# terms

id: PBO:0068990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 234, pseudogene","termid":"PBO:0068990"}


id: PBO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rik1/ddb1 subfamily","termid":"PBO:0001290"}


id: PBO:0059729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 3","termid":"PBO:0059729"}


id: GO:1904405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formaldehyde stimulus.","definition_xrefs":["GOC:TermGenie","PMID:9149109","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to formaldehyde","termid":"GO:1904404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to formaldehyde","termid":"GO:1904405"}


id: GO:0032443
data:
  {"annotated_genes":["SJAG_02104","SJAG_04018","SJAG_02044","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84720,84721,101893],"is_not":false,"summary":null,"term":"GO:0032443"},{"annotations":[89984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032443","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: PBO:0031366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_2-deoxyglucose","termid":"PBO:0031366"}


id: SO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a vertebrate immune system gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_pseudogene","synonyms":[{"name":"vertebrate immune system pseudogene","type":"exact"}],"termid":"SO:0002097"}


id: PBO:0110969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3126","termid":"PBO:0110969"}


id: GO:0150079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuroinflammatory response.","definition_xrefs":["PMID:18164423","GOC:bc","GOC:aruk","PMID:11099416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"negatively_regulates","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"}


id: GO:1902157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902157"}


id: FYPO:0007459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["GO:0140510","PomBase:mah","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during vegetative growth","type":"exact"}],"termid":"FYPO:0007459"}


id: GO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H2O = a prenal + L-cysteine + H2O2.","definition_xrefs":["RHEA:53892","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"prenylcysteine oxidase activity","secondary_identifiers":["MetaCyc:RXN-18932","EC:1.8.3.5"],"synonyms":[{"name":"S-prenyl-L-cysteine:oxygen oxidoreductase activity","type":"related"},{"name":"prenylcysteine lyase activity","type":"related"}],"termid":"GO:0001735"}


id: PBO:0059506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase II","termid":"PBO:0059506"}


id: PBO:0005099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0005099"}


id: PBO:0044723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 10 (pseudogene)","termid":"PBO:0044723"}


id: PBO:0034299
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bounds_sequence_of","termid":"PBO:0034299"}


id: MOD:00768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfone with neutral loss of CH3SO2H.","definition_xrefs":["PubMed:9004526","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 80 Da","termid":"MOD:00768"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: PBO:0085240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; has a potential role in the secretory pathway; CPR4 has a paralog, CPR8, that arose from the whole genome duplication","termid":"PBO:0085240"}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: PBO:0034759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ngg1/Ada3","termid":"PBO:0034759"}


id: PBO:0086723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene involved in chitin biosynthesis","termid":"PBO:0086723"}


id: PR:O74447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.02c","synonyms":[{"name":"Spom972h-SPCC16C4.02c","type":"exact"}],"termid":"PR:O74447"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: GO:0006406
data:
  {"annotated_genes":["SJAG_04148","SJAG_00992","SJAG_00093","SJAG_04536","SJAG_01652","SJAG_00178","SJAG_04115","SJAG_03986","SJAG_00375","SJAG_04379","SJAG_04202","SJAG_04589","SJAG_04480","SJAG_01374","SJAG_00298","SJAG_02704","SJAG_01584","SJAG_04347","SJAG_00471","SJAG_04310","SJAG_00641","SJAG_01065","SJAG_04645","SJAG_03693","SJAG_04472","SJAG_03283","SJAG_02534","SJAG_04656","SJAG_04017","SJAG_01083","SJAG_03300","SJAG_01185","SJAG_03847","SJAG_02209","SJAG_03002","SJAG_05328","SJAG_01449","SJAG_01529","SJAG_01715","SJAG_04721"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85144,85617,86736,93200,97226,99078,100019,101437,110942,111554,113289,113415],"is_not":false,"summary":null,"term":"GO:0006406"},{"annotations":[112466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[112106,101800,109306,102222,98043,98825,111848,104758,92635,111555,88295,111040,112363,112468,110511,87070,93049,98726,107179,105924,100020,112615,114033,103702,68837,97467,106491,97941,107809,114929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"mRNA transport","termid":"GO:0051028"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mRNA export from cell nucleus","type":"exact"},{"name":"mRNA export out of nucleus","type":"exact"},{"name":"mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"mRNA-nucleus export","type":"exact"}],"termid":"GO:0006406","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null}}


id: PBO:0042048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 105","termid":"PBO:0042048"}


id: MOD:01314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine.","definition_xrefs":["Unimod:64#K","PubMed:11857757","PubMed:12716131","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent light form (K)","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01314"}


id: PBO:0085760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in the cell cycle checkpoint into anaphase; in complex with Mad1p and Bub3p, prevents progression into anaphase in presence of spindle damage; Cdc28p-mediated phosphorylation at Bub1p-T566 is important for degradation in anaphase and adaptation of checkpoint to prolonged mitotic arrest; associates with centromere DNA via Skp1p; involved in Sgo1p relocalization in response to sister kinetochore tension; paralog MAD3 arose from whole genome duplication","termid":"PBO:0085760"}


id: PBO:0040234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6","termid":"PBO:0040234"}


id: GO:2000828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of parathyroid hormone secretion","synonyms":[{"name":"regulation of PTH secretion","type":"exact"},{"name":"regulation of parathormone secretion","type":"exact"},{"name":"regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000828"}


id: PBO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho1","termid":"PBO:0002421"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: GO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of CD4-positive, alpha-beta T cell differentiation.","definition_xrefs":["ISBN:0781735149","GOC:pr","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"regulation of CD4-positive T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive T-lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T cell development","type":"related"},{"name":"regulation of CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T-cell differentiation","type":"exact"},{"name":"regulation of CD4-positive, alpha beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043370"}


id: PBO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 10, pseudogene","termid":"PBO:0047719"}


id: GO:0032841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin, a peptide hormone responsible for reducing serum calcium levels by inhibiting osteoclastic bone reabsorption and promoting renal calcium excretion. It is synthesized and released by the C cells of the thyroid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcitonin binding","termid":"GO:0032841"}


id: PBO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup85","termid":"PBO:0003941"}


id: PBO:0059941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 27","termid":"PBO:0059941"}


id: PBO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DBR1","termid":"PBO:0036270"}


id: PBO:0028402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_respiratory_electron_transport","termid":"PBO:0028402"}


id: PBO:0058271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4649","termid":"PBO:0058271"}


id: PBO:0079886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 3, pseudogene","termid":"PBO:0079886"}


id: PBO:0066685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 3","termid":"PBO:0066685"}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: GO:0003065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream or released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"positive regulation of heart rate by epinephrine-norepinephrine","termid":"GO:0001996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by epinephrine","synonyms":[{"name":"adrenaline cardiac chronotropy","type":"exact"},{"name":"adrenaline regulation of the rate of heart muscle contraction","type":"exact"},{"name":"epinephrine cardiac chronotropy","type":"exact"},{"name":"positive regulation of heart contraction rate by epinephrine","type":"related"},{"name":"positive regulation of heart rate by adrenaline","type":"related"}],"termid":"GO:0003065"}


id: PBO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 20","termid":"PBO:0071018"}


id: SO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long, intervening non-coding RNA.","definition_xrefs":["PMID:23463798","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA_gene","synonyms":[{"name":"lincRNA gene","type":"exact"}],"termid":"SO:0001641"}


id: GO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemoglobin biosynthetic process","synonyms":[{"name":"regulation of haemoglobin biosynthesis","type":"exact"},{"name":"regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"regulation of hemoglobin anabolism","type":"exact"},{"name":"regulation of hemoglobin biosynthesis","type":"exact"},{"name":"regulation of hemoglobin formation","type":"exact"},{"name":"regulation of hemoglobin synthesis","type":"exact"}],"termid":"GO:0046984"}


id: GO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombinase complex disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombinase disassembly","termid":"GO:0062110"}


id: FYPO:0005937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at late replication origins is decreased.","definition_xrefs":["PMID:24656819","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at replication origin","termid":"FYPO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at late replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at late replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at late origin","type":"exact"},{"name":"decreased protein localization to chromatin at late replication origins during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at late replication origins during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at late replication origin","type":"exact"}],"termid":"FYPO:0005937"}


id: PBO:0048896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 17, pseudogene","termid":"PBO:0048896"}


id: PBO:0049648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 2","termid":"PBO:0049648"}


id: GO:0017014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent addition of a nitric oxide group to an amino acid within a protein.","definition_xrefs":["PMID:20972426","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nitrosylation","synonyms":[{"name":"protein amino acid nitrosylation","type":"exact"}],"termid":"GO:0017014"}


id: PBO:0083072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacid dehydratase; putative 2Fe-2S protein; catalyzes third step in the common pathway leading to biosynthesis of branched-chain amino acids","termid":"PBO:0083072"}


id: PBO:0073809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 14","termid":"PBO:0073809"}


id: PBO:0063947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINK1 antisense RNA","termid":"PBO:0063947"}


id: PBO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: FYECO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamate nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"PMG","type":"narrow"},{"name":"glucose minimal medium, glutamate nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamate nitrogen source","type":"related"}],"termid":"FYECO:0000263"}


id: FYPO:0003937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cell population growth is increased relative to normal. Increased growth may reflect an increased growth rate (i.e. faster growth), growth that occurs to a greater extent than normal, or both. Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"},{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth","synonyms":[{"name":"fast aerobic cell population growth","type":"narrow"},{"name":"increased aerobic cell population growth","type":"narrow"},{"name":"increased growth","type":"broad"}],"termid":"FYPO:0003937"}


id: GO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them.","definition_xrefs":["GOC:mah","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caffeine","termid":"GO:0031000"}


id: PBO:0088717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase","termid":"PBO:0088717"}


id: GO:0009947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the centrolateral axis. In plants, this axis is duplicated and runs from the midrib to the margin of the leaf.","definition_xrefs":["GOC:dsz","GOC:tb","ISBN:0865427429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"centrolateral pattern formation","termid":"GO:0097353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centrolateral axis specification","synonyms":[{"name":"centrolateral axis determination","type":"related"},{"name":"mediolateral axis specification","type":"exact"}],"termid":"GO:0009947"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: PR:Q9UTB1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf1 gene.","definition_xrefs":["UniProtKB:Q9UTB1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 domain-containing protein C25B8.07c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.07c","synonyms":[{"name":"Spom972h-rcf1","type":"exact"}],"termid":"PR:Q9UTB1"}


id: GO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol kinase activity (obsolete GO:0004428)","synonyms":[{"name":"inositol or phosphatidylinositol kinase activity","type":"exact"},{"name":"inositol/phosphatidylinositol kinase activity","type":"exact"}],"termid":"GO:0004428"}


id: PBO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32 (predicted)","termid":"PBO:0002042"}


id: PBO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I subfamily","termid":"PBO:0000746"}


id: GO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of meiosis and mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prophase","secondary_identifiers":["Wikipedia:Prophase"],"termid":"GO:0051324"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PR:O13845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 39 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01680","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rsd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.07c","secondary_identifiers":["UniProtKB:O13845"],"synonyms":[{"name":"Spom972h-RBM39","type":"exact"}],"termid":"PR:O13845"}


id: GO:0010434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a bract. This process pertains to the initial formation of a structure from unspecified parts. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["PMID:16554366","PO:0009055","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"bract morphogenesis","termid":"GO:0010433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract formation","termid":"GO:0010434"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: GO:0009309
data:
  {"annotated_genes":["SJAG_03632","SJAG_01346","SJAG_04481","SJAG_05007","SJAG_02505","SJAG_04546","SJAG_00043","SJAG_03167","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[107233],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[98833,109434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[109435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"},{"annotations":[100456,110710,87677,99578,93142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine anabolism","type":"exact"},{"name":"amine biosynthesis","type":"exact"},{"name":"amine formation","type":"exact"},{"name":"amine synthesis","type":"exact"}],"termid":"GO:0009309","terms_by_termid":{"GO:0000162":null,"GO:0006597":null,"GO:0008295":null,"GO:0010967":null,"GO:0033387":null}}


id: PBO:0069231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 486, pseudogene","termid":"PBO:0069231"}


id: PBO:0062631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 12","termid":"PBO:0062631"}


id: GO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide secretion","termid":"GO:0002793"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"positively_regulates","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"}


id: SO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-stranded DNA used to control macromolecular structure and function.","direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_constraint_sequence","synonyms":[{"name":"DNA constraint","type":"exact"},{"name":"DNA constraint sequence","type":"exact"}],"termid":"SO:0001009"}


id: GO:0033854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-arogenate = L-glutamate + prephenate.","definition_xrefs":["RHEA:22880","EC:2.6.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate-prephenate aminotransferase activity","secondary_identifiers":["MetaCyc:PREPHENATE-TRANSAMINE-RXN","KEGG_REACTION:R07276"],"synonyms":[{"name":"L-arogenate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-glutamate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033854"}


id: PBO:0077904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptase pseudogene 2","termid":"PBO:0077904"}


id: FYPO:0006808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules via the deadenylation-dependent pathway, which includes poly(A) tail shortening, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal deadenylation-dependent decay","synonyms":[{"name":"abnormal deadenylation-dependent decay during mitotic cell cycle","type":"related"},{"name":"abnormal deadenylation-dependent decay during vegetative growth","type":"exact"},{"name":"abnormal nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"FYPO:0006808"}


id: PBO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1A","termid":"PBO:0043672"}


id: PBO:0064777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase 2","termid":"PBO:0064777"}


id: GO:0033447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033447"}


id: PBO:0110815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, DUF2420 family, implicated in meiotic recombination, Rmr1","termid":"PBO:0110815"}


id: PBO:0085580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5' RNA end processing; substrates include mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p","termid":"PBO:0085580"}


id: PBO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA Break Localizing","termid":"PBO:0013048"}


id: PBO:0045537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase 1","termid":"PBO:0045537"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: GO:0032114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose-6-phosphatase activity, the catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate.","definition_xrefs":["GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate phosphatase activity","termid":"GO:0032113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glucose-6-phosphatase activity","termid":"GO:0032114"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: FYPO:0007264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"long eisosome filament","synonyms":[{"name":"elongated eisosome filament","type":"exact"},{"name":"increased eisosome filament length","type":"exact"},{"name":"long eisosome filament during mitotic cell cycle","type":"related"},{"name":"long eisosome filament during vegetative growth","type":"exact"},{"name":"long linear eisosomes","type":"exact"}],"termid":"FYPO:0007264"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11594:SF0","OMA:SCHPO02489","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: PBO:0054739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2148","termid":"PBO:0054739"}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: PBO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 7","termid":"PBO:0042981"}


