# terms

id: PBO:0066001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GTPase activating protein catalytic subunit alpha 1","termid":"PBO:0066001"}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-histidine catabolic process to glutamate and formate","synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine catabolic process to glutamate and formate","type":"broad"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: GO:0090187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of pancreatic juice secretion","termid":"GO:0090186"},{"relation_name":"positively_regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic juice secretion","termid":"GO:0090187"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: PBO:0055090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2508","termid":"PBO:0055090"}


id: PBO:0089967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein","termid":"PBO:0089967"}


id: PBO:0052238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 6","termid":"PBO:0052238"}


id: PR:O94490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.09c gene.","definition_xrefs":["UniProtKB:O94490","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C417.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.09c","synonyms":[{"name":"Spom972h-SPCC417.09c","type":"exact"}],"termid":"PR:O94490"}


id: GO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte activation","synonyms":[{"name":"down regulation of leukocyte activation","type":"exact"},{"name":"down-regulation of leukocyte activation","type":"exact"},{"name":"downregulation of leukocyte activation","type":"exact"},{"name":"inhibition of leukocyte activation","type":"narrow"},{"name":"negative regulation of immune cell activation","type":"exact"},{"name":"negative regulation of leucocyte activation","type":"exact"}],"termid":"GO:0002695"}


id: GO:0032434
data:
  {"annotated_genes":["SJAG_01210","SJAG_03699","SJAG_02485","SJAG_03048","SJAG_00475","SJAG_00071","SJAG_00052","SJAG_00642","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110685],"is_not":false,"summary":null,"term":"GO:0032434"},{"annotations":[98444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103013,86527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[107776,102721,98465,113117,104960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-dependent protein catabolic process","termid":"GO:2000058"},{"relation_name":"regulates","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_01210":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032434","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0076486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 1","termid":"PBO:0076486"}


id: PBO:0030772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_thiabendazole","termid":"PBO:0030772"}


id: PBO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated C terminal region of membrane transporter","termid":"PBO:0000087"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: PBO:0084759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial membrane protein; not required for respiratory growth but causes a synthetic respiratory defect in combination with rmd9 mutations; transcriptionally up-regulated by TOR; deletion increases life span; YBR238C has a paralog, RMD9, that arose from the whole genome duplication","termid":"PBO:0084759"}


id: PBO:0058840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8070","termid":"PBO:0058840"}


id: GO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle formation","termid":"GO:0072033"},{"relation_name":"part_of","term_name":"metanephric renal vesicle morphogenesis","termid":"GO:0072283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle formation","synonyms":[{"name":"metanephros formation","type":"exact"}],"termid":"GO:0072093"}


id: GO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a carbohydrate is transported to, or maintained in, a specific location. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carbohydrate localization","synonyms":[{"name":"carbohydrate localisation","type":"exact"}],"termid":"GO:0052575"}


id: GO:0072393
data:
  {"annotated_genes":["SJAG_01613","SJAG_03835","SJAG_01546","SJAG_03062","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[99132,95308,92868,105095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a microtubule organizing center.","definition_xrefs":["PMID:19825938","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule anchoring at MTOC","type":"exact"},{"name":"microtubule anchoring at microtubule organising centre","type":"exact"}],"termid":"GO:0072393","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: GO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of peptide transport","termid":"GO:0090087"}


id: GO:0019313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose metabolic process (obsolete GO:0019313)","synonyms":[{"name":"allose metabolism","type":"exact"}],"termid":"GO:0019313"}


id: GO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:amm","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 binding","synonyms":[{"name":"CCL5 binding","type":"exact"},{"name":"RANTES binding","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted binding","type":"exact"}],"termid":"GO:0071791"}


id: PBO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog (predicted)","termid":"PBO:0004253"}


id: MOD:01944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"}


id: GO:0035475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional migration of angioblast cells as part of selective angioblast sprouting, which results in angioblast segregation into arterial and venous populations.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioblast cell migration","termid":"GO:0035476"},{"relation_name":"part_of","term_name":"selective angioblast sprouting","termid":"GO:0035474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}


id: PBO:0088396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family Adi1","termid":"PBO:0088396"}


id: PBO:0079683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3D","termid":"PBO:0079683"}


id: GO:1900469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["PMID:8056324","PMID:8614637","GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylserine formation","type":"exact"},{"name":"down regulation of phosphatidylserine synthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylserine formation","type":"exact"},{"name":"down-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"downregulation of phosphatidylserine anabolism","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylserine formation","type":"exact"},{"name":"downregulation of phosphatidylserine synthesis","type":"exact"},{"name":"inhibition of phosphatidylserine anabolism","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthesis","type":"exact"},{"name":"inhibition of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylserine formation","type":"exact"},{"name":"inhibition of phosphatidylserine synthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylserine formation","type":"exact"},{"name":"negative regulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900469"}


id: SO:0005856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine_tRNA_primary_transcript","synonyms":[{"name":"selenocysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0005856"}


id: PBO:0036490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get1 (predicted)","termid":"PBO:0036490"}


id: PBO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 4","termid":"PBO:0071919"}


id: SO:0000787
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000787 clone_attribute (obsolete SO:0000787)","termid":"SO:0000787"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0033013","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: GO:0102104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4-coumaroyl)acetyl-CoA + feruloyl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"demethoxycurcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-11224"],"termid":"GO:0102104"}


id: PBO:0066585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member B","termid":"PBO:0066585"}


id: FYPO:0005381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the gamma-tubulin complex is localized to only one spindle pole body instead of both.","definition_xrefs":["PomBase:mah","PMID:11102508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body","synonyms":[{"name":"abnormal gamma-tubulin complex localization to single mitotic spindle pole body","type":"exact"},{"name":"abnormally asymmetric gamma-tubulin complex localization to single mitotic spindle pole body","type":"exact"},{"name":"asymmetric gamma-tubulin complex localisation to single mitotic spindle pole body","type":"exact"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic SPB","type":"exact"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"asymmetric gamma-tubulin complex localization to single mitotic spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0005381"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["GOC:add","PMID:16556257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: _global:regulates_o_has_input
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_input relation","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_input","secondary_identifiers":["GOREL:0001030"],"termid":"_global:regulates_o_has_input"}


id: PATO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's containing bone.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous","synonyms":[{"name":"bony","type":"exact"}],"termid":"PATO:0002126"}


id: GO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"positively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated T cell proliferation","synonyms":[{"name":"activation of activated T cell proliferation","type":"narrow"},{"name":"positive regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of activated T-cell proliferation","type":"exact"},{"name":"positive regulation of activated T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of activated T cell proliferation","type":"narrow"},{"name":"up regulation of activated T cell proliferation","type":"exact"},{"name":"up-regulation of activated T cell proliferation","type":"exact"},{"name":"upregulation of activated T cell proliferation","type":"exact"}],"termid":"GO:0042104"}


id: MOD:01032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxymethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxymethyl modified residue","synonyms":[{"name":"Bom","type":"exact"}],"termid":"MOD:01032"}


id: GO:0042567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins, which in animals is approximately 150kDa and consists of the insulin-like growth factor (IGF), the insulin-like growth factor binding protein-3 (IGFBP-3), or -5 (IGFBP-5) and an acid-labile subunit (ALS). The complex plays a role in growth and development.","definition_xrefs":["PMID:12239079","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor ternary complex","synonyms":[{"name":"IGF ternary complex","type":"exact"}],"termid":"GO:0042567"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: PBO:0030515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_camptothecin","termid":"PBO:0030515"}


id: GO:0052737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + H2O + pyruvate = a ubiquinol + acetate + CO2.","definition_xrefs":["EC:1.2.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, with a quinone or similar compound as acceptor","termid":"GO:0052738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pyruvate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:RXN-11496","RHEA:27405","KEGG_REACTION:R03145"],"synonyms":[{"name":"pyruvate dehydrogenase activity","type":"broad"},{"name":"pyruvate:ubiquinone oxidoreductase activity","type":"exact"},{"name":"pyruvate:ubiquinone-8-oxidoreductase activity","type":"related"},{"name":"pyruvic dehydrogenase activity","type":"broad"}],"termid":"GO:0052737"}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["PMID:14602517","PMID:24463506","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: GO:0033265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choline, the amine 2-hydroxy-N,N,N-trimethylethanaminium.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choline binding","termid":"GO:0033265"}


id: PBO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ERG","termid":"PBO:0046492"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_00296","SJAG_02019","SJAG_04757","SJAG_04551","SJAG_04028","SJAG_03895","SJAG_02322","SJAG_04668","SJAG_01400","SJAG_02877","SJAG_04698","SJAG_03873","SJAG_03850","SJAG_04096","SJAG_02532","SJAG_03631","SJAG_01090","SJAG_02440","SJAG_03399","SJAG_05229","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93454,91738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[110496,88447,88500,95711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[91787,92086,105441,97707,90916,91557,104730,86819,94422,109991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[87305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[87323,109428],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98226],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[89479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0032472":null,"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87323,109428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: SO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA cytosine base feature, modified by a hydroxymethyl group at the 5 carbon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_hydroxymethylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5-hmC","type":"exact"},{"name":"5-hydroxymethylcytosine","type":"exact"}],"termid":"SO:0001960"}


id: PBO:0089379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier protein] reductase","termid":"PBO:0089379"}


id: PBO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YDR208W","termid":"PBO:0002351"}


id: SO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which can be transcribed, but will not be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_protein_coding","synonyms":[{"name":"non protein-coding","type":"exact"}],"termid":"SO:0000011"}


id: PBO:0034391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-relation_between_structure_and_stage","termid":"PBO:0034391"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: FYPO:0006366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering does not occur. Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["PomBase:mah","PMID:24954111","GO:0045141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic telomere clustering","termid":"FYPO:0000172"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiotic telomere clustering","synonyms":[{"name":"abolished bouquet formation","type":"exact"},{"name":"meiotic telomere clustering abolished","type":"exact"}],"termid":"FYPO:0006366"}


id: SO:1000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation (obsolete SO:1000107)","synonyms":[{"name":"mutation causing out of frame polypeptide N terminal elongation","type":"exact"},{"name":"out of frame polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000107"}


id: FYPO:0002852
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to cell end during vegetative growth","type":"exact"},{"name":"increased protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002852","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:0055080
data:
  {"annotated_genes":["SJAG_02578","SJAG_03866","SJAG_04675","SJAG_04698","SJAG_04955","SJAG_00792","SJAG_04028","SJAG_04032","SJAG_04616","SJAG_01669","SJAG_02457","SJAG_04167","SJAG_03850","SJAG_02834","SJAG_00301","SJAG_01913","SJAG_04031","SJAG_03401","SJAG_00136","SJAG_00668","SJAG_00802","SJAG_01400","SJAG_00822","SJAG_01541","SJAG_02847","SJAG_01694","SJAG_03528","SJAG_01817","SJAG_01990","SJAG_01004","SJAG_03516","SJAG_02080","SJAG_01353","SJAG_00923","SJAG_04584","SJAG_04111","SJAG_01803","SJAG_00222","SJAG_03862","SJAG_02532","SJAG_03631","SJAG_02019","SJAG_04867","SJAG_02470","SJAG_01007","SJAG_02735","SJAG_04757","SJAG_03879","SJAG_02474","SJAG_02883","SJAG_04677","SJAG_00328","SJAG_00212","SJAG_04096","SJAG_01078","SJAG_01397","SJAG_04743","SJAG_05294","SJAG_02716","SJAG_04607","SJAG_04892","SJAG_00516","SJAG_02399","SJAG_00532","SJAG_04760","SJAG_04258","SJAG_04403","SJAG_01129","SJAG_02023","SJAG_03793","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88551,90213,90205,99871],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[92377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055070"},{"annotations":[86820,87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[111142,92904,91789,97708,108408,109993,109427,91558,97092,104731,111613,114595,94209,94423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[74006,96234,92378,103922,89224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[85403,92379,88403,100337,89050,90164,109946,96560,103481,74007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[103655,86346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[91427,99879,113021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[92836,91540,85635,93095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[99880],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[89871,89870,92286,98853,90822,97303,96235,86571,99658,110401,100390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[113022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[101759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[88548,88552,99873,108857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[96585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[83851,109842,94910,83852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[106851,61567,61323,106852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[97716,98064,99992,85449,91760,84190,114746,85974,95002,96091,86288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of monoatomic cations within an organism or cell. 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id: GO:0042943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-amino acids from one side of a membrane to the other. D-amino acids are the D-enantiomers of amino acids.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"D-amino acid transmembrane transporter activity","synonyms":[{"name":"D-amino acid transporter activity","type":"broad"}],"termid":"GO:0042943"}


id: PR:Q9UT93
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-activating enzyme E1 regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10953:SF29","OMA:SCHPO01625","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-activating enzyme E1 regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.06c","secondary_identifiers":["UniProtKB:Q9UT93"],"synonyms":[{"name":"Spom972h-NAE1","type":"exact"},{"name":"ubiquitin-activating enzyme E1-like 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-like activation protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT93"}


id: PR:O42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.02c gene.","definition_xrefs":["UniProtKB:O42657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C27D7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.02c","synonyms":[{"name":"Spom972h-SPAC27D7.02c","type":"exact"}],"termid":"PR:O42657"}


id: GO:0034918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylhexanoyl-CoA = 2-methyl-3-oxohexanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-2-methylhexanoyl-CoA dehydrogenase activity","termid":"GO:0034918"}


id: PBO:0089891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Dip5","termid":"PBO:0089891"}


id: GO:0010650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"positively_regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by electrical coupling","termid":"GO:0010650"}


id: PBO:0027591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV","termid":"PBO:0027591"}


id: MOD:00993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenyl ester","synonyms":[{"name":"OPh","type":"exact"}],"termid":"MOD:00993"}


id: PBO:0079673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 3","termid":"PBO:0079673"}


id: PBO:0039086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP/GTP binding carboxypeptidase 1","termid":"PBO:0039086"}


id: PATO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disomy quality inhering in a bearer by virtue of the bearer's containing two copies of the chromosome from one of the parents (with no contribution from the other parent).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Uniparental_disomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disomy","termid":"PATO:0001387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniparental disomy","termid":"PATO:0001388"}


