# terms

id: PBO:0080379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS11 core subunit of CORVET and HOPS complexes","termid":"PBO:0080379"}


id: PBO:0065335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 59, pseudogene","termid":"PBO:0065335"}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["RHEA:17673","MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: PBO:0074557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 10","termid":"PBO:0074557"}


id: GO:0035500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MH2 (MAD homology 2) protein domain. The MH2 domain is found at the carboxy-terminus of MAD related proteins such as Smads. The MH2 domain mediates interaction with a wide variety of proteins and provides specificity and selectivity to Smad function and also is critical for mediating interactions in Smad oligomers.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MH2 domain binding","synonyms":[{"name":"MAD homology 2 domain binding","type":"exact"}],"termid":"GO:0035500"}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: PBO:0002700
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possibly related to human/mouse periphilin","termid":"PBO:0002700"}


id: PBO:0059908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 31","termid":"PBO:0059908"}


id: PBO:0028539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_primary_cell_septum_thickness","termid":"PBO:0028539"}


id: GO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host enzyme activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host catalytic activity (obsolete GO:0039516)","synonyms":[{"name":"modulation of catalytic activity of host by virus","type":"exact"},{"name":"regulation by virus of host catalytic activity","type":"exact"},{"name":"regulation of host catalytic activity by virus","type":"exact"}],"termid":"GO:0039516"}


id: PBO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 51","termid":"PBO:0071445"}


id: PBO:0039286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 15, pseudogene","termid":"PBO:0039286"}


id: PBO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase family member 4","termid":"PBO:0060315"}


id: GO:0010705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs resulting in double strand break formation and repair through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0006310","GO:0140013","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in reciprocal meiotic recombination","termid":"GO:0010705"}


id: GO:1902931
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["PMID:23332010","GOC:mengo_curators","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"negatively_regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of alcohol anabolism","type":"exact"},{"name":"down regulation of alcohol biosynthesis","type":"exact"},{"name":"down regulation of alcohol biosynthetic process","type":"exact"},{"name":"down regulation of alcohol formation","type":"exact"},{"name":"down regulation of alcohol synthesis","type":"exact"},{"name":"down-regulation of alcohol anabolism","type":"exact"},{"name":"down-regulation of alcohol biosynthesis","type":"exact"},{"name":"down-regulation of alcohol biosynthetic process","type":"exact"},{"name":"down-regulation of alcohol formation","type":"exact"},{"name":"down-regulation of alcohol synthesis","type":"exact"},{"name":"downregulation of alcohol anabolism","type":"exact"},{"name":"downregulation of alcohol biosynthesis","type":"exact"},{"name":"downregulation of alcohol biosynthetic process","type":"exact"},{"name":"downregulation of alcohol formation","type":"exact"},{"name":"downregulation of alcohol synthesis","type":"exact"},{"name":"inhibition of alcohol anabolism","type":"narrow"},{"name":"inhibition of alcohol biosynthesis","type":"narrow"},{"name":"inhibition of alcohol biosynthetic process","type":"narrow"},{"name":"inhibition of alcohol formation","type":"narrow"},{"name":"inhibition of alcohol synthesis","type":"narrow"},{"name":"negative regulation of alcohol anabolism","type":"exact"},{"name":"negative regulation of alcohol biosynthesis","type":"exact"},{"name":"negative regulation of alcohol formation","type":"exact"},{"name":"negative regulation of alcohol synthesis","type":"exact"},{"name":"negative regulation of solventogenesis","type":"broad"}],"termid":"GO:1902931","terms_by_termid":{"GO:0010895":null}}


id: GO:0048207
data:
  {"annotated_genes":["SJAG_00284"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91620],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"}]},"cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the rough endoplasmic reticulum to the cis-Golgi.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, rough ER to cis-Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rough ER to cis-Golgi targeting","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi targeting","type":"exact"},{"name":"vesicle targeting, rough endoplasmic reticulum to cis-Golgi","type":"exact"}],"termid":"GO:0048207","terms_by_termid":{"GO:0048208":null}}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["EC:1.4.4.2","EC:2.1.2.10"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: GO:1905500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a heteroreceptor complex.","definition_xrefs":["GO_REF:0000079","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:24157794"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex assembly (obsolete GO:1905500)","synonyms":[{"name":"heteroreceptor complex formation","type":"exact"}],"termid":"GO:1905500"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["EC:1.8.1.10","MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: PBO:0039918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF17 antisense RNA 1","termid":"PBO:0039918"}


id: GO:0033918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose in kappa-carrageenans.","definition_xrefs":["EC:3.2.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"kappa-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.83-RXN"],"synonyms":[{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase (configuration-retaining) activity","type":"related"},{"name":"kappa-carrageenan 4-beta-D-glycanohydrolase activity","type":"related"}],"termid":"GO:0033918"}


id: FYPO:0002138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA catabolic process during vegetative growth","synonyms":[{"name":"increased RNA breakdown during vegetative growth","type":"exact"},{"name":"increased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"increased RNA catabolism during vegetative growth","type":"exact"},{"name":"increased RNA degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0002138"}


id: PR:Q09927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aca1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.04","synonyms":[{"name":"Spom972h-aca1","type":"exact"}],"termid":"PR:Q09927"}


id: PBO:0029491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiotic_cell_cycle","termid":"PBO:0029491"}


id: PBO:0064487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase theta","termid":"PBO:0064487"}


id: PBO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 18","termid":"PBO:0045828"}


id: PATO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000905 f1 fertile (obsolete PATO:0000905)","termid":"PATO:0000905"}


id: GO:0051293
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112983,93078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The directed movement of the spindle to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0051179","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"establishment of spindle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of spindle localisation","type":"exact"},{"name":"spindle positioning","type":"exact"}],"termid":"GO:0051293","terms_by_termid":{"GO:0000132":null}}


id: GO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrogen peroxide is transported across a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide transmembrane transport","synonyms":[{"name":"hydrogen peroxide membrane transport","type":"exact"}],"termid":"GO:0080170"}


id: PBO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 30","termid":"PBO:0046588"}


id: PBO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (predicted)","termid":"PBO:0004523"}


id: PBO:0085844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YDR222W has a paralog, YLR225C, that arose from the whole genome duplication","termid":"PBO:0085844"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: PBO:0049284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 3","termid":"PBO:0049284"}


id: PBO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIB antisense RNA 1","termid":"PBO:0060948"}


id: PATO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of size which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of size","termid":"PATO:0001956"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of size","synonyms":[{"name":"low variability of size","type":"exact"}],"termid":"PATO:0001957"}


id: PBO:0078054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 44","termid":"PBO:0078054"}


id: PBO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase","termid":"PBO:0001995"}


id: FYECO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was altered in the experiment, compared to expressing the gene from the genome and its endogenous promoter.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000003 expression level (obsolete FYECO:0000003)","termid":"FYECO:0000003"}


id: PBO:0069056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 302, pseudogene","termid":"PBO:0069056"}


id: GO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-aminobutanoyl-CoA = crotonoyl-CoA + NH4.","definition_xrefs":["EC:4.3.1.14","RHEA:10056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-aminobutyryl-CoA ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.14-RXN","KEGG_REACTION:R03030"],"synonyms":[{"name":"L-3-aminobutyryl-CoA ammonia-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"L-3-aminobutyryl-CoA ammonia-lyase activity","type":"related"},{"name":"L-3-aminobutyryl-CoA deaminase activity","type":"related"}],"termid":"GO:0047459"}


id: PBO:0016877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniprot_identifier","termid":"PBO:0016877"}


id: PBO:0044757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 41","termid":"PBO:0044757"}


id: PBO:0041904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core-binding factor subunit beta","termid":"PBO:0041904"}


id: PBO:0065149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1 pseudogene 1","termid":"PBO:0065149"}


id: FYPO:0000637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth rate on glucose carbon source","synonyms":[{"name":"enhanced growth on glucose","type":"related"},{"name":"fast cell population growth on glucose carbon source","type":"exact"},{"name":"increased cell population proliferation on glucose carbon source","type":"related"},{"name":"increased cell proliferation on glucose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on glucose carbon source","type":"exact"}],"termid":"FYPO:0000637"}


id: GO:1901191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"negatively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"negative regulation of formation of translation initiation ternary complex","synonyms":[{"name":"down regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"down-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"down-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"downregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"downregulation of translation initiation ternary complex assembly","type":"exact"},{"name":"inhibition of formation of translation initiation ternary complex","type":"narrow"},{"name":"inhibition of translation initiation ternary complex assembly","type":"exact"},{"name":"negative regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901191"}


id: PBO:0071831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 26","termid":"PBO:0071831"}


id: GO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal octapeptide as second stage of processing of some proteins imported in the mitochondrion.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial intermediate peptidase activity (obsolete GO:0004243)","synonyms":[{"name":"MIP","type":"broad"},{"name":"mitochondrial intermediate peptidase activity","type":"exact"},{"name":"mitochondrial intermediate precursor-processing proteinase activity","type":"related"}],"termid":"GO:0004243"}


id: PBO:0005093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAZ domain","termid":"PBO:0005093"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0078014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 4","termid":"PBO:0078014"}


id: PBO:0074550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 3","termid":"PBO:0074550"}


id: PBO:0083730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential alpha-kleisin subunit of the cohesin complex; required for sister chromatid cohesion in mitosis; subject to proteolytic cleavage by separase Esp1p, resulting in dissociation of cohesin from chromatin and the separation of sister chromatids at the mitotic metaphase-to-anaphase transition; apoptosis induces cleavage and translocation of a C-terminal fragment to mitochondria; expression peaks in S phase","termid":"PBO:0083730"}


id: GO:1901709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-larreatricin.","definition_xrefs":["GOC:TermGenie","PMID:12960376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-larreatricin metabolic process","synonyms":[{"name":"(+)-larreatricin metabolism","type":"exact"}],"termid":"GO:1901709"}


id: GO:0032892
data:
  {"annotated_genes":["SJAG_04920","SJAG_02605","SJAG_00991","SJAG_05346","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[87842,89424,106604,94965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[89425,94966,87843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organic acid transport","type":"narrow"},{"name":"stimulation of organic acid transport","type":"narrow"},{"name":"up regulation of organic acid transport","type":"exact"},{"name":"up-regulation of organic acid transport","type":"exact"},{"name":"upregulation of organic acid transport","type":"exact"}],"termid":"GO:0032892","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0061975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AO member 1 pseudogene","termid":"PBO:0061975"}