id: GO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell proliferation that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"regulates","term_name":"cell proliferation involved in heart valve morphogenesis","termid":"GO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in heart valve morphogenesis","termid":"GO:0003250"}


id: PBO:0085050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein","termid":"PBO:0085050"}


id: GO:1901539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene metabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene metabolism","type":"exact"}],"termid":"GO:1901539"}


id: PBO:0063885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class O","termid":"PBO:0063885"}


id: PBO:0048558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha 3","termid":"PBO:0048558"}


id: GO:0002844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of immune response to tumor cell","termid":"GO:0002838"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to tumor cell","synonyms":[{"name":"down regulation of tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of tolerance induction to tumor cell","type":"narrow"},{"name":"negative regulation of tolerance induction to tumour cell","type":"exact"}],"termid":"GO:0002844"}


id: _global:translation_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is translation of Y if Y is translated by ribosome to create X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_of","termid":"_global:translation_of"}


id: PBO:0110266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrt1","termid":"PBO:0110266"}


id: PBO:0024867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UreG","termid":"PBO:0024867"}


id: PBO:0082809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved 90S pre-ribosomal component; essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis","termid":"PBO:0082809"}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: PBO:0080112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2 receptor","termid":"PBO:0080112"}


id: PBO:0085305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase and transcription/RNA-processing factor; associates with TFIIB and cleavage/polyadenylation factor Pta1p; exhibits phosphatase activity on serine-5 and serine-7 of the RNA polymerase II C-terminal domain; affects start site selection and transcriptional read through in vivo","termid":"PBO:0085305"}


id: PBO:0065451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 2","termid":"PBO:0065451"}


id: GO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet alpha granule.","definition_xrefs":["GOC:mah","PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"platelet alpha granule lumen","synonyms":[{"name":"platelet alpha-granule lumen","type":"exact"}],"termid":"GO:0031093"}


id: GO:1904394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of skeletal muscle acetylcholine-gated channel clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor clustering","termid":"GO:1903910"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle acetylcholine-gated channel clustering","termid":"GO:1904393"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle acetylcholine-gated channel clustering","termid":"GO:0071340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle acetylcholine-gated channel clustering","synonyms":[{"name":"down regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"down-regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"down-regulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"down-regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"downregulation of skeletal muscle AChR clustering","type":"exact"},{"name":"downregulation of skeletal muscle acetylcholine-gated channel clustering","type":"exact"},{"name":"downregulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"},{"name":"inhibition of skeletal muscle AChR clustering","type":"narrow"},{"name":"inhibition of skeletal muscle acetylcholine-gated channel clustering","type":"narrow"},{"name":"inhibition of skeletal muscle nicotinic acetylcholine receptor clustering","type":"narrow"},{"name":"negative regulation of skeletal muscle AChR clustering","type":"exact"},{"name":"negative regulation of skeletal muscle nicotinic acetylcholine receptor clustering","type":"exact"}],"termid":"GO:1904394"}


id: PBO:0040175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 6","termid":"PBO:0040175"}


id: FYPO:0004795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type) during a cycle of zygotic meiosis and sporulation. Zygotic meiosis and sporulation take place under conditions of continuous nitrogen starvation, in which haploid cells of the opposite mating types conjugate to form diploid zygotes that proceed immediately to undergo meiosis and sporulation.","definition_xrefs":["PMID:22558440","PMID:25891897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis","termid":"FYPO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal zygotic meiosis","synonyms":[{"name":"normal meiosis during zygotic meiosis","type":"exact"},{"name":"normal zygotic meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004795"}


id: GO:0000722
data:
  {"annotated_genes":["SJAG_05105","SJAG_05353","SJAG_01677","SJAG_00640","SJAG_05173","SJAG_06642","SJAG_06597","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85313,88826,88827,88828,88829,92280,107792,109000,109001,109002,109003,109004],"is_not":false,"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"Any recombinational process that contributes to the maintenance of proper telomeric length.","definition_xrefs":["PMID:11850777","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase-independent telomere maintenance","type":"related"}],"termid":"GO:0000722","terms_by_termid":{"GO:0000722":null}}


id: PBO:0077525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 239","termid":"PBO:0077525"}


id: PBO:0045349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyldiphosphatase 1","termid":"PBO:0045349"}


id: PBO:0046873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 3 member C2, pseudogene","termid":"PBO:0046873"}


id: PBO:0049226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 7","termid":"PBO:0049226"}


id: GO:0102650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-ACP + L-tryptophan + ATP = cyclo-acetoacetyl-L-tryptophan + AMP + diphosphoric acid + 2 H+ + a holo-[acyl-carrier protein].","definition_xrefs":["EC:6.3.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cyclo-acetoacetyl-L-tryptophan synthetase activity","secondary_identifiers":["MetaCyc:RXN-15811"],"termid":"GO:0102650"}


id: GO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal aspartate or glutamate from a peptide, with a preference for aspartate.","definition_xrefs":["EC:3.4.11.21"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyl aminopeptidase activity (obsolete GO:0042576)","synonyms":[{"name":"aspartyl aminopeptidase activity","type":"exact"}],"termid":"GO:0042576"}


id: FYPO:0004527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which any process of regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype during vegetative growth","termid":"FYPO:0001335"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of transcription during vegetative growth","secondary_identifiers":["FYPO:0006471"],"synonyms":[{"name":"abnormal regulation of cellular transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal regulation of gene-specific transcription during vegetative growth","type":"related"},{"name":"abnormal regulation of transcription during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of transcription, DNA-dependent, during vegetative growth","type":"exact"},{"name":"abnormal transcriptional control during vegetative growth","type":"broad"}],"termid":"FYPO:0004527"}


id: PBO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligodendrocyte myelin glycoprotein","termid":"PBO:0061867"}


id: GO:0099623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a change in membrane potential in the polarizing direction towards the resting potential in a cardiomyocyte.","definition_xrefs":["GOC:rl","GOC:dos","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization","termid":"GO:0060306"},{"relation_name":"regulates","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane repolarization","synonyms":[{"name":"heart repolarization","type":"related"},{"name":"regulation of cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0099623"}


id: PATO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000536 water sensitivity value (obsolete PATO:0000536)","termid":"PATO:0000536"}


id: GO:0009142
data:
  {"annotated_genes":["SJAG_00836","SJAG_02598","SJAG_00542","SJAG_00985","SJAG_02564","SJAG_03925","SJAG_MIT37","SJAG_01298","SJAG_04665","SJAG_05204","SJAG_00533","SJAG_04122","SJAG_04657","SJAG_MIT15","SJAG_00133","SJAG_00964","SJAG_MIT09","SJAG_05024","SJAG_01471","SJAG_04627","SJAG_00438","SJAG_03708","SJAG_03114","SJAG_00412","SJAG_00885","SJAG_02887","SJAG_04849","SJAG_04422","SJAG_07003","SJAG_02105","SJAG_00915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89061,110963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88540,85515,114037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[104336,96149,98317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[104851,85269,90942,89971,97894,99734,115066,103968,115062,101060,115057,111892,99116,88948,99763,103878,89373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[103326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[114017],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[96150,102579,89519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate metabolic process","termid":"GO:0009141"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00412":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside triphosphate anabolism","type":"exact"},{"name":"nucleoside triphosphate biosynthesis","type":"exact"},{"name":"nucleoside triphosphate formation","type":"exact"},{"name":"nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009142","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905706":null}}


id: SO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small non-coding stem-loop RNA present in nematodes and insects, functionally and structurally related to vertebrate Y RNA.","definition_xrefs":["PMID:30666901","PMID:25908866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sbRNA","synonyms":[{"name":"Stem-bulge RNA","type":"exact"},{"name":"stem_bulge_RNA","type":"exact"}],"termid":"SO:0002354"}


id: PBO:0080325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 89 pseudogene","termid":"PBO:0080325"}


id: PBO:0054444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1841","termid":"PBO:0054444"}


id: GO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin E","termid":"GO:0034695"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin E stimulus","termid":"GO:0071380"}


id: PBO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-27","termid":"PBO:0075064"}


id: PBO:0074777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3J","termid":"PBO:0074777"}


id: PBO:0038668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL3 antisense RNA 1","termid":"PBO:0038668"}


id: PBO:0073144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23A antisense RNA 1","termid":"PBO:0073144"}


id: PBO:0048952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 3","termid":"PBO:0048952"}


id: FYPO:0007796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}


id: PBO:0045007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 2","termid":"PBO:0045007"}


id: PBO:0036001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0036001"}


id: FYPO:0005787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a normal (i.e. indistinguishable from wild type) distance from the break site. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PomBase:mah","GO:0000729","PMID:27729451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of double-strand break processing","synonyms":[{"name":"normal spatial extent of DSB processing","type":"exact"},{"name":"normal spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"normal spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0005787"}


id: GO:0010682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of flavonoids.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in flavonoid metabolism (obsolete GO:0010682)","termid":"GO:0010682"}


id: PBO:0081230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYND10 antisense RNA 1","termid":"PBO:0081230"}


id: GO:1904201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iodide transport.","definition_xrefs":["PMID:20392814","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"iodide transport","termid":"GO:0015705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of iodide transport","termid":"GO:1904201"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: GO:0008474
data:
  {"annotated_genes":["SJAG_02056","SJAG_02268","SJAG_03377","SJAG_00774","SJAG_00734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89618,96636,97015,105065,106971],"is_not":false,"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein.","definition_xrefs":["EC:3.1.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"},{"relation_name":"is_a","term_name":"palmitoyl hydrolase activity","termid":"GO:0098599"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647994","Reactome:R-HSA-8933328","RHEA:19233","MetaCyc:3.1.2.22-RXN","Reactome:R-HSA-5690517","Reactome:R-HSA-203613"],"synonyms":[{"name":"palmitoyl-[protein] hydrolase","type":"broad"},{"name":"palmitoyl-protein hydrolase activity","type":"exact"},{"name":"palmitoyl-protein thioesterase activity","type":"exact"},{"name":"palmitoyl-protein thiolesterase activity","type":"exact"}],"termid":"GO:0008474","terms_by_termid":{"GO:0008474":null}}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: GO:0000938
data:
  {"annotated_genes":["SJAG_01645","SJAG_02811","SJAG_04902","SJAG_03963"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91885,92978,93250,105238],"is_not":false,"summary":null,"term":"GO:0000938"}]},"cv_name":"cellular_component","definition":"A quatrefoil tethering complex required for retrograde traffic from the early endosome back to the late Golgi and biogenesis of cytoplasmic vesicles.","definition_xrefs":["PMID:10637310","GOC:rn","GOC:clt","PMID:12077354","PMID:12446664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01645":null,"SJAG_02811":null,"SJAG_03963":null,"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0005794","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GARP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi associated retrograde protein complex","type":"exact"},{"name":"VFT tethering complex","type":"exact"},{"name":"Vps fifty three tethering complex","type":"exact"}],"termid":"GO:0000938","terms_by_termid":{"GO:0000938":null}}


id: PBO:0058490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5684","termid":"PBO:0058490"}


id: PBO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 25","termid":"PBO:0050323"}


id: PBO:0040147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 2","termid":"PBO:0040147"}


id: GO:0106433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O6-methyl-dGTP + H2O = O6-methyl-dGMP + diphosphate + H+.","definition_xrefs":["RHEA:67600","PMID:30304478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"O6-methyl-dGTP hydrolase activity","termid":"GO:0106433"}


id: PBO:0029639
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_TPCK","termid":"PBO:0029639"}


id: GO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = beta-alanine + CO2.","definition_xrefs":["EC:4.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aspartate 1-decarboxylase activity","secondary_identifiers":["MetaCyc:ASPDECARBOX-RXN","RHEA:19497","MetaCyc:PWY-5155"],"synonyms":[{"name":"L-aspartate 1-carboxy-lyase (beta-alanine-forming)","type":"related"},{"name":"L-aspartate 1-carboxy-lyase activity","type":"related"},{"name":"L-aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartic alpha-decarboxylase","type":"broad"}],"termid":"GO:0004068"}


id: PR:Q9URV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A platelet-activating factor acetylhydrolase 2, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.11c","secondary_identifiers":["UniProtKB:Q9URV1"],"synonyms":[{"name":"1-alkyl-2-acetylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAFAH2","type":"exact"}],"termid":"PR:Q9URV1"}


id: PBO:0027484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_G0","termid":"PBO:0027484"}


id: FYPO:0004115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with abnormal size, shape, or structure and a nucleus that is larger than normal.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, abnormal septum morphology","termid":"FYPO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0005447","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, abnormal septum morphology, enlarged nucleus","synonyms":[{"name":"inviable after spore germination, undivided cell, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"inviable after spore germination, without cell division, abnormal septum formation, enlarged nucleus","type":"exact"},{"name":"inviable following spore germination, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"inviable germinated spore, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"lethal after spore germination, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"}],"termid":"FYPO:0004115"}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: PBO:0082938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic class E vacuolar protein sorting (VPS) factor; coordinates protein sorting and deubiquitination in the multivesicular body (MVB) pathway by recruiting Doa4p to endosomes","termid":"PBO:0082938"}


id: FYPO:0005816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal microtubule-based movement","synonyms":[{"name":"normal microtubule-based movement during mitotic cell cycle","type":"related"},{"name":"normal microtubule-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005816"}


id: GO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"beta-ketoadipate pathway","termid":"GO:0042952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, ortho-cleavage","secondary_identifiers":["MetaCyc:CATECHOL-ORTHO-CLEAVAGE-PWY"],"synonyms":[{"name":"catechol breakdown, ortho-cleavage","type":"exact"},{"name":"catechol degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019615"}


id: GO:0019846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause injury to the intestinal mucosa of other living organisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete enterotoxin activity (obsolete GO:0019846)","synonyms":[{"name":"enterotoxin activity","type":"exact"}],"termid":"GO:0019846"}


id: PBO:0085487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Profilin; binds actin, phosphatidylinositol 4,5-bisphosphate, and polyproline regions; involved in cytoskeleton organization; required for normal timing of actin polymerization in response to thermal stress; protein abundance increases in response to DNA replication stress; highly conserved protein; human PFN1 (profilin 1) complements temperature sensitive pfy1 mutants, PFN1 mutations are a rare cause of ALS","termid":"PBO:0085487"}


id: PBO:0091121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase complex subunit Gta3","termid":"PBO:0091121"}