id: GO:0060186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of the outer ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"outer ear morphogenesis","termid":"GO:0042473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear emergence","synonyms":[{"name":"ear elevation","type":"related"},{"name":"ear extroversion","type":"related"},{"name":"outer ear growth","type":"related"}],"termid":"GO:0060186"}


id: PBO:0003684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein Uds1","termid":"PBO:0003684"}


id: PBO:0074687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 67","termid":"PBO:0074687"}


id: GO:2000661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-1-mediated signaling pathway","termid":"GO:2000659"},{"relation_name":"positively_regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"positive regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"positive regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"positive regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"positive regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000661"}


id: GO:2000544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to fibroblast growth factor.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell chemotaxis to fibroblast growth factor","termid":"GO:1904847"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:2000544"}


id: PBO:0063220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 9","termid":"PBO:0063220"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of an axoneme consisting in a doublet microtubule. Nine of these outer doublets form the 9+0 axoneme, while the 9+2 axoneme also contains a central pair. Dynein arms attached to the doublets provide the mechanism of movement of the cilium.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:pr","PMID:5044758","PMID:5664206","Wikipedia:Axoneme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal outer doublet","synonyms":[{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: PBO:0049514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 21","termid":"PBO:0049514"}


id: PBO:0061639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 17","termid":"PBO:0061639"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: PBO:0039181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 11","termid":"PBO:0039181"}


id: PBO:0045074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 2","termid":"PBO:0045074"}


id: PBO:0050700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 13","termid":"PBO:0050700"}


id: PBO:0046238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 32","termid":"PBO:0046238"}


id: PBO:0064417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase","termid":"PBO:0064417"}


id: PBO:0087738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; this complex is involved in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance","termid":"PBO:0087738"}


id: PBO:0004851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga1","termid":"PBO:0004851"}


id: GO:0007312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the oocyte nucleus within the cell as part of the establishment and maintenance of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","termid":"GO:0051663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oocyte nucleus migration involved in oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0008102","GO:0048128","GO:0048126","GO:0030722"],"synonyms":[{"name":"establishment of localization of oocyte nucleus during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localisation involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal-ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis determination","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsoventral axis specification","type":"related"},{"name":"nucleus positioning in oocyte during oocyte axis determination","type":"broad"},{"name":"oocyte axis determination, establishment of localization of nucleus","type":"broad"},{"name":"oocyte axis determination, establishment of oocyte nucleus localization","type":"broad"},{"name":"oocyte axis determination, establishment of position of nucleus","type":"broad"},{"name":"oocyte axis determination, oocyte nuclear migration","type":"exact"},{"name":"oocyte axis determination, oocyte nucleus migration","type":"exact"},{"name":"oocyte axis determination, positioning of nucleus","type":"broad"},{"name":"oocyte nuclear migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis specification","type":"related"},{"name":"oocyte nucleus positioning during oocyte axis determination","type":"broad"}],"termid":"GO:0007312"}


id: PBO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.68","termid":"PBO:0002352"}


id: FYPO:0001443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished transcription during vegetative growth","synonyms":[{"name":"abolished transcription during mitotic cell cycle","type":"related"},{"name":"transcription abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001443"}


id: FYPO:0001075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on papulacandin B","synonyms":[{"name":"normal cell population growth in presence of papulacandin B","type":"exact"},{"name":"normal cell population growth on papulacandin B","type":"exact"},{"name":"normal cellular response to papulacandin B","type":"related"},{"name":"normal vegetative cell population growth on papulacandin B","type":"exact"}],"termid":"FYPO:0001075"}


id: PBO:0109382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 13","termid":"PBO:0109382"}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: PBO:0053804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1061","termid":"PBO:0053804"}


id: PBO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CDC9","termid":"PBO:0000945"}


id: FYPO:0005885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myxothiazol. Cells stop growing (and may die) at a concentration of myxothiazol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myxothiazol","synonyms":[{"name":"hypersensitive to myxothiazol","type":"exact"},{"name":"sensitive to MXT","type":"exact"},{"name":"sensitive to myxothiazol during mitotic cell cycle","type":"related"},{"name":"sensitive to myxothiazol during vegetative growth","type":"exact"}],"termid":"FYPO:0005885"}


id: GO:2000341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:0035926","GO:1904207"],"synonyms":[{"name":"chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"regulation of CCL2 secretion","type":"narrow"},{"name":"regulation of CXCL2 production","type":"exact"},{"name":"regulation of MIP-2 production","type":"exact"},{"name":"regulation of MIP2 production","type":"exact"},{"name":"regulation of SCYB2 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000341"}


id: PBO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Changed Amorilide Resistance","termid":"PBO:0002110"}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["EC:4.1.2.43","MetaCyc:R10-RXN","RHEA:25201"],"termid":"GO:0043801"}


id: PR:O14216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.11","secondary_identifiers":["PR:000027524","UniProtKB:O14216"],"synonyms":[{"name":"DNA replication regulator drc1","type":"exact"},{"name":"SPAC6B12.11","type":"related"},{"name":"Spom972h-SLD2","type":"exact"}],"termid":"PR:O14216"}


id: GO:1901641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ITP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ITP binding","termid":"GO:1901641"}


id: PBO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 10","termid":"PBO:0060109"}


id: PBO:0082593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Citrate synthase, peroxisomal isozyme involved in glyoxylate cycle; catalyzes condensation of acetyl coenzyme A and oxaloacetate to form citrate; expression is controlled by Rtg1p and Rtg2p transcription factors; SCF-Ucc1 regulates level of Cit2p to maintain citrate homeostasis; oxaloacetate-dependent positive feedback loop inhibits Cit2p ubiquitination; CIT2 has a paralog, CIT1, that arose from the whole genome duplication","termid":"PBO:0082593"}


id: GO:1903349
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90721],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097629"}]},"cv_name":"cellular_component","definition":"Any membrane that is part of an omegasome.","definition_xrefs":["GOC:TermGenie","PMID:24591649","PMID:18725538","GO_REF:0000064","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"omegasome","termid":"GO:1990462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"omegasome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903349","terms_by_termid":{"GO:0097629":null}}


id: GO:0032986
data:
  {"annotated_genes":["SJAG_02314","SJAG_01653","SJAG_04038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86193,93185,112954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"The disaggregation of a protein-DNA complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-DNA complex organization","termid":"GO:0071824"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02314":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-protein complex disassembly","type":"exact"}],"termid":"GO:0032986","terms_by_termid":{"GO:0006337":null}}


id: GO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of a kidney. A kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney morphogenesis","termid":"GO:0060993"}


id: GO:1905374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a homocysteine stimulus.","definition_xrefs":["PMID:26722473","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to homocysteine","synonyms":[{"name":"response to 2-amino-4-mercaptobutyric acid","type":"exact"},{"name":"response to 2-amino-4-sulfanylbutanoic acid","type":"exact"},{"name":"response to Hcy","type":"exact"}],"termid":"GO:1905374"}


id: PBO:0051241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-53-1 (pseudogene)","termid":"PBO:0051241"}


id: FYPO:0006406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the spindle pole body is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body morphology","termid":"FYPO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle pole body morphology during meiotic cell cycle","synonyms":[{"name":"abnormal SPB morphology during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006406"}


id: PBO:0083187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YFR011C; identified by expression profiling and mass spectrometry","termid":"PBO:0083187"}


id: PBO:0086508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein mannosyltransferase similar to Pmt1p; has a potential role in protein O-glycosylation","termid":"PBO:0086508"}


id: MOD:01366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site K","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01366"}


id: GO:0008807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-carboxyvinyl carboxyphosphonate = 3-(hydrohydroxyphosphoryl)pyruvate + CO2.","definition_xrefs":["EC:2.7.8.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"carboxyvinyl-carboxyphosphonate phosphorylmutase activity","secondary_identifiers":["RHEA:14045","MetaCyc:2.7.8.23-RXN"],"synonyms":[{"name":"1-carboxyvinyl carboxyphosphonate phosphorylmutase (decarboxylating)","type":"related"},{"name":"CPEP phosphonomutase activity","type":"related"},{"name":"carboxyphosphonoenolpyruvate phosphonomutase activity","type":"related"}],"termid":"GO:0008807"}


id: PBO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy","termid":"PBO:0001063"}


id: GO:0010192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage, a gelatinous substance secreted by plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process","synonyms":[{"name":"mucilage anabolism","type":"exact"},{"name":"mucilage biosynthesis","type":"exact"},{"name":"mucilage formation","type":"exact"},{"name":"mucilage synthesis","type":"exact"}],"termid":"GO:0010192"}


id: PR:P48008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.01","synonyms":[{"name":"Spom972h-spn3","type":"exact"}],"termid":"PR:P48008"}


id: PBO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates adg3","termid":"PBO:0001954"}


id: PBO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.3","termid":"PBO:0001752"}


id: GO:0090641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins.","definition_xrefs":["PMID:19457051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"microsporidian-type endospore","termid":"GO:0090641"}


id: PBO:0050192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene","termid":"PBO:0050192"}


id: GO:0008650
data:
  {"annotated_genes":["SJAG_00722","SJAG_03773","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85758,97425,104450],"is_not":false,"summary":null,"term":"GO:0008650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (uridine) methyltransferase activity","termid":"GO:0016436"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (uridine-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6793127"],"termid":"GO:0008650","terms_by_termid":{"GO:0008650":null}}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7856876","Unimod:301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: PBO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBAG9 pseudogene 1","termid":"PBO:0045737"}


id: PR:O59726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fnx2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter fnx2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.06c","synonyms":[{"name":"Spom972h-fnx2","type":"exact"}],"termid":"PR:O59726"}


id: PBO:0045842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 32","termid":"PBO:0045842"}


id: PBO:0090247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Ssu72","termid":"PBO:0090247"}


id: PR:Q9USL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A hydroxymethylpyrimidine/phosphomethylpyrimidine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylpyrimidine/phosphomethylpyrimidine kinase C18B5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.05c","secondary_identifiers":["UniProtKB:Q9USL6"],"synonyms":[{"name":"HMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMP-P kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMP-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMPP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-thiD","type":"exact"},{"name":"hydroxymethylpyrimidine kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hydroxymethylpyrimidine phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL6"}


id: PBO:0044247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 2 pseudogene 2","termid":"PBO:0044247"}


id: GO:0070780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrosphingosine 1-phosphate + H2O = dihydrosphingosine + phosphate.","definition_xrefs":["GOC:pde","PMID:12815058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"dihydrosphingosine-1-phosphate phosphatase activity","secondary_identifiers":["Reactome:R-HSA-428664","RHEA:27514","MetaCyc:RXN3DJ-25"],"synonyms":[{"name":"dihydrosphingosine-1-phosphate phosphohydrolase activity","type":"exact"},{"name":"sphinganine-1-phosphate phosphatase activity","type":"exact"}],"termid":"GO:0070780"}


id: PBO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein","termid":"PBO:0000081"}


id: PBO:0035966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035966"}


id: PBO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 2","termid":"PBO:0075212"}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: PBO:0049665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H19 imprinted maternally expressed transcript","termid":"PBO:0049665"}


id: GO:0045943
data:
  {"annotated_genes":["SJAG_05187","SJAG_01764","SJAG_01149","SJAG_02608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88148,103032,106638,113043],"is_not":false,"summary":null,"term":"GO:0045943"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase I.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01764":null,"SJAG_02608":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"positive regulation of transcription from Pol I promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"stimulation of transcription from RNA polymerase I promoter","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase I promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase I promoter","type":"exact"}],"termid":"GO:0045943","terms_by_termid":{"GO:0045943":null}}


id: PR:Q10219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.12c gene.","definition_xrefs":["UniProtKB:Q10219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.12c","synonyms":[{"name":"Spom972h-SPAC4H3.12c","type":"exact"}],"termid":"PR:Q10219"}


id: PBO:0091622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase Pcm2","termid":"PBO:0091622"}


id: PBO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 4","termid":"PBO:0050415"}


id: GO:0036451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the 2'-O-ribose of the first or second transcribed nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cap mRNA methylation (obsolete GO:0036451)","termid":"GO:0036451"}


id: GO:0140205
data:
  {"annotated_genes":["SJAG_00922","SJAG_01983","SJAG_01660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[91628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[104053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[99095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of an oligopeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01660":null,"SJAG_01983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oligopeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140205","terms_by_termid":{"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:1901583":null}}


id: GO:2000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellooligosaccharide catabolic process","synonyms":[{"name":"cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000903"}


id: PBO:0056685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 9","termid":"PBO:0056685"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: GO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an axoneme is exposed entirely or partially to the cytoplasm or by which the cytoplasmic portion is assembled or extended. Cytosolic ciliogenesis can occur following compartmentalized ciliogenesis, in which the cilium is formed within a compartment separated from the cytoplasm.","definition_xrefs":["PMID:26654377","PMID:25447994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cytosolic ciliogenesis","synonyms":[{"name":"intracellular ciliogenesis","type":"related"}],"termid":"GO:0061824"}


id: PBO:0057825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3144","termid":"PBO:0057825"}


id: PBO:0078530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 23","termid":"PBO:0078530"}


id: PBO:0068805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 42, pseudogene","termid":"PBO:0068805"}


id: GO:0016162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose and cellotetraose, releasing cellobiose from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cellulose 1,4-beta-cellobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.91-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-cellobiohydrolase activity","type":"related"},{"name":"1,4-beta-glucan cellobiosidase activity","type":"related"},{"name":"C1 cellulase activity","type":"related"},{"name":"CBH 1","type":"related"},{"name":"avicelase activity","type":"broad"},{"name":"beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"beta-1,4-glucan cellobiosylhydrolase activity","type":"related"},{"name":"cellobiohydrolase I","type":"related"},{"name":"cellobiohydrolase activity","type":"related"},{"name":"cellobiosidase activity","type":"related"},{"name":"exo-1,4-beta-D-glucanase activity","type":"related"},{"name":"exo-beta-1,4-glucan cellobiohydrolase activity","type":"related"},{"name":"exo-cellobiohydrolase activity","type":"related"},{"name":"exocellobiohydrolase activity","type":"related"},{"name":"exoglucanase activity","type":"related"}],"termid":"GO:0016162"}


