# terms

id: GO:0052006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the breakdown of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of substance in host (obsolete GO:0052006)","synonyms":[{"name":"catabolism by organism of substance in host","type":"exact"}],"termid":"GO:0052006"}


id: PBO:0075095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 144","termid":"PBO:0075095"}


id: GO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the metanephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron development","termid":"GO:0072210"}


id: GO:0031240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the outer membrane that is opposite to the side that faces the periplasm of the cell.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"cell outer membrane","termid":"GO:0009279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external side of cell outer membrane","synonyms":[{"name":"external leaflet of cell outer membrane","type":"exact"},{"name":"external side of outer membrane","type":"related"}],"termid":"GO:0031240"}


id: GO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucosides from one side of a membrane to the other. Glucosides are glycosides in which the sugar group is a glucose residue.","definition_xrefs":["GOC:mtg_transport","GOC:jl","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}


id: PBO:0068655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 36, pseudogene","termid":"PBO:0068655"}


id: PBO:0087632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; essential for the integrity and function of EGO; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0087632"}


id: PBO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_organization","termid":"PBO:0031031"}


id: GO:0009954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation","synonyms":[{"name":"proximal/distal pattern specification","type":"narrow"}],"termid":"GO:0009954"}


id: PBO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, ATP Km 1.9 mM","termid":"PBO:0011083"}


id: FYPO:0001268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"abnormal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001268"}


id: PBO:0053047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4 pseudogene","termid":"PBO:0053047"}


id: GO:0017013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a flavin group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein flavinylation","synonyms":[{"name":"protein amino acid flavinylation","type":"exact"}],"termid":"GO:0017013"}


id: FYPO:0003304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which formation of the mitotic spindle midzone, the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap, is abnormal.","definition_xrefs":["PomBase:mah","GO:0051256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle midzone assembly","synonyms":[{"name":"abnormal mitotic spindle midzone assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle midzone assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle midzone assembly involved in mitosis","type":"exact"}],"termid":"FYPO:0003304"}


id: GO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral nucleocapsid","secondary_identifiers":["GO:0019014"],"synonyms":[{"name":"core","type":"broad"},{"name":"nucleocapsid","type":"exact"}],"termid":"GO:0019013"}


id: PBO:0031293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_checkpoint_phenotype","termid":"PBO:0031293"}


id: PBO:0080801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 7","termid":"PBO:0080801"}


id: GO:1900347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from methanethiol","synonyms":[{"name":"activation of methane biosynthetic process from methanethiol","type":"narrow"},{"name":"up regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"up-regulation of methane biosynthetic process from methanethiol","type":"exact"},{"name":"upregulation of methane biosynthetic process from methanethiol","type":"exact"}],"termid":"GO:1900347"}


id: GO:0042685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate specification","termid":"GO:0060912"},{"relation_name":"part_of","term_name":"cardioblast cell fate commitment","termid":"GO:0042684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast cell fate specification","termid":"GO:0042685"}


id: GO:0019375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactolipids, any glycolipid containing one of more residues of galactose and/or N-acetylgalactosamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"galactolipid metabolic process","termid":"GO:0019374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"galactolipid biosynthetic process","synonyms":[{"name":"galactolipid anabolism","type":"exact"},{"name":"galactolipid biosynthesis","type":"exact"},{"name":"galactolipid formation","type":"exact"},{"name":"galactolipid synthesis","type":"exact"}],"termid":"GO:0019375"}


id: FYPO:0002967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to spindle pole body","termid":"FYPO:0001836"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to mitotic SPB","type":"exact"},{"name":"normal protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0002967"}


id: PBO:0049104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 1","termid":"PBO:0049104"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: FYPO:0006236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of monomeric ribosomes (80S monosomes) in the cytosol.","definition_xrefs":["PomBase:mah","PMID:18065650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cytosolic monomeric ribosome level","synonyms":[{"name":"cytosolic monomeric ribosomes present at normal level","type":"exact"},{"name":"normal cytosolic 80S monosome level","type":"exact"},{"name":"normal cytosolic monomeric 80S ribosome level","type":"exact"},{"name":"normal cytosolic monomeric ribosome level during mitotic cell cycle","type":"related"},{"name":"normal cytosolic monomeric ribosome level during vegetative growth","type":"exact"},{"name":"normal cytosolic ribosome level","type":"broad"},{"name":"normal level of cytosolic monomeric ribosomes","type":"exact"}],"termid":"FYPO:0006236"}


id: SO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from the same organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Autopolyploid"],"termid":"SO:0001255"}


id: PBO:0052590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 1","termid":"PBO:0052590"}


id: GO:1902326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["PMID:23555952","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of chlorophyll biosynthetic process","synonyms":[{"name":"up regulation of chlorophyll formation","type":"exact"},{"name":"up regulation of chlorophyll synthesis","type":"exact"},{"name":"activation of chlorophyll anabolism","type":"narrow"},{"name":"activation of chlorophyll biosynthesis","type":"narrow"},{"name":"activation of chlorophyll biosynthetic process","type":"narrow"},{"name":"activation of chlorophyll formation","type":"narrow"},{"name":"activation of chlorophyll synthesis","type":"narrow"},{"name":"positive regulation of chlorophyll anabolism","type":"exact"},{"name":"positive regulation of chlorophyll biosynthesis","type":"exact"},{"name":"positive regulation of chlorophyll formation","type":"exact"},{"name":"positive regulation of chlorophyll synthesis","type":"exact"},{"name":"up regulation of chlorophyll anabolism","type":"exact"},{"name":"up regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up-regulation of chlorophyll anabolism","type":"exact"},{"name":"up-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up-regulation of chlorophyll formation","type":"exact"},{"name":"up-regulation of chlorophyll synthesis","type":"exact"},{"name":"upregulation of chlorophyll anabolism","type":"exact"},{"name":"upregulation of chlorophyll biosynthesis","type":"exact"},{"name":"upregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"upregulation of chlorophyll formation","type":"exact"},{"name":"upregulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902326"}


id: PBO:0025504
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolman disease","termid":"PBO:0025504"}


id: PBO:0029764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_double-strand_break_site","termid":"PBO:0029764"}


id: PBO:0003842
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TOP2","termid":"PBO:0003842"}


id: PBO:0028498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ribosome_binding","termid":"PBO:0028498"}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PBO:0064131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor gamma","termid":"PBO:0064131"}


id: GO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The F-actin-rich core of an adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome core","termid":"GO:0061825"}


id: FYPO:0007549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the two DNA masses separated by mitotic anaphase remain linked by the nuclear bridge, and then merge back into a single nucleus.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"part_of","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"coalescence of partially separated nuclei","synonyms":[{"name":"coalescence of partially separated nuclei during mitotic cell cycle","type":"related"},{"name":"coalescence of partially separated nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0007549"}


id: PBO:0078444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 2","termid":"PBO:0078444"}


id: PBO:0076236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6","termid":"PBO:0076236"}


id: GO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the sinoatrial valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"sinoatrial valve morphogenesis","termid":"GO:0003185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve formation","synonyms":[{"name":"SA valve formation","type":"exact"}],"termid":"GO:0003194"}


id: PBO:0070937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 45","termid":"PBO:0070937"}


id: GO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocrine pancreas development","termid":"GO:0031018"}


id: PBO:0045839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 29","termid":"PBO:0045839"}


id: PBO:0088818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus4","termid":"PBO:0088818"}


id: PBO:0053641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 689","termid":"PBO:0053641"}


id: GO:0098574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"cytoplasmic side of lysosomal membrane","synonyms":[{"name":"external leaflet of lysosomal membrane","type":"exact"},{"name":"external side of lysosomal membrane","type":"exact"}],"termid":"GO:0098574"}


id: PATO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000836 auditory ability value (obsolete PATO:0000836)","termid":"PATO:0000836"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: PBO:0043410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 7","termid":"PBO:0043410"}


id: GO:0031582
data:
  {"annotated_genes":["SJAG_00247","SJAG_04671","SJAG_04855","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95445,98358,111078],"is_not":false,"summary":null,"term":"GO:0031582"},{"annotations":[99311],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic rDNA repeat spacer.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"},{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork arrest at rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"replication fork blocking at rDNA repeats","type":"exact"}],"termid":"GO:0031582","terms_by_termid":{"GO:0031582":null,"GO:1902681":null}}


id: GO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glomerular parietal epithelial cell. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}


id: PBO:0057423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548x-2","termid":"PBO:0057423"}


id: MOD:00313
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-palmitoleyl-L-cysteine.","definition_xrefs":["OMSSA:187","RESID:AA0308","Unimod:431#C","PubMed:8294460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"S-palmitoleylated residue","termid":"MOD:02002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-palmitoleyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-((Z)-9-hexadecenoylsulfanyl)propanoic acid","type":"exact"},{"name":"Palmitoleyl","type":"related"},{"name":"S-palmitoleyl-L-cysteine","type":"exact"},{"name":"S-palmitoleylated L-cysteine","type":"exact"},{"name":"SPamD1Cys","type":"exact"},{"name":"cis-9-hexadecenoate cysteine thioester","type":"exact"},{"name":"mod187","type":"exact"},{"name":"palmitoleyl","type":"related"}],"termid":"MOD:00313"}


id: PBO:0003235
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diamond Blackfan Anemia","termid":"PBO:0003235"}


id: GO:0006967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antifungal peptide production","termid":"GO:0002804"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002807"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"},{"relation_name":"positively_regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antifungal peptide biosynthetic process","synonyms":[{"name":"activation of antifungal peptide biosynthetic process","type":"narrow"},{"name":"antifungal peptide induction","type":"exact"},{"name":"antifungal polypeptide induction","type":"exact"},{"name":"stimulation of antifungal peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"upregulation of antifungal peptide biosynthetic process","type":"exact"}],"termid":"GO:0006967"}


id: PBO:0059209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 1","termid":"PBO:0059209"}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: PBO:0058530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6075","termid":"PBO:0058530"}


id: GO:0019600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in toluene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation","termid":"GO:0019600"}


id: FYPO:0006358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, does not occur when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","GO:0006338","PMID:28674280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin remodeling during glucose starvation","synonyms":[{"name":"abolished chromatin modeling during glucose starvation","type":"exact"},{"name":"abolished chromatin remodeling during glucose depletion","type":"exact"},{"name":"abolished chromatin remodeling during glucose deprivation","type":"related"},{"name":"abolished chromatin remodeling during glucose limitation","type":"related"},{"name":"abolished chromatin remodelling during glucose starvation","type":"exact"},{"name":"chromatin remodeling during glucose starvation abolished","type":"exact"}],"termid":"FYPO:0006358"}


id: PBO:0062037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 6","termid":"PBO:0062037"}


id: PBO:0084067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase component of U5 snRNP involved in mRNA splicing via spliceosome; binds directly to U5 snRNA; proposed to be involved in conformational changes of the spliceosome; similarity to ribosomal translocation factor EF-2","termid":"PBO:0084067"}


id: PBO:0064658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A","termid":"PBO:0064658"}


id: FYPO:0003211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which secondary cell septum biogenesis is abnormal. Secondary cell septum biogenesis results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of the secondary cell septum during cytokinesis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"abnormal secondary cell septum biogenesis","synonyms":[{"name":"abnormal secondary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"abnormal secondary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"abnormal secondary cell septum formation","type":"related"},{"name":"abnormal secondary cell septum synthesis","type":"related"},{"name":"abnormal secondary septum biogenesis","type":"exact"}],"termid":"FYPO:0003211"}


id: PBO:0059159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPED2 antisense RNA 1","termid":"PBO:0059159"}