id: MOD:00312
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-myristoyl-L-cysteine.","definition_xrefs":["PubMed:8824274","RESID:AA0307","PubMed:10080938","Unimod:45#C","PubMed:10026218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-myristoylated residue","termid":"MOD:00655"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-myristoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(tetradecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"LIPID S-myristoyl cysteine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"S-(C14:1 aliphatic acyl)cysteine","type":"exact"},{"name":"S-myristoyl-L-cysteine","type":"exact"},{"name":"S-myristoylated L-cysteine","type":"exact"},{"name":"SMyrCys","type":"exact"},{"name":"tetradecanoate cysteine thioester","type":"exact"}],"termid":"MOD:00312"}


id: PBO:0072435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 9","termid":"PBO:0072435"}


id: FYPO:0002980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased chromatin binding","termid":"FYPO:0002980"}


id: PBO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 127","termid":"PBO:0042064"}


id: PBO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase","termid":"PBO:0003133"}


id: PBO:0031190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall_during_vegetative_growth","termid":"PBO:0031190"}


id: GO:0006390
data:
  {"annotated_genes":["SJAG_03289","SJAG_03014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83575],"is_not":false,"summary":null,"term":"GO:0006390"},{"annotations":[83577,91237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006391"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase.","definition_xrefs":["PMID:23632312","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"part_of","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0140053","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mitochondrial transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0006390","terms_by_termid":{"GO:0006390":null,"GO:0006391":null}}


id: PBO:0076285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor pseudogene 2","termid":"PBO:0076285"}


id: PBO:0011104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1 (predicted)","termid":"PBO:0011104"}


id: PBO:0084454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication","termid":"PBO:0084454"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PBO:0086239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes primarily to the plasma membrane; also found at the nuclear envelope; long-lived protein that is asymmetrically retained in the plasma membrane of mother cells; the authentic, non-tagged protein is detected in mitochondria in a phosphorylated state; null mutation confers sensitivity to acetic acid","termid":"PBO:0086239"}


id: GO:0060404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of an axonemal microtubule. An axonemal microtubule is a microtubule in the axoneme of a cilium or flagellum; an axoneme contains nine modified doublet microtubules surrounding a pair of single microtubules.","definition_xrefs":["GOC:tb","GOC:krc","GOC:dph","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"},{"relation_name":"is_a","term_name":"cilium disassembly","termid":"GO:0061523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"axonemal microtubule depolymerization","termid":"GO:0060404"}


id: GO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"positively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-15 production","secondary_identifiers":["GO:0045374"],"synonyms":[{"name":"activation of interleukin-15 production","type":"narrow"},{"name":"positive regulation of IL-15 production","type":"exact"},{"name":"positive regulation of interleukin-15 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-15 production","type":"narrow"},{"name":"up regulation of interleukin-15 production","type":"exact"},{"name":"up-regulation of interleukin-15 production","type":"exact"},{"name":"upregulation of interleukin-15 production","type":"exact"}],"termid":"GO:0032738"}


id: PBO:0086824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL033W has a paralog, YNL019C, that arose from a segmental duplication","termid":"PBO:0086824"}


id: PBO:0109369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4C","termid":"PBO:0109369"}


id: FYPO:0000399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic G2/M phase transition","synonyms":[{"name":"abnormal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"abnormal cell cycle progression through mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic G2/M cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M phase transition","type":"exact"},{"name":"cell cycle progression through the G2/M phase transition: abnormal","type":"related"}],"termid":"FYPO:0000399"}


id: PBO:0060451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine kinase","termid":"PBO:0060451"}


id: PBO:0048535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 1","termid":"PBO:0048535"}


id: PBO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6","termid":"PBO:0048142"}


id: PBO:0059683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 49","termid":"PBO:0059683"}


id: GO:0061829
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Actin-based structures involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["PMID:20403871","PMID:22510523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulobulbar complex","termid":"GO:0036284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"basal tubulobulbar complex","synonyms":[{"name":"basal TBC","type":"exact"}],"termid":"GO:0061829"}


id: GO:0018453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.","definition_xrefs":["UM-BBD_reactionID:r0018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-hydroxytetrahydrofuran dehydrogenase activity","termid":"GO:0018453"}


id: FYPO:0001234
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115096,115168,115169,115230,115231,115268,115411,115412,115561,115586],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which vegetative cell population growth is slower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"viable vegetative cell population","termid":"FYPO:0002060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_01242":null,"SJAG_01355":null,"SJAG_02763":null,"SJAG_03449":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"slow vegetative cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00514","SJAG_00429","SJAG_03892","SJAG_01242","SJAG_02763","SJAG_03449","SJAG_05207","SJAG_00364","SJAG_01355"],"single_locus_genotype_uniquenames":["rad3delta","scd1delta","rad26delta","vps32delta","vps4delta","cmp7delta","cox6delta","ned1delta","man1delta"],"synonyms":[{"name":"decreased cell population proliferation","type":"related"},{"name":"decreased cell proliferation","type":"related"},{"name":"decreased vegetative cell population growth rate","type":"exact"},{"name":"growth defect, slow growth","type":"broad"},{"name":"increased doubling time","type":"related"},{"name":"reduced cell proliferation","type":"related"},{"name":"reduced vegetative cell population growth rate","type":"exact"}],"termid":"FYPO:0001234","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000103":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001234":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:1905898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to endoplasmic reticulum stress.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","GOC:aruk","PMID:21803450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"positively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to endoplasmic reticulum stress","synonyms":[{"name":"activation of ER stress response","type":"narrow"},{"name":"activation of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"activation of response to ER stress","type":"narrow"},{"name":"activation of response to endoplasmic reticulum stress","type":"narrow"},{"name":"positive regulation of ER stress response","type":"exact"},{"name":"positive regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"positive regulation of response to ER stress","type":"exact"},{"name":"up regulation of ER stress response","type":"exact"},{"name":"up regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up regulation of response to ER stress","type":"exact"},{"name":"up regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of ER stress response","type":"exact"},{"name":"up-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of response to ER stress","type":"exact"},{"name":"up-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of ER stress response","type":"exact"},{"name":"upregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"upregulation of response to ER stress","type":"exact"},{"name":"upregulation of response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1905898"}


id: PBO:0038916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRF5 antisense RNA 1","termid":"PBO:0038916"}


id: PBO:0041951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 2","termid":"PBO:0041951"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: PATO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's body consisting of one sac.","definition_xrefs":["mondofacto:mondofacto"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic","termid":"PATO:0001673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocystic","termid":"PATO:0002088"}


id: PBO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG2 catalytic domain","termid":"PBO:0018183"}


id: PBO:0080946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1 pseudogene 1","termid":"PBO:0080946"}


id: PBO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L","termid":"PBO:0034555"}


id: GO:0005320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein (obsolete GO:0005320)","synonyms":[{"name":"apolipoprotein","type":"exact"}],"termid":"GO:0005320"}


id: GO:0106187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to an oxidoreduction reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to oxidoreductase reactions (obsolete GO:0106187)","secondary_identifiers":["EC:7.1.1.-"],"termid":"GO:0106187"}


id: GO:0021659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 3. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 structural organization","synonyms":[{"name":"rhombomere 3 structural organisation","type":"exact"}],"termid":"GO:0021659"}


id: GO:0042611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC alpha chain and, in most cases, either an MHC class II beta chain or an invariant beta2-microglobin chain, and with or without a bound peptide, lipid, or polysaccharide antigen.","definition_xrefs":["GOC:jl","ISBN:0781735149","PMID:16153240","GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MHC protein complex","termid":"GO:0042611"}


id: PBO:0030547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_valine_import","termid":"PBO:0030547"}


id: GO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of exons from two different primary transcripts of messenger RNA (mRNA) via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["GOC:krc","PMID:18458335","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA trans splicing, via spliceosome","synonyms":[{"name":"nuclear mRNA trans splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA trans splicing, via spliceosome","type":"exact"}],"termid":"GO:0000365"}


id: PBO:0027712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_swollen,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0027712"}


id: PBO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tre1 family protein, involved in vacuolar protein degradation (predicted)","termid":"PBO:0003244"}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: PBO:0075628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein pseudogene 1","termid":"PBO:0075628"}


id: PATO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000782 defensive function value (obsolete PATO:0000782)","termid":"PATO:0000782"}


id: GO:0106266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trihydroxyphenylhexan-1-one + chloride + FADH2 + O2 = (3-chloro-2,4,6-trihydroxyphenyl)hexan-1-one + FAD + H+ + 2 H2O.","definition_xrefs":["PMID:20231486","RHEA:64356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-chloro THPH synthase activity","termid":"GO:0106266"}


id: GO:0070004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of C- or N-terminal peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0140096","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}


id: GO:0015188
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98884,106091],"is_not":false,"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-isoleucine from one side of a membrane to the other. L-isoleucine is (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-isoleucine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015188","terms_by_termid":{"GO:0015188":null}}


id: GO:0001179
data:
  {"annotated_genes":["SJAG_00202"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78748],"is_not":false,"summary":null,"term":"GO:0001179"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase I transcription factor, a protein required to initiate or regulate transcription by RNA polymerase I.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00202":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase I transcription factor binding","type":"broad"}],"termid":"GO:0001179","terms_by_termid":{"GO:0001179":null}}


id: GO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals) and an RSF1 homolog. It mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In mammals, RSF is involved in regulation of transcription from RNA polymerase II promoters).","definition_xrefs":["PMID:12972596","PMID:15284901","PMID:16568949","GOC:krc","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"RSF complex","synonyms":[{"name":"remodeling and spacing factor complex","type":"exact"}],"termid":"GO:0031213"}


id: PBO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0018000"}


id: GO:0007077
data:
  {"annotated_genes":["SJAG_00680","SJAG_04578","SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106527],"is_not":false,"summary":null,"term":"GO:0007077"},{"annotations":[99746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[89941,99749],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process in which the controlled partial or complete breakdown of the nuclear membranes during occurs during mitosis.","definition_xrefs":["GOC:bf","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane disassembly","termid":"GO:0051081"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEB","type":"broad"},{"name":"local NEB","type":"broad"},{"name":"mitotic nuclear envelope breakdown","type":"exact"},{"name":"mitotic nuclear envelope catabolism","type":"related"},{"name":"mitotic nuclear envelope degradation","type":"related"},{"name":"mitotic nuclear envelope disassembly","type":"related"},{"name":"nuclear envelope breakdown","type":"broad"}],"termid":"GO:0007077","terms_by_termid":{"GO:0007077":null,"GO:0140516":null,"GO:1905557":null}}


id: PBO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase (predicted)","termid":"PBO:0003086"}


id: PBO:0077827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member F","termid":"PBO:0077827"}