id: PBO:0014289
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CDC15","termid":"PBO:0014289"}


id: PBO:0084716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane m-AAA protease component; mediates degradation of misfolded or unassembled proteins; also required for correct assembly of mitochondrial enzyme complexes; overexpression of human AFG3L2 complements respiratory defect of yeast afg3 yta12 double null mutation, but overexpression of disease-associated AFG3L2 variants does not; expression of both human SPG7 (paraplegin) and AFG3L2 complements yeast yta12 afg3 double mutation","termid":"PBO:0084716"}


id: GO:0110118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["PMID:16377567","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of photoreceptor cell differentiation","termid":"GO:0046533"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"negatively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"}


id: PBO:0069436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 701, pseudogene","termid":"PBO:0069436"}


id: FYPO:0002996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to hydrogen peroxide","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to H2O2","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002996"}


id: PBO:0048986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich promoter binding protein 1","termid":"PBO:0048986"}


id: GO:0035054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta.","definition_xrefs":["GOC:bf","PMID:12435360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}


id: PBO:0075295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33 pseudogene 1","termid":"PBO:0075295"}


id: RO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any entity (e.g., an organism, organism population, or an organism part) that interacts with an exposure stimulus during the exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_receptor","termid":"RO:0002240"}


id: PBO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 1","termid":"PBO:0061610"}


id: PR:Q9UT00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An extended synaptotagmin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PYUK71.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUK71.03c","secondary_identifiers":["UniProtKB:Q9UT00"],"synonyms":[{"name":"Spom972h-ESYT1","type":"exact"}],"termid":"PR:Q9UT00"}


id: PBO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic Rho guanine nucleotide exchange factor","termid":"PBO:0090236"}


id: GO:0031571
data:
  {"annotated_genes":["SJAG_02026","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87410,105744],"is_not":false,"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic cell cycle G1/S transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G1/S transition checkpoint signaling","termid":"GO:0044819"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic G1 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072431","GO:0044783","GO:1902400"],"synonyms":[{"name":"G1 DNA damage checkpoint","type":"related"},{"name":"G1/S DNA damage checkpoint","type":"related"},{"name":"intracellular signal transduction involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signal transduction pathway involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling cascade involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling chain involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in G1 DNA damage checkpoint","type":"exact"},{"name":"intracellular signaling pathway involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"mitotic G1 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G1 DNA damage checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"related"},{"name":"signal transduction via intracellular signaling cascade involved in G1 DNA damage checkpoint","type":"exact"},{"name":"signal transduction via intracellular signaling cascade involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"signal transmission via intracellular cascade involved in G1 DNA damage checkpoint","type":"exact"}],"termid":"GO:0031571","terms_by_termid":{"GO:0031571":null}}


id: PBO:0049954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A","termid":"PBO:0049954"}


id: PBO:0040325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1","termid":"PBO:0040325"}


id: GO:0010499
data:
  {"annotated_genes":["SJAG_00591","SJAG_05252","SJAG_00837","SJAG_02625"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70036,74180,75938,77833],"is_not":false,"summary":null,"term":"GO:0010499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome but do not involve ubiquitin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02625":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteasomal ubiquitin-independent protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010499","terms_by_termid":{"GO:0010499":null}}


id: PBO:0079301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin","termid":"PBO:0079301"}


id: PBO:0086736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; open reading frame overlaps LSM8/YJR022W encoding an essential snRNP protein required for RNA processing and splicing","termid":"PBO:0086736"}


id: GO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the sinus venosus from unspecified parts. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber formation","termid":"GO:0003207"},{"relation_name":"part_of","term_name":"sinus venosus morphogenesis","termid":"GO:0003236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinus venosus formation","termid":"GO:0003237"}


id: PR:Q9P7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gad8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom972h-gad8","type":"exact"}],"termid":"PR:Q9P7J8"}


id: PBO:0069943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1236, pseudogene","termid":"PBO:0069943"}


id: PBO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 15","termid":"PBO:0050237"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0041089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bombesin receptor subtype 3","termid":"PBO:0041089"}


id: FYPO:0006956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of deferrichrome measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular deferrichrome level","synonyms":[{"name":"increased cellular deferrichrome level during mitotic cell cycle","type":"related"},{"name":"increased cellular deferrichrome level during vegetative growth","type":"exact"},{"name":"increased cellular deferriferrichrome level","type":"exact"},{"name":"increased deferrichrome accumulation","type":"related"}],"termid":"FYPO:0006956"}


id: PBO:0078209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-2","termid":"PBO:0078209"}


id: FYPO:0001215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a protein complex at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein complex assembly during vegetative growth","synonyms":[{"name":"normal cellular protein complex assembly during vegetative growth","type":"exact"},{"name":"normal protein complex assembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001215"}


id: FYPO:0001452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to water deprivation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to water deprivation","synonyms":[{"name":"increased growth during cellular response to water deprivation","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to water deprivation","type":"exact"},{"name":"resistance to water deprivation during mitotic cell cycle","type":"related"},{"name":"resistance to water deprivation during vegetative growth","type":"exact"},{"name":"resistant to dehydration","type":"exact"},{"name":"resistant to water deprivation","type":"exact"}],"termid":"FYPO:0001452"}


id: GO:1990642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a castration stimulus, deprivation of gonads.","definition_xrefs":["PMID:11255226"],"gene_count":0,"genotype_count":0,"name":"obsolete response to castration (obsolete GO:1990642)","synonyms":[{"name":"response to castration","type":"exact"}],"termid":"GO:1990642"}


id: PBO:0039956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL2-SNX15 readthrough (NMD candidate)","termid":"PBO:0039956"}


id: FYPO:0004035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin-disulfide reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal thioredoxin-disulfide reductase activity","termid":"FYPO:0004035"}


id: PBO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 4","termid":"PBO:0047496"}


id: PBO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase (predicted)","termid":"PBO:0001092"}


id: PBO:0065277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 2A","termid":"PBO:0065277"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: PBO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_malate_import","termid":"PBO:0030492"}


id: GO:0062090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of taurine biosynthesis.","definition_xrefs":["PMID:18648510","GOC:BHF","PMID:24911144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of taurine biosynthetic process","termid":"GO:0062089"},{"relation_name":"positively_regulates","term_name":"taurine biosynthetic process","termid":"GO:0042412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of taurine biosynthetic process","termid":"GO:0062090"}


id: GO:0062069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GARP complex.","definition_xrefs":["PMID:20163565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GARP complex binding","termid":"GO:0062069"}


id: PBO:0080471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 2","termid":"PBO:0080471"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: PBO:0003915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt6 (predicted)","termid":"PBO:0003915"}


id: GO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X-C chemokine; C-X-C chemokines have a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"C-X-C chemokine binding","termid":"GO:0019958"}


id: GO:0141000
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 4 at the lysine-91 residue.","definition_xrefs":["PMID:19818714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 ubiquitin ligase activity","termid":"GO:0141056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0004842","GO:0016740","GO:0016746","GO:0003824","GO:0019787","GO:0140096"],"is_obsolete":false,"name":"histone H4K91 ubiquitin ligase activity","synonyms":[{"name":"histone H4-K91 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H4-K91 specific)","type":"exact"}],"termid":"GO:0141000"}


id: PBO:0061742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 1","termid":"PBO:0061742"}


id: PBO:0036018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invertase_activity_during_glucose_starvation","termid":"PBO:0036018"}


id: GO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll catabolic process","termid":"GO:0015996"},{"relation_name":"is_a","term_name":"bacteriochlorophyll metabolic process","termid":"GO:0030493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bacteriochlorophyll catabolic process","synonyms":[{"name":"bacteriochlorophyll breakdown","type":"exact"},{"name":"bacteriochlorophyll catabolism","type":"exact"},{"name":"bacteriochlorophyll degradation","type":"exact"}],"termid":"GO:0030495"}


id: PBO:0039872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP29 antisense RNA 1","termid":"PBO:0039872"}


id: GO:2000646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of receptor catabolic process","termid":"GO:2000644"},{"relation_name":"positively_regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of receptor catabolic process","synonyms":[{"name":"positive regulation of receptor breakdown","type":"exact"},{"name":"positive regulation of receptor catabolism","type":"exact"},{"name":"positive regulation of receptor degradation","type":"exact"}],"termid":"GO:2000646"}


id: GO:1990828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hepatocyte (specialized epithelial cell of the liver) loses the structural or functional features that characterize it in the mature organism, or some other relatively stable phase of the organism's life history. Under certain conditions, these cells can revert back to the features of the stem cells that were their ancestors.","definition_xrefs":["PMID:20102719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte dedifferentiation","termid":"GO:1990828"}


id: PBO:0004982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 1","termid":"PBO:0004982"}


id: PBO:0090329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10, low frequency splice site, possible frameshifted","termid":"PBO:0090329"}


id: GO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast inner membrane (obsolete GO:0031357)","synonyms":[{"name":"integral to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031357"}


id: GO:0070425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"negative regulation of NOD signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070425"}


id: PBO:0077727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 17","termid":"PBO:0077727"}


id: GO:1990032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel fiber results from the bifurcation of a cerebellar granule cell axon in the molecular layer into two diametrically opposed branches, that are oriented parallel to the long axis of the folium.","definition_xrefs":["ISBN:0195159551","NIF_Subcellular:nlx_330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"parallel fiber","termid":"GO:1990032"}


id: GO:0071983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit from diapause","termid":"GO:0071981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from reproductive diapause","termid":"GO:0071983"}


id: PBO:0046796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor like 2","termid":"PBO:0046796"}


id: GO:0019277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-N-acetylgalactosamine metabolic process","termid":"GO:0019276"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5514","MetaCyc:PWY-8013","MetaCyc:PWY-5512"],"synonyms":[{"name":"UDP-N-acetylgalactosamine anabolism","type":"exact"},{"name":"UDP-N-acetylgalactosamine biosynthesis","type":"exact"},{"name":"UDP-N-acetylgalactosamine formation","type":"exact"},{"name":"UDP-N-acetylgalactosamine synthesis","type":"exact"}],"termid":"GO:0019277"}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: GO:0034922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxypyrene + O2 = phenanthrene-4,5-dicarboxylate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4,5-dihydroxypyrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034922"}


id: FYPO:0000381
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased macroautophagy","synonyms":[{"name":"autophagy: decreased","type":"broad"},{"name":"decreased autophagy","type":"broad"},{"name":"reduced macroautophagy","type":"exact"}],"termid":"FYPO:0000381"}


id: PBO:0089217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex SEL1/TPR repeat subunit","termid":"PBO:0089217"}


id: GO:1990572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that has RNA-directed RNA polymerase (RdRP) activity, and is composed of telomerase reverse transcriptase (TERT) and the non-coding RNA component of mitochondrial RNA processing endoribonuclease (RMRP).","definition_xrefs":["GOC:bf","PMID:19701182","GOC:BHF","GOC:nc","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TERT-RMRP complex","synonyms":[{"name":"telomerase reverse transcriptase:RMRP RNA complex","type":"exact"}],"termid":"GO:1990572"}


id: FYPO:0001383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA content","termid":"FYPO:0001383"}


id: PBO:0062451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 121 pseudogene","termid":"PBO:0062451"}


id: GO:0102708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-beta-alanine + S-adenosyl-L-methionine = H+ + N,N-dimethyl-beta-alanine + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:N-methyl-beta-alanine N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-6462"],"termid":"GO:0102708"}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: PBO:0026736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026736"}


id: PBO:0062272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 3 pseudogene","termid":"PBO:0062272"}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: GO:0102321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,2'-diol + O2 + NADH + H+ = biphenyl-2,2',3-triol + H2O + NAD.","definition_xrefs":["GOC:pz","RHEA:63512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,2'-hydroxybiphenyl monooxygenase activity","secondary_identifiers":["MetaCyc:MONOMER-17239","EC:1.14.13.44"],"termid":"GO:0102321"}


id: PBO:0036228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, malic enzyme with 2 frameshifts","termid":"PBO:0036228"}


id: PBO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 8B pseudogene","termid":"PBO:0062141"}


id: PBO:0065331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 55","termid":"PBO:0065331"}


id: PBO:0075066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-29","termid":"PBO:0075066"}


id: GO:0007306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the chorion portion of the egg, which is a protective, noncellular membrane that surrounds the eggs of various animals including insects and fish.","definition_xrefs":["PMID:24804966","ISBN:0879694238","GOC:mtg_sensu","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"egg chorion assembly","synonyms":[{"name":"eggshell chorion formation","type":"related"},{"name":"insect chorion formation","type":"related"}],"termid":"GO:0007306"}


id: PBO:0071347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 5","termid":"PBO:0071347"}


id: PBO:0029953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_secretion","termid":"PBO:0029953"}


id: PBO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26 copies of a 35 amino acid repeat","termid":"PBO:0036493"}


id: PATO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of how long the bearer has existed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"time","termid":"PATO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age","termid":"PATO:0000011"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: GO:0006387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sequence of enzymatic reactions resulting in the addition of a cap to the 5' end of a nascent snRNA transcript.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA capping (obsolete GO:0006387)","synonyms":[{"name":"snRNA capping","type":"exact"}],"termid":"GO:0006387"}


id: GO:0004536
data:
  {"annotated_genes":["SJAG_01044","SJAG_03675","SJAG_04752","SJAG_02556","SJAG_03994","SJAG_02828","SJAG_01173","SJAG_01262","SJAG_05237","SJAG_01832","SJAG_04410","SJAG_00623","SJAG_02298","SJAG_02908","SJAG_05280","SJAG_02031","SJAG_04183","SJAG_01163","SJAG_02818","SJAG_02708","SJAG_03734","SJAG_01948","SJAG_01648","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86509],"is_not":false,"summary":null,"term":"GO:0004536"},{"annotations":[114785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[101290,105182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[113153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[102001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"},{"annotations":[100240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[93226,84546,89090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[100241,103830,93227,84547,99285,97249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[97602,93023,90835,97250,59121,113154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[111735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004520"},{"annotations":[84702,106024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[93229,103831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[97251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990238"},{"annotations":[97252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[84705,103424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[93231,107651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"},{"annotations":[106102,86513,84706,106893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activity","termid":"GO:0004518"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01163":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02298":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02908":null,"SJAG_03675":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04410":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"DNA nuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-211247","Reactome:R-HSA-6785986","GO:0004537","Reactome:R-HSA-5685994"],"synonyms":[{"name":"caspase-activated deoxyribonuclease activity","type":"narrow"},{"name":"deoxyribonuclease activity","type":"exact"}],"termid":"GO:0004536","terms_by_termid":{"GO:0000014":null,"GO:0004520":null,"GO:0004536":null,"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0008821":null,"GO:0017108":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0048257":null,"GO:0051908":null,"GO:0106332":null,"GO:1990043":null,"GO:1990238":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0049092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 149","termid":"PBO:0049092"}