id: GO:0045184
data:
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id: GO:0009158
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id: GO:0075335
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id: SO:0002026
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id: GO:0009675
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id: FYPO:0001002
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id: PBO:0052490
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id: GO:0033448
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id: PBO:0091504
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id: GO:0102517
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id: PBO:0028360
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id: PBO:0091288
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id: GO:0102600
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id: GO:1903494
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id: FYPO:0001933
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea. The most common abnormality is for the cell cycle to progress as in the absence of hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular response to hydroxyurea","termid":"FYPO:0001932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to hydroxyurea","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following hydroxyurea exposure","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to HU","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001933"}


id: GO:0019220
data:
  {"annotated_genes":["SJAG_04422","SJAG_03940","SJAG_05314","SJAG_00685","SJAG_01187","SJAG_02380","SJAG_01906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71987,75022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[111530,107433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108807,105800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[85820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[114027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03940":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate metabolism","type":"exact"}],"termid":"GO:0019220","terms_by_termid":{"GO:0043456":null,"GO:0045820":null,"GO:0071072":null,"GO:1905706":null,"GO:1905857":null,"GO:2001211":null}}


id: PBO:0064286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing S1","termid":"PBO:0064286"}


id: PBO:0084189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical (see also HTA1) subtypes; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p","termid":"PBO:0084189"}


id: GO:0048799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ maturation","termid":"GO:0048799"}


id: PBO:0109143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion Ema19","termid":"PBO:0109143"}


id: PBO:0031007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus","termid":"PBO:0031007"}


id: PATO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000211 muscle function (obsolete PATO:0000211)","termid":"PATO:0000211"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: SO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A clone of a DNA region of a genome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"genomic_DNA","termid":"SO:0000991"},{"relation_name":"is_a","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_clone","synonyms":[{"name":"genomic clone","type":"exact"}],"termid":"SO:0000040"}


id: GO:1990877
data:
  {"annotated_genes":["SJAG_02231","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92198,103210],"is_not":false,"summary":null,"term":"GO:1990877"}]},"cv_name":"cellular_component","definition":"A heterodimeric complex that functions as a GTPase-Activating Protein (GAP) Complex for members of the Rag family of GTPases. In the budding yeast, this complex contains Lst4 and Lst7, while the orthologous mammalian complex contains follicular (FLCN) and either follicular interacting protein 1 (FNIP1) or FNIP2.","definition_xrefs":["PMID:24095279","PMID:26387955","PMID:34805795","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activator complex","termid":"GO:1902773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02231":null,"SJAG_04910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FNIP-folliculin RagC/D GAP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"BFC complex","type":"exact"},{"name":"FLCN-FNIP1 complex","type":"exact"},{"name":"FLCN-FNIP2 complex","type":"exact"},{"name":"FNIP-Folliculin RagC/D GAP complex","type":"exact"},{"name":"Lst4-Lst7 complex","type":"exact"}],"termid":"GO:1990877","terms_by_termid":{"GO:1990877":null}}


id: PBO:0069936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1229, pseudogene","termid":"PBO:0069936"}


id: GO:0061276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric proximal tubule are generated and organized. The mesonephric proximal tubule extends from the capsule to the distal tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule development","termid":"GO:0061275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}


id: GO:1900896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane metabolic process","termid":"GO:1900899"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane biosynthetic process","synonyms":[{"name":"regulation of heptadecane anabolism","type":"exact"},{"name":"regulation of heptadecane biosynthesis","type":"exact"},{"name":"regulation of heptadecane formation","type":"exact"},{"name":"regulation of heptadecane synthesis","type":"exact"}],"termid":"GO:1900896"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: PBO:0077269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM9B antisense RNA 1","termid":"PBO:0077269"}


id: GO:1905153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane invagination.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:26589353","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane invagination","termid":"GO:1905153"}


id: GO:0042847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sorbose biosynthetic process","synonyms":[{"name":"sorbose anabolism","type":"exact"},{"name":"sorbose biosynthesis","type":"exact"},{"name":"sorbose formation","type":"exact"},{"name":"sorbose synthesis","type":"exact"}],"termid":"GO:0042847"}


id: PBO:0072654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8A","termid":"PBO:0072654"}


id: FYPO:0007473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange is abnormal during G0 phase. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","PMID:31315658","GO:0043486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone turnover during G0","synonyms":[{"name":"decreased histone exchange during G0 during cell quiescence","type":"exact"},{"name":"decreased histone exchange during G0 during quiescence","type":"exact"}],"termid":"FYPO:0007473"}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: PR:G2TRP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase protein 20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.18","synonyms":[{"name":"Spom972h-cox20","type":"exact"}],"termid":"PR:G2TRP9"}


id: FYPO:0003850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an oligomycin antibiotic.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on oligomycin","synonyms":[{"name":"normal cell population growth in presence of oligomycin","type":"exact"},{"name":"normal cell population growth on oligomycin","type":"exact"},{"name":"normal cellular response to oligomycin","type":"related"},{"name":"normal vegetative cell population growth on oligomycin","type":"exact"}],"termid":"FYPO:0003850"}


id: PBO:0069184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 438, pseudogene","termid":"PBO:0069184"}


id: GO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formate, also known as methanoate, the anion HCOO- derived from methanoic (formic) acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formate catabolic process","synonyms":[{"name":"formate breakdown","type":"exact"},{"name":"formate catabolism","type":"exact"},{"name":"formate degradation","type":"exact"},{"name":"formic acid catabolic process","type":"exact"},{"name":"formic acid catabolism","type":"exact"}],"termid":"GO:0042183"}


id: PBO:0059649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 15","termid":"PBO:0059649"}


id: PBO:0027794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027794"}


id: PBO:0082571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda1p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082571"}


id: GO:0021748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:jid","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal cochlear nucleus development","termid":"GO:0021748"}


id: PBO:0041183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 3","termid":"PBO:0041183"}


id: GO:0019134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucosamine 1-phosphate + acetyl-CoA = N-acetyl-alpha-D-glucosamine 1-phosphate + CoA + H+.","definition_xrefs":["RHEA:13725","EC:2.3.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glucosamine-1-phosphate N-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.157-RXN","KEGG_REACTION:R05332"],"synonyms":[{"name":"acetyl-CoA:D-glucosamine-1-phosphate N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:alpha-D-glucosamine-1-phosphate N-acetyltransferase activity","type":"related"}],"termid":"GO:0019134"}


id: GO:0008563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + alpha-factor(in) = ADP + phosphate + alpha-factor(out). The export of the alpha-factor sex pheromone by an ABC-type (ATP-binding cassette-type) ATPase, characterized by the presence of two similar ATP-binding domains, that does not undergo phosphorylation during the transport process.","definition_xrefs":["EC:3.6.3.48"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor sex pheromone exporter (obsolete GO:0008563)","synonyms":[{"name":"alpha-factor sex pheromone exporter","type":"exact"},{"name":"alpha-factor-transporting ATPase","type":"related"}],"termid":"GO:0008563"}


id: PBO:0053282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens intrinsic membrane protein 2","termid":"PBO:0053282"}


id: GO:0045858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that increases the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of molecular function, epigenetic (obsolete GO:0045858)","synonyms":[{"name":"activation of protein activity, epigenetic","type":"narrow"},{"name":"positive regulation of protein activity, epigenetic","type":"exact"},{"name":"stimulation of protein activity, epigenetic","type":"narrow"},{"name":"up regulation of protein activity, epigenetic","type":"exact"},{"name":"up-regulation of protein activity, epigenetic","type":"exact"},{"name":"upregulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0045858"}


id: PBO:0083560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1","termid":"PBO:0083560"}


id: PBO:0053443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 390","termid":"PBO:0053443"}


id: PBO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_spindle_microtubules_to_kinetochore","termid":"PBO:0031054"}


id: GO:0060525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a glandular acinus of the prostate gland over time, from its initial formation to the mature structure. The glandular acini are the saclike structures of the gland.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate glandular acinus development","termid":"GO:0060525"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: GO:0015841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of amines into, out of or within chromaffin granules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"chromaffin granule amine transport","termid":"GO:0015841"}


id: PBO:0080337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 101 pseudogene","termid":"PBO:0080337"}


id: GO:0044399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:tb","GOC:cc","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"},{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-species biofilm formation","secondary_identifiers":["GO:0090607","GO:0090608","GO:0044401","GO:0044400"],"synonyms":[{"name":"multi-species biofilm formation in or on host organism","type":"narrow"},{"name":"multi-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"multi-species submerged biofilm formation","type":"narrow"},{"name":"multi-species surface biofilm formation","type":"related"}],"termid":"GO:0044399"}


id: PBO:0064303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmolipin","termid":"PBO:0064303"}


id: GO:0034894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxypyridine + O2 + H+ + NADPH = pyridine-3,4-diol + H2O + NADP+.","definition_xrefs":["UM-BBD_reactionID:r1397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxypyridine-3-hydroxylase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0034894"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: PBO:0086168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation","termid":"PBO:0086168"}


id: PBO:0058416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4785","termid":"PBO:0058416"}


id: PBO:0048010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 8","termid":"PBO:0048010"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: GO:0044245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested polysaccharides into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polysaccharide digestion","termid":"GO:0044245"}


id: PBO:0064602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 3","termid":"PBO:0064602"}


id: GO:0070333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the adaptor proteins Shc and Grb2.","definition_xrefs":["PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Shc-Grb2 complex","synonyms":[{"name":"ITGA6-ITGB4-SHC-GRB2 complex","type":"narrow"}],"termid":"GO:0070333"}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: FYPO:0007614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"normal transcription from STREP promoter","synonyms":[{"name":"normal transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from STREP promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007614"}


id: PBO:0027199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_orientation_correction","termid":"PBO:0027199"}


id: GO:0051908
data:
  {"annotated_genes":["SJAG_01832","SJAG_01648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93229,103831],"is_not":false,"summary":null,"term":"GO:0051908"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"},{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_01832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0140097","GO:0016787","GO:0004527"],"is_obsolete":false,"name":"double-stranded DNA 5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.3"],"synonyms":[{"name":"double-stranded DNA 5'-3' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 5'-3' exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0051908","terms_by_termid":{"GO:0051908":null}}


id: PBO:0029779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated_vegetative_cell","termid":"PBO:0029779"}


id: PBO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 3, pseudogene","termid":"PBO:0070046"}


id: PR:O74796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- orc6 gene.","definition_xrefs":["UniProtKB:O74796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.12","synonyms":[{"name":"Spom972h-orc6","type":"exact"}],"termid":"PR:O74796"}


id: internal:misnomer
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misnomer","termid":"internal:misnomer"}


id: FYPO:0005087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at transfer RNA (tRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at tRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at tRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at tDNA","type":"exact"},{"name":"normal protein localization to chromatin at tRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at tRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005087"}


id: PBO:0003566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2 (predicted)","termid":"PBO:0003566"}


id: GO:1902356
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63904],"is_not":false,"summary":null,"term":"GO:1902356"},{"annotations":[84564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The directed movement of oxaloacetate(2-) across a membrane.","definition_xrefs":["PMID:18682385","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate transport","termid":"GO:0015729"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"oxaloacetate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1902356","terms_by_termid":{"GO:1902356":null,"GO:1990555":null}}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: GO:0008254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"3'-nucleotidase activity","secondary_identifiers":["MetaCyc:3-NUCLEOTID-RXN","RHEA:10144"],"synonyms":[{"name":"3' nucleotidase activity","type":"exact"},{"name":"3'-mononucleotidase activity","type":"related"},{"name":"3'-phosphatase activity","type":"related"},{"name":"3'-ribonucleotidase activity","type":"related"},{"name":"3'-ribonucleotide phosphohydrolase activity","type":"related"}],"termid":"GO:0008254"}


id: PBO:0039763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine phosphoribosyltransferase","termid":"PBO:0039763"}


id: GO:0043612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprene, C5H8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprene metabolic process","termid":"GO:0043611"},{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprene biosynthetic process","synonyms":[{"name":"2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"hemiterpene biosynthesis","type":"exact"},{"name":"hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:0043612"}