id: PBO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0011185"}


id: PBO:0075517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle apparatus coiled-coil protein 1","termid":"PBO:0075517"}


id: PBO:0069802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1088, pseudogene","termid":"PBO:0069802"}


id: PR:P50999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02432","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit delta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.06","secondary_identifiers":["UniProtKB:P50999"],"synonyms":[{"name":"CCT-delta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT4","type":"exact"},{"name":"TCP-1-delta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50999"}


id: GO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichloroaniline + malonyl-CoA = N-(3,4-dichlorophenyl)malonamate + CoA.","definition_xrefs":["RHEA:21060","EC:2.3.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"3,4-dichloroaniline N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04050","MetaCyc:2.3.1.114-RXN"],"synonyms":[{"name":"malonyl-CoA:3,4-dichloroaniline N-malonyltransferase activity","type":"related"}],"termid":"GO:0047163"}


id: GO:0075307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of conidium formation, a process of producing non-motile spores, called conidia, via mitotic asexual reproduction in higher fungi. Conidia are haploid cells genetically identical to their haploid parent. They are produced by conversion of hyphal elements, or are borne on sporogenous cells on or within specialized structures termed conidiophores, and participate in dispersal of the fungus.","definition_xrefs":["GOC:di","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of sporulation","termid":"GO:0043938"},{"relation_name":"is_a","term_name":"regulation of conidium formation","termid":"GO:0075306"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"conidium formation","termid":"GO:0048315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of conidium formation","termid":"GO:0075307"}


id: PBO:0005475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20 family (predicted)","termid":"PBO:0005475"}


id: GO:0038175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the SREBP signaling pathway in response to an increase in oxygen levels.","definition_xrefs":["GOC:al","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of SREBP signaling pathway","termid":"GO:2000639"},{"relation_name":"part_of","term_name":"cellular response to increased oxygen levels","termid":"GO:0036295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SREBP signaling pathway in response to increased oxygen levels","synonyms":[{"name":"negative regulation of SREBP-mediated signaling pathway in presence of oxygen","type":"related"},{"name":"negative regulation of SREBP-mediated signaling pathway in response to increased oxygen levels","type":"exact"}],"termid":"GO:0038175"}


id: GO:1904749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleolus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24415760","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to nucleolus","termid":"GO:1902570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleolus","synonyms":[{"name":"regulation of protein localisation in nucleolus","type":"exact"},{"name":"regulation of protein localisation to nucleolus","type":"exact"},{"name":"regulation of protein localization in nucleolus","type":"exact"}],"termid":"GO:1904749"}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: GO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}


id: PBO:0076187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 2","termid":"PBO:0076187"}


id: PBO:0065598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 14","termid":"PBO:0065598"}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: PBO:0073920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 9","termid":"PBO:0073920"}


id: GO:1904585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:20805360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to putrescine","synonyms":[{"name":"response to 1,4-Butanediamine","type":"exact"},{"name":"response to 1,4-Diaminobutane","type":"exact"},{"name":"response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904585"}


id: GO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al","PMID:20944394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-valine transmembrane import into vacuole","termid":"GO:0110101"}


id: GO:0043541
data:
  {"annotated_genes":["SJAG_00924","SJAG_03311","SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94438,94771,99649],"is_not":false,"summary":null,"term":"GO:0043541"}]},"cv_name":"cellular_component","definition":"A multienzyme, heterooligomeric complex involved in dolichyl-linked oligosaccharide synthesis. In yeast the complex is composed of Alg7p, which catalyzes the first step (GlcNAc1-PP-Dol from dolichol-phosphate and UDP-GlcNAc), and Alg13p plus Alg14p, the catalytic and anchoring subunits respectively, which together catalyze the second step (GlcNAc2-PP-dolichol from GlcNAc1-PP-Dol and UDP-GlcNAc) of dolichyl-linked oligosaccharide synthesis.","definition_xrefs":["GOC:rn","PMID:19129246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00924":null,"SJAG_03311":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0032991","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043541","terms_by_termid":{"GO:0043541":null}}


id: GO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of septins and associated proteins to form a tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring assembly","termid":"GO:0000921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}


id: GO:0010847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process the modulates the frequency, rate or extent of chromatin assembly. Chromatin assembly is the assembly of DNA, histone proteins, and other associated proteins into chromatin structure, beginning with the formation of the basic unit, the nucleosome, followed by organization of the nucleosomes into higher order structures, ultimately giving rise to a complex organization of specific domains within the nucleus.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin assembly (obsolete GO:0010847)","termid":"GO:0010847"}


id: GO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane repolarization","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of atrial cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0060372"}


id: GO:0018106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0035","RESID:AA0036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine phosphorylation","termid":"GO:0018106"}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: GO:2000007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metanephric comma-shaped body morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000006"},{"relation_name":"negatively_regulates","term_name":"metanephric comma-shaped body morphogenesis","termid":"GO:0072278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000007"}


id: PBO:0047058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 118 member B","termid":"PBO:0047058"}


id: GO:0018094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of glycyl units covalently bound to the gamma carboxyl group peptidyl-glutamic acid.","definition_xrefs":["RESID:AA0201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyglycylation","termid":"GO:0018094"}


id: GO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-1 (MAML1); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["CORUM:2949","PMID:16510869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML1-RBP-Jkappa- ICN1 complex","synonyms":[{"name":"MAML1-CSL-ICN1","type":"exact"},{"name":"MAML1-CSL-Notch1 complex","type":"exact"},{"name":"MAML1-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0002193"}


id: PBO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThrE amino acid transmembrane transporter family protein","termid":"PBO:0036303"}


id: PBO:0058854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8083","termid":"PBO:0058854"}


id: GO:0140516
data:
  {"annotated_genes":["SJAG_00840"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99746],"is_not":false,"summary":null,"term":"GO:0140516"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process in which the controlled breakdown of the nuclear pores occurs during open or closed mitosis.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore organization","termid":"GO:0006999"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"},{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"mitotic nuclear pore complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pore complex disassembly during mitosis","type":"exact"}],"termid":"GO:0140516","terms_by_termid":{"GO:0140516":null}}


id: PBO:0065664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N","termid":"PBO:0065664"}


id: PBO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 42","termid":"PBO:0071201"}


id: PBO:0072657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 9","termid":"PBO:0072657"}


id: PBO:0068247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 4","termid":"PBO:0068247"}


id: PBO:0089308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase Pdx3","termid":"PBO:0089308"}


id: PBO:0027241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_binucleate_aseptate_cell","termid":"PBO:0027241"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: GO:0010547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the thylakoid membrane in the context of a normal process.","definition_xrefs":["GOC:dph","GOC:tb","PMID:17416733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid membrane organization","termid":"GO:0010027"},{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"thylakoid membrane disassembly","synonyms":[{"name":"thylakoid membrane degradation","type":"exact"}],"termid":"GO:0010547"}


id: PR:P78958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glyceraldehyde-3-phosphate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03431","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.11","secondary_identifiers":["UniProtKB:P78958"],"synonyms":[{"name":"GAPDH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GAPDH","type":"exact"}],"termid":"PR:P78958"}


id: PBO:0018100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase Pan5 (predicted)","termid":"PBO:0018100"}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0067385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 489, pseudogene","termid":"PBO:0067385"}


id: PBO:0063365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 5","termid":"PBO:0063365"}


id: PBO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 21","termid":"PBO:0060001"}


id: PATO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of temperature","synonyms":[{"name":"low variability of temperature","type":"exact"}],"termid":"PATO:0001307"}


id: PBO:0056981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30a","termid":"PBO:0056981"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: PBO:0081224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 4","termid":"PBO:0081224"}


id: PBO:0074232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC47A1 pseudogene 1","termid":"PBO:0074232"}


id: GO:1990703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","GOC:bhm","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi medial cisterna membrane (obsolete GO:1990703)","synonyms":[{"name":"integral component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990703"}


id: PBO:0072930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 10","termid":"PBO:0072930"}


id: PBO:0075627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein","termid":"PBO:0075627"}


id: GO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoacetic acid, 3-oxobutanoic acid; the empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["Wikipedia:Acetoacetic_acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetoacetic acid metabolic process","synonyms":[{"name":"3-oxobutanoate metabolic process","type":"exact"},{"name":"3-oxobutanoate metabolism","type":"exact"},{"name":"3-oxobutanoic acid metabolic process","type":"exact"},{"name":"3-oxobutanoic acid metabolism","type":"exact"},{"name":"acetoacetate metabolic process","type":"exact"},{"name":"acetoacetate metabolism","type":"exact"},{"name":"acetoacetic acid metabolism","type":"exact"},{"name":"beta ketobutyric acid metabolic process","type":"exact"},{"name":"beta ketobutyric acid metabolism","type":"exact"},{"name":"beta-ketobutyric acid metabolic process","type":"exact"},{"name":"beta-ketobutyric acid metabolism","type":"exact"},{"name":"diacetic acid metabolic process","type":"exact"},{"name":"diacetic acid metabolism","type":"exact"}],"termid":"GO:0043438"}


id: PBO:0074706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 72","termid":"PBO:0074706"}


id: GO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in vacuole","termid":"GO:0072667"}


id: PBO:0108509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in pyrimidine or lysine metabolism","termid":"PBO:0108509"}


id: GO:0045482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + trichodiene.","definition_xrefs":["RHEA:12052","EC:4.2.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"trichodiene synthase activity","secondary_identifiers":["MetaCyc:TRICHODIENE-SYNTHASE-RXN","KEGG_REACTION:R02306"],"synonyms":[{"name":"sesquiterpene cyclase activity","type":"broad"},{"name":"trans,trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, trichodiene-forming)","type":"related"},{"name":"trans,trans-farnesyl-diphosphate sesquiterpenoid-lyase activity","type":"related"},{"name":"trichodiene synthetase activity","type":"related"}],"termid":"GO:0045482"}


id: PBO:0063388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 5 pseudogene 2","termid":"PBO:0063388"}


id: GO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endothelin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17376402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelin receptor signaling pathway","termid":"GO:0086100"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endothelin receptor signaling pathway involved in heart process","synonyms":[{"name":"endothelin receptor signalling pathway involved in heart process","type":"exact"}],"termid":"GO:0086101"}


id: PBO:0038482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 7","termid":"PBO:0038482"}


id: PBO:0054335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1728","termid":"PBO:0054335"}


id: GO:0098764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis I cell cycle phase","termid":"GO:0098764"}


id: PBO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER unfolded protein response protein (predicted)","termid":"PBO:0003008"}