id: PR:Q9P6I5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02351","PANTHER:PTHR23117:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.05","secondary_identifiers":["UniProtKB:Q9P6I5"],"synonyms":[{"name":"GMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GUK1","type":"exact"}],"termid":"PR:Q9P6I5"}


id: PBO:0012289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog","termid":"PBO:0012289"}


id: PBO:0069916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1208, pseudogene","termid":"PBO:0069916"}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: PBO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L25 (predicted)","termid":"PBO:0002794"}


id: GO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of Sertoli cells is acquired and determined.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"Sertoli cell differentiation","termid":"GO:0060008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell fate commitment","termid":"GO:0060010"}


id: GO:1900863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"},{"relation_name":"positively_regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of cordyol C biosynthetic process","synonyms":[{"name":"activation of cordyol C biosynthetic process","type":"narrow"},{"name":"up regulation of cordyol C biosynthetic process","type":"exact"},{"name":"up-regulation of cordyol C biosynthetic process","type":"exact"},{"name":"upregulation of cordyol C biosynthetic process","type":"exact"}],"termid":"GO:1900863"}


id: PBO:0087041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1A; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1A has a paralog, RPL1B, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087041"}


id: MOD:00096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamic acid 1-amide.","definition_xrefs":["RESID:AA0087","PubMed:14550575","PubMed:1093875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-pentanediamic acid","type":"exact"},{"name":"1-amidated L-glutamic acid","type":"exact"},{"name":"4,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"GluN","type":"exact"},{"name":"L-glutamic acid 1-amide","type":"exact"},{"name":"MOD_RES Glutamic acid 1-amide","type":"exact"},{"name":"isoglutamine","type":"exact"}],"termid":"MOD:00096"}


id: PBO:0025428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and mieotic spindle pole body protein Spo15","termid":"PBO:0025428"}


id: SO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site of variable direct repeats of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","PMID:19917671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic_acid_responsive_element","synonyms":[{"name":"RARE","type":"exact"},{"name":"retinoic acid responsive element","type":"exact"}],"termid":"SO:0001653"}


id: GO:0010639
data:
  {"annotated_genes":["SJAG_03681","SJAG_04999","SJAG_01993","SJAG_01458","SJAG_01825","SJAG_03072","SJAG_03126","SJAG_05978","SJAG_00823","SJAG_03327","SJAG_01716","SJAG_04699","SJAG_01894","SJAG_03438","SJAG_04638","SJAG_00266","SJAG_00460","SJAG_03353","SJAG_02169","SJAG_04287","SJAG_03455","SJAG_00364","SJAG_02451","SJAG_04982","SJAG_01082","SJAG_04126","SJAG_00855","SJAG_03591","SJAG_01943","SJAG_02336","SJAG_04884","SJAG_04203","SJAG_00304","SJAG_00369","SJAG_03048","SJAG_01837","SJAG_01680","SJAG_02700","SJAG_01679","SJAG_04259","SJAG_01330","SJAG_01297","SJAG_04703","SJAG_03529","SJAG_00883","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114648,88427,110374,84416,94984,88611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[108017,111948,109845,99971,103296,110323,104318,86847,95668],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110549,102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[85202,110313,112111,76907,102678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[111597,86849,105974,109849,95517,112720,97875,102375,110552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[113962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[99551,112354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[98124,102509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[98449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[102316,111382,87841,102411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[102376,111598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90300],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[102643,103471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[97526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061192"},{"annotations":[109850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112724],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90301],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[93824,110377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of an organelle.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00279":null,"SJAG_00304":null,"SJAG_00364":null,"SJAG_00369":null,"SJAG_00460":null,"SJAG_00823":null,"SJAG_00855":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01458":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_02700":null,"SJAG_03048":null,"SJAG_03072":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03455":null,"SJAG_03529":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04203":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04638":null,"SJAG_04699":null,"SJAG_04703":null,"SJAG_04884":null,"SJAG_04982":null,"SJAG_04999":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organelle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of organelle organisation","type":"exact"},{"name":"negative regulation of organelle organization and biogenesis","type":"related"}],"termid":"GO:0010639","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0034316":null,"GO:0042989":null,"GO:0045128":null,"GO:0045841":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0061192":null,"GO:0090258":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905412":null,"GO:1905560":null,"GO:2000816":null}}


id: FYPO:0000905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein ubiquitination during vegetative growth","synonyms":[{"name":"abnormal protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"abnormal protein ubiquitinylation during vegetative growth","type":"related"},{"name":"abnormal protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000905"}


id: GO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:11498577","PMID:1568251","GOC:mr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"dosage compensation by hyperactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0009047"}


id: PBO:0074532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA F","termid":"PBO:0074532"}


id: GO:0021842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons away from the signal during migration from the subpallium to the cortex.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"negative chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021842"}


id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","PMID:15157725","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: PBO:0055872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 pseudogene 1","termid":"PBO:0055872"}


id: GO:1990596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 4 of the histone.","definition_xrefs":["PMID:20299449"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 deacetylation (obsolete GO:1990596)","termid":"GO:1990596"}


id: PBO:0079937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 2, c-fos interacting","termid":"PBO:0079937"}


id: PBO:0111315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PRR repeat protein, implicated in mitochondrial gene expression","termid":"PBO:0111315"}


id: SO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short open reading frame that is found in the 5' untranslated region of an mRNA and plays a role in translational regulation.","definition_xrefs":["PMID:16153175","PMID:12890013","POMBASE:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ORF","termid":"SO:0000236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uORF","secondary_identifiers":["PMID:26684391"],"synonyms":[{"name":"regulatory uORF","type":"exact"},{"name":"upstream ORF","type":"exact"}],"termid":"SO:0002027"}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: GO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyadipate + NAD+ = 2-oxoadipate + H+ + NADH.","definition_xrefs":["EC:1.1.1.172","RHEA:14793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-oxoadipate reductase activity","secondary_identifiers":["MetaCyc:2-OXOADIPATE-REDUCTASE-RXN","KEGG_REACTION:R01932"],"synonyms":[{"name":"2-hydroxyadipate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketoadipate reductase activity","type":"related"},{"name":"alpha-ketoadipate reductase activity","type":"related"}],"termid":"GO:0047550"}


id: GO:0044215
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism (obsolete GO:0044215)","termid":"GO:0044215"}


id: GO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein modification process in which a polypeptide is added to a nascent polypeptide cotranslationally by trans-translation.","definition_xrefs":["GOC:jh2","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"co-translational protein modification","termid":"GO:0043686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trans-translation-dependent protein tagging","synonyms":[{"name":"co-translational protein tagging","type":"exact"},{"name":"cotranslational protein tagging","type":"exact"},{"name":"protein modification by trans-translation","type":"exact"}],"termid":"GO:0070930"}


id: GO:0019657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Glycolytic fermentation resulting in the catabolism of glucose to propionate, yielding energy in the form of ATP; an alternative to the acrylate pathway to produce propionate.","definition_xrefs":["MetaCyc:P108-PWY","GOC:dph","GOC:nr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"pyruvate catabolic process","termid":"GO:0042867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0044248","GO:0006091"],"is_obsolete":false,"name":"glycolytic fermentation to propionate","synonyms":[{"name":"succinate-propionate fermentation","type":"exact"}],"termid":"GO:0019657"}


id: PBO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2B","termid":"PBO:0047603"}


id: GO:0019794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving any amino acid not found, or rarely found, in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nonprotein amino acid metabolic process (obsolete GO:0019794)","synonyms":[{"name":"nonprotein amino acid metabolic process","type":"exact"},{"name":"nonprotein amino acid metabolism","type":"exact"}],"termid":"GO:0019794"}


id: PBO:0087349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between spindle pole bodies in dividing cells; localizes to poles and microtubules of spindle during anaphase and contributes to spindle stability; involved in Glc7p localization and regulation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087349"}


id: GO:0140270
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88590],"is_not":false,"summary":null,"term":"GO:0140270"}]},"cv_name":"biological_process","definition":"The directed movement of gluconate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate transmembrane transport","termid":"GO:0035429"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"gluconate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140270","terms_by_termid":{"GO:0140270":null}}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein + H+.","definition_xrefs":["RHEA:52316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["MetaCyc:2.4.99.6-RXN","EC:2.4.3.6"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"related"}],"termid":"GO:0008118"}


id: GO:0014868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which cross bridges are broken and reformed during filament sliding as part of the regulation of the velocity of shortening in skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cross bridge cycling involved in regulation of the velocity of shortening in skeletal muscle contraction","termid":"GO:0014868"}


id: PATO:0015001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence due to a degenerative process.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PATO:0000462"},{"relation_name":"is_a","term_name":"degenerate","termid":"PATO:0000639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absence due to degeneration","termid":"PATO:0015001"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: PBO:0085577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 2'-O-methylation of C32 of substrate tRNAs; interacts with 2'-O-ribose methyltransferase Trm7p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; non-essential gene; yeast null mutant can be functionally complemented by human THADA, mutations in which have been implicated in epithelial thyroid adenomas, type 2 diabetes, and polycystic ovary syndrome (PCOS)","termid":"PBO:0085577"}


id: PR:000027728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:15184401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 1","synonyms":[{"name":"Myosin type II heavy chain 1","type":"exact"},{"name":"myo2","type":"exact"}],"termid":"PR:000027728"}


id: MOD:01226
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to an L-fluorotryptophan.","definition_xrefs":["PubMed:8069568","Unimod:127#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-tryptophan","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"}],"termid":"MOD:01226"}


id: GO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of the host TBK1-IKBKE-DDX3 complex.","definition_xrefs":["VZ:719"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host TBK1-IKBKE-DDX3 complex activity (obsolete GO:0039659)","synonyms":[{"name":"inhibition of host TBK1-IKBKE-DDX3 complex by virus","type":"exact"},{"name":"suppression by virus of host TBK1-IKKE-DDX3 complex activity","type":"exact"}],"termid":"GO:0039659"}


id: PBO:0074721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80A","termid":"PBO:0074721"}


id: PBO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPP38 divergent transcript","termid":"PBO:0071793"}


id: PBO:0082369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) transcription factor of the myc-family; activates transcription cooperatively with Pho2p in response to phosphate limitation; binding to 'CACGTG' motif is regulated by chromatin restriction, competitive binding of Cbf1p to the same DNA binding motif and cooperation with Pho2p; function is regulated by phosphorylation at multiple sites and by phosphate availability","termid":"PBO:0082369"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: GO:0015533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: shikimate(out) + H+(out) = shikimate(in) + H+(in).","definition_xrefs":["TC:2.A.1.6.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"},{"relation_name":"is_a","term_name":"shikimate transmembrane transporter activity","termid":"GO:0015530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"shikimate:proton symporter activity","synonyms":[{"name":"shikimate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015533"}


id: GO:0098557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the smooth endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum membrane","termid":"GO:0030868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"cytoplasmic side of smooth endoplasmic reticulum membrane","termid":"GO:0098557"}


id: PBO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX59 antisense RNA 1","termid":"PBO:0044777"}


id: PBO:0075962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 4","termid":"PBO:0075962"}


id: PBO:0083491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDL185W; identified by homology with hemiascomycetous yeast species","termid":"PBO:0083491"}


id: PBO:0028994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_proline_import","termid":"PBO:0028994"}


id: PBO:0066599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 2","termid":"PBO:0066599"}


id: PBO:0031885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1 (predicted)","termid":"PBO:0031885"}


id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: PBO:0054570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1972","termid":"PBO:0054570"}


id: PBO:0027550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomere","termid":"PBO:0027550"}


id: PBO:0040371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PB pseudogene 8","termid":"PBO:0040371"}


id: GO:0030518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a steroid binding to an intracellular steroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone mediated signaling pathway","termid":"GO:0043401"},{"relation_name":"is_a","term_name":"nuclear receptor signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"steroid hormone receptor signaling pathway","type":"broad"},{"name":"steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0030518"}


id: PBO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 2","termid":"PBO:0071461"}


id: GO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell aging (obsolete GO:0090343)","termid":"GO:0090343"}


id: PBO:0044667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 and DDB1 associated 1","termid":"PBO:0044667"}


id: GO:0006943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of chemical energy into mechanical work (as in the contraction of a muscle).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete chemi-mechanical coupling (obsolete GO:0006943)","synonyms":[{"name":"chemi-mechanical coupling","type":"exact"},{"name":"mechanochemical coupling","type":"exact"}],"termid":"GO:0006943"}


id: GO:1904944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","PMID:23575307","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber formation","termid":"GO:1901212"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle formation","termid":"GO:1904942"},{"relation_name":"positively_regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac ventricle formation","synonyms":[{"name":"activation of cardiac ventricle formation","type":"narrow"},{"name":"up regulation of cardiac ventricle formation","type":"exact"},{"name":"up-regulation of cardiac ventricle formation","type":"exact"},{"name":"upregulation of cardiac ventricle formation","type":"exact"}],"termid":"GO:1904944"}


id: GO:1902640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propan-2-ol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:mengo_curators","PMID:16346237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propan-2-ol metabolic process","termid":"GO:1902639"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propan-2-ol biosynthetic process","synonyms":[{"name":"Isopropanol biosynthetic process","type":"exact"},{"name":"Isopropyl alcohol biosynthetic process","type":"exact"},{"name":"propan-2-ol anabolism","type":"exact"},{"name":"propan-2-ol biosynthesis","type":"exact"},{"name":"propan-2-ol formation","type":"exact"},{"name":"propan-2-ol synthesis","type":"exact"}],"termid":"GO:1902640"}


id: GO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the outgrowing Malpighian tubule guided by specific chemical cues/signals. Movement may be towards a guidance cue (positive chemotaxis) or away from it (negative chemotaxis). Guidance contributes to the final positioning of the tubule.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"cell rearrangement involved in Malpighian tubule morphogenesis","termid":"GO:0061334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis involved in Malpighian tubule morphogenesis","termid":"GO:0061352"}


id: PBO:0089886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein, RNA polymerase I termination factor Eta2","termid":"PBO:0089886"}


id: FYPO:0001525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-thialysine. Cells stop growing (and may die) at a concentration of L-thialysine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to L-thialysine","synonyms":[{"name":"hypersensitive to L-thialysine","type":"exact"},{"name":"sensitive to L-thialysine during mitotic cell cycle","type":"related"},{"name":"sensitive to L-thialysine during vegetative growth","type":"exact"},{"name":"sensitive to thialysine","type":"broad"}],"termid":"FYPO:0001525"}