id: PBO:0040898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 1","termid":"PBO:0040898"}


id: SO:0000053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect which changes the regulatory region of a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000053 sequence_variant_affecting_regulatory_region (obsolete SO:0000053)","synonyms":[{"name":"mutation affecting regulatory region","type":"related"},{"name":"sequence variant affecting regulatory region","type":"exact"}],"termid":"SO:0000053"}


id: GO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052446)","synonyms":[{"name":"modulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"modulation by organism of symbiont defensive cell wall thickening","type":"related"}],"termid":"GO:0052446"}


id: PBO:0060624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 1 like","termid":"PBO:0060624"}


id: GO:0004402
data:
  {"annotated_genes":["SJAG_03537","SJAG_02165","SJAG_00676","SJAG_01204","SJAG_03546","SJAG_02773","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108711],"is_not":false,"summary":null,"term":"GO:0004402"},{"annotations":[114568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[86879,87515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105397,105398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide-lysine-N-acetyltransferase activity","termid":"GO:0061733"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0034212","GO:0003824","GO:0140096","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3321805","Reactome:R-HSA-5250938","GO:0004403","Reactome:R-HSA-3321883","MetaCyc:HISTONE-ACETYLTRANSFERASE-RXN","GO:0004405","GO:0004406","GO:0004404","GO:0043166","GO:0046971","Reactome:R-HSA-3318415","Reactome:R-HSA-3318413","Reactome:R-HSA-3321975","Reactome:R-HSA-3662318","Reactome:R-HSA-3697008","Reactome:R-HSA-5144542","Reactome:R-HSA-3662335","Reactome:R-HSA-3451147","RHEA:21992","Reactome:R-HSA-3301237","Reactome:R-HSA-3697920","Reactome:R-HSA-3301345","Reactome:R-HSA-3318486"],"synonyms":[{"name":"H2A/H2B histone acetyltransferase activity","type":"narrow"},{"name":"H3/H4 histone acetyltransferase activity","type":"narrow"},{"name":"H4/H2 histone acetyltransferase activity","type":"narrow"},{"name":"H4/H2A acetyltransferase activity","type":"narrow"},{"name":"acetyl-CoA:histone acetyltransferase activity","type":"related"},{"name":"histone acetokinase activity","type":"related"},{"name":"histone acetylase activity","type":"exact"},{"name":"histone lysine acetyltransferase activity","type":"exact"},{"name":"histone transacetylase activity","type":"related"},{"name":"nucleosome-histone acetyltransferase activity","type":"related"}],"termid":"GO:0004402","terms_by_termid":{"GO:0004402":null,"GO:0010484":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null}}


id: GO:0060792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sweat gland over time, from its formation to the mature structure. Sweat glands secrete an aqueous solution that is used in thermoregulation.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sweat gland development","termid":"GO:0060792"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: GO:0061953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine in mRNA = S-adenosyl-L-homocysteine + N(1)-methyladenine in mRNA.","definition_xrefs":["PMID:29072297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"mRNA (adenine-N1-)-methyltransferase activity","termid":"GO:0061953"}


id: PBO:0045143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF11 pseudogene 1","termid":"PBO:0045143"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: MOD:00791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to L-glutamic acid with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated L-glutamine","termid":"MOD:00685"},{"relation_name":"is_a","term_name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated L-glutamine","synonyms":[{"name":"Deamidated:18O(1)","type":"related"},{"name":"Deamidation in presence of O18","type":"related"}],"termid":"MOD:00791"}


id: FYPO:0005849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the chromosome than normal.","definition_xrefs":["PMID:27648579","PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of heterochromatin assembly","synonyms":[{"name":"decreased heterochromatin spreading","type":"related"},{"name":"decreased spatial extent of heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of heterochromatin assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of heterochromatin formation","type":"exact"},{"name":"reduced spatial extent of heterochromatin assembly","type":"exact"}],"termid":"FYPO:0005849"}


id: GO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075100)","termid":"GO:0075100"}


id: GO:0060163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which in the subpallium, the developmental fate of a cell becomes restricted such that it will develop into a neuron. The subpallium is the base region of the telencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"subpallium development","termid":"GO:0021544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium neuron fate commitment","synonyms":[{"name":"subpallium neuronal precursor fate commitment","type":"related"}],"termid":"GO:0060163"}


id: PBO:0038605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 2","termid":"PBO:0038605"}


id: PBO:0067852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 154","termid":"PBO:0067852"}


id: SO:1000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence variant at RNA level does not lead to any change in polypeptide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000089 sequence_variant_causing_no_change_of_translational_product (obsolete SO:1000089)","synonyms":[{"name":"mutation causing no change of translational product","type":"related"},{"name":"sequence variant causing no change of translational product","type":"exact"}],"termid":"SO:1000089"}


id: FYPO:0005488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to arsenite ions. Cells stop growing (and may die) at a concentration of arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to arsenite","synonyms":[{"name":"hypersensitive to arsenite","type":"exact"},{"name":"sensitive to arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenite during vegetative growth","type":"exact"},{"name":"sensitive to arsenite ions","type":"exact"}],"termid":"FYPO:0005488"}


id: PBO:0049258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-secretase activating protein","termid":"PBO:0049258"}


id: GO:1904724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane-enclosed lumen that is part of a tertiary granule.","definition_xrefs":["PMID:23650620","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"tertiary granule lumen","synonyms":[{"name":"gelatinase granule membrane-enclosed lumen","type":"related"},{"name":"membrane-enclosed lumen of gelatinase granule","type":"exact"},{"name":"membrane-enclosed lumen of tertiary granule","type":"exact"},{"name":"tertiary granule membrane-enclosed lumen","type":"exact"}],"termid":"GO:1904724"}


id: GO:0097431
data:
  {"annotated_genes":["SJAG_02761","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96453,114157],"is_not":false,"summary":null,"term":"GO:0097431"}]},"cv_name":"cellular_component","definition":"Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0072686","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097431","terms_by_termid":{"GO:0097431":null}}


id: MOD:01795
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 1x(13)C,3x(2)H C(6)-labeled L-methionine.","definition_xrefs":["PubMed:15782174","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"1x(13)C,3x(2)H labeled monomethylated residue","termid":"MOD:01794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H C(6)-labeled L-methionine","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"}],"termid":"MOD:01795"}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"increased free fatty acid accumulation","type":"related"}],"termid":"FYPO:0006714"}


id: GO:0000379
data:
  {"annotated_genes":["SJAG_01260","SJAG_04907","SJAG_00754","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96878,97415,101984,113710],"is_not":false,"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA-type intron splice site recognition and cleavage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000379","terms_by_termid":{"GO:0000379":null}}


id: PBO:0081105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB1 transcriptional regulator RNA","termid":"PBO:0081105"}


id: PBO:0109832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1 Rvb2","termid":"PBO:0109832"}


id: PBO:0073716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 3","termid":"PBO:0073716"}


id: PBO:0050995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 2","termid":"PBO:0050995"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["PMID:8380627","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: PR:O94613
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH-dependent diflavin oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00283","PRO:DNx","PANTHER:PTHR19384:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.06","secondary_identifiers":["UniProtKB:O94613"],"synonyms":[{"name":"NADPH-dependent FMN and FAD-containing oxidoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NDOR1","type":"exact"}],"termid":"PR:O94613"}


id: PBO:0012293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired protein 1","termid":"PBO:0012293"}


id: GO:0018557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxyfluorene + O2 = 2-hydroxy-4-(2-oxo-1,3-dihydro-2H-inden-1-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxyfluorene dioxygenase activity","termid":"GO:0019117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxyfluorene 1,1-alpha-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018557"}


id: PR:Q10346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F12.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.04c","synonyms":[{"name":"Spom972h-SPAC1F12.04c","type":"exact"}],"termid":"PR:Q10346"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: PBO:0017938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase involved in very long-chain fatty acid elongation Phs1 (predicted)","termid":"PBO:0017938"}


id: PBO:0110874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ (Hsp40) chaperone family protein","termid":"PBO:0110874"}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: PBO:0060987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGRN pseudogene 3","termid":"PBO:0060987"}


id: PBO:0059394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S27","termid":"PBO:0059394"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: PBO:0038601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 2","termid":"PBO:0038601"}


id: PBO:0048114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 2","termid":"PBO:0048114"}


id: PATO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A notched shape quality inhering in a bearer by virtue of the bearer's having a notched tip or edge.","direct_ancestors":[{"relation_name":"is_a","term_name":"notched","termid":"PATO:0001495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emarginate","termid":"PATO:0002234"}


id: GO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: baicalin + H2O = baicalein + D-glucuronate.","definition_xrefs":["GOC:mengo_curators","RHEA:28130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"baicalin beta-D-glucuronidase activity","secondary_identifiers":["KEGG_REACTION:R09533","MetaCyc:RXN-11760","EC:3.2.1.167"],"synonyms":[{"name":"5,6,7-trihydroxyflavone-7-O-beta-D-glucupyranosiduronate glucuronosylhydrolase activity","type":"related"},{"name":"baicalinase activity","type":"broad"}],"termid":"GO:0052748"}


id: GO:0031894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1A vasopressin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"V1A vasopressin receptor binding","synonyms":[{"name":"V1A vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031894"}


id: GO:0098620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ser-tRNA(Sec) + ATP = Sep-tRNA(Sec) + ADP.","definition_xrefs":["PMID:15317934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"seryl-selenocysteinyl-tRNA kinase activity","secondary_identifiers":["Reactome:R-HSA-2408507"],"termid":"GO:0098620"}


id: PBO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyocyte maturation associated lncRNA","termid":"PBO:0043915"}


id: PR:O74966
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein G that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.05","secondary_identifiers":["UniProtKB:O74966"],"synonyms":[{"name":"Sm protein G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmG (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPG","type":"exact"},{"name":"snRNP-G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74966"}


id: PBO:0040750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2","termid":"PBO:0040750"}


id: PBO:0072734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 4","termid":"PBO:0072734"}


id: PBO:0086659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene","termid":"PBO:0086659"}


id: PBO:0073686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signaling threshold regulating transmembrane adaptor 1","termid":"PBO:0073686"}


id: GO:1905754
data:
  {"annotated_genes":["SJAG_03638","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87954,109100],"is_not":false,"summary":null,"term":"GO:1905754"}]},"cv_name":"cellular_component","definition":"Any nucleus that is part of a ascospore-type prospore.","definition_xrefs":["PMID:26942678","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01867":null,"SJAG_03638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"ascospore-type prospore nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell nucleus of ascospore-type prospore","type":"exact"},{"name":"nucleus of ascospore-type prospore","type":"exact"}],"termid":"GO:1905754","terms_by_termid":{"GO:1905754":null}}


id: PBO:0053511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 499","termid":"PBO:0053511"}


id: FYPO:0007404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during mitosis","termid":"FYPO:0004198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein degradation during mitotic anaphase","synonyms":[{"name":"decreased protein breakdown during mitotic anaphase","type":"exact"},{"name":"decreased protein catabolic process during mitotic anaphase","type":"exact"},{"name":"decreased protein catabolism during mitotic anaphase","type":"exact"},{"name":"decreased protein degradation during anaphase of mitosis","type":"exact"},{"name":"decreased protein degradation during mitotic anaphase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007404"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PR:Q9P7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.06 gene.","definition_xrefs":["UniProtKB:Q9P7J9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.06","synonyms":[{"name":"Spom972h-SPCC24B10.06","type":"exact"}],"termid":"PR:Q9P7J9"}


id: PBO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2","termid":"PBO:0036472"}


id: PR:Q10070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.04c","synonyms":[{"name":"Spom972h-mdm31","type":"exact"}],"termid":"PR:Q10070"}


id: GO:1990714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of galactose from UDP-galactose to hydroxyproline residues present in the peptide backbone.","definition_xrefs":["PMID:25600942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyproline O-galactosyltransferase activity","synonyms":[{"name":"HPGT","type":"exact"}],"termid":"GO:1990714"}


