJAG_02275","SJAG_01832","SJAG_04824","SJAG_02993","SJAG_04407","SJAG_05373","SJAG_04410","SJAG_03745","SJAG_01648","SJAG_03132","SJAG_01836","SJAG_04818","SJAG_04519","SJAG_01163","SJAG_00841","SJAG_00966","SJAG_04006","SJAG_00401","SJAG_04153","SJAG_01798","SJAG_02908","SJAG_01822","SJAG_06586","SJAG_00081","SJAG_01173","SJAG_02298","SJAG_04587","SJAG_05280","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101285,105179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[111373,99756,98166,86112,88357,103853,114313,112654,91733,95029,103529,101322,111701,107311,100478,104554,99025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[84552,93228,89093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[91062,86444,86751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[111726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[106021,84708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[93231,103829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[110484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[89509,111706,112655,108978,103854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[89830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[84711,103422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[93233,107646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00401":null,"SJAG_00841":null,"SJAG_00966":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01798":null,"SJAG_01822":null,"SJAG_01832":null,"SJAG_01836":null,"SJAG_02275":null,"SJAG_02298":null,"SJAG_02540":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_02993":null,"SJAG_03132":null,"SJAG_03276":null,"SJAG_03734":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04369":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04519":null,"SJAG_04587":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05280":null,"SJAG_05373":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788","GO:0004527"],"is_obsolete":false,"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.15.-"],"synonyms":[{"name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016796","terms_by_termid":{"GO:0000175":null,"GO:0004534":null,"GO:0004535":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008859":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null,"GO:1990838":null}}


id: PBO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 1","termid":"PBO:0045670"}


id: GO:0008199
data:
  {"annotated_genes":["SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109942],"is_not":false,"summary":null,"term":"GO:0008199"}]},"cv_name":"molecular_function","definition":"Binding to a ferric iron ion, Fe(III).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion binding","termid":"GO:0005506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ferric iron binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008199","terms_by_termid":{"GO:0008199":null}}


id: PBO:0092039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate/alpha-ketoglutarate dioxygenase","termid":"PBO:0092039"}


id: PBO:0048622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 3","termid":"PBO:0048622"}


id: PBO:0074124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 7","termid":"PBO:0074124"}


id: PBO:0081188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 1","termid":"PBO:0081188"}


id: PR:Q96WV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An androgen-induced gene 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02556","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0641 membrane protein PJ4664.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.05","secondary_identifiers":["UniProtKB:Q96WV4"],"synonyms":[{"name":"Spom972h-AIG1","type":"exact"}],"termid":"PR:Q96WV4"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