id: GO:0052881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-hydroxyphenyl)acetate + FADH(2) + O2 = 3,4-dihydroxyphenylacetate + FAD + H+ + H2O.","definition_xrefs":["RHEA:30595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxyphenylacetate 3-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0301","MetaCyc:RXN-8505","EC:1.14.14.9"],"synonyms":[{"name":"4 HPA 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxyphenylacetate,FADH:oxygen oxidoreductase (3-hydroxylating) activity","type":"exact"},{"name":"4-hydroxyphenylacetic acid-3-hydroxylase activity","type":"broad"},{"name":"p-hydroxyphenylacetate 3-hydroxylase (FAD) activity","type":"related"},{"name":"p-hydroxyphenylacetate 3-hydroxylase activity","type":"broad"},{"name":"p-hydroxyphenylacetate hydroxylase (FAD) activity","type":"related"},{"name":"p-hydroxyphenylacetate hydroxylase activity","type":"broad"}],"termid":"GO:0052881"}


id: GO:0010777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic mismatch repair","termid":"GO:0000710"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0006310","GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic mismatch repair involved in reciprocal meiotic recombination","termid":"GO:0010777"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["PMID:11387982","UniPathway:UPA00802","MetaCyc:PWY-5943","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: PBO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial dysautonomia","termid":"PBO:0003364"}


id: PBO:0055791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LOXL1 antisense RNA 1","termid":"PBO:0055791"}


id: PBO:0058578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6515","termid":"PBO:0058578"}


id: GO:0032869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to insulin","termid":"GO:0032868"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to insulin stimulus","termid":"GO:0032869"}


id: GO:2000943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of amylopectin metabolic process","termid":"GO:2000942"},{"relation_name":"negatively_regulates","term_name":"amylopectin metabolic process","termid":"GO:2000896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amylopectin metabolic process","synonyms":[{"name":"negative regulation of Amylopectin metabolism","type":"exact"}],"termid":"GO:2000943"}


id: GO:0099042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The first step in clathrin-dependent endocytosis: invagination of the plasma membrane to form a pit.","definition_xrefs":["PMID:21779028","GOC:dos","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleation of clathrin-coated pit (obsolete GO:0099042)","termid":"GO:0099042"}


id: GO:0102205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + cholesterol = UDP + cholesteryl beta-D-glucoside + H+.","definition_xrefs":["GOC:pz","RHEA:61848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cholesterol alpha-glucosyltransferase activity","secondary_identifiers":["GO:0051505","EC:2.4.1.173","MetaCyc:RXN-12127"],"synonyms":[{"name":"cholesterol UDP-glucosyltransferase activity","type":"related"},{"name":"cholesterol allpha-glucosyltransferase activity","type":"exact"}],"termid":"GO:0102205"}


id: PBO:0051050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-2","termid":"PBO:0051050"}


id: GO:1905961
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of protein-cysteine S-palmitoyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:20851885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase complex","synonyms":[{"name":"Palmitoyltransferase ERF2-SHR5 complex","type":"narrow"},{"name":"Palmitoyltransferase ERF2/SHR5 complex","type":"narrow"}],"termid":"GO:1905961"}


id: PBO:0055523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2957","termid":"PBO:0055523"}


id: PBO:0052094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KBTBD11 overlapping transcript 1","termid":"PBO:0052094"}


id: GO:0006209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"cytosine metabolic process","termid":"GO:0019858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cytosine catabolic process","synonyms":[{"name":"cytosine breakdown","type":"exact"},{"name":"cytosine catabolism","type":"exact"},{"name":"cytosine degradation","type":"exact"}],"termid":"GO:0006209"}


id: GO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of a symbiont within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host (obsolete GO:0044133)","termid":"GO:0044133"}


id: FYPO:0005132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to an enzymes that degrades cell wall polysaccharides.","definition_xrefs":["PomBase:mah","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spores sensitive to cell wall-degrading enzymes","synonyms":[{"name":"spores sensitive to glusulase","type":"narrow"}],"termid":"FYPO:0005132"}


id: GO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the ureter. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.","definition_xrefs":["MA:0000378","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle contraction","termid":"GO:0014849"}


id: PBO:0075342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related receptor 1","termid":"PBO:0075342"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: PBO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036148"}


id: PATO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000452 relative pilosity value (obsolete PATO:0000452)","termid":"PATO:0000452"}


id: PR:P78871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein rst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.02","synonyms":[{"name":"Spom972h-rst2","type":"exact"}],"termid":"PR:P78871"}


id: GO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + acetoin = 1-deoxy-D-altro-heptulose 7-phosphate + acetaldehyde.","definition_xrefs":["RHEA:21504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016744","GO:0016740"],"is_obsolete":false,"name":"acetoin-ribose-5-phosphate transaldolase activity","secondary_identifiers":["EC:2.2.1.4","KEGG_REACTION:R02345","MetaCyc:2.2.1.4-RXN"],"synonyms":[{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthase activity","type":"related"},{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthetase activity","type":"related"},{"name":"3-hydroxybutan-2-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"},{"name":"3-hydroxybutan-3-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"}],"termid":"GO:0047156"}


id: PBO:0072895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C5-desaturase","termid":"PBO:0072895"}


id: PBO:0065696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 1","termid":"PBO:0065696"}


id: GO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete o-xylene biosynthetic process (obsolete GO:0046242)","synonyms":[{"name":"o-xylene anabolism","type":"exact"},{"name":"o-xylene biosynthesis","type":"exact"},{"name":"o-xylene biosynthetic process","type":"exact"},{"name":"o-xylene formation","type":"exact"},{"name":"o-xylene synthesis","type":"exact"},{"name":"ortho-xylene biosynthesis","type":"exact"},{"name":"ortho-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046242"}


id: GO:0110029
data:
  {"annotated_genes":["SJAG_03327","SJAG_01330","SJAG_04259","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102373,110549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[109850],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of meiosis I, a cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"negatively_regulates","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiosis I","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110029","terms_by_termid":{"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3 regulatory factor","termid":"PBO:0043880"}


id: PBO:0083045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyhypusine hydroxylase; HEAT-repeat containing metalloenzyme that catalyzes hypusine formation; binds to and is required for the modification of Hyp2p (eIF5A); complements S. pombe mmd1 mutants defective in mitochondrial positioning; protein abundance increases in response to DNA replication stress","termid":"PBO:0083045"}


id: PBO:0005712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23 (predicted)","termid":"PBO:0005712"}


id: PBO:0053262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF receptor subunit alpha","termid":"PBO:0053262"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["PMID:17765709","NIF_Subcellular:nlx_subcell_100312","PMID:20554881","PMID:24336151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: GO:1905343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cohesin unloading.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"},{"relation_name":"regulates","term_name":"cohesin unloading","termid":"GO:0061774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cohesin unloading","termid":"GO:1905343"}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: PBO:0090329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10, low frequency splice site, possible frameshifted","termid":"PBO:0090329"}


id: PBO:0065009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 13","termid":"PBO:0065009"}


id: GO:1905330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GOC:bhm","PMID:25745997","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of morphogenesis of an epithelium","synonyms":[{"name":"regulation of epithelium morphogenesis","type":"exact"}],"termid":"GO:1905330"}


id: GO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an myocardial progenitor cell that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of myocardial progenitor cell apical/basal polarity","synonyms":[{"name":"myocardial progenitor epithelial polarization","type":"exact"}],"termid":"GO:0003316"}


id: PBO:0027004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_meiotic_cell_cycle","termid":"PBO:0027004"}


id: GO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine production","secondary_identifiers":["GO:0050710","GO:0042036"],"synonyms":[{"name":"down regulation of cytokine biosynthetic process","type":"exact"},{"name":"down regulation of cytokine production","type":"exact"},{"name":"down-regulation of cytokine biosynthetic process","type":"exact"},{"name":"down-regulation of cytokine production","type":"exact"},{"name":"downregulation of cytokine biosynthetic process","type":"exact"},{"name":"downregulation of cytokine production","type":"exact"},{"name":"inhibition of cytokine biosynthetic process","type":"narrow"},{"name":"inhibition of cytokine production","type":"narrow"},{"name":"negative regulation of cytokine anabolism","type":"exact"},{"name":"negative regulation of cytokine biosynthesis","type":"exact"},{"name":"negative regulation of cytokine biosynthetic process","type":"narrow"},{"name":"negative regulation of cytokine formation","type":"exact"},{"name":"negative regulation of cytokine secretion","type":"narrow"},{"name":"negative regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001818"}


id: PBO:0027362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_histone_H2A_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027362"}


id: PBO:0036097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036097"}


id: GO:0010431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in seed development that occurs after embryogenesis by which a quiescent state is established in a seed. Seed maturation is characterized by storage compound accumulation, acquisition of desiccation tolerance, growth arrest and the entry into a dormancy period of variable length that is broken upon germination.","definition_xrefs":["PMID:16096971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed maturation","termid":"GO:0010431"}


id: PBO:0080760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis","termid":"PBO:0080760"}


id: GO:0021823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neurons interact with each other to promote migration along a tangential plane.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","PMID:12626695","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-cell interactions","synonyms":[{"name":"chain migration","type":"related"}],"termid":"GO:0021823"}


id: PBO:0053181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens epithelial protein","termid":"PBO:0053181"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","GOC:jid","GOC:ef","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: PBO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_thin_vegetative_cell","termid":"PBO:0030020"}


id: GO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.","definition_xrefs":["ISBN:0198506732","PMID:6405378","GOC:mtg_muscle","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"costamere","secondary_identifiers":["Wikipedia:Costamere"],"termid":"GO:0043034"}


id: PBO:0083608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps essential RRN5 gene which encodes a member of the UAF transcription factor involved in transcription of rDNA by RNA polymerase I","termid":"PBO:0083608"}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: PBO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulates","termid":"PBO:0034157"}


id: PR:O13802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ebp2 gene.","definition_xrefs":["UniProtKB:O13802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein ebp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.05","synonyms":[{"name":"Spom972h-ebp2","type":"exact"}],"termid":"PR:O13802"}


id: GO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah","CL:0000542","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration","termid":"GO:0072676"}


id: PBO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2480","termid":"PBO:0055064"}


id: PBO:0041994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC39 antisense RNA 1","termid":"PBO:0041994"}


id: GO:1905649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of shell calcification.","definition_xrefs":["PMID:14648763","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"negatively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of shell calcification","synonyms":[{"name":"down regulation of shell calcification","type":"exact"},{"name":"down-regulation of shell calcification","type":"exact"},{"name":"downregulation of shell calcification","type":"exact"},{"name":"inhibition of shell calcification","type":"narrow"}],"termid":"GO:1905649"}


id: PBO:0028895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_antisense_primary_transcript_splicing","termid":"PBO:0028895"}


id: PBO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40 (predicted)","termid":"PBO:0012028"}


id: GO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SUMO-dependent protein catabolic process (obsolete GO:0019940)","synonyms":[{"name":"SUMO-dependent protein breakdown","type":"exact"},{"name":"SUMO-dependent protein catabolic process","type":"exact"},{"name":"SUMO-dependent protein catabolism","type":"exact"},{"name":"SUMO-dependent protein degradation","type":"exact"}],"termid":"GO:0019940"}


id: PBO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 25","termid":"PBO:0071023"}


id: GO:0048612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the post-embryonic phase, whose specific outcome is the progression of the ectodermal gut over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic ectodermal digestive tract development","synonyms":[{"name":"post-embryonic ectodermal gut development","type":"related"}],"termid":"GO:0048612"}


id: FYPO:0004001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular sulfur level","termid":"FYPO:0001544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glutathione level","synonyms":[{"name":"normal cellular GSH level","type":"exact"},{"name":"normal cellular L-gamma-glutamyl-L-cysteinylglycine level","type":"exact"},{"name":"normal cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutathione level during vegetative growth","type":"exact"},{"name":"normal cellular reduced glutathione level","type":"exact"},{"name":"normal glutathione accumulation","type":"related"}],"termid":"FYPO:0004001"}


id: PBO:0062395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 16 pseudogene","termid":"PBO:0062395"}


id: PBO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 6","termid":"PBO:0048744"}


id: PBO:0092034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit 9","termid":"PBO:0092034"}


id: MOD:01642
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine removal","termid":"MOD:01642"}


id: PR:O14111
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd3 gene.","definition_xrefs":["UniProtKB:O14111","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.15","synonyms":[{"name":"Spom972h-psd3","type":"exact"}],"termid":"PR:O14111"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: GO:0072567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 2 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 2 production","synonyms":[{"name":"CXCL2 production","type":"exact"},{"name":"MIP-2 production","type":"exact"},{"name":"MIP2 production","type":"exact"},{"name":"SCYB2 production","type":"exact"}],"termid":"GO:0072567"}


id: GO:1900716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of violaceol II biosynthetic process","synonyms":[{"name":"regulation of violaceol II anabolism","type":"exact"},{"name":"regulation of violaceol II biosynthesis","type":"exact"},{"name":"regulation of violaceol II formation","type":"exact"},{"name":"regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900716"}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["GOC:rph","PMID:10630641"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: PBO:0062031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily S member 2","termid":"PBO:0062031"}


id: PBO:0077458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184A","termid":"PBO:0077458"}


id: PBO:0041453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 62","termid":"PBO:0041453"}


id: GO:0102917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-reticulinium(1+) + S-adenosyl-L-methionine = H+ + laudanine(1+) + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:10444","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-reticuline 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8700","EC:2.1.1.291"],"termid":"GO:0102917"}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: PBO:0076871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 19","termid":"PBO:0076871"}


id: PBO:0063591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEX5L antisense RNA 1","termid":"PBO:0063591"}


id: SO:0000390
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of telomerase, a reverse transcriptase that synthesizes telomeric DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Telomerase_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:telomerase_RNA","type":"exact"},{"name":"telomerase RNA","type":"exact"}],"termid":"SO:0000390"}


id: PBO:0075609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speckle type BTB/POZ protein","termid":"PBO:0075609"}


id: GO:1905306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl","PMID:16151019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"is_a","term_name":"regulation of cardiac myofibril assembly","termid":"GO:1905304"},{"relation_name":"positively_regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac myofibril assembly","synonyms":[{"name":"activation of cardiac myofibril assembly","type":"narrow"},{"name":"activation of cardiac myofibril development","type":"narrow"},{"name":"activation of cardiac myofibril morphogenesis","type":"narrow"},{"name":"activation of heart myofibril assembly","type":"related"},{"name":"positive regulation of cardiac myofibril development","type":"exact"},{"name":"positive regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"positive regulation of heart myofibril assembly","type":"related"},{"name":"up regulation of cardiac myofibril assembly","type":"exact"},{"name":"up regulation of cardiac myofibril development","type":"exact"},{"name":"up regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up regulation of heart myofibril assembly","type":"related"},{"name":"up-regulation of cardiac myofibril assembly","type":"exact"},{"name":"up-regulation of cardiac myofibril development","type":"exact"},{"name":"up-regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"up-regulation of heart myofibril assembly","type":"related"},{"name":"upregulation of cardiac myofibril assembly","type":"exact"},{"name":"upregulation of cardiac myofibril development","type":"exact"},{"name":"upregulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"upregulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905306"}