id: GO:0038150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-C chemokine type 2 receptor (CCR2) on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"C-C chemokine receptor CCR2 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 2 signaling pathway","type":"exact"}],"termid":"GO:0038150"}


id: FYPO:0005510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"meiosis II metaphase/anaphase transition delay","synonyms":[{"name":"delayed cell cycle passage through meiosis II metaphase/anaphase transition","type":"exact"},{"name":"delayed metaphase/anaphase transition of meiosis II","type":"exact"},{"name":"delayed onset of meiotic anaphase II","type":"exact"},{"name":"increased duration of meiosis II metaphase","type":"related"},{"name":"increased duration of metaphase during meiosis II","type":"related"},{"name":"meiotic cell cycle delay at second metaphase/anaphase transition","type":"exact"},{"name":"metaphase/anaphase transition delay during meiosis II","type":"exact"},{"name":"metaphase/anaphase transition delay during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005510"}


id: PBO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 11","termid":"PBO:0045156"}


id: PBO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 8","termid":"PBO:0072586"}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["GOC:jsg","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: GO:0005794
data:
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id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: GO:1903751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18681888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901299"},{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902176"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"down regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"downregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"inhibition of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"negative regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:1903751"}


id: PBO:0077971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 23-1","termid":"PBO:0077971"}


id: PBO:0061151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 3","termid":"PBO:0061151"}


id: PBO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med19/Rox3","termid":"PBO:0005613"}


id: PBO:0070839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 18","termid":"PBO:0070839"}


id: GO:0018881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bromoxynil, C7H3Br2NO, a dibrominated phenol derivative with a cyano (-CN) group attached. Bromoxynil is used as a herbicide for post-emergent control of annual broadleaf weeds and works by inhibiting photosynthesis in the target plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bromoxynil metabolic process","secondary_identifiers":["UM-BBD_pathwayID:box"],"synonyms":[{"name":"bromoxynil metabolism","type":"exact"}],"termid":"GO:0018881"}


id: PBO:0061630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 13","termid":"PBO:0061630"}


id: GO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with a target membrane on another vesicle.","definition_xrefs":["PMID:16618809","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with vesicle","synonyms":[{"name":"vesicle to vesicle fusion","type":"exact"},{"name":"vesicle-vesicle fusion","type":"exact"}],"termid":"GO:0061782"}


id: GO:0006339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0006339)","synonyms":[{"name":"positive regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0006339"}


id: PBO:0040141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 4","termid":"PBO:0040141"}


id: GO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group catabolic process (obsolete GO:0046139)","synonyms":[{"name":"coenzyme and prosthetic group breakdown","type":"exact"},{"name":"coenzyme and prosthetic group catabolic process","type":"exact"},{"name":"coenzyme and prosthetic group catabolism","type":"exact"},{"name":"coenzyme and prosthetic group degradation","type":"exact"}],"termid":"GO:0046139"}


id: PBO:0031584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_centromere","termid":"PBO:0031584"}


id: PBO:0089367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Asr1","termid":"PBO:0089367"}


id: FYPO:0006979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular coenzyme Q10 level","synonyms":[{"name":"increased cellular UQ10 level","type":"exact"},{"name":"increased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"increased cellular ubiquinone 10 level","type":"exact"}],"termid":"FYPO:0006979"}


id: GO:0102356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (+)-isoitalicene.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"isoitalicene synthase activity","secondary_identifiers":["MetaCyc:RXN-13373"],"termid":"GO:0102356"}


id: PBO:0005018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain protein Btb1","termid":"PBO:0005018"}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: GO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate.","definition_xrefs":["RHEA:13201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glycine amidinotransferase activity","secondary_identifiers":["EC:2.1.4.1","MetaCyc:GLYCINE-AMIDINOTRANSFERASE-RXN","Reactome:R-HSA-71275"],"synonyms":[{"name":"L-arginine:glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine transamidinase activity","type":"related"},{"name":"glycine transamidinase activity","type":"related"}],"termid":"GO:0015068"}


id: FYPO:0000443
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[115405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003946"}],"single_locus_phenotype":[{"annotations":[115423,115424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115510,115512,115513,115514,115511,115515,115485,115491,115492,115494,115495,115484,115508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115320,115318,115397,115317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115406,115394,115395,115402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"},{"annotations":[115488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"},{"annotations":[115487],"is_not":false,"rel_names":["output_of","is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell in the vegetative growth phase of the life cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04280":null,"SJAG_04489":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_05207":null},"genotype_count":15,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_01050","SJAG_01143","SJAG_02392","SJAG_03892","SJAG_03596"],"name":"abnormal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_04489","SJAG_01143","SJAG_05207","SJAG_03892","SJAG_02392","SJAG_03783","SJAG_01050","SJAG_01745"],"single_locus_genotype_uniquenames":["cmp7delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","nur1delta","vps24delta","mid1delta","lem2delta","did4delta"],"synonyms":[{"name":"abnormal cellular protein localisation during vegetative growth","type":"exact"},{"name":"abnormal cellular protein localization during vegetative growth","type":"exact"},{"name":"abnormal protein localisation during vegetative growth","type":"exact"},{"name":"abnormal protein localization during mitotic cell cycle","type":"related"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0000443","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0002522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of polyadenylated mRNA from the nucleus is decreased. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"},{"relation_name":"is_a","term_name":"abnormal poly(A)+ mRNA export from nucleus","termid":"FYPO:0000183"},{"relation_name":"is_a","term_name":"decreased nuclear export","termid":"FYPO:0000508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"decreased polyadenylated mRNA export from nucleus","type":"exact"},{"name":"reduced poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0002522"}


id: PBO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl aminopeptidase","termid":"PBO:0046335"}


id: PBO:0071999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 1","termid":"PBO:0071999"}


id: PBO:0049440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 17","termid":"PBO:0049440"}


id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: GO:0140334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipopolysaccharide is transported to the cell outer membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide localization to cell outer membrane","synonyms":[{"name":"LPS localization to cell outer membrane","type":"exact"}],"termid":"GO:0140334"}


id: GO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005569)","synonyms":[{"name":"small nucleolar RNA","type":"exact"}],"termid":"GO:0005569"}


id: GO:0141088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the activation of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"symbiont-mediated activation of host autophagy","synonyms":[{"name":"induction of host autophagy","type":"exact"},{"name":"positive regulation by symbiont of host autophagy","type":"exact"}],"termid":"GO:0141088"}


id: GO:0018877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2,3,4,5,6-hexachlorocyclohexane, a halogenated organic insecticide that has been used worldwide for agriculture and public health.","definition_xrefs":["UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexachlorocyclohexane metabolic process","termid":"GO:0019497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolic process","synonyms":[{"name":"beta-1,2,3,4,5,6-hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0018877"}


id: GO:0048103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell division","synonyms":[{"name":"somatic stem cell renewal","type":"exact"}],"termid":"GO:0048103"}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: PBO:0111528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 8","termid":"PBO:0111528"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["Pfam:PF00632","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: GO:1903646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["GO_REF:0000058","PMID:24375412","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein folding","termid":"GO:1903334"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein folding","termid":"GO:1903644"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"positively_regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated protein folding","synonyms":[{"name":"activation of chaperone-mediated protein folding","type":"narrow"},{"name":"up regulation of chaperone-mediated protein folding","type":"exact"},{"name":"up-regulation of chaperone-mediated protein folding","type":"exact"},{"name":"upregulation of chaperone-mediated protein folding","type":"exact"}],"termid":"GO:1903646"}


id: PBO:0068114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 421","termid":"PBO:0068114"}


id: PBO:0073132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 4","termid":"PBO:0073132"}


id: GO:0062197
data:
  {"annotated_genes":["SJAG_02135","SJAG_00596","SJAG_01292","SJAG_04311","SJAG_03653","SJAG_04788","SJAG_06611","SJAG_00661","SJAG_02495","SJAG_00984","SJAG_02858","SJAG_02945","SJAG_00419","SJAG_00668","SJAG_00027","SJAG_02091","SJAG_01216","SJAG_03893","SJAG_01855","SJAG_01162","SJAG_02515","SJAG_05181","SJAG_03185","SJAG_03330","SJAG_03924","SJAG_03414","SJAG_02573","SJAG_04403","SJAG_00996","SJAG_03903","SJAG_03896","SJAG_04125","SJAG_04632","SJAG_04823","SJAG_00409","SJAG_02044","SJAG_02485","SJAG_03303","SJAG_04399","SJAG_04063","SJAG_06621","SJAG_04287","SJAG_01199","SJAG_06622","SJAG_02592","SJAG_04726","SJAG_04036","SJAG_03828","SJAG_02342","SJAG_00141","SJAG_01084","SJAG_04668","SJAG_04953","SJAG_04205","SJAG_02249","SJAG_02883","SJAG_01734","SJAG_02433","SJAG_03166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104898,114304,96075,101100,91295,113405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[88502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[98301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071500"},{"annotations":[112342,113122,100600,102557,110525,87987,90465,106408,92075,98874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[72305,87006,74135,97936,110526,110799,105000,105006,89660,92092,89357,97418,105004,97883,91669,105001,109570,86220,86320,93717,105002,112783,67392,101282,105003,85533,97070,94048,103874,105005,90466,84713,88256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[96076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[96250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[89225,106160,85534,96236,106205,58058,95357,67563,64543,85121],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus indicating the organism is under stress.","definition_xrefs":["PMID:26653712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00409":null,"SJAG_00419":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02091":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02342":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02883":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03185":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04063":null,"SJAG_04125":null,"SJAG_04205":null,"SJAG_04287":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chemical stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0062197","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071500":null}}


id: GO:2000671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron apoptotic process","synonyms":[{"name":"regulation of motoneuron apoptosis","type":"exact"},{"name":"regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000671"}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: GO:0098925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by nitric oxide","termid":"GO:0098924"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0099555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by nitric oxide, modulating synaptic transmission","termid":"GO:0098925"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: PBO:0056157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mono-ADP ribosylhydrolase 2","termid":"PBO:0056157"}


id: PBO:0030957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0030957"}


id: GO:1990236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the proteasome core complex (AKA core particle (CP)) from the cytoplasm into the nucleus.","definition_xrefs":["PMID:23982732","GOC:dos","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"proteasome core complex import into nucleus","termid":"GO:1990236"}


id: PBO:0068367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 150","termid":"PBO:0068367"}


id: PBO:0070476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 11","termid":"PBO:0070476"}


id: GO:0046369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactose, the aldohexose galacto-hexose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactose biosynthetic process","synonyms":[{"name":"galactose anabolism","type":"exact"},{"name":"galactose biosynthesis","type":"exact"},{"name":"galactose formation","type":"exact"},{"name":"galactose synthesis","type":"exact"}],"termid":"GO:0046369"}


id: GO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ankyrin repeat of a protein. Ankyrin repeats are tandemly repeated modules of about 33 amino acids; each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90-degree angle, and repeats stack to form an L-shaped structure.","definition_xrefs":["InterPro:IPR002110","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ankyrin repeat binding","synonyms":[{"name":"ANK repeat binding","type":"exact"}],"termid":"GO:0071532"}


id: PBO:0077346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87A","termid":"PBO:0077346"}


id: GO:0071231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to folic acid","synonyms":[{"name":"response to folate","type":"exact"},{"name":"response to vitamin B9","type":"exact"}],"termid":"GO:0071231"}


id: RO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-chemical-role r iff c has-role r and r is a chemical role (CHEBI:51086)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_chemical_role","termid":"RO:0002262"}


id: PBO:0110828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type, Loz1","termid":"PBO:0110828"}


id: PBO:0084298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; a secreted, glycosylated form is regulated by glucose repression, and an intracellular, nonglycosylated enzyme is produced constitutively","termid":"PBO:0084298"}