id: GO:0030892
data:
  {"annotated_genes":["SJAG_01067","SJAG_03418","SJAG_05019","SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83973,87039,103806,112901],"is_not":false,"summary":null,"term":"GO:0030892"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex.","definition_xrefs":["PMID:12750522","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01831":null,"SJAG_03418":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"mitotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034990"],"synonyms":[{"name":"nuclear mitotic cohesin complex","type":"related"}],"termid":"GO:0030892","terms_by_termid":{"GO:0030892":null}}


id: GO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the transcription of genes into mRNA in its host by directly inhibiting host RNA polymerase II activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25233083","GOC:sp","PMID:36144426","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host transcription","termid":"GO:0039653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA transcription via inhibition of RNA polymerase II activity","synonyms":[{"name":"inhibition of host RNA polymerase II activity by virus","type":"narrow"},{"name":"inhibition of host RNA polymerase II by virus","type":"exact"},{"name":"negative regulation by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity","type":"narrow"}],"termid":"GO:0039523"}


id: PBO:0083217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083217"}


id: PBO:0111831
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0111831"}


id: PBO:0068230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 1","termid":"PBO:0068230"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: PBO:0062886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovochymase 2","termid":"PBO:0062886"}


id: GO:1904713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-catenin destruction complex.","definition_xrefs":["PMID:22899650","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-catenin destruction complex binding","synonyms":[{"name":"23S APC complex binding","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex binding","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex binding","type":"exact"},{"name":"BDC binding","type":"exact"},{"name":"beta-catenin degradation complex binding","type":"exact"}],"termid":"GO:1904713"}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_03026","SJAG_03438","SJAG_04126","SJAG_01680","SJAG_01837","SJAG_04259","SJAG_01330","SJAG_00364","SJAG_01082","SJAG_04287","SJAG_02771","SJAG_03529","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110549,102373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[102677,112110,87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[112111,102678,85202,76907,110313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[102374,112717,97874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97409],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"O-succinyltransferase activity","termid":"GO:0016750"}


id: PBO:0013228
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penetrance","termid":"PBO:0013228"}


id: GO:0090123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.","definition_xrefs":["GOC:krc","GOC:tb","PMID:10521503","PMID:22809326","GOC:ascb_2009","PMID:29367433","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lysosomal glycocalyx","termid":"GO:0090123"}


id: GO:0015650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lactate (out) + H+ (out) = lactate (in) + H+ (in).","definition_xrefs":["TC:2.A.14.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transmembrane transporter activity","termid":"GO:0015129"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lactate:proton symporter activity","synonyms":[{"name":"lactate permease","type":"broad"},{"name":"lactate:hydrogen porter activity","type":"exact"},{"name":"lactate:hydrogen symporter activity","type":"exact"},{"name":"lactate:proton porter activity","type":"exact"}],"termid":"GO:0015650"}


id: PBO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: GO:0061704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a sucrose into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.","definition_xrefs":["PMID:15012287","GOC:glycolysis","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process from sucrose","termid":"GO:0061704"}


id: FYPO:0005811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the biogenesis of nuclear membrane that normally forms part of mitosis is abnormal.","definition_xrefs":["PomBase:mah","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear membrane biogenesis involved in mitosis","synonyms":[{"name":"abnormal membrane addition to the nuclear membrane during division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitosis during vegetative growth","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005811"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: PBO:0063701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGLS divergent transcript","termid":"PBO:0063701"}


id: PBO:0079970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 8","termid":"PBO:0079970"}


id: PBO:0052966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE1 type transposase domain containing 1","termid":"PBO:0052966"}


id: MOD:01498
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01498"}


id: GO:0102419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: omega-hydroxy-C22:0-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-omega-hydroxy-C22:0-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate omega-OH-C22:0-CoA acyl transferase activity (obsolete GO:0102419)","termid":"GO:0102419"}


id: PBO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family phosphatidylinositol transporter (predicted)","termid":"PBO:0000476"}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: PBO:0036257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2 (predicted)","termid":"PBO:0036257"}


id: GO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + capsular polysaccharide(in) = ADP + phosphate + capsular polysaccharide(out).","definition_xrefs":["EC:7.6.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type capsular-polysaccharide transporter activity","secondary_identifiers":["MetaCyc:3.6.3.38-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (capsular-polysaccharide-exporting)","type":"related"},{"name":"ATP-dependent capsular-polysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled capsular-polysaccharide transporter activity","type":"related"},{"name":"capsular-polysaccharide ABC transporter","type":"narrow"},{"name":"capsular-polysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015436"}


id: FYPO:0003196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to iron ion starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"altered RNA level during cellular response to iron ion starvation","synonyms":[{"name":"abnormal RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during cellular response to iron starvation","type":"exact"},{"name":"altered RNA level during iron starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to iron ion starvation","type":"exact"},{"name":"altered transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0003196"}


id: GO:0060446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of branches in the open tracheal system are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in open tracheal system development","termid":"GO:0060446"}


id: GO:1904358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance via telomere lengthening.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:nc","PMID:23959892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomere lengthening","termid":"GO:1904356"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via telomere lengthening","synonyms":[{"name":"activation of telomere maintenance via telomere lengthening","type":"narrow"},{"name":"up regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"up-regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"upregulation of telomere maintenance via telomere lengthening","type":"exact"}],"termid":"GO:1904358"}


id: PBO:0078754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61A","termid":"PBO:0078754"}


id: GO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formaldehyde + glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["EC:1.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete formaldehyde dehydrogenase (glutathione) activity (obsolete GO:0004327)","synonyms":[{"name":"formaldehyde dehydrogenase (glutathione) activity","type":"exact"}],"termid":"GO:0004327"}


id: PBO:0082564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone protein; required for the assembly of box H/ACA snoRNPs and thus for pre-rRNA processing; functions as an RNA mimic; forms a complex with Naf1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; homology with known Hsp90p cochaperones; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082564"}


id: GO:1904333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GO_REF:0000058","PMID:22761594","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of error-prone translesion synthesis","synonyms":[{"name":"activation of error-prone postreplication DNA repair","type":"related"},{"name":"activation of error-prone translesion synthesis","type":"narrow"},{"name":"activation of mutagenic PRR","type":"narrow"},{"name":"activation of mutagenic postreplication DNA repair","type":"related"},{"name":"positive regulation of error-prone postreplication DNA repair","type":"related"},{"name":"positive regulation of mutagenic PRR","type":"exact"},{"name":"positive regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone translesion synthesis","type":"exact"},{"name":"up regulation of mutagenic PRR","type":"exact"},{"name":"up regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone translesion synthesis","type":"exact"},{"name":"up-regulation of mutagenic PRR","type":"exact"},{"name":"up-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone translesion synthesis","type":"exact"},{"name":"upregulation of mutagenic PRR","type":"exact"},{"name":"upregulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904333"}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: GO:0032479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interferon type I production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of type I interferon production","synonyms":[{"name":"regulation of type I IFN production","type":"exact"}],"termid":"GO:0032479"}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing phosphate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: GO:0062098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["PMID:27258785","GOC:aruk","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed necrotic cell death","termid":"GO:0062098"}


id: PBO:0089105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein Mtf2","termid":"PBO:0089105"}


id: FYPO:0000684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on glycerol carbon source","synonyms":[{"name":"decreased growth on glycerol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on glycerol carbon source","type":"exact"},{"name":"reduced cell growth on glycerol carbon source","type":"exact"},{"name":"slow cell growth on glycerol carbon source","type":"narrow"}],"termid":"FYPO:0000684"}


id: PATO:0002533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A multipartite quality inhering in a bearer by virtue of the bearer being divided into two parts.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multipartite","termid":"PATO:0002510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite","termid":"PATO:0002533"}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: PBO:0074061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A38 pseudogene 1","termid":"PBO:0074061"}


id: PBO:0049815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 7","termid":"PBO:0049815"}


id: GO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.","definition_xrefs":["ISBN:0140514031","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"glyoxysome","secondary_identifiers":["Wikipedia:Glyoxysome"],"termid":"GO:0009514"}


id: PBO:0088777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron responsive transcriptional regulator, peptidase family","termid":"PBO:0088777"}


id: GO:0052244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in other organism involved in symbiotic interaction (obsolete GO:0052244)","synonyms":[{"name":"negative energy taxis in other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052244"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: PBO:0076296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope protein 1","termid":"PBO:0076296"}


id: GO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication by electrical coupling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication by electrical coupling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086044"}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97732],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: GO:1901653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptide","termid":"GO:1901653"}


id: RO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p is immediately causally upstream of q iff both (a) p immediately precedes q and (b) p is causally upstream of q. In addition, the output of p  must be an input of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_precedes","termid":"RO:0002090"},{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_upstream_of","termid":"RO:0002412"}


id: GO:0016319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mushroom body over time, from its formation to the mature structure. The mushroom body is composed of the prominent neuropil structures of the insect central brain, thought to be crucial for olfactory associated learning. These consist mainly of a bulbous calyx and tightly packaged arrays of thin parallel fibers of the Kenyon cells.","definition_xrefs":["PMID:8790424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mushroom body development","termid":"GO:0016319"}


id: PBO:0081225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMYM4 antisense RNA 1","termid":"PBO:0081225"}


id: PBO:0058092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4308","termid":"PBO:0058092"}


id: FYPO:0000511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished nuclear fusion during mating","synonyms":[{"name":"abolished nuclear fusion during conjugation","type":"exact"},{"name":"absent nuclear fusion during mating","type":"exact"},{"name":"karyogamy abolished","type":"exact"},{"name":"karyogamy involved in conjugation with cellular fusion abolished","type":"exact"},{"name":"nuclear fusion during mating abolished","type":"exact"},{"name":"nuclear fusion during mating: absent","type":"related"}],"termid":"FYPO:0000511"}


id: PBO:0040784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 1","termid":"PBO:0040784"}


id: PBO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family","termid":"PBO:0004383"}


id: GO:0017076
data:
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id: PR:Q9UUE7
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id: GO:0036156
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id: PBO:0078196
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id: PBO:0083897
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id: PBO:0063548
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id: PBO:0017966
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id: PBO:0029921
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id: GO:0004677
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id: GO:0045346
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MHC class II biosynthetic process","synonyms":[{"name":"regulation of MHC class II anabolism","type":"exact"},{"name":"regulation of MHC class II biosynthesis","type":"exact"},{"name":"regulation of MHC class II formation","type":"exact"},{"name":"regulation of MHC class II synthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045346"}


id: PBO:0062252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BS member 1 pseudogene","termid":"PBO:0062252"}