id: PBO:0111857
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN3 family co-repressor","termid":"PBO:0111857"}


id: PBO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate for chaperone activity assay","termid":"PBO:0001495"}


id: GO:0051566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3-glucoside + UDP-rhamnose = anthocyanidin 3-rutinoside + UDP.","definition_xrefs":["PMID:8130800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anthocyanidin-3-glucoside rhamnosyltransferase activity","synonyms":[{"name":"3RT activity","type":"broad"},{"name":"anthocyanidin 3-glucoside-rhamnosyltransferase activity","type":"exact"}],"termid":"GO:0051566"}


id: PBO:0064425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 3","termid":"PBO:0064425"}


id: PBO:0045497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSG1 antisense RNA 1","termid":"PBO:0045497"}


id: PBO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 21","termid":"PBO:0071883"}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: PBO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035858"}


id: FYPO:0002997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to MMS","type":"exact"},{"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002997"}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: GO:0008728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate.","definition_xrefs":["EC:2.7.6.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"GTP diphosphokinase activity","secondary_identifiers":["RHEA:22088","MetaCyc:GTPPYPHOSKIN-RXN"],"synonyms":[{"name":"(p)ppGpp synthetase I","type":"related"},{"name":"(p)ppGpp synthetase II","type":"related"},{"name":"ATP-GTP 3'-diphosphotransferase activity","type":"related"},{"name":"ATP:GTP 3'-diphosphotransferase activity","type":"related"},{"name":"GPSI","type":"related"},{"name":"GPSII","type":"related"},{"name":"GTP pyrophosphokinase activity","type":"exact"},{"name":"guanosine 3',5'-polyphosphate synthase activity","type":"related"},{"name":"guanosine 5',3'-polyphosphate synthetase activity","type":"related"},{"name":"guanosine pentaphosphate synthetase activity","type":"related"},{"name":"ppGpp synthetase I activity","type":"related"},{"name":"stringent factor activity","type":"related"}],"termid":"GO:0008728"}


id: PBO:0089993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13/Dhh1","termid":"PBO:0089993"}


id: GO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A location in the host cell nucleus where viral proteins colocalize late in infection prior to the onset of viral DNA synthesis. More than one site can be present simultaneously.","definition_xrefs":["PMID:10233976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"dense nuclear body","termid":"GO:0046818"}


id: PBO:0083536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C","termid":"PBO:0083536"}


id: GO:0010546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the Hsp90 molecular chaperone.","definition_xrefs":["PMID:11146632","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp90 protein inhibitor activity (obsolete GO:0010546)","synonyms":[{"name":"Hsp90 protein inhibitor activity","type":"exact"}],"termid":"GO:0010546"}


id: PBO:0080085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP46 divergent transcript","termid":"PBO:0080085"}


id: GO:0042615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to CD154, a receptor found on the surface of some activated lymphocytes.","definition_xrefs":["GOC:jl","ISBN:0120781859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CD154 receptor binding","synonyms":[{"name":"CD40 receptor activity","type":"related"},{"name":"CD40L binding","type":"exact"}],"termid":"GO:0042615"}


id: GO:0010432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bract over time, from its formation to the mature structure. A bract is a leaf, usually different in form from the foliage leaves, subtending a flower or inflorescence.","definition_xrefs":["GOC:tb","PO:0009055","PMID:16554366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bract development","termid":"GO:0010432"}


id: GO:0016649
data:
  {"annotated_genes":["SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces quinone or similar compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.5.-"],"termid":"GO:0016649","terms_by_termid":{"GO:0004657":null}}


id: PR:Q9UTE2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10755:SF0","PRO:DNx","OMA:SCHPO00382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxygen-dependent coproporphyrinogen-III oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.11","secondary_identifiers":["UniProtKB:Q9UTE2"],"synonyms":[{"name":"COX (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Coproporphyrinogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CPOX","type":"exact"},{"name":"coprogen oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTE2"}


id: PBO:0029186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_occurrence_of_activation_of_bipolar_cell_growth","termid":"PBO:0029186"}


id: GO:0098501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate groups from a polynucleotide.","definition_xrefs":["GOC:DOS"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide dephosphorylation (obsolete GO:0098501)","termid":"GO:0098501"}


id: GO:0003862
data:
  {"annotated_genes":["SJAG_03562"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102243],"is_not":false,"summary":null,"term":"GO:0003862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-carboxy-2-hydroxy-4-methylpentanoate + NAD+ = 3-carboxy-4-methyl-2-oxopentanoate + NADH + H+.","definition_xrefs":["RHEA:32271","EC:1.1.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03562":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3-ISOPROPYLMALDEHYDROG-RXN"],"synonyms":[{"name":"(2R,3S)-3-isopropylmalate:NAD+ oxidoreductase activity","type":"related"},{"name":"3-carboxy-2-hydroxy-4-methylpentanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"IMDH activity","type":"related"},{"name":"IPMDH","type":"related"},{"name":"beta-IPM dehydrogenase activity","type":"related"},{"name":"beta-isopropylmalate dehydrogenase activity","type":"related"},{"name":"beta-isopropylmalic enzyme","type":"related"},{"name":"threo-Ds-3-isopropylmalate dehydrogenase activity","type":"related"}],"termid":"GO:0003862","terms_by_termid":{"GO:0003862":null}}


id: PBO:0039520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 1","termid":"PBO:0039520"}


id: FYPO:0004195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type) during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to telomere during meiosis","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localisation to telomere during meiosis","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during meiosis","type":"exact"},{"name":"normal protein localization to telomere during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004195"}


id: PBO:0058098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4314","termid":"PBO:0058098"}


id: PBO:0110264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex large subunit Rpb1","termid":"PBO:0110264"}


id: PBO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 3","termid":"PBO:0045891"}


id: PBO:0091039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit F","termid":"PBO:0091039"}


id: FYPO:0000354
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115263,115248,115249,115260,115251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum morphology","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_01906","SJAG_03940","SJAG_00426","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta"],"synonyms":[{"name":"abnormal ER morphology","type":"exact"},{"name":"abnormal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum morphology during vegetative growth","type":"exact"},{"name":"endoplasmic reticulum morphology: abnormal","type":"related"}],"termid":"FYPO:0000354","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: GO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its protein kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont protein kinase-mediated signal transduction in response to host (obsolete GO:0075169)","termid":"GO:0075169"}


id: PBO:0025551
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined malonic and methylmalonic aciduria","termid":"PBO:0025551"}


id: PR:Q9USI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A stress-induced-phosphoprotein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04615","PRO:DNx","PANTHER:PTHR22904:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein sti1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.14c","secondary_identifiers":["UniProtKB:Q9USI5"],"synonyms":[{"name":"Spom972h-STIP1","type":"exact"}],"termid":"PR:Q9USI5"}


id: PBO:0065755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase, muscle associated","termid":"PBO:0065755"}


id: PBO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 2","termid":"PBO:0044204"}


id: PBO:0004144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp16","termid":"PBO:0004144"}


id: PR:O42921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase assembly factor 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein pet191 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.16","secondary_identifiers":["UniProtKB:O42921"],"synonyms":[{"name":"Spom972h-COA5","type":"exact"}],"termid":"PR:O42921"}


id: GO:0106183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of carbohydrates and their derivatives.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on carbohydrates and their derivatives. (obsolete GO:0106183)","secondary_identifiers":["EC:7.5.-.-"],"termid":"GO:0106183"}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["CL:0000623","GOC:add","GOC:mtg_apoptosis","PMID:15728472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: PBO:0066951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 253","termid":"PBO:0066951"}


id: PBO:0047905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q22.1)","termid":"PBO:0047905"}


id: GO:0032801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"receptor metabolic process","termid":"GO:0043112"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"receptor catabolic process","synonyms":[{"name":"receptor breakdown","type":"exact"},{"name":"receptor catabolism","type":"exact"},{"name":"receptor degradation","type":"exact"}],"termid":"GO:0032801"}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: GO:0015726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-idonate is transported across a lipid bilayer, from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-idonate transmembrane transport","synonyms":[{"name":"L-idonate transport","type":"related"}],"termid":"GO:0015726"}


id: PBO:0089733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set6","termid":"PBO:0089733"}


id: PBO:0084934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor, component of U4/U6.U5 tri-snRNP; interacts genetically and physically with Prp38p; relocalizes to the cytosol in response to hypoxia; temperature-sensitive phenotype of prp38-1 mutant can be suppressed by human homolog of SPP381, MFAP1","termid":"PBO:0084934"}


id: GO:0048347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate determination","termid":"GO:0048345"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate determination","termid":"GO:0048344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate determination","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate determination","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048347"}


id: GO:0062239
data:
  {"annotated_genes":["SJAG_03449","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85215,87455,115351],"is_not":false,"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to heterochromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"heterochromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"heterochromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-heterochromatin anchor activity","type":"exact"},{"name":"nuclear membrane-heterochromatin tether activity","type":"exact"}],"termid":"GO:0062239","terms_by_termid":{"GO:0062239":null}}


id: PBO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2B antisense RNA 1","termid":"PBO:0042576"}


id: PBO:0085672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; possible role in assembly of the dityrosine layer; similar to adjacent ORF, LOH1; irc18 loh1 double mutant exhibits reduced dityrosine fluorescence relative to single mutants; SWAT-GFP fusion protein localizes to the ER and vacuole, while mCherry fusion localizes to the vacuole; expression induced in respiratory-deficient cells and carbon-limited chemostat culture; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0085672"}


id: MOD:01688
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to one of the diastereomeric 3-hydroxy-L-asparagine residues.","definition_xrefs":["Unimod:35#N","OMSSA:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-asparagine","synonyms":[{"name":"3HyAsn","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationn","type":"exact"},{"name":"monohydroxylated asparagine","type":"exact"}],"termid":"MOD:01688"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PomBase:mah","PMID:12930956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000652","FYPO:0000661","FYPO:0000641","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: PBO:0030695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione-disulfide_reductase_activity","termid":"PBO:0030695"}


id: GO:0140533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the host's RNAi-mediated antiviral immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17693253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host RNAi-mediated antiviral immune response","synonyms":[{"name":"suppression of host RNAi-mediated antiviral immune response","type":"exact"},{"name":"suppression of host RNAi-mediated antiviral immunity","type":"exact"},{"name":"suppression of host RNAi-mediated gene silencing","type":"exact"}],"termid":"GO:0140533"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00145","SJAG_00666","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96215,98369],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[91259],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: GO:0070146
data:
  {"annotated_genes":["SJAG_04094"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114074],"is_not":false,"summary":null,"term":"GO:0070146"}]},"cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA in a mitochondrion, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0006520","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial aspartyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070146","terms_by_termid":{"GO:0070146":null}}


id: PBO:0043350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1 regulator of GABA type A receptor forward trafficking","termid":"PBO:0043350"}


id: GO:0160142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(746) in 23S rRNA = pseudouridine(746) in 23S rRNA.","definition_xrefs":["RHEA:42548","EC:5.4.99.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(746) synthase activity","termid":"GO:0160142"}


id: GO:0043839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosylmethionine (SAM) to the 1-phosphate group of lipid A.","definition_xrefs":["PMID:15994324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"lipid A phosphate methyltransferase activity","synonyms":[{"name":"LmtA","type":"related"},{"name":"lipid A 1-phosphomethyltransferase activity","type":"exact"},{"name":"lipid A methyltransferase","type":"broad"},{"name":"lipid A phosphomethyltransferase activity","type":"exact"}],"termid":"GO:0043839"}


id: GO:0042823
data:
  {"annotated_genes":["SJAG_00283","SJAG_00252","SJAG_01881","SJAG_01383","SJAG_00691","SJAG_00707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63448,83877,91598],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[88917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[111747,95769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[107892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-845"],"synonyms":[{"name":"active vitamin B6 biosynthesis","type":"exact"},{"name":"active vitamin B6 biosynthetic process","type":"exact"},{"name":"pyridoxal phosphate anabolism","type":"exact"},{"name":"pyridoxal phosphate biosynthesis","type":"exact"},{"name":"pyridoxal phosphate formation","type":"exact"},{"name":"pyridoxal phosphate synthesis","type":"exact"}],"termid":"GO:0042823","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: GO:0031588
data:
  {"annotated_genes":["SJAG_02785","SJAG_03501","SJAG_03802"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85343,112199,114240],"is_not":false,"summary":null,"term":"GO:0031588"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses nucleotide-dependent protein kinase activity. The nucleotide can be AMP (in S. pombe and human) or ADP (in S. cerevisiae).","definition_xrefs":["GOC:vw","GOC:mah","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02785":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleotide-activated protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-AMP-activated protein kinase complex","type":"narrow"},{"name":"ADP-activated protein kinase complex","type":"narrow"},{"name":"AMP-activated protein kinase complex","type":"narrow"},{"name":"AMPK complex","type":"related"},{"name":"SNF1/AMPK protein kinase complex","type":"narrow"},{"name":"Snf1 kinase complex","type":"narrow"},{"name":"Snf1 serine/threonine protein kinase complex","type":"narrow"}],"termid":"GO:0031588","terms_by_termid":{"GO:0031588":null}}


id: GO:0097335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quetiapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quetiapine","termid":"GO:0097335"}


id: PBO:0073251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 4","termid":"PBO:0073251"}


id: PBO:0083616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein light intermediate chain (LIC); localizes with dynein, null mutant is defective in nuclear migration","termid":"PBO:0083616"}