id: GO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"apolipoprotein receptor activity","termid":"GO:0030226"}


id: GO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose binding lectin (obsolete GO:0005531)","synonyms":[{"name":"galactose binding lectin","type":"exact"}],"termid":"GO:0005531"}


id: PBO:0074607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 12","termid":"PBO:0074607"}


id: PBO:0041256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 210","termid":"PBO:0041256"}


id: GO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular amino acid biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100025)","termid":"GO:0100025"}


id: PR:Q10319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A YEATS domain-containing protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein AF-9 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.07","secondary_identifiers":["UniProtKB:Q10319"],"synonyms":[{"name":"Spom972h-YEATS4","type":"exact"}],"termid":"PR:Q10319"}


id: PBO:0081955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 2","termid":"PBO:0081955"}


id: PBO:0041158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 13","termid":"PBO:0041158"}


id: PR:P78831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.14","synonyms":[{"name":"Spom972h-ght5","type":"exact"},{"name":"hexose transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78831"}


id: GO:0035029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to leading edge cell fate during dorsal closure. Leading edge cells are the dorsal-most cells of the migrating epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate commitment","termid":"GO:0035027"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}


id: MOD:01725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01725"}


id: PBO:0005305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein","termid":"PBO:0005305"}


id: SO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA comprising an extended inverted repeat, the stem of which is typically much longer than that of miRNA precursors and can be up to 400 base pairs in length. hpRNAs are processed by Dicer-2 to generate endogenous short interfering RNAs (siRNAs).","definition_xrefs":["PMID:18463630","PMID:18719707","PMID:25544562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hpRNA","synonyms":[{"name":"Hairpin RNA","type":"exact"}],"termid":"SO:0002356"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["EC:3.2.1.78","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannan 1,3-beta-mannosidase activity","synonyms":[{"name":"1,3-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,3-mannan 3-mannanohydrolase activity","type":"related"},{"name":"exo-1,3-beta-mannanase activity","type":"related"},{"name":"exo-1,3-mannanase activity","type":"related"},{"name":"exo-beta-1,3-mannase activity","type":"related"}],"termid":"GO:0052789"}


id: GO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cytokinesis by cell plate formation","termid":"GO:0000911"}


id: GO:0062195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","termid":"GO:0062195"}


id: PBO:0042563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 5","termid":"PBO:0042563"}


id: FYPO:0009023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on methionine nitrogen source","synonyms":[{"name":"decreased growth on methionine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on methionine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with methionine nitrogen source","type":"related"},{"name":"reduced cell growth on methionine nitrogen source","type":"related"},{"name":"slow cell growth on methionine nitrogen source","type":"narrow"}],"termid":"FYPO:0009023"}


id: PBO:0068342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113B","termid":"PBO:0068342"}


id: PBO:0086333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton-coupled oligopeptide transporter of the plasma membrane; also transports glutathione and phytochelatin; member of the OPT family","termid":"PBO:0086333"}


id: GO:0031420
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030955"}]},"cv_name":"molecular_function","definition":"Binding to an alkali metal ion; alkali metals are those elements in group Ia of the periodic table, with the exception of hydrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkali metal ion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031420","terms_by_termid":{"GO:0030955":null}}


id: GO:1900110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 dimethylation (obsolete GO:1900110)","synonyms":[{"name":"down regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"downregulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"inhibition of histone H3 K9 dimethylation","type":"narrow"},{"name":"inhibition of histone H3-K9 dimethylation","type":"narrow"},{"name":"inhibition of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"negative regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"negative regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900110"}


id: MOD:00204
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to D-leucine.","definition_xrefs":["PubMed:12135762","ChEBI:30005","PubMed:1358533","PubMed:1548227","PubMed:10461743","RESID:AA0197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-leucine","synonyms":[{"name":"(2R)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"D-Leu","type":"exact"},{"name":"D-leucine","type":"exact"},{"name":"MOD_RES D-leucine","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00204"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: GO:0002571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of variable numbers of random nucleotides by terminal deoxytransferase in the N regions of T cell receptor genes. N regions are found at the V-D, D-D, V-J, and D-J recombinational junctions, depending on the T cell receptor gene.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of T cell receptor genes","termid":"GO:0002568"},{"relation_name":"is_a","term_name":"somatic diversification of immune receptors by N region addition","termid":"GO:0002569"},{"relation_name":"part_of","term_name":"somatic recombination of T cell receptor gene segments","termid":"GO:0002681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes by N region addition","synonyms":[{"name":"somatic diversification of TCR genes by N region addition","type":"exact"}],"termid":"GO:0002571"}


id: GO:0048254
data:
  {"annotated_genes":["SJAG_00752","SJAG_05223"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94045,113701],"is_not":false,"summary":null,"term":"GO:0048254"}]},"cv_name":"biological_process","definition":"Any process in which small nucleolar RNA is transported to, or maintained in, a specific location.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"snoRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of snoRNA localization","type":"exact"},{"name":"small nucleolar RNA localization","type":"exact"},{"name":"snoRNA localisation","type":"exact"}],"termid":"GO:0048254","terms_by_termid":{"GO:0048254":null}}


id: PBO:0066228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 34","termid":"PBO:0066228"}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: PBO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Rrp5 (predicted)","termid":"PBO:0005214"}


id: GO:0035721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of large protein complexes along microtubules from the tip of a cilium (also called flagellum) toward the cell body, mediated by motor proteins.","definition_xrefs":["GOC:cilia","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"intraciliary retrograde transport","synonyms":[{"name":"intraflagellar retrograde transport","type":"exact"}],"termid":"GO:0035721"}


id: FYPO:0005526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of organelles or other particles along microtubules is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"decreased microtubule-based movement during vegetative growth","termid":"FYPO:0005462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased transport along microtubule during vegetative growth","synonyms":[{"name":"decreased establishment of localization by movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased microtubule-based transport during vegetative growth","type":"broad"},{"name":"decreased movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005526"}


id: SO:0000678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 3' splice site that does not have the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_three_prime_splice_site","synonyms":[{"name":"non canonical 3' splice site","type":"related"},{"name":"non canonical three prime splice site","type":"exact"},{"name":"non-canonical three prime splice site","type":"exact"}],"termid":"SO:0000678"}


id: GO:0019385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including acetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"methanogenesis, from acetate","secondary_identifiers":["MetaCyc:METH-ACETATE-PWY"],"synonyms":[{"name":"methane biosynthesis from acetate","type":"exact"},{"name":"methane biosynthetic process from acetate","type":"exact"}],"termid":"GO:0019385"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["EC:3.7.1.8","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-13171"],"termid":"GO:0102326"}


id: PBO:0110333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 3","termid":"PBO:0110333"}


id: PBO:0074454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC related modular calcium binding 2","termid":"PBO:0074454"}


id: GO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a parasitic plant is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:16547862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to parasitic plant","termid":"GO:0002241"},{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of parasitic plant","termid":"GO:0002243"}


id: PBO:0042597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 12","termid":"PBO:0042597"}


id: PBO:0091347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name descrption, ANKyrin repeats","termid":"PBO:0091347"}


id: GO:0034425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the etioplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast envelope","termid":"GO:0034425"}


id: GO:0006605
data:
  {"annotated_genes":["SJAG_01951","SJAG_02524","SJAG_04763","SJAG_16459","SJAG_03502","SJAG_02797","SJAG_02208","SJAG_05259","SJAG_01112","SJAG_01282","SJAG_02456","SJAG_01879","SJAG_03250","SJAG_01488","SJAG_03781","SJAG_00326","SJAG_00181","SJAG_02809","SJAG_02320","SJAG_01782","SJAG_02354","SJAG_02034","SJAG_01750","SJAG_02330","SJAG_01641","SJAG_03955","SJAG_01558","SJAG_03358","SJAG_04208","SJAG_03396","SJAG_00687","SJAG_00208","SJAG_00564","SJAG_01560","SJAG_01496","SJAG_01733","SJAG_02917","SJAG_01360","SJAG_02397","SJAG_04014","SJAG_00891","SJAG_04336","SJAG_00108","SJAG_01615","SJAG_03515","SJAG_04996","SJAG_04641","SJAG_05210","SJAG_00196","SJAG_04432","SJAG_02588","SJAG_03976","SJAG_04533","SJAG_03648","SJAG_01442","SJAG_01299","SJAG_03411","SJAG_00603","SJAG_03737","SJAG_02361","SJAG_03684","SJAG_07010","SJAG_03970","SJAG_00360","SJAG_00175","SJAG_00959","SJAG_02355","SJAG_02693","SJAG_01759","SJAG_00404","SJAG_01981","SJAG_01088","SJAG_03560","SJAG_01120","SJAG_03415","SJAG_02077","SJAG_00895","SJAG_01004","SJAG_02867","SJAG_00380","SJAG_01597","SJAG_00204","SJAG_00569","SJAG_01949","SJAG_04552","SJAG_01640","SJAG_02398","SJAG_04218","SJAG_01684","SJAG_04451","SJAG_00064","SJAG_01229","SJAG_01780","SJAG_00373","SJAG_03416","SJAG_03315","SJAG_03385","SJAG_01840","SJAG_04129","SJAG_01281","SJAG_01349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[84163,84277,87178,87733,110508,109372,101813,87600,84241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[84077,91841,105701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[102228,86705,94149,93439,105407,104375,106471],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[94585,105833,84485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[87013,92984,95326,101245,99366,103577,105946,103637,95621,85663,112835,113285,84486,111287,95511,107864,98772,102235,90617,103660,96396],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[103638,99007,95512,84805,112326,109263,86517,88885,103361,103661,103578],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[106115,107858,94675,106465,94329,86497,87023,106475,103639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[88405,105261,109256,98289,104145,101646],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[83801,94687,94462,94514,100554,108621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[92000,106218,59863,99193,93132,103367,104345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[94495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"},{"annotations":[86548,86556,91531,93057,99176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"},{"annotations":[100147,85047,97200,86307,102805,100127,98213,93498,88218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[90379,86945,105702,111987,112700,105824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[111186,87726,110428],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[105409,94151,111988,98660,102230,104377],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":101,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00108":null,"SJAG_00175":null,"SJAG_00181":null,"SJAG_00196":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00326":null,"SJAG_00360":null,"SJAG_00373":null,"SJAG_00380":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00603":null,"SJAG_00687":null,"SJAG_00891":null,"SJAG_00895":null,"SJAG_00959":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01112":null,"SJAG_01120":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01282":null,"SJAG_01299":null,"SJAG_01349":null,"SJAG_01360":null,"SJAG_01442":null,"SJAG_01488":null,"SJAG_01496":null,"SJAG_01558":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01641":null,"SJAG_01684":null,"SJAG_01733":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01780":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_01981":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02320":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02456":null,"SJAG_02524":null,"SJAG_02588":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02917":null,"SJAG_03250":null,"SJAG_03315":null,"SJAG_03358":null,"SJAG_03385":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03648":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03781":null,"SJAG_03955":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04014":null,"SJAG_04129":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04451":null,"SJAG_04533":null,"SJAG_04552":null,"SJAG_04641":null,"SJAG_04763":null,"SJAG_04996":null,"SJAG_05210":null,"SJAG_05259":null,"SJAG_07010":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Protein_targeting"],"synonyms":[{"name":"nascent polypeptide association","type":"related"},{"name":"protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:0006605","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006623":null,"GO:0006625":null,"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0031204":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null,"GO:0045047":null,"GO:0120113":null}}


id: PBO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like (predicted)","termid":"PBO:0004536"}


id: PBO:0111497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated protein Sap18","termid":"PBO:0111497"}


id: PR:O13857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1A6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.03c","synonyms":[{"name":"Spom972h-SPAC1A6.03c","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13857"}


id: GO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of polygalacturonase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"polygalacturonase inhibitor activity","termid":"GO:0090353"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: SO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_escaping","synonyms":[{"name":"splice acceptor variant-NMD escaping","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002328"}