id: PBO:0036380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin Aly1 related Aly1","termid":"PBO:0036380"}


id: PR:P05733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3702 gene.","definition_xrefs":["UniProtKB:P05733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.05c","synonyms":[{"name":"L37-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3702","type":"exact"},{"name":"YL27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05733"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:jl","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: FYPO:0004295
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[115123],"is_not":false,"summary":null,"term":"FYPO:0004295"},{"annotations":[115287,115288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype characterized by the presence of more than one septum in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"septated cell","termid":"FYPO:0004296"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00118","SJAG_01143"],"name":"multiseptate cell","references_by_uniquename":{"PMID:25866389":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_00118","SJAG_04551"],"single_locus_genotype_uniquenames":["mid1delta","pmk1delta","mid2delta"],"termid":"FYPO:0004295","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000207":null,"FYPO:0000118":null,"FYPO:0004295":null,"FYPO_EXT:0000002":null}}


id: GO:1990594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-altrarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["PMID:17649980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-altrarate dehydratase activity","secondary_identifiers":["RHEA:44028"],"synonyms":[{"name":"L-talarate dehydratase activity","type":"exact"}],"termid":"GO:1990594"}


id: PBO:0067942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 244","termid":"PBO:0067942"}


id: SO:1000070
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the way in which the primary transcriptional product is processed to form the mature transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000070 sequence_variant_affecting_transcript_processing (obsolete SO:1000070)","synonyms":[{"name":"mutation affecting transcript processing","type":"related"},{"name":"sequence variant affecting transcript processing","type":"exact"}],"termid":"SO:1000070"}


id: PBO:0087774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit; disrupts silencing when overproduced; mutant has increased aneuploidy tolerance; essential gene","termid":"PBO:0087774"}


id: MOD:00515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:1694179","RESID:AA0151#var","Unimod:147","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(1)","type":"related"},{"name":"HexNAc2dHex1","type":"related"}],"termid":"MOD:00515"}


id: PBO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor substrate 4","termid":"PBO:0051842"}


id: GO:0051651
data:
  {"annotated_genes":["SJAG_04221","SJAG_03850","SJAG_00368","SJAG_00053","SJAG_01017","SJAG_01738","SJAG_01001","SJAG_03170","SJAG_00321","SJAG_01993","SJAG_01116","SJAG_00030","SJAG_04867","SJAG_00661","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"},{"annotations":[100447,86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[106926,90127,96252,100711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[89482],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[104730],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[110377,93824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[103091,111253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"cellular localization","termid":"GO:0051641"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00321":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01738":null,"SJAG_01993":null,"SJAG_03170":null,"SJAG_03850":null,"SJAG_04221":null,"SJAG_04867":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of location in cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular retention","type":"narrow"},{"name":"cellular sequestering","type":"narrow"},{"name":"cellular storage","type":"narrow"},{"name":"intracellular retention","type":"narrow"},{"name":"intracellular sequestering","type":"narrow"},{"name":"intracellular storage","type":"narrow"},{"name":"maintenance of cellular localization","type":"related"},{"name":"maintenance of intracellular localization","type":"narrow"},{"name":"maintenance of localization in cell","type":"related"},{"name":"maintenance of localization within cell","type":"narrow"},{"name":"retention within cell","type":"narrow"},{"name":"sequestering within cell","type":"narrow"},{"name":"storage within cell","type":"narrow"}],"termid":"GO:0051651","terms_by_termid":{"GO:0006621":null,"GO:0006880":null,"GO:0032065":null,"GO:0042989":null,"GO:0051209":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:1990854":null}}


id: PBO:0026957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_ahead_of_moving_spindle_pole_body","termid":"PBO:0026957"}


id: GO:0008755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the polymerization of o-antigen chains. O-antigens are tetra- and pentasaccharide repeat units of the cell walls of Gram-negative bacteria and are a component of lipopolysaccharide.","definition_xrefs":["GOC:jl","PMID:12045108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O antigen polymerase activity","synonyms":[{"name":"O-antigen polymerase activity","type":"exact"}],"termid":"GO:0008755"}


id: FYPO:0001556
data:
  {"alleles_by_uniquename":{"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115554,115555,115558,115562,115567,115570],"is_not":false,"summary":null,"term":"FYPO:0001556"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:22156749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"excess nuclear envelope present","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03940","SJAG_01906"],"single_locus_genotype_uniquenames":["ned1delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"excess nuclear envelope present during mitotic cell cycle","type":"related"},{"name":"excess nuclear envelope present during vegetative growth","type":"exact"},{"name":"increased nuclear envelope proliferation","type":"related"},{"name":"nuclear envelope present in greater amount","type":"exact"}],"termid":"FYPO:0001556","terms_by_termid":{"FYPO:0001556":null,"FYPO_EXT:0000001":null}}


id: PBO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0035969"}


id: GO:0032163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["GOC:krc","PMID:16151244","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin band","termid":"GO:0032163"}


id: PR:P50527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase shk1/pak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.14c","synonyms":[{"name":"Spom972h-shk1","type":"exact"}],"termid":"PR:P50527"}


id: SO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of insertion where the inserted sequence is a mobile element.","definition_xrefs":["EBI:dvga"],"direct_ancestors":[{"relation_name":"contains","term_name":"mobile_genetic_element","termid":"SO:0001037"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_element_insertion","synonyms":[{"name":"mobile element insertion","type":"exact"}],"termid":"SO:0001837"}


id: PBO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 4","termid":"PBO:0042446"}


id: GO:0052642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysophosphatidic acid + H2O = phosphate + monoacylglycerol.","definition_xrefs":["PMID:7966317","PMID:20045079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lysophosphatidic acid phosphatase activity","secondary_identifiers":["EC:3.1.3.106","MetaCyc:RXNQT-4375","Reactome:R-HSA-8878654","RHEA:33155"],"synonyms":[{"name":"1-acyl-sn-glycerol 3-phosphatase activity","type":"exact"},{"name":"2-lysophosphatidate phosphatase activity","type":"exact"},{"name":"LPA phosphatase activity","type":"exact"},{"name":"lysophosphatidate phosphatase activity","type":"exact"}],"termid":"GO:0052642"}


id: MOD:00954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues with a covalent bond and the loss of water.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues with loss of water","termid":"MOD:00954"}


id: PBO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_overlaps","termid":"PBO:0034141"}


id: PBO:0034545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cohesin_unloading","termid":"PBO:0034545"}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: PBO:0085704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity","termid":"PBO:0085704"}


id: PBO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 2","termid":"PBO:0044002"}


id: PBO:0032733
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(10)","termid":"PBO:0032733"}


id: GO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of imaginal disc-derived wing vein specification.","definition_xrefs":["GOC:ha","PMID:11861482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"imaginal disc-derived wing vein specification","termid":"GO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing vein specification","termid":"GO:0110107"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: GO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of salicylic acid.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in salicylic acid metabolism (obsolete GO:0010679)","termid":"GO:0010679"}


id: GO:0004049
data:
  {"annotated_genes":["SJAG_02505","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99579,110711],"is_not":false,"summary":null,"term":"GO:0004049"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate + L-glutamine = anthranilate + pyruvate + L-glutamate.","definition_xrefs":["EC:4.1.3.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anthranilate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21732","MetaCyc:ANTHRANSYN-RXN"],"synonyms":[{"name":"anthranilate synthetase activity","type":"related"},{"name":"chorismate pyruvate-lyase (amino-accepting) activity","type":"related"}],"termid":"GO:0004049","terms_by_termid":{"GO:0004049":null}}


id: GO:0015440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + peptide(in) = ADP + phosphate + peptide(out). Peptides exported include alpha-hemolysin, cyclolysin, colicin V and siderophores from Gram-negative bacteria, and bacteriocin, subtilin, competence factor and pediocin from Gram-positive bacteria.","definition_xrefs":["EC:7.4.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type peptide transporter activity","synonyms":[{"name":"ATP-dependent peptide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled peptide transmembrane transporter activity","type":"related"},{"name":"peptide ABC transporter","type":"exact"},{"name":"peptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015440"}


id: GO:0009098
data:
  {"annotated_genes":["SJAG_06635","SJAG_03243","SJAG_04098","SJAG_03562","SJAG_02841","SJAG_04149","SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86810,96903,99375,102240,106140,106500,109313],"is_not":false,"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-leucine metabolic process","termid":"GO:0006551"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-leucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LEUSYN-PWY"],"synonyms":[{"name":"L-leucine anabolism","type":"exact"},{"name":"L-leucine biosynthesis","type":"exact"},{"name":"L-leucine formation","type":"exact"},{"name":"L-leucine synthesis","type":"exact"},{"name":"leucine biosynthetic process","type":"broad"}],"termid":"GO:0009098","terms_by_termid":{"GO:0009098":null}}


id: PBO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 2","termid":"PBO:0045772"}


id: PBO:0049982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 3","termid":"PBO:0049982"}


id: PBO:0056120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 7","termid":"PBO:0056120"}


id: PBO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 17 pseudogene","termid":"PBO:0070103"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: GO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["GOC:mah","PMID:17204561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrrolysine metabolic process","synonyms":[{"name":"pyrrolysine metabolism","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct metabolic process","type":"exact"}],"termid":"GO:0071525"}


id: GO:0016438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + queuosine34 in tRNA(Asp) = GDP + H+ + O-4''-alpha-D-mannosylqueuosine34 in tRNA(Asp).","definition_xrefs":["RHEA:12885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0140101","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA-queuosine(34) beta-mannosyltransferase activity","secondary_identifiers":["EC:2.4.1.110","MetaCyc:2.4.1.110-RXN"],"synonyms":[{"name":"GDP-mannose:tRNAAsp-queuosine O-5''-beta-D-mannosyltransferase activity","type":"related"},{"name":"tRNA-queuosine beta-mannosyltransferase activity","type":"broad"}],"termid":"GO:0016438"}


id: FYPO:0005672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to nucleus during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during mitotic M phase","type":"related"},{"name":"decreased protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus during mitosis","type":"exact"}],"termid":"FYPO:0005672"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PMID:33888556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: GO:0033754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine. The product of the reaction depends on the substrate; D-tryptophan produces N-formyl-D-kynurenine, and L-tryptophan produces N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase activity","secondary_identifiers":["RHEA:14189","MetaCyc:RXN-8664","MetaCyc:RXN-8665"],"synonyms":[{"name":"D-tryptophan:oxygen 2,3-oxidoreductase (decyclizing) activity","type":"narrow"},{"name":"IDO","type":"related"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0033754"}


id: PBO:0079484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin 2","termid":"PBO:0079484"}


id: PBO:0055575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3011","termid":"PBO:0055575"}


id: PR:O94563
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.04 gene.","definition_xrefs":["UniProtKB:O94563","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C1773.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.04","synonyms":[{"name":"Spom972h-SPBC1773.04","type":"exact"}],"termid":"PR:O94563"}


id: PBO:0077135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOR signaling pathway regulator","termid":"PBO:0077135"}


id: PATO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000042 relative distance (obsolete PATO:0000042)","termid":"PATO:0000042"}


id: GO:2001105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltoheptaose transport","termid":"GO:2001105"}


id: PR:O94731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs8501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs85-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.19c","synonyms":[{"name":"Spom972h-trs8501","type":"exact"},{"name":"TRAPP subunit trs85-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94731"}


id: PBO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 12 (pseudogene)","termid":"PBO:0045601"}


id: PBO:0041730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 1","termid":"PBO:0041730"}


id: PBO:0030280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0030280"}


id: GO:0015091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric iron (Fe(III) or Fe3+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}


id: GO:0045610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemocyte differentiation","synonyms":[{"name":"regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045610"}


id: PBO:0058145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4441","termid":"PBO:0058145"}


id: PBO:0069538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 808, pseudogene","termid":"PBO:0069538"}


id: FYPO:0004670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is abnormal when the cell is subject to nitrogen starvation. Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["GO:0016236","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal macroautophagy during nitrogen starvation","synonyms":[{"name":"abnormal macroautophagy during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal macroautophagy during nitrogen depletion","type":"exact"},{"name":"abnormal macroautophagy during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004670"}


id: PBO:0088187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport","termid":"PBO:0088187"}


id: PBO:0057610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 943","termid":"PBO:0057610"}


id: PR:P18296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A separin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12792:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.04","secondary_identifiers":["UniProtKB:P18296"],"synonyms":[{"name":"SPCC5E4.04","type":"related"},{"name":"Separase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ESPL1","type":"exact"},{"name":"cell untimely torn protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P18296"}


id: GO:0097046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks.","definition_xrefs":["GOC:pr","PMID:20797631","GOC:bf","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication termination","termid":"GO:2000621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"replication fork progression beyond termination site","termid":"GO:0097046"}


id: GO:0051294
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112983,93078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process that set the alignment of spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"part_of","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0051179","GO:0007163","GO:0007010"],"is_obsolete":false,"name":"establishment of spindle orientation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"orienting of spindle","type":"exact"},{"name":"spindle orientation","type":"exact"}],"termid":"GO:0051294","terms_by_termid":{"GO:0000132":null}}


id: PBO:0043517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP5 divergent transcript","termid":"PBO:0043517"}


id: PBO:0016053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, Prp19 complex subunit Cdc5","termid":"PBO:0016053"}


id: GO:0047871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2),6-disulfo-D-glucosamine + H2O = N-sulfo-D-glucosamine + H+ + sulfate.","definition_xrefs":["RHEA:15517","EC:3.1.6.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"disulfoglucosamine-6-sulfatase activity","secondary_identifiers":["KEGG_REACTION:R03216","MetaCyc:DISULFOGLUCOSAMINE-6-SULFATASE-RXN"],"synonyms":[{"name":"6,N-disulfoglucosamine 6-O-sulfohydrolase activity","type":"related"},{"name":"N,6-O-disulfo-D-glucosamine 6-sulfohydrolase activity","type":"related"},{"name":"N-sulfoglucosamine-6-sulfatase activity","type":"related"},{"name":"disulphoglucosamine-6-sulphatase activity","type":"exact"}],"termid":"GO:0047871"}