id: GO:0019481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine by transamination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-alanine catabolic process, by transamination","secondary_identifiers":["MetaCyc:ALANINE-DEG3-PWY"],"synonyms":[{"name":"L-alanine breakdown, by transamination","type":"exact"},{"name":"L-alanine degradation, by transamination","type":"exact"}],"termid":"GO:0019481"}


id: PBO:0067255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 329, pseudogene","termid":"PBO:0067255"}


id: PBO:0029527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation_during_cellular_response_to_cadmium_ion","termid":"PBO:0029527"}


id: PBO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family (predicted)","termid":"PBO:0002716"}


id: GO:0006875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of metal ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular metal ion homeostasis (obsolete GO:0006875)","synonyms":[{"name":"cellular heavy metal ion homeostasis","type":"narrow"},{"name":"cellular metal ion homeostasis","type":"exact"}],"termid":"GO:0006875"}


id: GO:0102806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanin betaine = shisonin + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8170"],"termid":"GO:0102806"}


id: PR:Q9UTD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yth1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein yth1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.08c","synonyms":[{"name":"Spom972h-yth1","type":"exact"}],"termid":"PR:Q9UTD1"}


id: GO:0047310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6/3,5-pentahydroxycyclohexanone + L-glutamine = 1-amino-1-deoxy-scyllo-inositol + 2-oxoglutaramate.","definition_xrefs":["RHEA:22920","EC:2.6.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glutamine-scyllo-inositol transaminase activity","secondary_identifiers":["KEGG_REACTION:R02781","MetaCyc:2.6.1.50-RXN"],"synonyms":[{"name":"L-glutamine-keto-scyllo-inositol aminotransferase activity","type":"related"},{"name":"L-glutamine-scyllo-inosose transaminase activity","type":"related"},{"name":"L-glutamine:2,4,6/3,5-pentahydroxycyclohexanone aminotransferase activity","type":"related"},{"name":"glutamine scyllo-inosose aminotransferase activity","type":"related"},{"name":"glutamine--scyllo-inosose aminotransferase activity","type":"related"},{"name":"glutamine--scyllo-inosose transaminase activity","type":"related"},{"name":"glutamine-scyllo-inosose aminotransferase activity","type":"exact"},{"name":"glutamine-scyllo-inosose transaminase activity","type":"exact"}],"termid":"GO:0047310"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: SO:1000125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000125 sequence_variant_causing_gain_of_function_of_polypeptide (obsolete SO:1000125)","synonyms":[{"name":"gain of function of polypeptide","type":"exact"},{"name":"mutation causing gain of function of polypeptide","type":"related"},{"name":"sequence variant causing gain of function of polypeptide","type":"exact"}],"termid":"SO:1000125"}


id: GO:1901425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a formic acid stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to formic acid","termid":"GO:1901425"}


id: PBO:0078285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 18-1","termid":"PBO:0078285"}


id: GO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage.","definition_xrefs":["GOC:add","PMID:16551251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte differentiation","termid":"GO:0002521"},{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid leukocyte differentiation","synonyms":[{"name":"myeloid leucocyte differentiation","type":"exact"}],"termid":"GO:0002573"}


id: GO:0008541
data:
  {"annotated_genes":["SJAG_00738","SJAG_02900","SJAG_02992","SJAG_03321","SJAG_01652","SJAG_04572","SJAG_04484","SJAG_01203","SJAG_03408","SJAG_04144","SJAG_04211","SJAG_00762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84997,90256,92494,93196,94891,95032,97730,98183,100426,105378,107291,111212,111321],"is_not":false,"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00738":null,"SJAG_00762":null,"SJAG_01203":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle, lid subcomplex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008541","terms_by_termid":{"GO:0008541":null}}


id: PBO:0089295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mannosidase Mnl1","termid":"PBO:0089295"}


id: PBO:0053491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 469","termid":"PBO:0053491"}


id: PBO:0013776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A1","termid":"PBO:0013776"}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0036078","PomBase:mah","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: PBO:0063133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0063133"}


id: PATO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality of a process","termid":"PATO:0001530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep pattern","termid":"PATO:0000062"}


id: FYPO:0005496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription from CRE promoter","synonyms":[{"name":"decreased transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes decreased","type":"related"},{"name":"reduced transcription from CRE promoter","type":"exact"}],"termid":"FYPO:0005496"}


id: GO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of any form of cell-based immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont cell-mediated immune response (obsolete GO:0052434)","synonyms":[{"name":"modulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"modulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052434"}


id: GO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"part_of","term_name":"thermoception","termid":"GO:0050955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in thermoception","synonyms":[{"name":"sensory detection of temperature stimulus during thermoception","type":"exact"},{"name":"sensory detection of thermal stimulus during thermoception","type":"exact"},{"name":"sensory transduction of temperature stimulus during thermoception","type":"exact"},{"name":"sensory transduction of thermal stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of temperature stimulus","type":"exact"},{"name":"thermoception, sensory detection of thermal stimulus","type":"exact"},{"name":"thermoception, sensory transduction of temperature stimulus","type":"exact"},{"name":"thermoception, sensory transduction of thermal stimulus","type":"exact"}],"termid":"GO:0050960"}


id: PBO:0090524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family DNA-dependent ATPase (human ERCC6) Rhp26","termid":"PBO:0090524"}


id: GO:0034686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta8 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alphav-beta8 complex","synonyms":[{"name":"ITGAV-ITGB8 complex","type":"narrow"},{"name":"alphav-beta8 integrin complex","type":"exact"}],"termid":"GO:0034686"}


id: PBO:0062121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 49 pseudogene","termid":"PBO:0062121"}


id: MOD:01603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2x(15)N labeled L-lysine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=609021|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(15)N labeled L-lysine","termid":"MOD:01603"}


id: PR:O13811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C17H9.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.14c","synonyms":[{"name":"Spom972h-pdi2","type":"exact"}],"termid":"PR:O13811"}


id: FYPO:0006052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"normal lipid droplet localization to FSM leading edge","type":"exact"},{"name":"normal lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"normal lipid particle localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006052"}


id: PBO:0040611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAIAP2 divergent transcript","termid":"PBO:0040611"}


id: PBO:0073004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel alpha subunit 4","termid":"PBO:0073004"}


id: MOD:00346
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-phenylalanine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-phenylalanine.","definition_xrefs":["PubMed:3936839","RESID:AA0341","PubMed:12696888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(S-L-cysteinyl)-D-phenylalanine","synonyms":[{"name":"(2S)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-phenylpropanoic acid","type":"exact"},{"name":"(2S,5R)-2,5-diamino-3-thia-2-phenylmethylhexanedioic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-D-phenylalanine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-D-phenylalanine (Cys-Phe)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-phenylalanine","type":"exact"}],"termid":"MOD:00346"}


id: GO:0042562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an hormone, a naturally occurring substance secreted by specialized cells that affect the metabolism or behavior of cells possessing functional receptors for the hormone. Hormones may be produced by the same, or different, cell as express the receptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hormone binding","termid":"GO:0042562"}


id: PBO:0054038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1374","termid":"PBO:0054038"}


id: GO:0007423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ development","synonyms":[{"name":"sense organ development","type":"exact"}],"termid":"GO:0007423"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: GO:0046645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell activation","synonyms":[{"name":"activation of gamma-delta T cell activation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte activation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell activation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte activation","type":"exact"},{"name":"stimulation of gamma-delta T cell activation","type":"narrow"},{"name":"up regulation of gamma-delta T cell activation","type":"exact"},{"name":"up-regulation of gamma-delta T cell activation","type":"exact"},{"name":"upregulation of gamma-delta T cell activation","type":"exact"}],"termid":"GO:0046645"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: PR:O74468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A siroheme synthase cysG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04916","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III C-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.06c","secondary_identifiers":["UniProtKB:O74468"],"synonyms":[{"name":"Spom972h-cysG","type":"exact"}],"termid":"PR:O74468"}


id: PR:O14125
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3A11.11c gene.","definition_xrefs":["UniProtKB:O14125","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C3A11.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.11c","synonyms":[{"name":"Spom972h-SPAC3A11.11c","type":"exact"}],"termid":"PR:O14125"}


id: GO:0102479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + UDP-D-galactose = quercetin 3-O-beta-D-galactopyranoside + UDP(3-) + H+.","definition_xrefs":["EC:2.4.1.234","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"quercetin 3-O-beta:-D-galactosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14109"],"termid":"GO:0102479"}


id: PBO:0087885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor, activator; role in cellular adjustment to osmotic stress including modulation of mating efficiency; involved in repression of subset of hypoxic genes by Rox1p, repression of several DAN/TIR genes during aerobic growth, ergosterol biosynthetic genes in response to hyperosmotic stress; contributes to recruitment of Tup1p-Cyc8p general repressor to promoters; relocalizes to cytosol under hypoxia; forms [MOT3+] prion under anaerobic conditions","termid":"PBO:0087885"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: PBO:0054529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1929","termid":"PBO:0054529"}


id: PBO:0029887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_stress_granule_assembly","termid":"PBO:0029887"}


id: PBO:0052834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-4","termid":"PBO:0052834"}


id: PBO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase (predicted)","termid":"PBO:0001784"}


id: GO:1903141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of endothelial barrier.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:24851274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell development","termid":"GO:1901551"},{"relation_name":"is_a","term_name":"regulation of establishment of endothelial barrier","termid":"GO:1903140"},{"relation_name":"negatively_regulates","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of endothelial barrier","synonyms":[{"name":"down regulation of establishment of endothelial barrier","type":"exact"},{"name":"down-regulation of establishment of endothelial barrier","type":"exact"},{"name":"downregulation of establishment of endothelial barrier","type":"exact"},{"name":"inhibition of establishment of endothelial barrier","type":"narrow"}],"termid":"GO:1903141"}


id: GO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity close to that of papain. As compared to cathepsin B, cathepsin L exhibits higher activity towards protein substrates, but has little activity on Z-Arg-Arg-NHMec, and no peptidyl-dipeptidase activity.","definition_xrefs":["EC:3.4.22.15"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin L activity (obsolete GO:0004217)","synonyms":[{"name":"Aldrichina grahami cysteine proteinase","type":"narrow"},{"name":"cathepsin L activity","type":"exact"}],"termid":"GO:0004217"}


id: PBO:0053387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 314","termid":"PBO:0053387"}


id: GO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-4,5-dicarboxylate + H+ = phenanthrene-4-carboxylate + CO2.","definition_xrefs":["UM-BBD_reactionID:r0937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenanthrene-4,5-dicarboxylate decarboxylase activity","termid":"GO:0034923"}


id: FYPO:0002310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GMP binding","termid":"FYPO:0002310"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PBO:0026632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation","termid":"PBO:0026632"}


id: GO:0007391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process during Drosophila embryogenesis whereby the ectodermal cells of the lateral epithelium stretch in a coordinated fashion to internalize the amnioserosa cells and close the embryo dorsally.","definition_xrefs":["PMID:9224720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure","termid":"GO:0007391"}


id: PBO:0054209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1589","termid":"PBO:0054209"}


id: FYPO:0002500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["GO:0018345","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein palmitoylation","synonyms":[{"name":"normal protein/peptide palmitoylation","type":"exact"}],"termid":"FYPO:0002500"}


id: PBO:0070587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 53","termid":"PBO:0070587"}


id: GO:0050169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptide tryptophan + O2 = peptide formylkynurenine.","definition_xrefs":["EC:1.13.11.26","MetaCyc:PEPTIDE-TRYPTOPHAN-23-DIOXYGENASE-RXN","PMID:4403729"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide-tryptophan 2,3-dioxygenase activity (obsolete GO:0050169)","synonyms":[{"name":"peptide-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"peptidyltryptophan 2,3-dioxygenase activity","type":"related"},{"name":"pyrrolooxygenase activity","type":"related"},{"name":"tryptophan pyrrolooxygenase activity","type":"related"}],"termid":"GO:0050169"}


id: PATO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part > n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has extra parts of type","secondary_identifiers":["PATO:0001560"],"synonyms":[{"name":"has extra parts of","type":"exact"},{"name":"has increased number of","type":"exact"},{"name":"having extra physical parts","type":"exact"},{"name":"having supernumerary physical parts","type":"exact"},{"name":"increased number of","type":"exact"}],"termid":"PATO:0002002"}


id: GO:0016814
data:
  {"annotated_genes":["SJAG_04156","SJAG_01673","SJAG_01054","SJAG_03771","SJAG_04681","SJAG_00106","SJAG_00376","SJAG_04123","SJAG_02400","SJAG_01997","SJAG_04711","SJAG_04380","SJAG_00352","SJAG_03275","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[85331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[104446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[113210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[86431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[83625,97224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[111087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[114997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[104417,108483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[103932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[100319,97191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00352":null,"SJAG_00376":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04156":null,"SJAG_04189":null,"SJAG_04380":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.4.-"],"termid":"GO:0016814","terms_by_termid":{"GO:0003876":null,"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004126":null,"GO:0004132":null,"GO:0004477":null,"GO:0004635":null,"GO:0008835":null,"GO:0008892":null,"GO:0043829":null,"GO:0052717":null}}


id: MOD:01880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0564","ChEBI:50038","PubMed:16452303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-deoxyhypusine","synonyms":[{"name":"(2S)-2-amino-6-[(4-aminobutyl)amino]hexanoic acid","type":"exact"},{"name":"L-deoxyhypusine","type":"exact"},{"name":"MOD_RES Deoxyhypusine","type":"exact"},{"name":"N6-(4-aminobutyl)lysine","type":"exact"},{"name":"deoxyhypusine","type":"exact"}],"termid":"MOD:01880"}


id: GO:0120206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The distal region of the photoreceptor connecting cilium is structurally unique to the photoreceptor and is maintained by retina-specific protein, SPATA7, and its interacting partners RPGR and RPGRIP1. It is essential for photoreceptor sensory cilium stability.","definition_xrefs":["PMID:29899041","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"photoreceptor connecting cilium","termid":"GO:0032391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor distal connecting cilium","synonyms":[{"name":"DCC","type":"related"},{"name":"photoreceptor DCC","type":"related"}],"termid":"GO:0120206"}