id: GO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition and separates the cytosol from the ciliary plasm.","definition_xrefs":["GOC:kmv","PMID:21422230","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary transition zone","synonyms":[{"name":"cilial transition zone","type":"exact"},{"name":"cilium transition zone","type":"exact"},{"name":"connecting cilium","type":"related"}],"termid":"GO:0035869"}


id: GO:0042093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized thymocyte acquires specialized features of a T-helper cell.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper cell differentiation","synonyms":[{"name":"T-helper cell development","type":"related"},{"name":"helper T cell differentiation","type":"exact"}],"termid":"GO:0042093"}


id: PBO:0067639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 812, pseudogene","termid":"PBO:0067639"}


id: GO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"positively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of Golgi to plasma membrane protein transport","synonyms":[{"name":"activation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane protein transport","type":"exact"}],"termid":"GO:0042998"}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: GO:0140794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 3 L-arginyl = histone 3 L-citrullyl + NH4+, resulting in histone citrullination.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine deiminase activity","termid":"GO:0004668"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810","GO:0140096"],"is_obsolete":false,"name":"histone arginine deiminase activity","synonyms":[{"name":"histone citrullination","type":"related"},{"name":"histone-arginine deiminase activity","type":"exact"}],"termid":"GO:0140794"}


id: PR:Q9P7B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC521.02 gene.","definition_xrefs":["UniProtKB:Q9P7B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent metalloprotease WSS1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.02","synonyms":[{"name":"DNA damage response protein WSS1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC521.02","type":"exact"}],"termid":"PR:Q9P7B5"}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: GO:0033323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate CDP-choline.","definition_xrefs":["MetaCyc:PWY-3561","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via CDP-choline","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism via CDP-choline","type":"exact"},{"name":"choline biosynthesis via CDP-choline","type":"exact"},{"name":"choline formation via CDP-choline","type":"exact"},{"name":"choline synthesis via CDP-choline","type":"exact"}],"termid":"GO:0033323"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: PATO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female","termid":"PATO:0000383"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["PMID:22375062","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 6 subunit","termid":"PBO:0043077"}


id: MOD:02007
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoleyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-palmitoleylated residue","termid":"MOD:02008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoleyl-L-lysine","termid":"MOD:02007"}


id: FYPO:0005822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NEDD8-specific protease activity (deneddylase activity) is decreased under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal NEDD8-specific protease activity","termid":"FYPO:0005821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased NEDD8-specific protease activity","synonyms":[{"name":"decreased deneddylase activity","type":"exact"},{"name":"reduced NEDD8-specific protease activity","type":"exact"}],"termid":"FYPO:0005822"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: PBO:0030075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_valine_import","termid":"PBO:0030075"}


id: GO:0061596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 2,3-dihydroxypropane-1-sulfonate + NAD+ = 3-sulfolactaldehyde + NADH + H+.","definition_xrefs":["GOC:dph","EC:1.1.1.373","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-sulfolactaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-15299","RHEA:40511"],"termid":"GO:0061596"}


id: PBO:0086805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL206W is not an essential protein","termid":"PBO:0086805"}


id: PBO:0070684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 55","termid":"PBO:0070684"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: GO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["UM-BBD_pathwayID:mcr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cresol metabolic process","synonyms":[{"name":"cresol metabolism","type":"exact"},{"name":"hydroxytoluene metabolic process","type":"exact"},{"name":"hydroxytoluene metabolism","type":"exact"}],"termid":"GO:0042212"}


id: PBO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF ubiquitin ligase complex subunit Skp1","termid":"PBO:0003495"}


id: GO:0019683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate catabolic process","synonyms":[{"name":"glyceraldehyde 3-phosphate catabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate breakdown","type":"exact"},{"name":"glyceraldehyde-3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate degradation","type":"exact"}],"termid":"GO:0019683"}


id: PBO:0079826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 1","termid":"PBO:0079826"}


id: GO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heme b + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = biliverdin + CO + Fe2+ + H+ + 3 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:21764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"heme oxygenase (decyclizing) activity","secondary_identifiers":["MetaCyc:HEME-OXYGENASE-DECYCLIZING-RXN","EC:1.14.14.18","Reactome:R-HSA-189398"],"synonyms":[{"name":"ORP33 proteins","type":"related"},{"name":"haem oxidase activity","type":"related"},{"name":"haem oxygenase (decyclizing) activity","type":"exact"},{"name":"haem oxygenase activity","type":"related"},{"name":"heme oxidase activity","type":"related"},{"name":"heme oxygenase activity","type":"related"},{"name":"heme,hydrogen-donor:oxygen oxidoreductase (alpha-methene-oxidizing, hydroxylating)","type":"related"}],"termid":"GO:0004392"}


id: PBO:0084555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme; identical to Pau18p","termid":"PBO:0084555"}


id: PBO:0028270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028270"}


id: GO:0097596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A partial left-handed spiral array of microtubules that lies generally dorsal to the main ventral disc microtubule array in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc supernumerary microtubule array","synonyms":[{"name":"supernumerary microtubule array","type":"broad"},{"name":"ventral disk supernumerary microtubule array","type":"related"}],"termid":"GO:0097596"}


id: PBO:0043202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, M-type","termid":"PBO:0043202"}


id: GO:0015848
data:
  {"annotated_genes":["SJAG_02059","SJAG_02125","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105524,105518,105512,113385,106996,57681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"}]},"cv_name":"biological_process","definition":"The directed movement of spermidine, N-(3-aminopropyl)-1,4-diaminobutane, a polyamine formed by the transfer of a propylamine group from decarboxylated S-adenosylmethionine to putrescine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"spermidine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015848","terms_by_termid":{"GO:1903711":null}}


id: GO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thrombospondin and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:BHF","GOC:vk","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombospondin receptor activity","termid":"GO:0070053"}


id: PBO:0030499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_ionizing_radiation","termid":"PBO:0030499"}


id: PBO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal signal anchor","termid":"PBO:0000505"}


id: GO:0160027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multicellular organismal reproductive process that results in the movement of an egg from within an organism into the external environment.","definition_xrefs":["PMID:18050396","PMID:31164023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg deposition","termid":"GO:0160027"}


id: PR:P87074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor p53-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Crb2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.05","secondary_identifiers":["UniProtKB:P87074"],"synonyms":[{"name":"DNA repair protein rhp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TP53BP1","type":"exact"}],"termid":"PR:P87074"}


id: GO:0050965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of pain in which a temperature stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in sensory perception","termid":"GO:0050961"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception of pain","termid":"GO:0062149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception of pain","synonyms":[{"name":"perception of pain, detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory detection of temperature stimulus","type":"exact"},{"name":"perception of pain, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"sensory perception of pain, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception of pain, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during perception of pain","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception of pain","type":"exact"},{"name":"thermal nociception","type":"related"}],"termid":"GO:0050965"}


id: PBO:0058028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3977","termid":"PBO:0058028"}


id: GO:0045784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium in the ER.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium in ER (obsolete GO:0045784)","synonyms":[{"name":"positive regulation of calcium in ER","type":"exact"}],"termid":"GO:0045784"}


id: GO:1903603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thermospermine.","definition_xrefs":["PMID:24906355","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"thermospermine metabolic process","termid":"GO:1903601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine biosynthetic process","synonyms":[{"name":"thermospermine anabolism","type":"exact"},{"name":"thermospermine biosynthesis","type":"exact"},{"name":"thermospermine formation","type":"exact"},{"name":"thermospermine synthesis","type":"exact"}],"termid":"GO:1903603"}


id: PBO:0034583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex,_with_protein_mislocalized_to_vacuole,_during_vegetative_growth","termid":"PBO:0034583"}


id: PBO:0051658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interphotoreceptor matrix proteoglycan 1","termid":"PBO:0051658"}


id: PBO:0087502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GID Complex that binds directly to central component Vid30p; GID complex is involved in proteasome-dependent catabolite inactivation of fructose-1,6-bisphosphatase; Gid7p contains six WD40 repeats; computational analysis suggests that Gid7p and Moh1p have similar functions","termid":"PBO:0087502"}


id: PBO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds M-box 5'-ACAAT-3'","termid":"PBO:0003920"}


id: GO:0060897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"neural plate pattern specification","termid":"GO:0060896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate regionalization","termid":"GO:0060897"}


id: PBO:0056528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 5 receptor","termid":"PBO:0056528"}


id: FYPO:0005792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G2. Cell length is normal.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0005568","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during G0 to G2 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G2","type":"exact"},{"name":"T-shaped cell during cell quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G2","type":"exact"},{"name":"T-shaped cell during quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G2 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G2","type":"exact"},{"name":"cell morphology, T shaped during G0 to G2 transition","type":"exact"}],"termid":"FYPO:0005792"}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: GO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a virus component and mediating entry of the virus into the cell.","definition_xrefs":["GOC:bf","PMID:7621403","GOC:dph","UniProtKB-KW:KW-1183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exogenous protein binding","termid":"GO:0140272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"virus receptor activity","synonyms":[{"name":"viral receptor activity","type":"exact"}],"termid":"GO:0001618"}


id: _global:starts_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","secondary_identifiers":["RO:0002091"],"termid":"_global:starts_during"}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: GO:0008591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"regulation of frizzled-2 signalling pathway","type":"exact"}],"termid":"GO:0008591"}


id: PBO:0045176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A4","termid":"PBO:0045176"}


id: GO:1990629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found as a homopentamer of the phospholamban (PLN) protein in the sarcoplasmic reticulum (SR) membrane of cardiomyocytes. Cardiac PLN is a main determinant of muscle contraction and relaxation, by regulating intracellular calcium levels.","definition_xrefs":["PMID:16043693","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"phospholamban complex","synonyms":[{"name":"cardiac PLB complex","type":"related"},{"name":"cardiac PLN complex","type":"related"},{"name":"cardiac phospholamban complex","type":"exact"}],"termid":"GO:1990629"}


id: PBO:0088909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family,  Ssa-like","termid":"PBO:0088909"}


id: PBO:0060118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 19","termid":"PBO:0060118"}


id: GO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cAMP-mediated signaling","synonyms":[{"name":"3',5' cAMP-mediated signaling","type":"exact"},{"name":"3',5' cAMP-mediated signalling","type":"exact"},{"name":"3',5'-cAMP-mediated signaling","type":"exact"},{"name":"3',5'-cAMP-mediated signalling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signaling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signalling","type":"exact"},{"name":"cAMP signaling","type":"exact"},{"name":"cAMP signalling","type":"exact"},{"name":"cAMP-mediated signal transduction","type":"exact"},{"name":"cAMP-mediated signalling","type":"exact"},{"name":"cyclic AMP-mediated signaling","type":"exact"},{"name":"cyclic AMP-mediated signalling","type":"exact"}],"termid":"GO:0019933"}


id: PBO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 32","termid":"PBO:0070661"}


id: GO:1903404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["PMID:8700837","GO_REF:0000058","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal phosphate excretion","termid":"GO:1903402"},{"relation_name":"positively_regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal phosphate excretion","synonyms":[{"name":"activation of renal phosphate excretion","type":"narrow"},{"name":"activation of renal phosphate ion excretion","type":"narrow"},{"name":"positive regulation of renal phosphate ion excretion","type":"exact"},{"name":"up regulation of renal phosphate excretion","type":"exact"},{"name":"up regulation of renal phosphate ion excretion","type":"exact"},{"name":"up-regulation of renal phosphate excretion","type":"exact"},{"name":"up-regulation of renal phosphate ion excretion","type":"exact"},{"name":"upregulation of renal phosphate excretion","type":"exact"},{"name":"upregulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903404"}


id: PBO:0109261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL2 interacting cell ontogeny regulator 1","termid":"PBO:0109261"}