id: GO:1904502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipophagy.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:25383539","GOC:autophagy","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"regulates","term_name":"lipophagy","termid":"GO:0061724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of lipophagy","termid":"GO:1904502"}


id: PBO:0027063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0027063"}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["UniProtKB:Q9Y7Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: PR:O13831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.15","synonyms":[{"name":"Spom972h-trp2","type":"exact"}],"termid":"PR:O13831"}


id: PBO:0048814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 3","termid":"PBO:0048814"}


id: PBO:0030897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_regulation_phenotype_during_vegetative_growth","termid":"PBO:0030897"}


id: PATO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000250 spinal reflex (obsolete PATO:0000250)","termid":"PATO:0000250"}


id: PBO:0068855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 94, pseudogene","termid":"PBO:0068855"}


id: GO:0106049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cellular response to osmotic stress.","definition_xrefs":["PMID:10398679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to osmotic stress","termid":"GO:0047484"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"}


id: PBO:0091041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA complex subunit Tti2","termid":"PBO:0091041"}


id: PBO:0034135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_start_location","termid":"PBO:0034135"}


id: PBO:0057913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3616","termid":"PBO:0057913"}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: PBO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_taxon","termid":"PBO:0034237"}


id: PBO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit (predicted)","termid":"PBO:0005396"}


id: GO:0015072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.137"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase, class I, catalyst activity (obsolete GO:0015072)","synonyms":[{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"exact"}],"termid":"GO:0015072"}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:28526819","PMID:22301656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: PBO:0109195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1","termid":"PBO:0109195"}


id: MOD:00453
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent light form group.","definition_xrefs":["PubMed:11857757","Unimod:60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent light form (N-term & K)","synonyms":[{"name":"GIST-Quat","type":"related"},{"name":"Quaternary amine labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:00453"}


id: PBO:0029781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_abnormal_septum","termid":"PBO:0029781"}


id: PBO:0048406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest associated lncRNA 1","termid":"PBO:0048406"}


id: PBO:0074800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13E","termid":"PBO:0074800"}


id: GO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of a symbiont from an initial condition to a later condition, within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host (obsolete GO:0044132)","termid":"GO:0044132"}


id: PBO:0081493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF385D antisense RNA 1","termid":"PBO:0081493"}


id: FYPO:0001513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["GO:0000070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic sister chromatid segregation","synonyms":[{"name":"normal mitotic chromosome segregation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"exact"},{"name":"normal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"normal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001513"}


id: PBO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 2","termid":"PBO:0061290"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: FYPO:0000105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclosporin A. Cells stop growing (and may die) at a concentration of cyclosporin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cyclosporin A","synonyms":[{"name":"sensitive to cyclosporine","type":"exact"},{"name":"hypersensitive to cyclosporin A","type":"exact"},{"name":"sensitive to cyclosporin A during mitotic cell cycle","type":"related"},{"name":"sensitive to cyclosporin A during vegetative growth","type":"exact"}],"termid":"FYPO:0000105"}


id: GO:0032570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to progesterone","synonyms":[{"name":"response to progesterone stimulus","type":"exact"}],"termid":"GO:0032570"}


id: MOD:01906
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydromethionine.","definition_xrefs":["PubMed:18688235","PubMed:19775156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01906"}


id: PR:Q09711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neuronal calcium sensor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00114","PANTHER:PTHR23055:SF22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-binding protein NCS-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.04","secondary_identifiers":["UniProtKB:Q09711"],"synonyms":[{"name":"Spom972h-NCS1","type":"exact"}],"termid":"PR:Q09711"}


id: GO:0005506
data:
  {"annotated_genes":["SJAG_00827","SJAG_04743","SJAG_00309","SJAG_05311","SJAG_04297","SJAG_03862","SJAG_03225","SJAG_00642","SJAG_04016","SJAG_03943","SJAG_03509","SJAG_03018","SJAG_00792","SJAG_00717","SJAG_03222","SJAG_01418","SJAG_00532","SJAG_04913","SJAG_04054","SJAG_03658","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85795,87910,90171,94939,97611,99483,99872,100827,103445,103600,105932,107773,108491,108596,108855,110459,113388],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[109942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[96649,100803,97299,109943,89056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to an iron (Fe) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00532":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00792":null,"SJAG_00827":null,"SJAG_01418":null,"SJAG_03018":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03509":null,"SJAG_03658":null,"SJAG_03862":null,"SJAG_03943":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04297":null,"SJAG_04743":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0046872"],"is_obsolete":false,"name":"iron ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron binding","type":"exact"}],"termid":"GO:0005506","terms_by_termid":{"GO:0005506":null,"GO:0008198":null,"GO:0008199":null}}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: PBO:0055697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLLL and CFNLAS motif containing 1","termid":"PBO:0055697"}


id: GO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TAP complex.","definition_xrefs":["PMID:17947644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TAP complex binding","termid":"GO:0062061"}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["UniProtKB:O14244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: PBO:0059642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 8","termid":"PBO:0059642"}


id: PBO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Gfh1","termid":"PBO:0004702"}


id: GO:1905856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentose-phosphate shunt.","definition_xrefs":["PMID:19015259","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentose-phosphate shunt","termid":"GO:0043456"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0005975","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pentose-phosphate shunt","termid":"GO:1905856"}


id: PBO:0049205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 5","termid":"PBO:0049205"}


id: GO:0009036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates and 3' hydroxyls. Cleavage is dependent on the presence in the DNA of a specific recognition site; cleavage occurs at or very near this recognition site.","definition_xrefs":["PMID:12654995","EC:3.1.21.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.4-RXN"],"synonyms":[{"name":"type II restriction enzyme activity","type":"exact"}],"termid":"GO:0009036"}


id: GO:0033151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["GOC:add","ISBN:0781735149","ISBN:0781700221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"V(D)J recombination","secondary_identifiers":["Wikipedia:V(D)J_recombination"],"synonyms":[{"name":"V(D)J joining","type":"exact"},{"name":"V-D-J joining","type":"exact"},{"name":"V-D-J recombination","type":"exact"},{"name":"V-J joining","type":"exact"},{"name":"V-J recombination","type":"exact"}],"termid":"GO:0033151"}


id: PBO:0082760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis","termid":"PBO:0082760"}


id: GO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + AMP + diphosphate + perillyl-CoA.","definition_xrefs":["KEGG_REACTION:R06368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"perillic acid-CoA ligase (AMP-forming) activity","synonyms":[{"name":"perillic acid:CoA ligase (AMP-forming) activity","type":"exact"},{"name":"perillyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052686"}


id: GO:0039653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts transcription of genes into mRNA in its host. For example, symbiont proteins can interfere with host RNA polymerase or with transcription factors. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host transcription","termid":"GO:0052026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host transcription","synonyms":[{"name":"host transcription shut-off","type":"exact"},{"name":"host transcription shutoff by virus","type":"narrow"},{"name":"suppression by virus of host DNA-dependent transcription","type":"narrow"},{"name":"suppression by virus of host transcription","type":"narrow"}],"termid":"GO:0039653"}


id: PBO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious","termid":"PBO:0000223"}


id: GO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation via MHC class Ib","synonyms":[{"name":"activation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"stimulation of antigen processing and presentation via MHC class Ib","type":"narrow"},{"name":"up regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"up-regulation of antigen processing and presentation via MHC class Ib","type":"exact"},{"name":"upregulation of antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002594"}


id: PBO:0111850
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family","termid":"PBO:0111850"}


id: PR:Q9P7K0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04500","PANTHER:PTHR10898:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.05","secondary_identifiers":["UniProtKB:Q9P7K0"],"synonyms":[{"name":"Spom972h-TIMM9","type":"exact"}],"termid":"PR:Q9P7K0"}


id: GO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + hydrogen selenide = AMP + 3 H+ + phosphate + selenophosphorate.","definition_xrefs":["EC:2.7.9.3","RHEA:18737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"selenide, water dikinase activity","secondary_identifiers":["MetaCyc:2.7.9.3-RXN","KEGG_REACTION:R03595","Reactome:R-HSA-8959510","UM-BBD_reactionID:r0833"],"synonyms":[{"name":"ATP:selenide, water phosphotransferase activity","type":"related"},{"name":"selenide,water dikinase activity","type":"related"},{"name":"selenium donor protein activity","type":"related"},{"name":"selenophosphate synthase activity","type":"exact"},{"name":"selenophosphate synthetase activity","type":"related"}],"termid":"GO:0004756"}


id: GO:1904914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:rph","GOC:BHF","GOC:TermGenie","PMID:26586433","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"negatively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"down regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"inhibition of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904914"}


id: GO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).","definition_xrefs":["PMID:16188985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity","secondary_identifiers":["GO:0039515","VZ:784"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"inhibition of host JAK activity by virus","type":"narrow"},{"name":"negative regulation by virus of host JAK","type":"narrow"},{"name":"negative regulation by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of JAK1 activity","type":"narrow"},{"name":"suppression by virus of host JAK1 activity","type":"narrow"},{"name":"suppression by virus of tyrosine phosphorylation of host STAT protein","type":"narrow"},{"name":"viral inhibition of tyrosine phosphorylation of host STAT protein","type":"narrow"}],"termid":"GO:0039576"}


id: FYPO:0005764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions containing G-quartet (G4) motifs.","definition_xrefs":["PMID:25471935","PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork pausing at G4 motif","synonyms":[{"name":"increased replication fork pausing at G-quadruplex","type":"exact"},{"name":"increased replication fork pausing at G-quartet","type":"exact"},{"name":"increased replication fork pausing at G4 motif during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at G4 motif during vegetative growth","type":"exact"}],"termid":"FYPO:0005764"}


id: GO:1900947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of isoprene biosynthetic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"regulation of hemiterpene biosynthesis","type":"exact"},{"name":"regulation of hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:1900947"}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: GO:0051891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardioblast differentiation","synonyms":[{"name":"activation of cardioblast differentiation","type":"narrow"},{"name":"stimulation of cardioblast differentiation","type":"narrow"},{"name":"up regulation of cardioblast differentiation","type":"exact"},{"name":"up-regulation of cardioblast differentiation","type":"exact"},{"name":"upregulation of cardioblast differentiation","type":"exact"}],"termid":"GO:0051891"}


id: GO:1990233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["PMID:16540464","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}