id: PBO:0060620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK adaptor protein 1","termid":"PBO:0060620"}


id: PBO:0059576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 3","termid":"PBO:0059576"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PATO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"dense","termid":"PATO:0001164"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mass density","synonyms":[{"name":"high density","type":"exact"}],"termid":"PATO:0001788"}


id: PBO:0062558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 5","termid":"PBO:0062558"}


id: GO:0042483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation and development of a tooth or teeth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontogenesis","termid":"GO:0042481"},{"relation_name":"is_a","term_name":"negative regulation of animal organ morphogenesis","termid":"GO:0110111"},{"relation_name":"negatively_regulates","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontogenesis","secondary_identifiers":["GO:0042486"],"synonyms":[{"name":"down regulation of odontogenesis","type":"exact"},{"name":"down-regulation of odontogenesis","type":"exact"},{"name":"downregulation of odontogenesis","type":"exact"},{"name":"inhibition of odontogenesis","type":"narrow"},{"name":"negative regulation of odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"negative regulation of tooth development","type":"exact"}],"termid":"GO:0042483"}


id: PBO:0011420
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011420"}


id: PBO:0074484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 3","termid":"PBO:0074484"}


id: PBO:0013758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8 (predicted)","termid":"PBO:0013758"}


id: PBO:0028562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_meiotic_sister_chromatid_segregation","termid":"PBO:0028562"}


id: PR:Q09793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin p58/p45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.09c","secondary_identifiers":["UniProtKB:Q09793"],"synonyms":[{"name":"Spom972h-NUPL1","type":"exact"},{"name":"nuclear pore protein nup45 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09793"}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: GO:1901163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophoblast cell migration","termid":"GO:1901163"}


id: PBO:0089759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine protein transferase Ate1","termid":"PBO:0089759"}


id: GO:0018701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: organohalide + 2 H+ + 2 e- = R-H + HCl. Reactants include chlorohydroquinone (forms hydroquinone) and 2,5-dichlorohydroquinone (forms chlorohydroquinone).","definition_xrefs":["UM-BBD_enzymeID:e0366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,5-dichlorohydroquinone reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0018701"}


id: PBO:0056252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL2 antisense RNA 1","termid":"PBO:0056252"}


id: GO:0016171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface antigen (obsolete GO:0016171)","synonyms":[{"name":"cell surface antigen","type":"exact"}],"termid":"GO:0016171"}


id: PBO:0011447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec3","termid":"PBO:0011447"}


id: PBO:0073229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 2","termid":"PBO:0073229"}


id: FYPO:0004359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle DNA replication checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete.","definition_xrefs":["PomBase:mah","GO:0033314","PMID:11988741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0000173"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic cell cycle DNA replication checkpoint","termid":"FYPO:0004359"}


id: PBO:0047482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 9","termid":"PBO:0047482"}


id: PBO:0071261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 6","termid":"PBO:0071261"}


id: GO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall, involving more than one organism. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah","GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cell wall macromolecule metabolic process (obsolete GO:0044037)","synonyms":[{"name":"multi-organism cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044037"}


id: PBO:0109354
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase holoenzyme component","termid":"PBO:0109354"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: PBO:0082719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0082719"}


id: PBO:0059980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 25","termid":"PBO:0059980"}


id: PBO:0059673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 39","termid":"PBO:0059673"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["UM-BBD_enzymeID:e0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: PBO:0089932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein","termid":"PBO:0089932"}


id: PBO:0028146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus","termid":"PBO:0028146"}


id: PATO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000118 absolute size (obsolete PATO:0000118)","termid":"PATO:0000118"}


id: RO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"is_symbiosis","termid":"RO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_mutualism","termid":"RO:0002467"}


id: GO:0035232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a germ cell from their site of production to the gonad, through the attraction of cells towards their target.","definition_xrefs":["PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"germ cell migration","termid":"GO:0008354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell attraction","termid":"GO:0035232"}


id: PR:O74431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cation-transporting ATPase 13A3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04373","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase C1672.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.11c","secondary_identifiers":["UniProtKB:O74431"],"synonyms":[{"name":"Spom972h-ATP13A3","type":"exact"}],"termid":"PR:O74431"}


id: PBO:0074668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 54","termid":"PBO:0074668"}


id: PBO:0041088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRPF3 antisense RNA 1","termid":"PBO:0041088"}


id: GO:0018463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxyhexanoate + NAD+ = 6-oxohexanoate + H+ + NADH.","definition_xrefs":["RHEA:14225","EC:1.1.1.258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6-hydroxyhexanoate dehydrogenase activity","secondary_identifiers":["MetaCyc:6-HYDROXYHEXANOATE-OXIDATION-RXN","UM-BBD_reactionID:r0174","KEGG_REACTION:R05283"],"synonyms":[{"name":"6-hydroxyhexanoate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018463"}


id: PATO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organization quality","termid":"PATO:0002264"}


id: PBO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 3","termid":"PBO:0045481"}


id: PBO:0056582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter","termid":"PBO:0056582"}


id: PBO:0081290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 73, pseudogene","termid":"PBO:0081290"}


id: PBO:0040990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2B","termid":"PBO:0040990"}


id: PBO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y1","termid":"PBO:0061416"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PR:O74352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bridging integrator 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.12","secondary_identifiers":["UniProtKB:O74352"],"synonyms":[{"name":"Spom972h-BIN2","type":"exact"},{"name":"homolog of Bin1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74352"}


id: PBO:0036077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_vegetative_cell","termid":"PBO:0036077"}


id: PBO:0081997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 30","termid":"PBO:0081997"}


id: GO:0097424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Dense particles of heterochromatin, consisting of a loosely twisted strand about 600 Angstrom thick, found associated with the nucleolus.","definition_xrefs":["NIF_Subcellular:sao1210952635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005694","GO:0005730"],"is_obsolete":false,"name":"nucleolus-associated heterochromatin","termid":"GO:0097424"}


id: GO:0140650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of a pyramidal neuron along radial glial cells.","definition_xrefs":["PMID:3760547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia-guided pyramidal neuron migration","synonyms":[{"name":"radial glia-dependent neuronal migration","type":"exact"}],"termid":"GO:0140650"}


id: PBO:0049301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 3 pseudogene 1","termid":"PBO:0049301"}


id: GO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of an animal organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ identity","termid":"GO:0010092"}


id: PomGeneEx:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at a the same rate under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant","synonyms":[{"name":"gene expression constant","type":"exact"},{"name":"gene product level constant","type":"exact"}],"termid":"PomGeneEx:0000007"}


id: PBO:0077843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 2","termid":"PBO:0077843"}


id: PBO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachromatic leukodystrophy","termid":"PBO:0025483"}


id: GO:0046925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cross-linking of a cysteine residue to an L-phenylalanine residue to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["RESID:AA0341","PMID:12696888","PMID:36302388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide cross-linking","termid":"GO:0018149"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-phenylalanine modification","termid":"GO:0018207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking via 2-(S-L-cysteinyl)-D-phenylalanine","termid":"GO:0046925"}


id: GO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaluronan metabolic process","synonyms":[{"name":"hyaluronan metabolism","type":"exact"}],"termid":"GO:0030212"}


id: PBO:0036103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036103"}


id: GO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Kdo2-lipid A + phosphatidylethanolamine = phosphoethanolamine-Kdo2-lipid A + diacylglycerol.","definition_xrefs":["PMID:15795227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase activity","synonyms":[{"name":"EptB","type":"related"},{"name":"phosphoethanolamine transferase","type":"broad"}],"termid":"GO:0043838"}


id: GO:0035490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"}


id: PBO:0003025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght7 (predicted)","termid":"PBO:0003025"}


id: GO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyloct-2-enoyl-CoA + H2O = 3-hydroxy-4-methyloctanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-methyloct-2-enoyl-CoA hydratase activity","termid":"GO:0034581"}


id: PATO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which starts later than natural start point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed phase","termid":"PATO:0001542"}


id: GO:1905671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysosome organization.","definition_xrefs":["GOC:TermGenie","PMID:25561470","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lysosome organization","synonyms":[{"name":"regulation of lysosome organisation","type":"exact"},{"name":"regulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905671"}


id: PATO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"quality","termid":"PATO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative","termid":"PATO:0000068"}


id: FYPO:0005427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, is curved along the long axis to form a \\\"J\\\" shape, and contains cytoplasmic microtubules that curve to follow the long axis of the cell. In a curved cell, the long axis follows a smooth bend rather than a straight line. In a J-shaped cell, the curve is centered away from the midpoint of the long axis of the cell.","definition_xrefs":["PMID:11739790","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved interphase microtubules","termid":"FYPO:0003327"},{"relation_name":"has_part","term_name":"J-shaped vegetative cell","termid":"FYPO:0005790"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell with long curved interphase microtubules","termid":"FYPO:0005425"},{"relation_name":"is_a","term_name":"J-shaped vegetative cell","termid":"FYPO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"elongated J-shaped vegetative cell with curved interphase microtubules","synonyms":[{"name":"curved elongated J-shaped vegetative cell with curved cytoplasmic microtubules","type":"exact"},{"name":"elongated J-shaped cell with curved cytoplasmic microtubules","type":"exact"},{"name":"elongated J-shaped cell with curved interphase microtubules during vegetative growth","type":"exact"},{"name":"elongated J-shaped vegetative cell with curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"elongated J-shaped vegetative cell with curved interphase cytoplasmic microtubules","type":"exact"},{"name":"elongated J-shaped vegetative cell with curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005427"}


id: GO:0031473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class III myosin; myosin III is monomeric and has an N terminal kinase domain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0008092"],"is_obsolete":false,"name":"myosin III binding","termid":"GO:0031473"}


id: PBO:0053213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9C","termid":"PBO:0053213"}


id: PBO:0091369
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant showed a repair profile very similar to that of the rad51delta single mutant","termid":"PBO:0091369"}


id: PBO:0067197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 261, pseudogene","termid":"PBO:0067197"}


id: GO:1900561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydroaustinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol metabolic process","synonyms":[{"name":"dehydroaustinol metabolism","type":"exact"}],"termid":"GO:1900561"}


id: PR:Q09686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase-like protein C13C5.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.04","synonyms":[{"name":"Spom972h-SPAC13C5.04","type":"exact"}],"termid":"PR:Q09686"}


id: GO:0035938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estradiol into the circulatory system.","definition_xrefs":["GOC:sl","PMID:21632818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"estradiol secretion","synonyms":[{"name":"oestradiol secretion","type":"exact"}],"termid":"GO:0035938"}


id: GO:0032060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bleb, a cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Plasma membrane blebbing occurs during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["PMID:16624291","GOC:mah","GOC:mtg_apoptosis","PMID:12083798","Wikipedia:Bleb_(cell_biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bleb assembly","synonyms":[{"name":"blebbing","type":"broad"},{"name":"cell blebbing","type":"exact"},{"name":"membrane blebbing","type":"broad"},{"name":"plasma membrane bleb assembly","type":"exact"},{"name":"plasma membrane blebbing","type":"exact"}],"termid":"GO:0032060"}


id: PBO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5","termid":"PBO:0036485"}


id: PBO:0036304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg11","termid":"PBO:0036304"}


id: PATO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.","definition_xrefs":["PATO:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius","termid":"PATO:0002390"}


id: GO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin F (PGF (2-alpha)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F receptor activity","synonyms":[{"name":"PGF receptor activity","type":"related"},{"name":"PGF(2-alpha) receptor activity","type":"exact"}],"termid":"GO:0004958"}


id: GO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrion transport along microtubule","synonyms":[{"name":"mitochondrial migration along microtubule","type":"exact"},{"name":"mitochondrial transport along microtubule","type":"exact"}],"termid":"GO:0047497"}


id: GO:2000134
data:
  {"annotated_genes":["SJAG_03681","SJAG_02026","SJAG_01210","SJAG_00996","SJAG_01401","SJAG_03591","SJAG_05346","SJAG_00169","SJAG_00991","SJAG_00071","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85091,87840,88260,89422,94962,104953],"is_not":false,"summary":null,"term":"GO:2000134"},{"annotations":[85090,97698,111950,98441,104952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87414,105741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G1/S phase transition","termid":"GO:1902807"},{"relation_name":"is_a","term_name":"regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000045"},{"relation_name":"negatively_regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"negative regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000134","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: PBO:0072867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine N1-acetyltransferase 1","termid":"PBO:0072867"}


id: GO:0070440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3B, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Mad-Max-mSin3B complex","termid":"GO:0070440"}


id: GO:0038160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-X-C chemokine CXCL12 to a C-X-C chemokine type 4 receptor (CXCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-X-C motif) ligand 12 signaling pathway","termid":"GO:0038146"},{"relation_name":"is_a","term_name":"C-X-C chemokine receptor CXCR4 signaling pathway","termid":"GO:0038159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CXCL12-activated CXCR4 signaling pathway","synonyms":[{"name":"CXCL12-activated CXCR4 signalling pathway","type":"exact"}],"termid":"GO:0038160"}


id: GO:0061854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuroblast migration","termid":"GO:0061853"},{"relation_name":"positively_regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroblast migration","termid":"GO:0061854"}


id: PBO:0086579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0086579"}


id: FYPO_EXT:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"large fraction of cells (penetrance) or strong phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high","termid":"FYPO_EXT:0000001"}


id: PBO:0084308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I-SceI DNA endonuclease; encoded by the mitochondrial group I intron of the 21S_rRNA gene; mediates gene conversion that propagates the intron into intron-less copies of the 21S_rRNA gene","termid":"PBO:0084308"}


id: GO:0031411
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle; a hollow structure made of protein, which usually has the form of a cylindrical tube closed by conical end caps. By regulating their relative gas vesicle content, aquatic microbes are able to perform vertical migrations.","definition_xrefs":["PMID:22147705","PMID:8177173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gas vesicle","synonyms":[{"name":"gas vacuole","type":"related"}],"termid":"GO:0031411"}


id: PBO:0111520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 3","termid":"PBO:0111520"}


id: PBO:0028746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028746"}


id: PBO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp45","termid":"PBO:0012859"}


id: MOD:00719
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that oxygenates an L-methionine residue to one of the diastereomeric L-methionine sulfoxide residues.","definition_xrefs":["DeltaMass:177","OMSSA:1","PubMed:22116028","PubMed:21406390","RESID:AA0581","Unimod:35#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"L-methionine S-oxide","type":"exact"},{"name":"L-methionine sulfoxide","type":"exact"},{"name":"MOD_RES Methionine sulfoxide","type":"exact"},{"name":"MetO","type":"exact"},{"name":"Methionyl Sulfoxide","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"oxym","type":"exact"}],"termid":"MOD:00719"}