id: PBO:0084098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity; involved in the cell integrity signaling pathway; interacts with Rgl1p; localization of Tus1p to the bed neck is regulated by Rgl1p; multicopy suppressor of tor2 mutation and ypk1 ypk2 double mutation; potential Cdc28p substrate","termid":"PBO:0084098"}


id: PBO:0074121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 6","termid":"PBO:0074121"}


id: PBO:0029664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_topoisomerase_type_I_activity","termid":"PBO:0029664"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: PBO:0088895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin calcium-activated chloride channel OR Ca(2+)-activated phospholipid scramblase involved in ER-plasma membrane tethering Ist2","termid":"PBO:0088895"}


id: FYPO:0006033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:28481910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic DNA replication","synonyms":[{"name":"normal protein localisation to chromatin during mitotic DNA replication","type":"exact"},{"name":"normal protein localization to chromatin during DNA replication during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0006033"}


id: PR:Q09184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferation-associated protein 2G4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10804:SF11","OMA:SCHPO00642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.09","secondary_identifiers":["UniProtKB:Q09184"],"synonyms":[{"name":"42 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PA2G4","type":"exact"}],"termid":"PR:Q09184"}


id: PBO:0080974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 9","termid":"PBO:0080974"}


id: GO:1901658
data:
  {"annotated_genes":["SJAG_04927","SJAG_02959","SJAG_03771","SJAG_02580","SJAG_01673","SJAG_00957","SJAG_01359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83735,83736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[104443,85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[86776,87184,108237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[86777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosyl compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_03771":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound breakdown","type":"exact"},{"name":"glycosyl compound catabolism","type":"exact"},{"name":"glycosyl compound degradation","type":"exact"}],"termid":"GO:1901658","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0009972":null,"GO:0046135":null}}


id: PBO:0052322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1328","termid":"PBO:0052322"}


id: PBO:0065309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 29, pseudogene","termid":"PBO:0065309"}


id: PR:P0CT81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L41-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.13c","synonyms":[{"name":"Spom972h-rpl4101","type":"exact"}],"termid":"PR:P0CT81"}


id: GO:0006693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostaglandin metabolic process","synonyms":[{"name":"prostaglandin metabolism","type":"exact"}],"termid":"GO:0006693"}


id: PBO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 4","termid":"PBO:0071141"}


id: GO:0043991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an phosphate group to a serine residue at position 14 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-S14 phosphorylation (obsolete GO:0043991)","synonyms":[{"name":"histone H2B phosphorylation at S14","type":"exact"},{"name":"histone H2BS14 phosphorylation","type":"exact"}],"termid":"GO:0043991"}


id: GO:0050313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-sulfanylglutathione + O2 + H2O = sulfite + glutathione + 2 H+.","definition_xrefs":["EC:1.13.11.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfur dioxygenase activity","secondary_identifiers":["RHEA:12981","MetaCyc:RXN-13161","Reactome:R-HSA-1614605"],"synonyms":[{"name":"S-sulfanylglutathione:oxygen oxidoreductase activity","type":"related"},{"name":"sulfur oxygenase activity","type":"related"},{"name":"sulfur:oxygen oxidoreductase activity","type":"related"},{"name":"sulphur dioxygenase activity","type":"exact"}],"termid":"GO:0050313"}


id: GO:1903512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytanic acid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:dph","PMID:16799769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"phytanic acid metabolic process","synonyms":[{"name":"phytanic acid metabolism","type":"exact"}],"termid":"GO:1903512"}


id: PBO:0038374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_exposure_to","termid":"PBO:0038374"}


id: FYPO:0006272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins earlier than normal at origins that normally fire late.","definition_xrefs":["PMID:26804021","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic DNA replication initiation","termid":"FYPO:0003498"},{"relation_name":"output_of","term_name":"abnormal regulation of mitotic DNA replication initiation from late origin","termid":"FYPO:0005758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"premature mitotic DNA replication initiation from late origin","synonyms":[{"name":"advanced mitotic DNA replication initiation from late origin","type":"exact"},{"name":"premature DNA replication initiation from late origin during mitotic cell cycle","type":"exact"},{"name":"premature DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"premature mitotic DNA replication initiation at late origin","type":"exact"},{"name":"premature mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0006272"}


id: GO:0110046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A signal transduction process that contributes to cell cycle switching, mitotic to meiotic cell cycle.","definition_xrefs":["GOC:al","PMID:17674143"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle (obsolete GO:0110046)","termid":"GO:0110046"}


id: PBO:0055443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2874","termid":"PBO:0055443"}


id: GO:0005298
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: proline(out) + Na+(out) = proline(in) + Na+(in).","definition_xrefs":["TC:2.A.22.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"proline:sodium symporter activity","secondary_identifiers":["RHEA:28967","MetaCyc:TRANS-RXN-118","Reactome:R-HSA-444100"],"synonyms":[{"name":"sodium/proline symporter activity","type":"exact"}],"termid":"GO:0005298"}


id: PATO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000170 yield (obsolete PATO:0000170)","termid":"PATO:0000170"}


id: MOD:01231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(13)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:11999733","PubMed:11857757","PubMed:12442261","PubMed:12175151","Unimod:59#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3x(13)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent heavy form (+3amu), N-term & K","type":"related"},{"name":"Propionyl:13C(3)","type":"related"}],"termid":"MOD:01231"}


id: PBO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Nrf1","termid":"PBO:0003716"}


id: PBO:0000670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family (predicted)","termid":"PBO:0000670"}


id: GO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a low-density lipoprotein particle and delivering the low-density lipoprotein particle into the cell via endocytosis.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"low-density lipoprotein particle receptor activity","secondary_identifiers":["Wikipedia:LDL_receptor","GO:0008032","Reactome:R-HSA-2404131","Reactome:R-HSA-2424254"],"synonyms":[{"name":"LDL receptor","type":"exact"},{"name":"LDLR activity","type":"exact"},{"name":"low-density lipoprotein receptor activity","type":"related"}],"termid":"GO:0005041"}


id: GO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"malonate catabolic process","termid":"GO:0090410"}


id: GO:0050560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Asx) + L-aspartate + ATP = aspartyl-tRNA(Asx) + diphosphate + AMP.","definition_xrefs":["EC:6.1.1.23","MetaCyc:6.1.1.23-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0003674","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"aspartate-tRNA(Asn) ligase activity","secondary_identifiers":["RHEA:18349"],"synonyms":[{"name":"L-aspartate:tRNAAsx ligase (AMP-forming)","type":"related"},{"name":"aspartate-tRNAAsn ligase activity","type":"exact"},{"name":"nondiscriminating aspartyl-tRNA synthetase activity","type":"related"}],"termid":"GO:0050560"}


id: GO:0010591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"is_a","term_name":"regulation of lamellipodium organization","termid":"GO:1902743"},{"relation_name":"regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of lamellipodium assembly","synonyms":[{"name":"regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010591"}


id: PBO:0070125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 39 pseudogene","termid":"PBO:0070125"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: PBO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 73","termid":"PBO:0052806"}


id: PBO:0028034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_microtubule_array_organization","termid":"PBO:0028034"}


id: GO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 ferricytochrome c + nitrous oxide = 2 H+ + 2 ferrocytochrome c + 2 nitric oxide.","definition_xrefs":["EC:1.7.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitric oxide reductase activity","secondary_identifiers":["GO:0016968","RHEA:30211","GO:0016967","KEGG_REACTION:R00294","MetaCyc:NITRIC-OXIDE-REDUCTASE-RXN"],"synonyms":[{"name":"CYP55","type":"narrow"},{"name":"P450 nitric oxide reductase activity","type":"narrow"},{"name":"P450nor","type":"narrow"},{"name":"cytochrome bc nitric oxide reductase activity","type":"narrow"},{"name":"nitric-oxide reductase activity","type":"related"},{"name":"nitrogen oxide reductase activity","type":"related"},{"name":"nitrous-oxide:(acceptor) oxidoreductase (NO-forming)","type":"related"},{"name":"nitrous-oxide:acceptor oxidoreductase (NO-forming)","type":"related"}],"termid":"GO:0016966"}


id: GO:0007595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of milk from the mammary glands and the period of time that a mother lactates to feed her young.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lactation","secondary_identifiers":["Wikipedia:Lactation"],"synonyms":[{"name":"milk secretion","type":"exact"}],"termid":"GO:0007595"}


id: PBO:0030764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_copper_ion","termid":"PBO:0030764"}


id: FYPO:0002022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of actin cortical patches are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actin cortical patch morphology","synonyms":[{"name":"normal F-actin patch morphology","type":"exact"},{"name":"normal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"normal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"normal actin patch morphology","type":"exact"}],"termid":"FYPO:0002022"}


id: GO:0042490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system.","definition_xrefs":["CL:0000199","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation","termid":"GO:0042490"}


id: PATO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000486 moderate response (obsolete PATO:0000486)","termid":"PATO:0000486"}


id: PBO:0072121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 10","termid":"PBO:0072121"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["Wikipedia:Bleb_(cell_biology)","PMID:16624291","GOC:mtg_apoptosis","PMID:12083798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: PBO:0049056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 61","termid":"PBO:0049056"}


id: PR:000028934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/Red+","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-tpx1/Red+","type":"exact"},{"name":"tpx1/Red+","type":"exact"}],"termid":"PR:000028934"}


id: GO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"taste bud development","termid":"GO:0061193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud morphogenesis","termid":"GO:0061194"}


id: PBO:0064414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8A","termid":"PBO:0064414"}


id: PBO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1","termid":"PBO:0047484"}


id: PBO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MRRF","termid":"PBO:0003478"}


id: PBO:0084276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein involved in GPI anchor synthesis; putative alpha 1,2 mannosyltransferase required for addition of the third mannose onto the glycosylphosphatidylinositol (GPI) core structure; human PIG-Bp is a functional homolog","termid":"PBO:0084276"}


id: GO:0004053
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93450,109273],"is_not":false,"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea.","definition_xrefs":["EC:3.5.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"arginase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:20569","Reactome:R-HSA-70569","Reactome:R-HSA-452036","MetaCyc:ARGINASE-RXN"],"synonyms":[{"name":"L-arginase activity","type":"related"},{"name":"L-arginine amidinohydrolase activity","type":"related"},{"name":"arginine amidinase activity","type":"related"},{"name":"arginine transamidinase activity","type":"related"},{"name":"canavanase activity","type":"related"}],"termid":"GO:0004053","terms_by_termid":{"GO:0004053":null}}


id: PBO:0073669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRT1 regulating lncRNA tumor promoter","termid":"PBO:0073669"}


id: PBO:0052712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 4","termid":"PBO:0052712"}


id: PBO:0065254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20G","termid":"PBO:0065254"}


id: RO:HOM0000000
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between biological objects that resemble or are related to each other sufficiently to warrant a comparison.","definition_xrefs":["BGEE:curator"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_similarity_relationship_with","synonyms":[{"name":"correspondence","type":"related"},{"name":"resemblance","type":"related"},{"name":"sameness","type":"exact"},{"name":"similar to","type":"exact"}],"termid":"RO:HOM0000000"}


id: PBO:0050377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 1","termid":"PBO:0050377"}


id: PBO:0039746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein M","termid":"PBO:0039746"}


id: GO:2001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arabinoxylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan binding","termid":"GO:2001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"arabinoxylan binding","termid":"GO:2001068"}


id: PBO:0085651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in microtubule-related processes; GFP-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS; YLR412W is not an essential gene; similar to Arabidopsis SRR1 gene","termid":"PBO:0085651"}


id: GO:0095500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an acetylcholine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"},{"relation_name":"part_of","term_name":"cellular response to acetylcholine","termid":"GO:1905145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"acetylcholine receptor signaling pathway","synonyms":[{"name":"acetylcholine receptor signalling pathway","type":"exact"}],"termid":"GO:0095500"}