id: GO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"fatty acid metabolic process","termid":"GO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid metabolic process","synonyms":[{"name":"activation of fatty acid metabolic process","type":"narrow"},{"name":"positive regulation of fatty acid metabolism","type":"exact"},{"name":"stimulation of fatty acid metabolic process","type":"narrow"},{"name":"up regulation of fatty acid metabolic process","type":"exact"},{"name":"up-regulation of fatty acid metabolic process","type":"exact"},{"name":"upregulation of fatty acid metabolic process","type":"exact"}],"termid":"GO:0045923"}


id: GO:1901705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-isoleucine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"isoleucine biosynthetic process","termid":"GO:0009097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-isoleucine biosynthetic process","synonyms":[{"name":"L-isoleucine anabolism","type":"exact"},{"name":"L-isoleucine biosynthesis","type":"exact"},{"name":"L-isoleucine formation","type":"exact"},{"name":"L-isoleucine synthesis","type":"exact"}],"termid":"GO:1901705"}


id: PBO:0045541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 1 like","termid":"PBO:0045541"}


id: GO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which transitional stage B cells acquire the specialized features of mature B cells in the spleen.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation","synonyms":[{"name":"mature B lymphocyte differentiation","type":"exact"},{"name":"mature B-cell differentiation","type":"exact"},{"name":"mature B-lymphocyte differentiation","type":"exact"},{"name":"mature cell development","type":"related"}],"termid":"GO:0002335"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: GO:0035729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hepatocyte growth factor stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hepatocyte growth factor","termid":"GO:0035728"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"cellular response to HGF stimulus","type":"exact"}],"termid":"GO:0035729"}


id: PBO:0079219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tau tubulin kinase 1","termid":"PBO:0079219"}


id: GO:1901634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle membrane organization","synonyms":[{"name":"activation of SLMV biogenesis","type":"narrow"},{"name":"activation of synaptic vesicle membrane organisation","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization","type":"narrow"},{"name":"activation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"positive regulation of SLMV biogenesis","type":"narrow"},{"name":"positive regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"positive regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up regulation of SLMV biogenesis","type":"narrow"},{"name":"up regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"up-regulation of SLMV biogenesis","type":"narrow"},{"name":"up-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"up-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"upregulation of SLMV biogenesis","type":"narrow"},{"name":"upregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"upregulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901634"}


id: GO:1990641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of iron ion.","definition_xrefs":["PMID:16208485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion starvation","termid":"GO:1990641"}


id: PBO:0109128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, EGF-CFC family member 3","termid":"PBO:0109128"}


id: PR:Q10492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnn1 gene.","definition_xrefs":["UniProtKB:Q10492","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.02","synonyms":[{"name":"Spom972h-pnn1","type":"exact"}],"termid":"PR:Q10492"}


id: GO:1905749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"}


id: PBO:0065888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35 antisense RNA 1","termid":"PBO:0065888"}


id: PBO:0055230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2656","termid":"PBO:0055230"}


id: PR:Q9Y7T0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04469","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C63.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.03","secondary_identifiers":["UniProtKB:Q9Y7T0"],"synonyms":[{"name":"Spom972h-DNAJC11","type":"exact"}],"termid":"PR:Q9Y7T0"}


id: GO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a columna/cuboidal epithelial cell of the intestine to attain its fully functional state. A columnar/cuboidal epithelial cell of the intestine mature as they migrate from the intestinal crypt to the villus.","definition_xrefs":["GOC:dph","PMID:18824147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell maturation","termid":"GO:0060574"}


id: GO:0098795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A posttranscriptional gene silencing pathway that involves the cleavage of mRNAs in a non-gene-specific manner.","definition_xrefs":["PMID:15009896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"global gene silencing by mRNA cleavage","secondary_identifiers":["GO:0030423"],"synonyms":[{"name":"RNA interference, targeting of mRNA for destruction","type":"related"},{"name":"gene silencing by mRNA cleavage","type":"broad"},{"name":"mRNA cleavage involved in gene silencing","type":"broad"},{"name":"mRNA destabilization-mediated gene silencing","type":"related"},{"name":"targeting of mRNA for destruction involved in RNA interference","type":"related"}],"termid":"GO:0098795"}


id: PBO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelium and lymphocyte associated ASCH domain 1","termid":"PBO:0046383"}


id: GO:0017196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal methionine of proteins to form the derivative N-acetyl-L-methionine.","definition_xrefs":["RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-methionine modification","termid":"GO:0018206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}


id: FYPO:0000794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glycerol dehydrogenase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished glycerol dehydrogenase activity","synonyms":[{"name":"glycerol dehydrogenase activity abolished","type":"exact"}],"termid":"FYPO:0000794"}


id: PBO:0084564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-embedded ubiquitin-protein ligase and retrotranslocase; ER and inner nuclear membrane localized RING-CH domain E3 ligase involved in ER-associated protein degradation (ERAD); aids Cdc48p in the extraction of faulty membrane proteins; targets misfolded cytosolic/nucleoplasmic domains of soluble and membrane embedded proteins (ERAD-C) and Sbh2p, a transmembrane domain-containing substrate (ERAD-M); C-terminal element, conserved in human ortholog MARCH6, determines substrate selectivity","termid":"PBO:0084564"}


id: GO:1902819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethyl acetate.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:16013377","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"ethyl acetate metabolic process","termid":"GO:1902818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate biosynthetic process","synonyms":[{"name":"ethyl acetate anabolism","type":"exact"},{"name":"ethyl acetate biosynthesis","type":"exact"},{"name":"ethyl acetate formation","type":"exact"},{"name":"ethyl acetate synthesis","type":"exact"},{"name":"ethyl ethanoate biosynthetic process","type":"exact"}],"termid":"GO:1902819"}


id: PBO:0059085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 homolog, regulator of endosome-to-Golgi trafficking","termid":"PBO:0059085"}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-octaprenyl-6-methoxyphenol + O2 + 4 H+ = 2-octaprenyl-6-methoxy-1,4-benzoquinol + H2O.","definition_xrefs":["RHEA:29407","PMID:4572721","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: PBO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 14","termid":"PBO:0048830"}


id: PBO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1G2 antisense RNA 1","termid":"PBO:0039649"}


id: PBO:0069011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 255, pseudogene","termid":"PBO:0069011"}


id: PBO:0077565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 271","termid":"PBO:0077565"}


id: PBO:0028455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_re-entry_into_mitotic_cell_cycle_during_recovery_from_stationary_phase","termid":"PBO:0028455"}


id: PBO:0056811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B pseudogene 1","termid":"PBO:0056811"}


id: PBO:0026734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0026734"}


id: GO:0007089
data:
  {"annotated_genes":["SJAG_01825","SJAG_03591","SJAG_02404","SJAG_01210","SJAG_03681","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87846,97702,102028,104958,111384,111952],"is_not":false,"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"A cell cycle process by which a cell commits to entering S phase via a positive feedback mechanism between the regulation of transcription and G1 CDK activity.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G1/S transition of mitotic cell cycle","termid":"GO:1900087"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02404":null,"SJAG_03591":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"traversing start control point of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000081"],"termid":"GO:0007089","terms_by_termid":{"GO:0007089":null}}


id: GO:0021728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior reticular formation over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:curators","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior reticular formation development","termid":"GO:0021728"}


id: PR:O94282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic tRNA 2-thiolation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03335","PANTHER:PTHR11807:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.03","secondary_identifiers":["UniProtKB:O94282"],"synonyms":[{"name":"Spom972h-CTU1","type":"exact"},{"name":"cytoplasmic tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94282"}


id: PBO:0031328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cisplatin","termid":"PBO:0031328"}


id: GO:0033357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-arabinose, arabino-pentose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose biosynthetic process","termid":"GO:0019567"},{"relation_name":"is_a","term_name":"L-arabinose metabolic process","termid":"GO:0046373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-arabinose biosynthetic process","synonyms":[{"name":"L-arabinose anabolism","type":"exact"},{"name":"L-arabinose biosynthesis","type":"exact"},{"name":"L-arabinose formation","type":"exact"},{"name":"L-arabinose synthesis","type":"exact"}],"termid":"GO:0033357"}


id: GO:0014860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.","definition_xrefs":["GOC:mtg_muscle","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter secretion involved in regulation of skeletal muscle contraction","synonyms":[{"name":"neurotransmitter secretion involved in control of skeletal muscle contraction","type":"exact"}],"termid":"GO:0014860"}


id: PBO:0006203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_product","termid":"PBO:0006203"}


id: PBO:0063063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PANK2 antisense RNA 1","termid":"PBO:0063063"}


id: PBO:0057722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-7","termid":"PBO:0057722"}


id: PBO:0079110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2","termid":"PBO:0079110"}


id: PBO:0017849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase Fah1 (predicted)","termid":"PBO:0017849"}


id: GO:0009202
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009202","terms_by_termid":{"GO:0009216":null}}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: GO:1905770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesodermal cell differentiation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","PMID:23765923","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesodermal cell differentiation","synonyms":[{"name":"regulation of mesoderm cell differentiation","type":"exact"}],"termid":"GO:1905770"}


id: GO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2, the adaptor protein SHC and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:7798267","GOC:mah","PMID:8940013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"EGFR-Shc-Grb2-Sos complex","termid":"GO:0070621"}


id: FYPO:0004945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of nigericin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to nigericin","synonyms":[{"name":"resistance to nigericin during mitotic cell cycle","type":"related"},{"name":"resistance to nigericin during vegetative growth","type":"exact"},{"name":"resistant to nigericin","type":"exact"}],"termid":"FYPO:0004945"}


id: GO:0015127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bilirubin from one side of a membrane to the other. Bilirubin is a linear tetrapyrrole produced in the reticuloendothelial system from biliverdin and transported to the liver as a complex with serum albumin. In the liver, bilirubin is converted to bilirubin bisglucuronide, which is excreted in the bile.","definition_xrefs":["ISBN:0198547684","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"bilirubin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5679041","Reactome:R-HSA-9661417","Reactome:R-HSA-5679031"],"termid":"GO:0015127"}


id: PBO:0059974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 19","termid":"PBO:0059974"}


id: GO:0032088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.","definition_xrefs":["GOC:rl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"negative regulation of NF-kappaB transcription factor activity","synonyms":[{"name":"NF-kappaB inhibitor","type":"related"},{"name":"inhibition of NF-kappaB transcription factor","type":"exact"}],"termid":"GO:0032088"}