id: PBO:0080468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1A","termid":"PBO:0080468"}


id: PBO:0026989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_membrane_potential","termid":"PBO:0026989"}


id: PBO:0045327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 6","termid":"PBO:0045327"}


id: GO:0051923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a sulfate group to a molecule.","definition_xrefs":["Wikipedia:Sulfation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfation","synonyms":[{"name":"phase II metabolism","type":"broad"},{"name":"sulfonation","type":"exact"},{"name":"sulfur addition","type":"exact"},{"name":"sulphation","type":"exact"},{"name":"sulphur addition","type":"exact"}],"termid":"GO:0051923"}


id: GO:0032112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of protein histidine kinase activity","termid":"GO:0032110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein histidine kinase activity","synonyms":[{"name":"down regulation of protein histidine kinase activity","type":"exact"},{"name":"down-regulation of protein histidine kinase activity","type":"exact"},{"name":"downregulation of protein histidine kinase activity","type":"exact"},{"name":"inhibition of protein histidine kinase activity","type":"narrow"},{"name":"protein histidine kinase inhibitor","type":"related"}],"termid":"GO:0032112"}


id: GO:1901407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901407)","synonyms":[{"name":"regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901407"}


id: GO:0099576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of protein catabolic process at postsynapse, modulating synaptic transmission","termid":"GO:0099576"}


id: PBO:0049089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 pseudogene","termid":"PBO:0049089"}


id: FYPO:0000481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic recombination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic recombination","synonyms":[{"name":"abnormal mitotic recombination during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: abnormal","type":"related"}],"termid":"FYPO:0000481"}


id: PBO:0028051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_meiosis_II","termid":"PBO:0028051"}


id: PBO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional copper sensing transcription factor Cuf1","termid":"PBO:0000335"}


id: PBO:0058359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4732","termid":"PBO:0058359"}


id: PBO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031651"}


id: GO:1901044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:21324894"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1901044)","termid":"GO:1901044"}


id: GO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiol = S-adenosyl-L-homocysteine + a thioether.","definition_xrefs":["EC:2.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiol S-methyltransferase activity","secondary_identifiers":["MetaCyc:THIOL-S-METHYLTRANSFERASE-RXN","UM-BBD_enzymeID:e0146","RHEA:18277","Reactome:R-HSA-175976"],"synonyms":[{"name":"S-adenosyl-L-methionine:thiol S-methyltransferase activity","type":"related"},{"name":"TMT","type":"related"},{"name":"thiol methyltransferase activity","type":"related"}],"termid":"GO:0018708"}


id: MOD:00812
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an O-fucosylserine.","definition_xrefs":["PubMed:11067851","PubMed:1904059","Unimod:295#S","PubMed:3578767","PubMed:3311742","PubMed:12096136","PubMed:11344537","PubMed:1517205","PubMed:10734111","RESID:AA0404","PubMed:15189151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-fucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc)","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) serine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-fucosylserine","type":"exact"},{"name":"OFucSer","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00812"}


id: PR:O94324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk31 gene.","definition_xrefs":["UniProtKB:O94324","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.06c","synonyms":[{"name":"Spom972h-ppk31","type":"exact"},{"name":"meiotically up-regulated gene 25 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94324"}


id: GO:0036006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:yaf","PMID:14687666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to macrophage colony-stimulating factor","termid":"GO:0036005"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"cellular response to M-CSF stimulus","type":"exact"},{"name":"cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:0036006"}


id: GO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glycine by a cell, in which glycine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"glycine secretion","termid":"GO:0061536"},{"relation_name":"part_of","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycine secretion, neurotransmission","termid":"GO:0061537"}


id: PBO:0036352
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine INhibited","termid":"PBO:0036352"}


id: PBO:0109297
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization decreases protein concentration","termid":"PBO:0109297"}


id: FYPO:0004093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is normal (i.e. indistinguishable from wild type). Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["PomBase:mah","GO:0045141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic telomere clustering","synonyms":[{"name":"normal bouquet formation","type":"exact"}],"termid":"FYPO:0004093"}


id: PBO:0050849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 2","termid":"PBO:0050849"}


id: PBO:0065290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 4","termid":"PBO:0065290"}


id: PBO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S7","termid":"PBO:0060804"}


id: PBO:0080964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7A","termid":"PBO:0080964"}


id: GO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the force with which blood travels through the circulatory system that contributes to the acute phase response. The acute phase response occurs during the early phases of an infection and is marked by changes in the production of plasma proteins such as C-reactive protein.","definition_xrefs":["GOC:jal","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"part_of","term_name":"acute-phase response","termid":"GO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure involved in acute-phase response","synonyms":[{"name":"blood pressure regulation during acute phase response","type":"related"},{"name":"regulation of systemic arterial blood pressure during acute phase response","type":"related"}],"termid":"GO:0002530"}


id: PBO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral anterior homeobox 1","termid":"PBO:0080149"}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: PBO:0067294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 379, pseudogene","termid":"PBO:0067294"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: PBO:0026750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_nitrogen_starvation","termid":"PBO:0026750"}


id: PBO:0041767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 7","termid":"PBO:0041767"}


id: SO:1000042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant where a monocentric element is caused by the fusion of two chromosome arms.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound_chromosome","synonyms":[{"name":"compound chromosome","type":"exact"}],"termid":"SO:1000042"}


id: PBO:0088770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1","termid":"PBO:0088770"}


id: PATO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving little resistance to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft","termid":"PATO:0000387"}


id: PBO:0004566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus2 (predicted)","termid":"PBO:0004566"}


id: PBO:0002596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp41","termid":"PBO:0002596"}


id: PBO:0052026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 4","termid":"PBO:0052026"}


id: PBO:0075373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 10","termid":"PBO:0075373"}


id: SO:1000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_insertional_duplication","synonyms":[{"name":"(Drosophila)iDp","type":"related"},{"name":"inverted insertional duplication","type":"exact"}],"termid":"SO:1000153"}


id: PBO:0079916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 1","termid":"PBO:0079916"}


id: PBO:0059912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 35","termid":"PBO:0059912"}


id: GO:0021972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after decussation through the spinal cord in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","PMID:9878731","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through spinal cord","synonyms":[{"name":"corticospinal neuron axon pathfinding through spinal cord","type":"exact"}],"termid":"GO:0021972"}


id: FYPO:0004816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is lower than normal. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["PomBase:mah","SO:0000644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered antisense RNA level during vegetative growth","termid":"FYPO:0005857"},{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased antisense RNA level","synonyms":[{"name":"decreased antisense RNA accumulation","type":"related"},{"name":"decreased antisense RNA level during mitotic cell cycle","type":"related"},{"name":"decreased antisense RNA level during vegetative growth","type":"exact"},{"name":"decreased antisense RNA transcript level","type":"exact"},{"name":"decreased level of antisense transcripts","type":"exact"},{"name":"reduced antisense RNA level","type":"exact"}],"termid":"FYPO:0004816"}


id: FYPO:0008022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing alanine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on alanine nitrogen source","synonyms":[{"name":"abolished alanine utilization","type":"related"},{"name":"abolished growth on alanine nitrogen source","type":"broad"},{"name":"abolished vegetative cell population growth on alanine nitrogen source","type":"exact"},{"name":"cell population growth on alanine nitrogen source abolished","type":"exact"}],"termid":"FYPO:0008022"}


id: GO:0033355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cyclic series of interconversions involving L-ascorbate and glutathione that scavenges hydrogen peroxide and reduces it to water, with concomitant oxidation of NADPH.","definition_xrefs":["MetaCyc:PWY-2261","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione metabolic process","termid":"GO:0006749"},{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281","GO:0044248","GO:0006790","GO:0005975"],"is_obsolete":false,"name":"ascorbate glutathione cycle","synonyms":[{"name":"hydrogen peroxide detoxification","type":"related"}],"termid":"GO:0033355"}


id: PBO:0029071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0029071"}


id: PBO:0054597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2000","termid":"PBO:0054597"}


id: PBO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U","termid":"PBO:0061190"}


id: GO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell cytokine production","synonyms":[{"name":"regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002727"}


id: PBO:0056574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 2 pseudogene 1","termid":"PBO:0056574"}


id: PR:000036302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13","termid":"PR:000037485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC582.03","synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom-cdc13","type":"exact"}],"termid":"PR:000036302"}


id: PBO:0088677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class I glutamine amidotransferase family protein, conserved in fungi, bacteria, plants","termid":"PBO:0088677"}


id: GO:0097061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse organization","termid":"GO:0099173"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine organization","synonyms":[{"name":"dendritic spine organisation","type":"exact"}],"termid":"GO:0097061"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.215","EC:1.1.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: PATO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a slanting direction or position : neither perpendicular nor parallel.","definition_xrefs":["merriam-wester:http://www.merriam-webster.com/dictionary/oblique"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique orientation","termid":"PATO:0002481"}


id: GO:0072484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about spindle assembly is received and converted into a molecular signal, contributing to a spindle assembly checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in spindle assembly checkpoint (obsolete GO:0072484)","synonyms":[{"name":"sensing involved in spindle assembly checkpoint","type":"related"},{"name":"spindle assembly checkpoint sensor mechanism","type":"related"},{"name":"spindle assembly checkpoint sensor process","type":"related"}],"termid":"GO:0072484"}


id: PATO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic","synonyms":[{"name":"dysplasia","type":"narrow"}],"termid":"PATO:0000640"}


id: PBO:0044016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 epsilon","termid":"PBO:0044016"}


id: PBO:0068599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 50, pseudogene","termid":"PBO:0068599"}


id: GO:0034026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an L-amino acid + an L-amino acid = ADP + phosphate + L-aminoacyl-L-amino acid.","definition_xrefs":["EC:6.3.2.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-amino-acid alpha-ligase activity","secondary_identifiers":["RHEA:44332","MetaCyc:RXN-16296"],"synonyms":[{"name":"L-amino acid alpha-ligase activity","type":"exact"},{"name":"L-amino acid ligase activity","type":"exact"},{"name":"YwfE","type":"related"},{"name":"bacilysin synthetase activity","type":"exact"}],"termid":"GO:0034026"}


id: PBO:0110378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 4","termid":"PBO:0110378"}


id: PBO:0029118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_tapered_cell","termid":"PBO:0029118"}


id: GO:0150088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A single axon terminal bouton making contact onto two or more dendritic spines protruding from multiple dendrites.","definition_xrefs":["PMID:24487234","PMID:11248111","PMID:7482800","PMID:8366344","GOC:bc","GOC:aruk","PMID:10586883","PMID:22028887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple synapse bouton","termid":"GO:0150086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"multiple synapse bouton, contacting multiple dendrites","synonyms":[{"name":"MSB2","type":"exact"},{"name":"type 2 multi-synapse bouton","type":"exact"},{"name":"type 2 multi-synaptic bouton","type":"exact"},{"name":"type 2 multiple spine synapse bouton","type":"exact"},{"name":"type 2 multiple-synapse bouton","type":"exact"},{"name":"type 2 multisynapse bouton","type":"exact"},{"name":"type 2 multisynaptic bouton","type":"exact"}],"termid":"GO:0150088"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: PR:O74764
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX55 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24031:SF26","OMA:SCHPO03226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent rRNA helicase spb4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.02","secondary_identifiers":["UniProtKB:O74764"],"synonyms":[{"name":"Spom972h-DDX55","type":"exact"}],"termid":"PR:O74764"}


id: PBO:0069735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1016, pseudogene","termid":"PBO:0069735"}


id: PBO:0069828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1114, pseudogene","termid":"PBO:0069828"}


id: GO:0047436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aryl-2-methylmalonate + H+ = 2-arylpropionate + CO2.","definition_xrefs":["EC:4.1.1.76","RHEA:20513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arylmalonate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.76-RXN","KEGG_REACTION:R05173"],"synonyms":[{"name":"2-aryl-2-methylmalonate carboxy-lyase (2-arylpropanoate-forming)","type":"related"},{"name":"2-aryl-2-methylmalonate carboxy-lyase activity","type":"related"},{"name":"AMDASE","type":"related"},{"name":"AMDase activity","type":"related"}],"termid":"GO:0047436"}


id: FYPO:0007892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange at subtelomeric heterochromatin is increased. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:34731638","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased histone turnover at subtelomeric heterochromatin","termid":"FYPO:0007892"}


id: PBO:0034602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring_during_mitosis","termid":"PBO:0034602"}


id: PR:O14043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2C4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.10c","synonyms":[{"name":"Spom972h-csc4","type":"exact"}],"termid":"PR:O14043"}


id: GO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud development","termid":"GO:0001657"}


id: PBO:0090110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferasetRNA Trm44","termid":"PBO:0090110"}


id: PBO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_export","termid":"PBO:0031701"}


id: PBO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 1","termid":"PBO:0075319"}


id: GO:0034743
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC) and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP complex","termid":"GO:0034743"}


id: PBO:0057370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548al","termid":"PBO:0057370"}


id: PBO:0079127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 3","termid":"PBO:0079127"}


id: GO:0061852
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transporter complex that recognises, binds and returns endoplasmic reticulum (ER) resident proteins that have trafficked to Golgi compartments. Targets proteins lacking the HDEL motif recognised by COPI-coated vesicles.","definition_xrefs":["PMID:16093310","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retrograde transporter complex, Golgi to ER","synonyms":[{"name":"ERV41-ERV46 retrograde receptor complex","type":"narrow"},{"name":"retrograde receptor complex, Golgi to ER","type":"exact"},{"name":"retrograde receptor complex, Golgi to endoplasmic reticulum","type":"exact"},{"name":"retrograde transporter complex, Golgi to endoplasmic reticulum","type":"exact"}],"termid":"GO:0061852"}


id: PBO:0056324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 7","termid":"PBO:0056324"}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: GO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is secreted into extracellular space and found in mucosal areas or other tissues or circulating in the blood or lymph. In its canonical form, a circulating immunoglobulin complex is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms of are polymers of the basic structure and contain additional components such as J-chain and the secretory component.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"immunoglobulin complex, circulating","secondary_identifiers":["Wikipedia:Antibody"],"synonyms":[{"name":"antibody","type":"exact"}],"termid":"GO:0042571"}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: FYPO:0002448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Dsc E3 ubiquitin ligase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal Dsc complex assembly","synonyms":[{"name":"normal Dsc E3 ubiquitin ligase assembly","type":"exact"},{"name":"normal Dsc complex assembly during mitotic cell cycle","type":"related"},{"name":"normal Dsc complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002448"}