id: PBO:0091600
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cor-C? is nse6","termid":"PBO:0091600"}


id: PBO:0063184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 4","termid":"PBO:0063184"}


id: PBO:0048276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 12","termid":"PBO:0048276"}


id: PBO:0074927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 95","termid":"PBO:0074927"}


id: PBO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 1A","termid":"PBO:0045701"}


id: GO:0061977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of hip joint articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articular cartilage development","termid":"GO:0061975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hip joint articular cartilage development","termid":"GO:0061977"}


id: GO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin. Preferential cleavage: Ala-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase I activity (obsolete GO:0008125)","synonyms":[{"name":"elaszym","type":"related"},{"name":"pancreatic elastase I activity","type":"exact"},{"name":"pancreatopeptidase E activity","type":"related"},{"name":"serine elastase","type":"broad"}],"termid":"GO:0008125"}


id: PBO:0075706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT-ROBO Rho GTPase activating protein 2","termid":"PBO:0075706"}


id: GO:0009426
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the central rod of the bacterial-type flagellar basal body that is distal to the cell membrane; spans most of the distance between the inner and outer membranes.","definition_xrefs":["PMID:12624192","GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:11133968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body, rod","termid":"GO:0030694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, distal rod","synonyms":[{"name":"flagellar basal body, distal rod","type":"exact"},{"name":"flagellin-based flagellum basal body, distal rod","type":"exact"}],"termid":"GO:0009426"}


id: PBO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylamine","termid":"PBO:0030654"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: GO:0032251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of adenosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of adenosine transport","termid":"GO:0032249"},{"relation_name":"positively_regulates","term_name":"adenosine transport","termid":"GO:0032238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of adenosine transport","synonyms":[{"name":"activation of adenosine transport","type":"narrow"},{"name":"stimulation of adenosine transport","type":"narrow"},{"name":"up regulation of adenosine transport","type":"exact"},{"name":"up-regulation of adenosine transport","type":"exact"},{"name":"upregulation of adenosine transport","type":"exact"}],"termid":"GO:0032251"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PBO:0074248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC66A2 pseudogene 2","termid":"PBO:0074248"}


id: GO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from a RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase III","termid":"GO:0006385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III","synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001195"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: MOD:00536
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod 179 merged with Unimod 447 remap to ??? a protein modification that replaces an L-serine residue with an L-alanine residue","definition_xrefs":["Unimod:179"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00536 L-serine to L-alanine replacement (obsolete MOD:00536)","synonyms":[{"name":"Ser_Ala","type":"exact"}],"termid":"MOD:00536"}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: PBO:0066167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal biogenesis factor","termid":"PBO:0066167"}


id: PR:000050488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC20G8.05c","termid":"PR:000050488"}


id: PBO:0057942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3667","termid":"PBO:0057942"}


id: PBO:0077971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 23-1","termid":"PBO:0077971"}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: SO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mannosyl_queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl_queuosine","secondary_identifiers":["RNAMOD:046"],"synonyms":[{"name":"manQ","type":"exact"},{"name":"mannosyl queuosine","type":"exact"},{"name":"mannosyl-queuosine","type":"exact"}],"termid":"SO:0001320"}


id: GO:0032540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any behavior associated with finding a host organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of host-seeking behavior","termid":"GO:0032538"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"host-seeking behavior","termid":"GO:0032537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of host-seeking behavior","synonyms":[{"name":"activation of host-seeking behavior","type":"narrow"},{"name":"positive regulation of host-seeking behaviour","type":"exact"},{"name":"stimulation of host-seeking behavior","type":"narrow"},{"name":"up regulation of host-seeking behavior","type":"exact"},{"name":"up-regulation of host-seeking behavior","type":"exact"},{"name":"upregulation of host-seeking behavior","type":"exact"}],"termid":"GO:0032540"}


id: GO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:go_curators","GOC:dph","PMID:12618131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract morphogenesis","secondary_identifiers":["GO:0048547"],"synonyms":[{"name":"alimentary canal morphogenesis","type":"exact"},{"name":"digestive tube morphogenesis","type":"exact"},{"name":"gastrointestinal tract morphogenesis","type":"exact"},{"name":"gut morphogenesis","type":"broad"},{"name":"intestinal morphogenesis","type":"narrow"}],"termid":"GO:0048546"}


id: PBO:0055807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 2b, pseudogene","termid":"PBO:0055807"}


id: GO:0001990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"is_a","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by hormone","synonyms":[{"name":"blood pressure regulation by hormone","type":"exact"},{"name":"hormonal control of blood pressure","type":"related"},{"name":"hormonal regulation of blood pressure","type":"exact"}],"termid":"GO:0001990"}


id: PBO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 2","termid":"PBO:0070416"}


id: GO:0110158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A calcium-dependent protease complex that processes its substrate by limited proteolysis rather than degrading it. In some cases limited proteolysis is required for the activation of its substrate.","definition_xrefs":["GOC:bhm","PMID:10639123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"calpain complex","synonyms":[{"name":"M-calpain","type":"narrow"},{"name":"mu-calpain","type":"narrow"}],"termid":"GO:0110158"}


id: GO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"thyroid hormone mediated signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone mediated signaling pathway","synonyms":[{"name":"regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002155"}


id: PBO:0061962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 41 pseudogene","termid":"PBO:0061962"}


id: PBO:0073415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 21","termid":"PBO:0073415"}


id: PBO:0031774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_entry_into_G0","termid":"PBO:0031774"}


id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: GO:0009113
data:
  {"annotated_genes":["SJAG_02364","SJAG_01859","SJAG_03140","SJAG_01814","SJAG_01661","SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93906,106315,110558],"is_not":false,"summary":null,"term":"GO:0009113"},{"annotations":[113382,106314,106425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[89636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-841"],"synonyms":[{"name":"purine base anabolism","type":"exact"},{"name":"purine base biosynthesis","type":"exact"},{"name":"purine base biosynthetic process","type":"exact"},{"name":"purine base formation","type":"exact"},{"name":"purine base synthesis","type":"exact"}],"termid":"GO:0009113","terms_by_termid":{"GO:0006168":null,"GO:0009113":null,"GO:0046084":null}}


id: FYPO:0004532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur, and the position or morphology of the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000120","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle","synonyms":[{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal mitotic spindle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with condensed chromosomes and abnormal spindle","type":"related"},{"name":"abnormal mitotic cell cycle arrest in M phase with abnormal spindle","type":"exact"}],"termid":"FYPO:0004532"}


id: PBO:0044732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18","termid":"PBO:0044732"}


id: GO:0031283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cyclase activity","termid":"GO:0031280"},{"relation_name":"is_a","term_name":"regulation of guanylate cyclase activity","termid":"GO:0031282"},{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of guanylate cyclase activity","synonyms":[{"name":"down regulation of guanylate cyclase activity","type":"exact"},{"name":"down-regulation of guanylate cyclase activity","type":"exact"},{"name":"downregulation of guanylate cyclase activity","type":"exact"},{"name":"inhibition of guanylate cyclase activity","type":"narrow"}],"termid":"GO:0031283"}


id: GO:0010977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"negatively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection development","synonyms":[{"name":"growth cone collapse","type":"related"},{"name":"negative regulation of neurite biosynthesis","type":"narrow"},{"name":"negative regulation of neurite development","type":"narrow"},{"name":"negative regulation of neurite formation","type":"narrow"},{"name":"negative regulation of neurite growth","type":"narrow"}],"termid":"GO:0010977"}


id: PBO:0053667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 845","termid":"PBO:0053667"}


id: PBO:0078088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 5","termid":"PBO:0078088"}


id: PBO:0005607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR46","termid":"PBO:0005607"}


id: PBO:0082414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional chorismate synthase and flavin reductase; catalyzes the conversion of 5-enolpyruvylshikimate 3-phosphate (EPSP) to form chorismate, which is a precursor to aromatic amino acids; protein abundance increases in response to DNA replication stress","termid":"PBO:0082414"}


id: PBO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein (predicted)","termid":"PBO:0004346"}


id: PBO:0060663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicastrin","termid":"PBO:0060663"}


id: PBO:0110496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 11","termid":"PBO:0110496"}


id: FYPO:0006158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during S phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during mitotic S phase","synonyms":[{"name":"normal RNA accumulation during mitotic S phase","type":"related"},{"name":"normal RNA level during S phase during vegetative growth","type":"exact"},{"name":"normal RNA level during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mRNA level during mitotic S phase","type":"narrow"},{"name":"normal transcript level during mitotic S phase","type":"exact"}],"termid":"FYPO:0006158"}


id: GO:0009135
data:
  {"annotated_genes":["SJAG_02945","SJAG_02009","SJAG_03903","SJAG_04495","SJAG_00461","SJAG_03373","SJAG_02038","SJAG_00027","SJAG_00605","SJAG_00839","SJAG_04849","SJAG_04048","SJAG_00633","SJAG_06621","SJAG_02135","SJAG_03852","SJAG_03828","SJAG_02796","SJAG_00685","SJAG_04192","SJAG_05314","SJAG_02107","SJAG_01310","SJAG_02369","SJAG_03660","SJAG_06622","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[105463,101510,105459,101512,99465,101877,105462,91115,112401,105457,104994,90625,101511,94094,100533,101876,94365,104993,104990,104992,104996,104991,105458,104995,99723,105460,105461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[63676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94283,107634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[75029,71993],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009135","terms_by_termid":{"GO:0006096":null,"GO:0006172":null,"GO:0045820":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:11533229","PMID:16055745"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: PBO:0066477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 4","termid":"PBO:0066477"}


id: PBO:0049991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 3","termid":"PBO:0049991"}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: PR:O14329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zrg17 gene.","definition_xrefs":["UniProtKB:O14329","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc transporter zrg17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.14c","synonyms":[{"name":"Spom972h-zrg17","type":"exact"}],"termid":"PR:O14329"}


id: PBO:0086957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of peroxisome abundance; peroxisomal membrane protein, remote homolog to several curvature-generating human proteins; functionally interacts with vesicle-budding-inducing ADP-ribosylation factor Arf1p","termid":"PBO:0086957"}


id: GO:0098815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"}


id: PBO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member A","termid":"PBO:0046902"}


id: PBO:0073882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 2","termid":"PBO:0073882"}


id: SO:1001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Four base pair sequence immediately downstream of the redefined region. The redefined region is a frameshift site. The quadruplet is 2 overlapping codons.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanking_three_prime_quadruplet_recoding_signal","synonyms":[{"name":"flanking three prime quadruplet recoding signal","type":"exact"}],"termid":"SO:1001281"}


id: GO:0000062
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.","definition_xrefs":["GOC:jl","GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA binding","termid":"GO:0120227"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"fatty-acyl-CoA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty-acyl binding","type":"broad"},{"name":"fatty-acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0000062","terms_by_termid":{"GO:0036042":null}}


id: GO:0035028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"leading edge cell fate commitment","termid":"GO:0035027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leading edge cell fate determination","termid":"GO:0035028"}


id: PBO:0041044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 1","termid":"PBO:0041044"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: GO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["PMID:11265250","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein desumoylation","secondary_identifiers":["GO:0016928"],"synonyms":[{"name":"desumoylation","type":"exact"},{"name":"protein desumolation","type":"exact"}],"termid":"GO:0016926"}


id: GO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of Hulle cell development","termid":"GO:0070808"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Hulle cell development","termid":"GO:0070810"}


id: FYPO:0005574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear transport during meiosis","synonyms":[{"name":"abnormal nuclear transport during meiotic nuclear division","type":"related"}],"termid":"FYPO:0005574"}


id: PBO:0064417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase","termid":"PBO:0064417"}


id: PR:O94570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A valine--pyruvate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C1773.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.13","secondary_identifiers":["UniProtKB:O94570"],"synonyms":[{"name":"Spom972h-avtA","type":"exact"}],"termid":"PR:O94570"}


id: PBO:0077771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 34","termid":"PBO:0077771"}


id: PBO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF4 family","termid":"PBO:0001116"}


id: GO:1901344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leptomycin B","termid":"GO:1901344"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: GO:1900048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"positively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemostasis","synonyms":[{"name":"activation of hemostasis","type":"narrow"},{"name":"up regulation of hemostasis","type":"exact"},{"name":"up-regulation of hemostasis","type":"exact"},{"name":"upregulation of hemostasis","type":"exact"}],"termid":"GO:1900048"}


id: PR:P22192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pac1 gene.","definition_xrefs":["UniProtKB:P22192","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific pac1 ribonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.11c","synonyms":[{"name":"Spom972h-pac1","type":"exact"},{"name":"protein hcs (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22192"}


id: GO:1905177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tracheary element.","definition_xrefs":["PMID:20659276","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheary element differentiation","termid":"GO:1905177"}


id: GO:0034874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thioacetamide S-oxide + O2 + 2 H+ + 2 e- = thioacetamide S,S-dioxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r1313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thioacetamide S-oxide S-oxygenase activity","termid":"GO:0034874"}


id: PBO:0017833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C Pgc1 (predicted)","termid":"PBO:0017833"}


id: PBO:0089882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor Mix23","termid":"PBO:0089882"}


id: PBO:0111754
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0111754"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: GO:0098721
data:
  {"annotated_genes":["SJAG_03970","SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84602,91643],"is_not":false,"summary":null,"term":"GO:0098721"},{"annotations":[84251],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"uracil transmembrane transport","termid":"GO:1903791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902431"],"synonyms":[{"name":"uracil import into cell","type":"exact"}],"termid":"GO:0098721","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: GO:0140078
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92251],"is_not":false,"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of an AP site 3' of the baseless site by a beta-lyase mechanism, leaving an unsaturated aldehyde, termed a 3'-(4-hydroxy-5-phospho-2-pentenal) residue, and a 5'-phosphate.","definition_xrefs":["PMID:1698278","RHEA:66592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"class I DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:AP_endonuclease","EC:4.2.99.18","MetaCyc:4.2.99.18-RXN"],"synonyms":[{"name":"AP endonuclease class I activity","type":"related"},{"name":"AP lyase activity","type":"related"},{"name":"AP site-DNA 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase activity","type":"exact"},{"name":"DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"},{"name":"class I AP endonuclease activity","type":"related"},{"name":"class I DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0140078","terms_by_termid":{"GO:0140078":null}}