id: GO:1990077
data:
  {"annotated_genes":["SJAG_02627","SJAG_04994"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95497,101383],"is_not":false,"summary":null,"term":"GO:1990077"}]},"cv_name":"cellular_component","definition":"Any of a family of protein complexes that form at the origin of replication or stalled replication forks and function in replication primer synthesis in all organisms. Early complexes initiate double-stranded DNA unwinding. The core unit consists of a replicative helicase and a primase. The helicase further unwinds the DNA and recruits the polymerase machinery. The primase synthesizes RNA primers that act as templates for complementary stand replication by the polymerase machinery. The primosome contains a number of associated proteins and protein complexes and contributes to the processes of replication initiation, lagging strand elongation, and replication restart.","definition_xrefs":["GOC:mah","PMID:21856207","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"replisome","termid":"GO:0030894"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02627":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"primosome complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"primosome","type":"exact"}],"termid":"GO:1990077","terms_by_termid":{"GO:1990077":null}}


id: FYPO:0001894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more or fewer than four spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with more or fewer than four spores","type":"exact"},{"name":"abnormal spore number","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more or fewer than four spores","type":"exact"}],"termid":"FYPO:0001894"}


id: GO:0060826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060826)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060826"}


id: GO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"vascular endothelial growth factor receptor signaling pathway","termid":"GO:0048010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of vascular endothelial growth factor receptor signaling pathway","synonyms":[{"name":"regulation of VEGF receptor signaling pathway","type":"exact"},{"name":"regulation of VEGF receptor signalling pathway","type":"exact"},{"name":"regulation of vascular endothelial growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0030947"}


id: PATO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's undergoing unprogrammed cell death.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Necrotic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotic","termid":"PATO:0000647"}


id: FYPO:0005008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur.","definition_xrefs":["PomBase:mah","PMID:22976295"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005008)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005008"}


id: PR:O14276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fyv7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fyv7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.07","synonyms":[{"name":"Spom972h-fyv7","type":"exact"}],"termid":"PR:O14276"}


id: PBO:0069369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 629, pseudogene","termid":"PBO:0069369"}


id: GO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled receptor activity (obsolete GO:0004928)","synonyms":[{"name":"frizzled receptor activity","type":"exact"}],"termid":"GO:0004928"}


id: PBO:0040613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR/IMD domain containing adaptor protein 2 like 2","termid":"PBO:0040613"}


id: PBO:0076190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 5","termid":"PBO:0076190"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22995177","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: PBO:0043230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 2","termid":"PBO:0043230"}


id: PBO:0065445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMC3 interacting protein","termid":"PBO:0065445"}


id: PBO:0077571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM276-ZFTRAF1 readthrough","termid":"PBO:0077571"}


id: GO:0060230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipoprotein lipase, an enzyme that catalyzes of the hydrolysis of a lipid within a lipoprotein.","definition_xrefs":["GOC:BHF","PMID:10727238","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activator activity","termid":"GO:0060229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"lipoprotein lipase activator activity","termid":"GO:0060230"}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: GO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host nitric oxide production (obsolete GO:0052063)","synonyms":[{"name":"activation by organism of defense-related host NO production","type":"exact"},{"name":"activation by organism of defense-related host nitric oxide production","type":"exact"},{"name":"activation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"induction by organism of defense-related host NO production","type":"exact"},{"name":"induction by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"related"},{"name":"positive regulation by organism of defense-related host NO production","type":"related"},{"name":"positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"stimulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up-regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"upregulation by symbiont of defense-related host nitric oxide production","type":"related"}],"termid":"GO:0052063"}


id: GO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cellular spore derived from the products of mitosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"},{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a cellular spore","synonyms":[{"name":"asexual reproduction resulting in the formation of a cellular spore","type":"exact"},{"name":"asexual sporulation resulting in the formation of a viable spore","type":"broad"}],"termid":"GO:0043936"}


id: PBO:0073719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src like adaptor","termid":"PBO:0073719"}


id: PBO:0084265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; EMP46 has a paralog, EMP47, that arose from the whole genome duplication","termid":"PBO:0084265"}


id: PBO:0028091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_glucose_starvation","termid":"PBO:0028091"}


id: PBO:0082305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0082305"}


id: PBO:0058225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4515","termid":"PBO:0058225"}


id: PBO:0035827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035827"}


id: PBO:0082111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetolactate synthase; catalyses the first common step in isoleucine and valine biosynthesis and is the target of several classes of inhibitors, localizes to the mitochondria; expression of the gene is under general amino acid control","termid":"PBO:0082111"}


id: PBO:0057735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1323","termid":"PBO:0057735"}


id: FYPO:0000002
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_00993:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00993","name":"byr1delta","uniquename":"SJAG_00993:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01181:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01181","name":"pek1delta","uniquename":"SJAG_01181:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01718:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01718","name":"byr2delta","uniquename":"SJAG_01718:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02342:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02342","name":"wis1delta","uniquename":"SJAG_02342:allele-1"},"SJAG_02379:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02379","name":"gap1delta","uniquename":"SJAG_02379:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02486:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02486","name":"ste6delta","uniquename":"SJAG_02486:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02695:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02695","name":"tip1delta","uniquename":"SJAG_02695:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic 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id: GO:0044379
data:
  {"annotated_genes":["SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103226],"is_not":false,"summary":null,"term":"GO:0044379"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, an actin cortical patch.","definition_xrefs":["PMID:21620704","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:0044379","terms_by_termid":{"GO:0044379":null}}


id: GO:0006692
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id: PBO:0052643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 11","termid":"PBO:0052643"}


id: PBO:0078087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 4","termid":"PBO:0078087"}


id: PATO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality of having decreased odor.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"odorous","termid":"PATO:0001331"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased odor","termid":"PATO:0001892"}


id: PBO:0082053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease specific for poly-A RNAs; has a domain similar to a magnesium-dependent endonuclease motif in mRNA deadenylase Ccr4p; similar to Ngl1p; NGL3 has a paralog, NGL2, that arose from the whole genome duplication","termid":"PBO:0082053"}


id: PBO:0054832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2245","termid":"PBO:0054832"}


id: PBO:0075317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1","termid":"PBO:0075317"}


id: PBO:0082063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase; member of a family of enoyl-CoA hydratase/isomerases; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; phosphorylated; mutation affects fluid-phase endocytosis","termid":"PBO:0082063"}


id: FYPO:0006867
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115321,115322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115292,115293,115300,115304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to cell cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex","type":"exact"}],"termid":"FYPO:0006867","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: FYPO:0002238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cerulenin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on cerulenin","synonyms":[{"name":"normal cell population growth in presence of cerulenin","type":"exact"},{"name":"normal cell population growth on cerulenin","type":"exact"},{"name":"normal cellular response to cerulenin","type":"related"},{"name":"normal vegetative cell population growth on cerulenin","type":"exact"}],"termid":"FYPO:0002238"}


id: PBO:0029170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_torin1","termid":"PBO:0029170"}


id: PR:O94407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec65 gene.","definition_xrefs":["UniProtKB:O94407","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle sec65 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.15c","synonyms":[{"name":"Spom972h-sec65","type":"exact"}],"termid":"PR:O94407"}


id: FYECO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which Hoechst stain was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000161 Hoechst stain added (obsolete FYECO:0000161)","synonyms":[{"name":"bisBenzimide added","type":"narrow"}],"termid":"FYECO:0000161"}


id: GO:1901572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving chemical substance.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance metabolic process (obsolete GO:1901572)","synonyms":[{"name":"chemical substance metabolic process","type":"exact"},{"name":"chemical substance metabolism","type":"exact"}],"termid":"GO:1901572"}


id: PBO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 22","termid":"PBO:0070523"}


id: PBO:0057856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3167","termid":"PBO:0057856"}


id: RO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x tributary_of y if and only if x a channel for the flow of a substance into y, where y is larger than x. If x and y are hydrographic features, then y is the main stem of a river, or a lake or bay, but not the sea or ocean. If x and y are anatomical, then y is a vein.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_branching_relationship_with","termid":"RO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tributary_of","termid":"RO:0002376"}


id: PBO:0057748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1843","termid":"PBO:0057748"}


id: FYPO:0005206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:689088","PMID:872891","PMID:21965528","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"abnormal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"abnormal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005206"}


id: GO:0120079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:20705471","GOC:mah","PMID:8621557"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microfilament motor activity (obsolete GO:0120079)","synonyms":[{"name":"regulation of actin filament motor activity","type":"exact"},{"name":"regulation of actin-activated ATPase activity","type":"related"},{"name":"regulation of actin-dependent ATPase activity","type":"related"},{"name":"regulation of actin-filament motor activity","type":"exact"},{"name":"regulation of muscle motor activity","type":"narrow"},{"name":"regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120079"}


id: FYPO:0008027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the rate of acid phosphatase activation during phosphate starvation is increased.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of acid phosphatase activation during phosphate starvation","synonyms":[{"name":"increased acid phosphatase kinetics","type":"exact"}],"termid":"FYPO:0008027"}


id: GO:0032965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collagen biosynthetic process","synonyms":[{"name":"regulation of collagen anabolism","type":"exact"},{"name":"regulation of collagen biosynthesis","type":"exact"},{"name":"regulation of collagen formation","type":"exact"},{"name":"regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032965"}


id: PBO:0027882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_dimethylation","termid":"PBO:0027882"}


id: PBO:0068167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 474","termid":"PBO:0068167"}


id: PBO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_shmoo_formation","termid":"PBO:0031640"}


id: GO:0008314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to a ligand Gurken.","definition_xrefs":["GOC:bf","PMID:23972992"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken signaling pathway (obsolete GO:0008314)","synonyms":[{"name":"gurken receptor signaling pathway","type":"exact"},{"name":"gurken receptor signalling pathway","type":"exact"},{"name":"gurken-activated signaling pathway","type":"related"},{"name":"signaling by Gurken","type":"exact"}],"termid":"GO:0008314"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: PBO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1B (pseudogene)","termid":"PBO:0047757"}


id: SO:0001160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -30 and +15 relative to the TSS. Consensus sequence is KNNCAKCNCTRNY. Tends to co-occur with DMv2 (SO:0001161). Tends to not occur with DPE motif (SO:0000015) or MTE (0001162).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv3_motif","synonyms":[{"name":"DMv3","type":"exact"},{"name":"DMv3 motif","type":"exact"},{"name":"KNNCAKCNCTRNY","type":"narrow"},{"name":"directional motif v3","type":"exact"},{"name":"promoter motif 7","type":"exact"}],"termid":"SO:0001160"}


id: PBO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 21","termid":"PBO:0050947"}


id: PBO:0111066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA, antisense cnt5","termid":"PBO:0111066"}


id: GO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caloric restriction, insufficient food energy intake.","definition_xrefs":["GOC:dph","PMID:15520862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caloric restriction","termid":"GO:0061771"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: PBO:0088320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase","termid":"PBO:0088320"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: PBO:0078371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 15-1","termid":"PBO:0078371"}