id: GO:0051731
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680","SJAG_03789","SJAG_00956","SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114583],"is_not":false,"summary":null,"term":"GO:0051731"},{"annotations":[84284,89801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[89567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"},{"annotations":[86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NTP + 5'-dephosphopolynucleotide = NDP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00956":null,"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-dephosphopolynucleotide kinase activity","type":"exact"},{"name":"5'-hydroxyl polynucleotide kinase activity","type":"exact"},{"name":"PNK","type":"related"},{"name":"polynucleotide 5'-hydroxy-kinase activity","type":"exact"},{"name":"polynucleotide 5'-hydroxyl kinase (phosphorylating) activity","type":"exact"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051731","terms_by_termid":{"GO:0046404":null,"GO:0051730":null,"GO:0051731":null,"GO:0051736":null}}


id: PBO:0078434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-4","termid":"PBO:0078434"}


id: PBO:0046624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 5","termid":"PBO:0046624"}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: GO:0099112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein driven by polymerization of a microtubule to which it is attached.","definition_xrefs":["GOC:vw","PMID:11018050","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule polymerization based protein transport","termid":"GO:0099112"}


id: GO:0005883
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"neurofilament","secondary_identifiers":["Wikipedia:Neurofilament","NIF_Subcellular:sao1316272517"],"synonyms":[{"name":"type IV intermediate filament","type":"exact"}],"termid":"GO:0005883"}


id: GO:0097666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Met30 in S. cerevisiae (Pof1 in S pombe).","definition_xrefs":["GOC:jd","GOC:vw","PMID:9499404","PMID:15147268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Met30/Pof1 ubiquitin ligase complex","termid":"GO:0097666"}


id: PBO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_benomyl","termid":"PBO:0031336"}


id: PR:O13351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmt3 gene.","definition_xrefs":["UniProtKB:O13351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein pmt3/smt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.06","synonyms":[{"name":"Spom972h-pmt3","type":"exact"}],"termid":"PR:O13351"}


id: GO:0102418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: luteolin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = luteolin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"luteolin-7-O-glucoside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13801"],"termid":"GO:0102418"}


id: PR:P36602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:14648198","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","termid":"PR:000036298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.05","secondary_identifiers":["PR:000027719","UniProtKB:P36602"],"synonyms":[{"name":"Spom972h-cdc22","type":"exact"}],"termid":"PR:P36602"}


id: FYPO:0004153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of flocculation when the population is in stationary phase. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PomBase:mah","PMID:15047724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased flocculation in stationary phase","termid":"FYPO:0004153"}


id: PR:P05734
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1901 gene.","definition_xrefs":["UniProtKB:P05734","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.02","synonyms":[{"name":"Spom972h-rpl1901","type":"exact"},{"name":"YL15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05734"}


id: GO:0034218
data:
  {"annotated_genes":["SJAG_00620","SJAG_04868","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87867,97588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall chitin metabolic process","termid":"GO:0006037"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide metabolic process","termid":"GO:0071966"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_03013":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"ascospore wall chitin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall chitin metabolism","type":"exact"}],"termid":"GO:0034218","terms_by_termid":{"GO:0034217":null,"GO:0034232":null}}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: PBO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein, implicated in trancriptional response to stress","termid":"PBO:0090194"}


id: PBO:0030234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001464)","termid":"PBO:0030234"}


id: PBO:0064862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 17","termid":"PBO:0064862"}


id: GO:1901479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of benomyl from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transmembrane transporter activity (obsolete GO:1901479)","synonyms":[{"name":"benomyl transporter activity","type":"related"}],"termid":"GO:1901479"}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:22521784","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: PBO:0003489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein (predicted)","termid":"PBO:0003489"}


id: PBO:0091023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type homeobox protein Pi","termid":"PBO:0091023"}


id: PBO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 31","termid":"PBO:0071613"}


id: GO:0170054
data:
  {"annotated_genes":["SJAG_00686","SJAG_04682","SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85828,100977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[88400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ribonuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease activator activity","type":"exact"}],"termid":"GO:0170054","terms_by_termid":{"GO:0044692":null,"GO:0061632":null}}


id: GO:1900017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in inflammatory response","termid":"GO:1900015"},{"relation_name":"positively_regulates","term_name":"cytokine production involved in inflammatory response","termid":"GO:0002534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production involved in inflammatory response","synonyms":[{"name":"positive regulation of cytokine production involved in acute inflammatory response","type":"narrow"},{"name":"up regulation of cytokine production involved in acute inflammatory response","type":"broad"},{"name":"up regulation of cytokine production involved in inflammatory response","type":"related"}],"termid":"GO:1900017"}


id: GO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of ecdysiostatic hormone, a peptide hormone that inhibits ecdysone secretion.","definition_xrefs":["DOI:10.1002/(SICI)1520-6327(1997)35:1","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ecdysiostatic hormone activity","termid":"GO:0016087"}


id: GO:0044736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transmembrane transfer of a sodium ion by a neuronal, voltage-insensitive channel that opens when an extracellular proton has been bound by the channel complex.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acid-sensing ion channel activity (obsolete GO:0044736)","synonyms":[{"name":"ASIC activity","type":"exact"}],"termid":"GO:0044736"}


id: FYPO:0008107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during stationary phase","termid":"FYPO:0008107"}


id: PBO:0086515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species","termid":"PBO:0086515"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: PBO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C pseudogene","termid":"PBO:0060616"}


id: GO:0018321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein glucuronylation","synonyms":[{"name":"protein amino acid glucuronylation","type":"exact"}],"termid":"GO:0018321"}


id: PBO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb1 (predicted)","termid":"PBO:0002094"}


id: FYPO:0005273
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115497,115168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115568,115569,115570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a cell cycle phase transition normally.","definition_xrefs":["GO:0044770","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle phase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_01330","SJAG_03575"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mad2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0005273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0071567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 33","termid":"PBO:0071567"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mengo_curators","PMID:23826995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PBO:0083182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the ORF YDL025C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083182"}


id: GO:0017178
data:
  {"annotated_genes":["SJAG_04544"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107226],"is_not":false,"summary":null,"term":"GO:0017178"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + diphthine + NH4 = ADP + diphthamide + H+ + phosphate.","definition_xrefs":["EC:6.3.1.14","RHEA:19753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"diphthine-ammonia ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03613","Reactome:R-HSA-5358475","MetaCyc:DIPHTINE--AMMONIA-LIGASE-RXN"],"synonyms":[{"name":"diphthamide synthase activity","type":"related"},{"name":"diphthamide synthetase activity","type":"related"},{"name":"diphthine:ammonia ligase (ADP-forming)","type":"related"}],"termid":"GO:0017178","terms_by_termid":{"GO:0017178":null}}


id: PBO:0043727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 6","termid":"PBO:0043727"}


id: FYPO:0000818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of M-factor, the mating pheromone produced by mating type minus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of M-factor in growth medium","synonyms":[{"name":"increased accumulation of M-factor in growth medium","type":"related"},{"name":"increased level of M-factor in growth medium","type":"exact"},{"name":"increased release of M-factor into growth medium","type":"related"}],"termid":"FYPO:0000818"}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: PBO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf1","termid":"PBO:0003676"}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature T cell becomes committed to becoming a CD4-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"is_a","term_name":"CD4-positive or CD8-positive, alpha-beta T cell lineage commitment","termid":"GO:0043369"},{"relation_name":"part_of","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell lineage commitment","synonyms":[{"name":"CD4-positive, alpha-beta T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0043373"}


id: PBO:0063936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 1","termid":"PBO:0063936"}


id: PBO:0034714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0034714"}


id: GO:0032884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cell wall chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin biosynthetic process","termid":"GO:0032883"},{"relation_name":"is_a","term_name":"regulation of cell wall chitin metabolic process","termid":"GO:0034222"},{"relation_name":"regulates","term_name":"cell wall chitin biosynthetic process","termid":"GO:0006038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall chitin biosynthetic process","synonyms":[{"name":"regulation of cell wall chitin anabolism","type":"exact"},{"name":"regulation of cell wall chitin biosynthesis","type":"exact"},{"name":"regulation of cell wall chitin formation","type":"exact"},{"name":"regulation of cell wall chitin synthesis","type":"exact"}],"termid":"GO:0032884"}


id: GO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in).","definition_xrefs":["GOC:curators","PMID:16371597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-8949688","Reactome:R-HSA-425661","Reactome:R-HSA-8949703","RHEA:29255"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"sodium/calcium exchanger","type":"exact"},{"name":"sodium:calcium exchange","type":"related"}],"termid":"GO:0005432"}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: PBO:0061332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member B10, pseudogene","termid":"PBO:0061332"}


id: PBO:0069003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 247, pseudogene","termid":"PBO:0069003"}


id: PBO:0051317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-1 (pseudogene)","termid":"PBO:0051317"}


id: PBO:0087791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; promotes attachment of small ubiquitin-related modifier sumo (Smt3p) to primarily cytoplasmic proteins; regulates Rsp5p ubiquitin ligase activity and is in turn itself regulated by Rsp5p; required for sumoylation of septins and histone H3 variant Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; localizes to the septin ring; acts as an adapter between E2, Ubc9p and substrates; tends to compensate for survival of DNA damage in absence of Nfi1p","termid":"PBO:0087791"}


id: FYPO:0004617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0036078","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased rate of microtubule depolymerization at minus end (obsolete FYPO:0004617)","synonyms":[{"name":"decreased microtubule stability","type":"related"},{"name":"increased microtubule depolymerization rate at minus end","type":"exact"},{"name":"increased microtubule minus end shrinkage","type":"related"},{"name":"increased rate of microtubule catastrophe at minus end","type":"related"},{"name":"increased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"increased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"increased rate of minus-end specific microtubule depolymerization","type":"exact"}],"termid":"FYPO:0004617"}


id: PBO:0044505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYTH1 pseudogene 1","termid":"PBO:0044505"}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: GO:0021840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that control the direction of migration of interneurons as a component of the process of migration from the subpallium to the cortex.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"interneuron migration from the subpallium to the cortex","termid":"GO:0021830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}


id: PBO:0041956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 2B","termid":"PBO:0041956"}


id: PBO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.8S ribosomal RNA","termid":"PBO:0004980"}


id: FYPO:0002464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis, elongated, and branched (and septated). Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, branched, curved, elongated cells (obsolete FYPO:0002464)","synonyms":[{"name":"inviable microcolony, branched, curved, elongated, septated vegetative cells","type":"exact"},{"name":"inviable microcolony, curved, branched, elongated cells","type":"exact"}],"termid":"FYPO:0002464"}


id: PBO:0062114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 13","termid":"PBO:0062114"}


id: GO:2000895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a hemicellulose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"hemicellulose catabolic process","synonyms":[{"name":"hemicellulose catabolism","type":"exact"}],"termid":"GO:2000895"}


id: PBO:0038464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCA3 pseudogene 1","termid":"PBO:0038464"}


id: PBO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox B","termid":"PBO:0050289"}


id: GO:0070290
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92035],"is_not":false,"summary":null,"term":"GO:0070290"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-1,2-diacyl-sn-glycero-3-phosphoethanolamine (NAPE) = a 1,2-diacyl-sn-glycero-3-phosphate + an N-acylethanolamine (NAE) + H+.","definition_xrefs":["RHEA:33159","PMID:15878693","PMID:14634025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acylphosphatidylethanolamine-specific phospholipase D activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.4.54","Reactome:R-HSA-2466831","MetaCyc:RXN-12116"],"synonyms":[{"name":"N-acyl-phosphatidylethanolamine-specific phospholipase D activity","type":"exact"},{"name":"NAPE-specific phospholipase D activity","type":"exact"}],"termid":"GO:0070290","terms_by_termid":{"GO:0070290":null}}


id: FYPO:0001997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: GO:0005469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + fumarate(in) = succinate(in) + fumarate(out).","definition_xrefs":["TC:2.A.29.13.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fumarate transmembrane transporter activity","termid":"GO:0015138"},{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"succinate:fumarate antiporter activity","secondary_identifiers":["RHEA:29323"],"termid":"GO:0005469"}


id: PR:Q9HDV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease PB2B2.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.01","synonyms":[{"name":"Spom972h-SPBPB2B2.01","type":"exact"}],"termid":"PR:Q9HDV2"}


id: PBO:0066980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 283","termid":"PBO:0066980"}


id: GO:1905815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dorsal/ventral axon guidance.","definition_xrefs":["GO_REF:0000058","PMID:18434533","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"dorsal/ventral axon guidance","termid":"GO:0033563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dorsal/ventral axon guidance","synonyms":[{"name":"regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"regulation of dorsoventral axon guidance","type":"exact"}],"termid":"GO:1905815"}


id: GO:0033006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell activation involved in immune response","synonyms":[{"name":"regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033006"}


id: PBO:0110161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine biosynthesis protein Tyw3","termid":"PBO:0110161"}


id: FYPO:0006798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the nuclear MIS12/MIND complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:29180432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000257"],"is_obsolete":false,"name":"normal nuclear MIS12/MIND complex binding","synonyms":[{"name":"normal nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"normal nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"}],"termid":"FYPO:0006798"}


id: GO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XVIII myosin heavy chain and associated light chains; myosin XVIII heavy chains contain an N-terminal PDZ domain.","definition_xrefs":["PMID:11294886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin XVIII complex","termid":"GO:0031488"}


id: PBO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 22","termid":"PBO:0060202"}


id: PBO:0040420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit d1","termid":"PBO:0040420"}


id: PBO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-L-fucose synthase","termid":"PBO:0048561"}


id: FYPO:0007719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abolished.","definition_xrefs":["PomBase:mah","PMID:33754639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished SMN complex assembly","synonyms":[{"name":"SMN complex assembly abolished","type":"exact"},{"name":"abolished SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007719"}


id: PBO:0065783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 3","termid":"PBO:0065783"}