id: GO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075085)","synonyms":[{"name":"activation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by host of symbiont transmembrane receptor protein activity involved in cAMP-mediated signal transduction","type":"exact"},{"name":"stimulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075085"}


id: FYPO:0000602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic G1 phase progression","synonyms":[{"name":"abnormal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G1","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: abnormal","type":"related"}],"termid":"FYPO:0000602"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["PMID:23447642","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: GO:0031438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA cleavage.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA cleavage (obsolete GO:0031438)","synonyms":[{"name":"down regulation of mRNA cleavage","type":"exact"},{"name":"down-regulation of mRNA cleavage","type":"exact"},{"name":"downregulation of mRNA cleavage","type":"exact"},{"name":"inhibition of mRNA cleavage","type":"narrow"}],"termid":"GO:0031438"}


id: PBO:0046821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA core complex associated protein 100","termid":"PBO:0046821"}


id: PBO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 71","termid":"PBO:0052804"}


id: GO:0070178
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:jsg","CHEBI:16523","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-serine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-serine metabolism","type":"exact"}],"termid":"GO:0070178","terms_by_termid":{"GO:0036088":null}}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: PBO:0089016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop6/Pop7 ortholog","termid":"PBO:0089016"}


id: PBO:0043341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride nucleotide-sensitive channel 1A","termid":"PBO:0043341"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: MOD:01123
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01123. Remap to MOD:01123.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01123 monoiodated tyrosine (obsolete MOD:01123)","termid":"MOD:01123"}


id: GO:0035614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem-loop in a small nuclear RNA (snRNA). An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["PMID:20455544","PMID:16568238","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA stem-loop binding","termid":"GO:0035613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"snRNA stem-loop binding","synonyms":[{"name":"small nuclear RNA stem-loop binding","type":"exact"},{"name":"snRNA hairpin binding","type":"exact"},{"name":"snRNA hairpin loop binding","type":"exact"}],"termid":"GO:0035614"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: PBO:0040009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 17A","termid":"PBO:0040009"}


id: GO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cord development","termid":"GO:0007419"}


id: PBO:0004718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb7","termid":"PBO:0004718"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: GO:0015205
data:
  {"annotated_genes":["SJAG_03777","SJAG_02147","SJAG_04714","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77012],"is_not":false,"summary":null,"term":"GO:0015205"},{"annotations":[108603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[108604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[84603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015210"},{"annotations":[84604,91644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"},{"annotations":[84593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02147":null,"SJAG_03777":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015392"],"termid":"GO:0015205","terms_by_termid":{"GO:0015205":null,"GO:0015207":null,"GO:0015208":null,"GO:0015210":null,"GO:0015505":null,"GO:0042907":null}}


id: PBO:0084478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type locus; note that the systematic sequence in SGD contains MATalpha sequences","termid":"PBO:0084478"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PBO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSN-associated deubiquitinating enzyme Ubp12","termid":"PBO:0005833"}


id: PBO:0005378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, DUF2457 family","termid":"PBO:0005378"}


id: PBO:0057410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548l","termid":"PBO:0057410"}


id: PBO:0078064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 54","termid":"PBO:0078064"}


id: PBO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF185 protein, mitochondrial","termid":"PBO:0001339"}


id: GO:0051246
data:
  {"annotated_genes":["SJAG_02026","SJAG_02812","SJAG_04383","SJAG_03699","SJAG_16454","SJAG_04085","SJAG_02043","SJAG_00786","SJAG_04130","SJAG_02592","SJAG_00712","SJAG_00892","SJAG_04959","SJAG_02485","SJAG_01985","SJAG_02189","SJAG_00579","SJAG_01489","SJAG_04291","SJAG_01544","SJAG_01942","SJAG_02244","SJAG_04873","SJAG_02723","SJAG_00766","SJAG_04477","SJAG_02072","SJAG_04452","SJAG_03550","SJAG_00071","SJAG_00052","SJAG_03677","SJAG_05000","SJAG_04756","SJAG_05265","SJAG_00423","SJAG_02638","SJAG_01436","SJAG_04544","SJAG_00642","SJAG_04159","SJAG_00690","SJAG_01131","SJAG_04890","SJAG_00169","SJAG_01210","SJAG_02467","SJAG_04088","SJAG_03501","SJAG_01079","SJAG_00251","SJAG_00475","SJAG_00600","SJAG_03869","SJAG_02285","SJAG_04546","SJAG_01517","SJAG_01249","SJAG_03048","SJAG_01047","SJAG_04990","SJAG_01058","SJAG_01528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[95525,91697,114232,110904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[87415,105742,108214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[105743,111656,88913,90468,88616,95417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[86531,103011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[57422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"},{"annotations":[85092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[84725,102716,113158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000767"},{"annotations":[97989,108727,94794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070131"},{"annotations":[96535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"},{"annotations":[66196,67371,64816,67747,60833,66437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[107771,104957,113107,102719,98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[98465,107232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045732"},{"annotations":[95477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[65692,67546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045901"},{"annotations":[97083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045948"},{"annotations":[65693,90905,67547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045905"},{"annotations":[113482,96349,96794,112865,107220,98655,101301,105775,92181,92316,86398,95530,108453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000765"},{"annotations":[106220,91568,105557,110036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"},{"annotations":[100037,91325,99408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"},{"annotations":[76537,95942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061136"},{"annotations":[110678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"},{"annotations":[68133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042176"},{"annotations":[99178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990983"},{"annotations":[107772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006449"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"protein metabolic 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of protein metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0032268"],"synonyms":[{"name":"regulation of cellular protein metabolic process","type":"related"},{"name":"regulation of cellular protein metabolism","type":"related"},{"name":"regulation of protein metabolism","type":"exact"}],"termid":"GO:0051246","terms_by_termid":{"GO:0006449":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0033234":null,"GO:0042176":null,"GO:0045732":null,"GO:0045901":null,"GO:0045905":null,"GO:0045948":null,"GO:0061136":null,"GO:0070131":null,"GO:0070134":null,"GO:0140018":null,"GO:1901800":null,"GO:1904352":null,"GO:1904689":null,"GO:1905785":null,"GO:1905786":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null,"GO:2000765":null,"GO:2000766":null,"GO:2000767":null}}


id: GO:1900708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol A biosynthetic process","termid":"GO:1900707"},{"relation_name":"negatively_regulates","term_name":"tensidol A biosynthetic process","termid":"GO:1900605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tensidol A biosynthetic process","synonyms":[{"name":"down regulation of tensidol A anabolism","type":"exact"},{"name":"down regulation of tensidol A biosynthesis","type":"exact"},{"name":"down regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down regulation of tensidol A formation","type":"exact"},{"name":"down regulation of tensidol A synthesis","type":"exact"},{"name":"down-regulation of tensidol A anabolism","type":"exact"},{"name":"down-regulation of tensidol A biosynthesis","type":"exact"},{"name":"down-regulation of tensidol A biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol A formation","type":"exact"},{"name":"down-regulation of tensidol A synthesis","type":"exact"},{"name":"downregulation of tensidol A anabolism","type":"exact"},{"name":"downregulation of tensidol A biosynthesis","type":"exact"},{"name":"downregulation of tensidol A biosynthetic process","type":"exact"},{"name":"downregulation of tensidol A formation","type":"exact"},{"name":"downregulation of tensidol A synthesis","type":"exact"},{"name":"inhibition of tensidol A anabolism","type":"exact"},{"name":"inhibition of tensidol A biosynthesis","type":"exact"},{"name":"inhibition of tensidol A biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol A formation","type":"exact"},{"name":"inhibition of tensidol A synthesis","type":"exact"},{"name":"negative regulation of tensidol A anabolism","type":"exact"},{"name":"negative regulation of tensidol A biosynthesis","type":"exact"},{"name":"negative regulation of tensidol A formation","type":"exact"},{"name":"negative regulation of tensidol A synthesis","type":"exact"}],"termid":"GO:1900708"}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: PBO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin","termid":"PBO:0002813"}


id: PBO:0040582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 1","termid":"PBO:0040582"}


id: GO:0160066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SIN signaling complex associated with the old mitotic spindle pole body during interphase and early M-phase and characterised by the presence active ubiquitin ligase (Dma1 in fission yeast) and GTPase activator (Spg1 in fission yeast) to inactivate SIN signaling.","definition_xrefs":["PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SIN/MEN signaling complex","termid":"GO:0160065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"interphase SIN signaling complex","synonyms":[{"name":"interphase SIN signalling complex","type":"exact"}],"termid":"GO:0160066"}


id: GO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of macropinosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus in a macropinosome, and results in release of the viral contents from the macropinosome into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macropinosomal membrane permeabilization involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via macropinocytosis followed by macropinosomal membrane permeabilization","type":"related"}],"termid":"GO:0075504"}


id: MOD:00470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS-LC-Biotin","synonyms":[{"name":"NHS-LC-Biotin","type":"related"}],"termid":"MOD:00470"}


id: FYPO:0004368
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an arsenic-containing substance.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on arsenic","synonyms":[{"name":"normal cell population growth in presence of arsenic","type":"exact"},{"name":"normal cell population growth on arsenic","type":"exact"},{"name":"normal cellular response to arsenic","type":"related"},{"name":"normal growth on arsenic molecular entity","type":"exact"},{"name":"normal growth on arsenic-containing substance","type":"exact"},{"name":"normal vegetative cell population growth on arsenic","type":"exact"}],"termid":"FYPO:0004368"}


id: PATO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches branching into a reticulum toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulodromous","termid":"PATO:0001972"}


id: GO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"},{"relation_name":"positively_regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmacytoid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002612"}


id: PBO:0084869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein","termid":"PBO:0084869"}


id: FYECO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MM with trace glucose","synonyms":[{"name":"minimal medium with trace glucose","type":"exact"},{"name":"very low glucose MM","type":"exact"}],"termid":"FYECO:0000430"}


id: SO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+2): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_one","secondary_identifiers":["BS:00216"],"synonyms":[{"name":"beta turn right handed type one","type":"exact"},{"name":"beta_turn_ir","type":"exact"},{"name":"type I beta turn","type":"exact"},{"name":"type I turn","type":"exact"}],"termid":"SO:0001136"}


id: PBO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimerin 2","termid":"PBO:0043040"}


id: GO:0102444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isorhamnetin + S-adenosyl-L-methionine = 3,3'-dimethylquercetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isorhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13929"],"termid":"GO:0102444"}


id: GO:0071928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of tyramine binding to a cell surface receptor.","definition_xrefs":["PMID:15355245","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"tyramine signaling pathway","synonyms":[{"name":"tyramine signalling pathway","type":"exact"}],"termid":"GO:0071928"}


id: PBO:0017425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_part_of","termid":"PBO:0017425"}


id: FYPO:0005947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing potassium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on potassium chloride","synonyms":[{"name":"normal cell population growth in presence of potassium chloride","type":"exact"},{"name":"normal cell population growth on KCl","type":"exact"},{"name":"normal cell population growth on potassium chloride","type":"exact"},{"name":"normal cellular response to potassium chloride","type":"related"},{"name":"normal vegetative cell population growth on potassium chloride","type":"exact"}],"termid":"FYPO:0005947"}


id: GO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate determination","synonyms":[{"name":"axial mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048323"}


id: PBO:0068496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 80, pseudogene","termid":"PBO:0068496"}


id: PBO:0058432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4802","termid":"PBO:0058432"}


id: PBO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 40","termid":"PBO:0050338"}


id: GO:1990419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an elemental metal stimulus.","definition_xrefs":["PMID:22688007"],"gene_count":0,"genotype_count":0,"name":"obsolete response to elemental metal (obsolete GO:1990419)","synonyms":[{"name":"response to elemental metal","type":"exact"}],"termid":"GO:1990419"}


id: PBO:0057529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 646","termid":"PBO:0057529"}


id: PBO:0012542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_agent","termid":"PBO:0012542"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: PBO:0087117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor required for maturation of 18S rRNA; null mutant is sensitive to hydroxyurea and is delayed in recovering from alpha-factor arrest; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus","termid":"PBO:0087117"}


id: PBO:0073034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin receptor","termid":"PBO:0073034"}


id: PBO:0068260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N2","termid":"PBO:0068260"}


id: PBO:0078084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPPC2L pseudogene 1","termid":"PBO:0078084"}


id: PBO:0061748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: PBO:0083811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential RNA-binding component of cleavage and polyadenylation factor; contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083811"}


id: PBO:0045334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 9","termid":"PBO:0045334"}


id: PBO:0005216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf10","termid":"PBO:0005216"}


id: PBO:0066679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 1","termid":"PBO:0066679"}


id: PBO:0091547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SPT15","termid":"PBO:0091547"}


id: GO:1901092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"positively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein tetramerization","synonyms":[{"name":"activation of protein tetramer assembly","type":"narrow"},{"name":"activation of protein tetramer biosynthesis","type":"narrow"},{"name":"activation of protein tetramer biosynthetic process","type":"narrow"},{"name":"activation of protein tetramer formation","type":"narrow"},{"name":"activation of protein tetramerization","type":"narrow"},{"name":"positive regulation of protein tetramer assembly","type":"exact"},{"name":"positive regulation of protein tetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramer assembly","type":"exact"},{"name":"up regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramerization","type":"exact"},{"name":"up-regulation of protein tetramer assembly","type":"exact"},{"name":"up-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein tetramer formation","type":"exact"},{"name":"up-regulation of protein tetramerization","type":"exact"},{"name":"upregulation of protein tetramer assembly","type":"exact"},{"name":"upregulation of protein tetramer biosynthesis","type":"exact"},{"name":"upregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein tetramer formation","type":"exact"},{"name":"upregulation of protein tetramerization","type":"exact"}],"termid":"GO:1901092"}


id: GO:0018863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9(S),10(S)-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-9,10-epoxide hydrolase activity","termid":"GO:0019119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenanthrene-9,10-epoxide hydrolase (9S,10S-forming) activity","termid":"GO:0018863"}


id: PBO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase inhibitor (predicted)","termid":"PBO:0005837"}


id: PBO:0030515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_camptothecin","termid":"PBO:0030515"}


id: PBO:0084761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p","termid":"PBO:0084761"}


id: GO:1902191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbutanoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:15574432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbutanoyl-CoA(4-) metabolic process","termid":"GO:1902189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902191"}


id: PBO:0015664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA replication ligase Cdc17","termid":"PBO:0015664"}


id: SO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant that is located within the UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_variant","synonyms":[{"name":"UTR variant","type":"exact"},{"name":"UTR_","type":"exact"}],"termid":"SO:0001622"}


id: GO:0006412
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