id: FYPO:0002163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002946","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cell wall thickness during vegetative growth","synonyms":[{"name":"decreased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness during vegetative growth","type":"exact"},{"name":"thin cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002163"}


id: GO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + ATP + bicarbonate = ADP + 2 H+ + oxalosuccinate + phosphate.","definition_xrefs":["RHEA:20425","EC:6.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"2-oxoglutarate carboxylase activity","secondary_identifiers":["KEGG_REACTION:R08201","MetaCyc:RXN-8457"],"synonyms":[{"name":"CFI","type":"related"},{"name":"OGC","type":"related"},{"name":"carboxylating factor for ICDH","type":"related"},{"name":"oxalosuccinate synthetase activity","type":"related"}],"termid":"GO:0034029"}


id: PBO:0086746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; potential Cdc28p substrate; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0086746"}


id: GO:0032095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to a food stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to food","termid":"GO:0032095"}


id: PBO:0082733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; relieves transcriptional repression by binding to the Cyc8p-Tup1p corepressor and recruiting the SAGA complex to the repressed promoter; contains a PHD finger domain","termid":"PBO:0082733"}


id: PBO:0058014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3940","termid":"PBO:0058014"}


id: PATO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000713 relative time value (obsolete PATO:0000713)","termid":"PATO:0000713"}


id: PBO:0111826
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0111826"}


id: SO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequencer read which is part of a contig.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig_read","synonyms":[{"name":"contig read","type":"exact"}],"termid":"SO:0000476"}


id: PBO:0047931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(11)(p15.1)","termid":"PBO:0047931"}


id: GO:0038089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of the orderly movement of a cell from one site to another.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell migration","type":"narrow"},{"name":"VEGF-induced cell migration","type":"exact"},{"name":"positive regulation of cell migration by VEGF signaling pathway","type":"exact"},{"name":"positive regulation of cell migration by vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038089"}


id: PBO:0079171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1","termid":"PBO:0079171"}


id: GO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components by an organism to form a pore complex in a membrane of another organism.","definition_xrefs":["GOC:fj","PMID:21549739","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of plasma membrane integrity in another organism","termid":"GO:0051673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pore formation in membrane of another organism","synonyms":[{"name":"pore complex assembly in other organism","type":"exact"},{"name":"pore complex biogenesis in other organism","type":"exact"},{"name":"pore formation in membrane of other organism","type":"exact"},{"name":"pore formation in other organism","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0035915"}


id: PBO:0081621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 550","termid":"PBO:0081621"}


id: FYPO:0006898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the thickness of the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell wall morphology during vegetative growth","termid":"FYPO:0006982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall thickness during vegetative growth","synonyms":[{"name":"normal cell wall thickness during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006898"}


id: GO:0032171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes of fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cap","termid":"GO:0032159"},{"relation_name":"part_of","term_name":"germ tube","termid":"GO:0032179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germ tube septin cap","termid":"GO:0032171"}


id: GO:0070302
data:
  {"annotated_genes":["SJAG_05000","SJAG_04522","SJAG_01114","SJAG_03263","SJAG_02392","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95524,114319,103109,99884,91953,103678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via a stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of SAPK signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070302","terms_by_termid":{"GO:1903138":null}}


id: PBO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 21","termid":"PBO:0070280"}


id: PBO:0087839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0087839"}


id: GO:0043337
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89135],"is_not":false,"summary":null,"term":"GO:0043337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-diacylglycerol + phosphatidylglycerol = CMP + diphosphatidylglycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cardiolipin synthase (CMP-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483063","EC:2.7.8.41","MetaCyc:RXN-8141","RHEA:32931"],"synonyms":[{"name":"CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity","type":"exact"},{"name":"cardiolipin synthase","type":"broad"},{"name":"cardiolipin synthetase","type":"broad"}],"termid":"GO:0043337","terms_by_termid":{"GO:0043337":null}}


id: PBO:0089974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease","termid":"PBO:0089974"}


id: GO:1900209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiolipin metabolic process","termid":"GO:1900208"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiolipin metabolic process","synonyms":[{"name":"down regulation of cardiolipin metabolic process","type":"exact"},{"name":"down regulation of cardiolipin metabolism","type":"exact"},{"name":"down regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"down-regulation of cardiolipin metabolic process","type":"exact"},{"name":"down-regulation of cardiolipin metabolism","type":"exact"},{"name":"down-regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"down-regulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"downregulation of cardiolipin metabolic process","type":"exact"},{"name":"downregulation of cardiolipin metabolism","type":"exact"},{"name":"downregulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"downregulation of diphosphatidylglycerol metabolism","type":"related"},{"name":"inhibition of cardiolipin metabolic process","type":"narrow"},{"name":"inhibition of cardiolipin metabolism","type":"exact"},{"name":"inhibition of diphosphatidylglycerol metabolic process","type":"related"},{"name":"inhibition of diphosphatidylglycerol metabolism","type":"related"},{"name":"negative regulation of cardiolipin metabolism","type":"exact"},{"name":"negative regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"negative regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900209"}


id: GO:0060008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a Sertoli cell. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell differentiation","termid":"GO:0060008"}


id: PBO:0052293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 pseudogene 1","termid":"PBO:0052293"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: PBO:0062955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like 2A","termid":"PBO:0062955"}


id: PBO:0080964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7A","termid":"PBO:0080964"}


id: PBO:0071054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 56","termid":"PBO:0071054"}


id: PBO:0077395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132C","termid":"PBO:0077395"}


id: GO:0004772
data:
  {"annotated_genes":["SJAG_04049","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114882,84916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester.","definition_xrefs":["EC:2.3.1.26","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sterol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0017066"],"synonyms":[{"name":"sterol-ester synthase activity","type":"related"},{"name":"sterol-ester synthetase activity","type":"related"}],"termid":"GO:0004772","terms_by_termid":{"GO:0034737":null}}


id: PBO:0039470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD17 divergent transcript","termid":"PBO:0039470"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: PBO:0038546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17A, depalmitoylase","termid":"PBO:0038546"}


id: GO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is increased in the presence of cGMP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cGMP-stimulated cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004118"}


id: GO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels.","definition_xrefs":["PMID:18571247","GOC:bf","GOC:mah","PMID:18703043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gq/11-coupled serotonin receptor activity","synonyms":[{"name":"5-HT2 receptor activity","type":"broad"},{"name":"serotonin receptor activity, coupled via Gq/11","type":"exact"}],"termid":"GO:0001587"}


id: GO:0097391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 13 (CXCL13) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 13 production","synonyms":[{"name":"CXCL13 production","type":"exact"}],"termid":"GO:0097391"}


id: PBO:0086982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the vacuolar transporter chaperone (VTC) complex; VTC complex is involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; also has mRNA binding activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086982"}


id: GO:1901487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Positive regulation of transcription factor catabolism in response to increased oxygen levels, which results in negative regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels (obsolete GO:1901487)","synonyms":[{"name":"negative regulation of SREBP signaling by acceleration of SREBP degradation, in response to increased oxygen levels","type":"narrow"},{"name":"negative regulation of SREBP signaling by positive regulation of transcription factor catabolism in response to increased oxygen levels","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by positive regulation of SREBP degradation, in response to elevated oxygen","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway in presence of oxygen by positive regulation of transcription factor catabolic process","type":"related"},{"name":"negative regulation of SREBP-mediated signaling pathway in response to increased oxygen levels by positive regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901487"}


id: PBO:0077276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14D, pseudogene","termid":"PBO:0077276"}


id: PBO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1 (predicted)","termid":"PBO:0004642"}


id: PBO:0059759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 33","termid":"PBO:0059759"}


id: FYPO:0000135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in the plasma membrane is abnormal.","definition_xrefs":["GO:0097036","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"},{"relation_name":"is_a","term_name":"abnormal sterol distribution","termid":"FYPO:0007677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal plasma membrane sterol distribution","synonyms":[{"name":"abnormal plasma membrane sterol distribution during mitotic cell cycle","type":"related"},{"name":"abnormal plasma membrane sterol distribution during vegetative growth","type":"exact"},{"name":"abnormal regulation of plasma membrane sterol distribution","type":"exact"},{"name":"localization defects, sterol distribution defects","type":"exact"}],"termid":"FYPO:0000135"}


id: GO:0006929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate.","definition_xrefs":["PMID:11944043","PMID:14657486","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration","synonyms":[{"name":"substrate-bound cell migration","type":"exact"}],"termid":"GO:0006929"}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: PR:O94680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plh1 gene.","definition_xrefs":["UniProtKB:O94680","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.14","synonyms":[{"name":"PDAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plh1","type":"exact"},{"name":"pombe LRO1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94680"}


id: PBO:0040434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP8A1 divergent transcript","termid":"PBO:0040434"}


id: GO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recognition of both the 5' and 3'-splice sites and positioning them in the correct alignment with respect to each other so that the second catalytic step of nuclear mRNA splicing can occur.","definition_xrefs":["PMID:9430647","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-splice site recognition","termid":"GO:0000389"},{"relation_name":"is_a","term_name":"mRNA 5'-splice site recognition","termid":"GO:0000395"},{"relation_name":"part_of","term_name":"generation of catalytic spliceosome for second transesterification step","termid":"GO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"alignment of 3' and 5' splice sites of mRNA","synonyms":[{"name":"alignment of 3' and 5' splice sites of nuclear mRNA","type":"exact"}],"termid":"GO:0034403"}


id: FYPO:0001485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to oxidative stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to oxidative stress","synonyms":[{"name":"normal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal oxidative stress response","type":"exact"}],"termid":"FYPO:0001485"}


id: PATO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000717 viability value (obsolete PATO:0000717)","termid":"PATO:0000717"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: PR:Q9P327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of any of the following genes in Schizosaccharomyces pombe 972h-: SPAC977.09c/SPBC1348.10c.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C977.09c/C1348.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.10c","synonyms":[{"name":"Spom972h-SPBC1348.10c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P327"}


id: PBO:0036557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1 (predicted)","termid":"PBO:0036557"}


id: FYPO:0000807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is abnormal. Kinetochore organization results in the assembly, arrangement of constituent parts, or disassembly of the kinetochore, the chromosomal attachment point for the spindle microtubules.","definition_xrefs":["PomBase:mah","GO:0051383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal kinetochore organization","synonyms":[{"name":"abnormal kinetochore organisation","type":"exact"},{"name":"abnormal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"abnormal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000807"}


id: GO:0097273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete creatinine homeostasis (obsolete GO:0097273)","termid":"GO:0097273"}