id: GO:0008418
data:
  {"annotated_genes":["SJAG_00476","SJAG_00450"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66624,103025],"is_not":false,"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-asparaginyl-[protein] + H+ + H2O = N-terminal L-aspartyl-[protein] + NH4+. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.","definition_xrefs":["PMID:8910481","RHEA:50676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N-terminal asparagine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.1.121"],"termid":"GO:0008418","terms_by_termid":{"GO:0008418":null}}


id: PBO:0060125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 26","termid":"PBO:0060125"}


id: PBO:0091064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosylase Mag2","termid":"PBO:0091064"}


id: PBO:0109467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone dehydrogenase 2","termid":"PBO:0109467"}


id: PBO:0069027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 272, pseudogene","termid":"PBO:0069027"}


id: GO:1990093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The negative regulation of the receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:18442977"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of N-methyl-D-aspartate receptor clustering (obsolete GO:1990093)","synonyms":[{"name":"negative regulation of N-methyl-D-aspartate receptor clustering","type":"exact"},{"name":"negative regulation of NMDA receptor clustering","type":"exact"}],"termid":"GO:1990093"}


id: PBO:0076164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 2","termid":"PBO:0076164"}


id: GO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that modulates the rate or extent of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060868)","termid":"GO:0060868"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: PR:000036301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal-type cyclin-dependent kinase 1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"},{"relation_name":"is_a","term_name":"fungal-type cyclin-dependent kinase 1","termid":"PR:000037486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"CDK1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2","type":"exact"},{"name":"cdk1","type":"related"},{"name":"cell division control protein 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cell division protein kinase 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"p34 protein kinase (Schizosaccharomyces pombe)","type":"exact"},{"name":"pi002, SPBC11B10.09","type":"related"},{"name":"swo2","type":"related"}],"termid":"PR:000036301"}


id: GO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of renal sodium excretion","termid":"GO:0035813"}


id: PBO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Fizzy Related","termid":"PBO:0018261"}


id: PR:000029043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe 972h- protein","synonyms":[{"name":"Spom972h- protein","type":"exact"}],"termid":"PR:000029043"}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["DeltaMass:0","RESID:AA0010","PubMed:6692818","ChEBI:30009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: PBO:0066253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 1","termid":"PBO:0066253"}


id: GO:1990088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a [methyl-Co(III) methanol-specific corrinoid protein] + coenzyme M = methyl-coenzyme M + a [Co(I) methanol-specific corrinoid protein] + H+.","definition_xrefs":["PMID:10077852","RHEA:45208","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase","secondary_identifiers":["MetaCyc:RXN-8096","GO:0043851","EC:2.1.1.246"],"synonyms":[{"name":"methanol-specific methylcobalamin: coenzyme M methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:CoM methyltransferase activity","type":"exact"},{"name":"methanol-specific methylcobalamin:coenzyme M methyltransferase activity","type":"exact"},{"name":"methylcobamide:CoM methyltransferase activity","type":"broad"},{"name":"methylcobamide:coenzyme M methyltransferase activity","type":"broad"}],"termid":"GO:1990088"}


id: GO:0039688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses viral RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.","definition_xrefs":["GOC:bf","VZ:1938","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome replication","termid":"GO:0039693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"viral double stranded DNA replication via reverse transcription","synonyms":[{"name":"RNA-dependent viral DNA replication","type":"related"},{"name":"dsDNA replication via RNA intermediate","type":"exact"},{"name":"viral RNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039688"}


id: GO:0042780
data:
  {"annotated_genes":["SJAG_00195","SJAG_04885","SJAG_02993","SJAG_00997","SJAG_03761","SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88253,89113,94574,94575,95026,105968],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[79162,83890,105967,113950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[83891,113951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02993":null,"SJAG_03761":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing","type":"exact"}],"termid":"GO:0042780","terms_by_termid":{"GO:0001680":null,"GO:0042780":null,"GO:1990180":null}}


id: PBO:0047500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap structure-specific endonuclease 1 pseudogene 1","termid":"PBO:0047500"}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: GO:0018786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-haloalkane + H2O = a primary alcohol + halide.","definition_xrefs":["PMID:3624201","RHEA:19081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"haloalkane dehalogenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0003","EC:3.8.1.5","MetaCyc:HALOALKANE-DEHALOGENASE-RXN"],"synonyms":[{"name":"1-chlorohexane halidohydrolase activity","type":"related"},{"name":"1-haloalkane dehalogenase activity","type":"related"},{"name":"1-haloalkane halidohydrolase activity","type":"related"}],"termid":"GO:0018786"}


id: GO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Penetration by a symbiont into a host organism via naturally occurring openings in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete entry into host through natural portals (obsolete GO:0044410)","synonyms":[{"name":"entry into other organism through natural portals during symbiotic interaction","type":"related"},{"name":"entry into other organism through natural portals involved in symbiotic interaction","type":"related"}],"termid":"GO:0044410"}


id: GO:1900984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of vindoline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-5292"],"gene_count":0,"genotype_count":0,"name":"obsolete vindoline catabolic process (obsolete GO:1900984)","synonyms":[{"name":"vindoline breakdown","type":"exact"},{"name":"vindoline catabolism","type":"exact"},{"name":"vindoline degradation","type":"exact"}],"termid":"GO:1900984"}


id: PR:Q10251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.03","secondary_identifiers":["UniProtKB:Q10251"],"synonyms":[{"name":"Spom972h-EIF5B","type":"exact"},{"name":"eIF-5B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor IF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10251"}


id: PBO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rhp54 delta cells","termid":"PBO:0002176"}


id: PBO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA formyltransferase Fmt1 (predicted)","termid":"PBO:0001731"}


id: GO:0045861
data:
  {"annotated_genes":["SJAG_03048","SJAG_00052","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103013,86527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteolysis","type":"exact"},{"name":"down-regulation of proteolysis","type":"exact"},{"name":"downregulation of proteolysis","type":"exact"},{"name":"inhibition of proteolysis","type":"narrow"},{"name":"negative regulation of peptidolysis","type":"exact"}],"termid":"GO:0045861","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: SO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering the exon, at the 3' edge of the intron. A splice_site that is upstream_adjacent_to exon and finishes intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_cis_splice_site","synonyms":[{"name":"3' splice site","type":"related"},{"name":"acceptor","type":"related"},{"name":"acceptor splice site","type":"exact"},{"name":"splice acceptor site","type":"exact"},{"name":"three prime splice site","type":"exact"}],"termid":"SO:0000164"}


id: GO:0050523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors (obsolete GO:0050523)","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"exact"}],"termid":"GO:0050523"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: PR:000050584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-199 and Tyr-201 of the amino acid sequence represented by UniProtKB:P27638. Example:UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048.","definition_xrefs":["PMID:33823663","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spk1/Phos:(T199)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase spk1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spk1/Phos:1","type":"exact"},{"name":"UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048","type":"narrow"},{"name":"spk1/Phos:(T199)","type":"exact"}],"termid":"PR:000050584"}


id: PBO:0082554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central plaque component of spindle pole body (SPB); involved in SPB duplication, may facilitate attachment of the SPB to the nuclear membrane","termid":"PBO:0082554"}


id: GO:2000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"xyloglucan metabolic process","termid":"GO:0010411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of xyloglucan metabolic process","synonyms":[{"name":"regulation of xyloglucan metabolism","type":"exact"}],"termid":"GO:2000948"}


id: PBO:0039847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 15","termid":"PBO:0039847"}


id: PBO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INheritance of Peroxisomes","termid":"PBO:0003713"}


id: PBO:0026845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0026845"}


id: GO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the formation of branches in lateral roots.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"part_of","term_name":"lateral root morphogenesis","termid":"GO:0010102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral root branching","termid":"GO:0080181"}


id: GO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity.","definition_xrefs":["GOC:jid","UBERON:0001044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"exocrine system development","termid":"GO:0035272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland development","termid":"GO:0007431"}


id: GO:1902627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["PMID:22735702","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"regulation of 66S preribosome assembly","type":"narrow"},{"name":"regulation of 66S preribosome formation","type":"narrow"},{"name":"regulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902627"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: FYPO:0002809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased 6,7-dimethyl-8-ribityllumazine synthase activity","synonyms":[{"name":"reduced 6,7-dimethyl-8-ribityllumazine synthase activity","type":"exact"}],"termid":"FYPO:0002809"}


id: GO:0043224
data:
  {"annotated_genes":["SJAG_00341","SJAG_02591","SJAG_02651","SJAG_02162","SJAG_02822","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86723,90448,93867,100926,105147,106385],"is_not":false,"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the nucleus, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear SCF complex","type":"exact"},{"name":"nuclear Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"nuclear cullin complex","type":"exact"}],"termid":"GO:0043224","terms_by_termid":{"GO:0043224":null}}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: PBO:0067831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 133","termid":"PBO:0067831"}


id: PBO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 19, envelope","termid":"PBO:0046577"}


id: PBO:0028291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_arsenic","termid":"PBO:0028291"}


id: PBO:0069646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 923, pseudogene","termid":"PBO:0069646"}


id: GO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.","definition_xrefs":["GOC:rph","PMID:16903353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell junction","termid":"GO:0044156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell plasmodesma","termid":"GO:0044219"}


id: GO:0097731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).","definition_xrefs":["GOC:cilia","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"9+0 non-motile cilium","synonyms":[{"name":"9+0 immotile cilium","type":"exact"},{"name":"non-motile 9+0 cilium","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0097731"}


id: PBO:0076149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDS3 homolog, SIN3A corepressor complex component pseudogene 1","termid":"PBO:0076149"}


id: PBO:0082897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin, interacts with cyclin-dependent kinase Pho85p; member of the Pcl1,2-like subfamily, involved in the regulation of polarized growth and morphogenesis and progression through the cell cycle; is ubiquitinated by Dma1p; phosphorylation by Pho85p targets it for degradation; localizes to sites of polarized cell growth","termid":"PBO:0082897"}


id: FYPO:0000299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony (obsolete FYPO:0000299)","synonyms":[{"name":"inviable microcolony formation","type":"exact"},{"name":"microcolony formation","type":"broad"}],"termid":"FYPO:0000299"}


id: GO:1901576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance biosynthetic process (obsolete GO:1901576)","synonyms":[{"name":"organic molecular entity anabolism","type":"exact"},{"name":"organic molecular entity biosynthesis","type":"exact"},{"name":"organic molecular entity biosynthetic process","type":"exact"},{"name":"organic molecular entity formation","type":"exact"},{"name":"organic molecular entity synthesis","type":"exact"},{"name":"organic substance anabolism","type":"exact"},{"name":"organic substance biosynthesis","type":"exact"},{"name":"organic substance formation","type":"exact"},{"name":"organic substance synthesis","type":"exact"}],"termid":"GO:1901576"}


id: GO:0070153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling leucine to leucyl-tRNA in a mitochondrion, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucyl-tRNA aminoacylation","termid":"GO:0006429"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467","GO:0006520","GO:0140053"],"is_obsolete":false,"name":"mitochondrial leucyl-tRNA aminoacylation","termid":"GO:0070153"}


id: PBO:0041931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 2","termid":"PBO:0041931"}


id: GO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075078)","termid":"GO:0075078"}


id: PBO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1","termid":"PBO:0070386"}


id: GO:2000488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of brassinosteroid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"positively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of brassinosteroid biosynthetic process","synonyms":[{"name":"positive regulation of brassinosteroid anabolism","type":"exact"},{"name":"positive regulation of brassinosteroid biosynthesis","type":"exact"},{"name":"positive regulation of brassinosteroid formation","type":"exact"},{"name":"positive regulation of brassinosteroid synthesis","type":"exact"}],"termid":"GO:2000488"}


id: GO:1900397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"regulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900397"}


id: SO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus sequence GAAAGCT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDM3_motif","synonyms":[{"name":"NDM3","type":"exact"},{"name":"NDM3 motif","type":"exact"},{"name":"non directional motif 3","type":"exact"}],"termid":"SO:0001168"}


id: PR:P30290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mik1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor protein kinase mik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.14","synonyms":[{"name":"Spom972h-mik1","type":"exact"}],"termid":"PR:P30290"}


id: FYPO:0006645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during metaphase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during metaphase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006645"}


id: PBO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 2","termid":"PBO:0070330"}


id: PBO:0045761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylmalonyl-CoA decarboxylase 1","termid":"PBO:0045761"}


id: PBO:0046327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase 1","termid":"PBO:0046327"}


id: GO:0034086
data:
  {"annotated_genes":["SJAG_00600","SJAG_01601","SJAG_01805","SJAG_04126","SJAG_03681","SJAG_03989","SJAG_03926","SJAG_00229","SJAG_01082","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89899,109294,97350,100569,109853,97874,95211,110557,111958,103892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990813"}]},"cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate.","definition_xrefs":["PMID:14623866","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00600":null,"SJAG_01082":null,"SJAG_01601":null,"SJAG_01805":null,"SJAG_03681":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034086","terms_by_termid":{"GO:1990813":null}}


id: PBO:0059385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S22","termid":"PBO:0059385"}


id: GO:0019558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-histidine into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-histidine catabolic process","termid":"GO:0006548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-histidine catabolic process to 2-oxoglutarate","synonyms":[{"name":"histidine breakdown to 2-oxoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to 2-oxoglutarate","type":"broad"},{"name":"histidine catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"histidine catabolism to 2-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-ketoglutarate","type":"exact"},{"name":"histidine catabolism to alpha-oxoglutarate","type":"exact"},{"name":"histidine degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019558"}


id: GO:2000962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide metabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000962"}


id: PBO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector c","termid":"PBO:0043163"}


id: PBO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX10 antisense RNA 1","termid":"PBO:0075240"}


id: FYPO:0007017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA pseudouridylation, the intramolecular conversion of uridine to pseudouridine in a tRNA molecule, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0031119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA modification","termid":"FYPO:0001762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal tRNA pseudouridylation","synonyms":[{"name":"normal pseudouridine level in tRNA","type":"related"},{"name":"normal tRNA pseudouridine synthesis","type":"exact"},{"name":"normal tRNA pseudouridylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA pseudouridylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007017"}