id: PBO:0049408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 1 soluble subunit alpha 1","termid":"PBO:0049408"}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: PBO:0062051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily V member 1","termid":"PBO:0062051"}


id: GO:0102508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3,7-di-O-beta-D-glucoside betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["EC:3.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"cyanidin 3,7-diglucoside glucosidase activity","secondary_identifiers":["MetaCyc:RXN-14435"],"termid":"GO:0102508"}


id: PBO:0081543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 460","termid":"PBO:0081543"}


id: GO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a medium-chain fatty acid. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"medium-chain fatty acid metabolic process","termid":"GO:0051791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"medium-chain fatty acid catabolic process","synonyms":[{"name":"medium chain fatty acid catabolic process","type":"exact"},{"name":"medium chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid breakdown","type":"exact"},{"name":"medium-chain fatty acid catabolism","type":"exact"},{"name":"medium-chain fatty acid degradation","type":"exact"}],"termid":"GO:0051793"}


id: GO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process observed in bacteria and filamentous fungi and leading to spontaneous death by lysis. Examples are lysis of the mother cell during sporulation of Bacillus subtilis and self-degradation of fungal cells in Aspergillus nidulans. Autolysis is also involved in bacterial biofilm formation.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","PMID:10974124","PMID:26811896","GOC:jh2","PMID:19286987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autolysis","secondary_identifiers":["Wikipedia:Autolysis"],"termid":"GO:0001896"}


id: GO:0033893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of poly(A) to fragments terminated by 3'-hydroxy and 5'-phosphate groups.","definition_xrefs":["EC:3.1.26.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"ribonuclease IV activity","secondary_identifiers":["MetaCyc:3.1.26.6-RXN"],"synonyms":[{"name":"endoribonuclease IV activity","type":"related"}],"termid":"GO:0033893"}


id: FYPO:0003564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is abnormal.","definition_xrefs":["PomBase:mah","GO:0042138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}


id: PBO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2 (predicted)","termid":"PBO:0003565"}


id: PBO:0041705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2","termid":"PBO:0041705"}


id: PBO:0077182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 6","termid":"PBO:0077182"}


id: PATO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's sensitivity towards a fixed location or value where a change is observed; upper limit.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threshold","termid":"PATO:0000152"}


id: GO:0046892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dehydration of peptidyl-S-carbamoyl-L-cysteine to form peptidyl-S-cyano-L-cysteine.","definition_xrefs":["RESID:AA0333","PMID:12586941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-carbamoyl-L-cysteine dehydration","synonyms":[{"name":"formation of peptidyl-S-cyanocysteine","type":"exact"},{"name":"formation of peptidyl-serine thiocyanate ester","type":"exact"}],"termid":"GO:0046892"}


id: PBO:0058570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-2","termid":"PBO:0058570"}


id: PBO:0038740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin maturation protease","termid":"PBO:0038740"}


id: PBO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter Mmt1 (predicted)","termid":"PBO:0018137"}


id: GO:0048897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of compact myelin sheaths around the axons of a lateral line nerve.","definition_xrefs":["PMID:12112375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination of lateral line nerve axons","termid":"GO:0048897"}


id: FYPO:0001248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001248"}


id: PBO:0069107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 355, pseudogene","termid":"PBO:0069107"}


id: PBO:0060226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MXRA7 pseudogene 1","termid":"PBO:0060226"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: GO:0019210
data:
  {"annotated_genes":["SJAG_01821","SJAG_03931","SJAG_01245","SJAG_01118","SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[103080,111375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[104474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01118":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01821":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0004857","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019210","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: GO:0018495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 2-ketocyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity","termid":"GO:0018495"}


id: PBO:0044527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 1","termid":"PBO:0044527"}


id: GO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"negatively_regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte anergy","synonyms":[{"name":"down regulation of lymphocyte anergy","type":"exact"},{"name":"down-regulation of lymphocyte anergy","type":"exact"},{"name":"downregulation of lymphocyte anergy","type":"exact"},{"name":"inhibition of lymphocyte anergy","type":"narrow"}],"termid":"GO:0002912"}


id: PBO:0055236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2663","termid":"PBO:0055236"}


id: PBO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading/unloading factor (WAPL) Wpl1","termid":"PBO:0034751"}


id: PBO:0041750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA2 antisense RNA 1","termid":"PBO:0041750"}


id: FYPO:0002831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitosis","synonyms":[{"name":"delayed onset of protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic M phase","type":"related"},{"name":"delayed onset of protein phosphorylation during mitotic M-phase","type":"related"},{"name":"delayed onset of protein/peptide phosphorylation during mitosis","type":"exact"},{"name":"delayed protein phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002831"}


id: GO:0098712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-glutamate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-glutamate import across plasma membrane","secondary_identifiers":["GO:1903802","GO:1990123"],"synonyms":[{"name":"L-glutamate import into cell","type":"exact"},{"name":"L-glutamate(1-) import across plasma membrane","type":"broad"},{"name":"L-glutamate(1-) import into cell","type":"exact"}],"termid":"GO:0098712"}


id: PBO:0063773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 5A","termid":"PBO:0063773"}


id: PR:O59816
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23151:SF9","OMA:SCHPO04244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.07","secondary_identifiers":["UniProtKB:O59816"],"synonyms":[{"name":"PDC-E2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PDCE2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLAT","type":"exact"},{"name":"dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pyruvate dehydrogenase complex component E2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59816"}


id: SO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which, when transcribed, can be translated into a protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding","synonyms":[{"name":"protein-coding","type":"exact"}],"termid":"SO:0000010"}


id: PBO:0026817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_nitrogen_starvation","termid":"PBO:0026817"}


id: GO:0141087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"positively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"positive regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141087"}


id: GO:2000262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"is_a","term_name":"positive regulation of protein activation cascade","termid":"GO:2000259"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"},{"relation_name":"positively_regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation, common pathway","termid":"GO:2000262"}


id: PBO:0061925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily H member 1 pseudogene","termid":"PBO:0061925"}


id: PBO:0030455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homocitrate_synthase_activity","termid":"PBO:0030455"}


id: PBO:0074424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 23","termid":"PBO:0074424"}


id: GO:0097572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.","definition_xrefs":["ISBN:0-444-81258-X","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"right nucleus","termid":"GO:0097572"}


id: PBO:0060341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIA","termid":"PBO:0060341"}


id: GO:1905759
data:
  {"annotated_genes":["SJAG_03073","SJAG_02695","SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93073,97502],"is_not":false,"summary":null,"term":"GO:1905759"},{"annotations":[87485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a post-anaphase microtubule array.","definition_xrefs":["PMID:11007487","GO_REF:0000064","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"post-anaphase microtubule array","termid":"GO:1990295"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"post-anaphase array microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule of PAA","type":"exact"},{"name":"microtubule of post-anaphase array","type":"exact"},{"name":"microtubule of post-anaphase microtubule array","type":"exact"},{"name":"microtubuli of PAA","type":"exact"},{"name":"microtubuli of post-anaphase array","type":"exact"},{"name":"microtubuli of post-anaphase microtubule array","type":"exact"},{"name":"microtubulus of PAA","type":"exact"},{"name":"microtubulus of post-anaphase array","type":"exact"},{"name":"microtubulus of post-anaphase microtubule array","type":"exact"},{"name":"neurotubule of PAA","type":"narrow"},{"name":"neurotubule of post-anaphase array","type":"narrow"},{"name":"neurotubule of post-anaphase microtubule array","type":"narrow"}],"termid":"GO:1905759","terms_by_termid":{"GO:1905759":null,"GO:1905760":null}}


id: PBO:0067180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 238, pseudogene","termid":"PBO:0067180"}


id: PBO:0090877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28","termid":"PBO:0090877"}


id: PBO:0085167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated covalently-bound cell wall protein; required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway; coding sequence contains length polymorphisms in different strains; PIR3 has a paralog, HSP150, that arose from the whole genome duplication","termid":"PBO:0085167"}


id: PBO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit alpha 2","termid":"PBO:0039658"}


id: PBO:0058381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4753","termid":"PBO:0058381"}


id: PBO:0066716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 13","termid":"PBO:0066716"}


id: PBO:0091616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Isp5","termid":"PBO:0091616"}


id: GO:0102135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH + O2 = (22R,23R)-22,23-dihydroxy-campest-4-en-3-one + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(22S)-22-hydroxy-campest-4-en-3-one C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11530"],"termid":"GO:0102135"}


id: GO:0072053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal inner medulla over time, from its formation to the mature structure. The renal inner medulla is unique to mammalian kidneys and is the innermost region of the mammalian kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal inner medulla development","synonyms":[{"name":"inner renal medulla development","type":"exact"}],"termid":"GO:0072053"}


id: PATO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001048 relative resistance (obsolete PATO:0001048)","termid":"PATO:0001048"}


id: PBO:0078174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-5","termid":"PBO:0078174"}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016740","GO:0019787","GO:0016746"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8951764","Reactome:R-HSA-8956025","Reactome:R-HSA-8951648","GO:0019945","Reactome:R-HSA-8952044","Reactome:R-HSA-8951661","GO:0016976","GO:0042295","Reactome:R-HSA-8952631","Reactome:R-HSA-8952638","Reactome:R-HSA-8952626","Reactome:R-HSA-8952618"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: PBO:0049195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 1","termid":"PBO:0049195"}


id: PBO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft1 (predicted)","termid":"PBO:0013443"}


id: GO:0018667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexanone + NADPH + H+ + O2 = 6-hexanolide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cyclohexanone monooxygenase activity","secondary_identifiers":["RHEA:24068","MetaCyc:CYCLOHEXANONE-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0166"],"synonyms":[{"name":"cyclohexanone 1,2-monooxygenase activity","type":"exact"},{"name":"cyclohexanone oxygenase activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (6-hydroxylating, 1,2-lactonizing) activity","type":"related"},{"name":"cyclohexanone:NADPH:oxygen oxidoreductase (lactone-forming)","type":"related"}],"termid":"GO:0018667"}


id: PBO:0028163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP_binding","termid":"PBO:0028163"}


id: FYPO:0000715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to K-252a. Cells stop growing (and may die) at a concentration of K-252a that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to K-252a","synonyms":[{"name":"hypersensitive to K-252a","type":"exact"},{"name":"sensitive to K-252a during mitotic cell cycle","type":"related"},{"name":"sensitive to K-252a during vegetative growth","type":"exact"}],"termid":"FYPO:0000715"}


id: GO:0033119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"negatively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of RNA splicing","termid":"GO:0033119"}


id: PBO:0090800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex cyclin Mcs2","termid":"PBO:0090800"}


id: GO:0060452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"positively_regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle contraction","termid":"GO:0060452"}


id: FYPO:0003286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000293","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation","synonyms":[{"name":"decreased chromosome condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation","type":"exact"}],"termid":"FYPO:0003286"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: PBO:0031744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intracellular_transport","termid":"PBO:0031744"}


id: PBO:0039757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerotic plaque pathogenesis associated transcript","termid":"PBO:0039757"}


id: PBO:0082066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase; catalyzes the last of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants are sterol auxotrophs; mutation is functionally complemented by human HSD17B7","termid":"PBO:0082066"}


id: PBO:0071728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 26","termid":"PBO:0071728"}


id: PBO:0017805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-HIT family C/D snoRNP assembly protein Hit1 (predicted)","termid":"PBO:0017805"}


id: PBO:0058737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6862-1","termid":"PBO:0058737"}


id: GO:0015325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA(out) + CoA(in) = acetyl-CoA(in) + CoA(out).","definition_xrefs":["TC:2.A.1.25.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA transmembrane transporter activity","termid":"GO:0008521"},{"relation_name":"is_a","term_name":"coenzyme A transmembrane transporter activity","termid":"GO:0015228"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetyl-CoA:CoA antiporter activity","termid":"GO:0015325"}


id: GO:0075291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sporangiospore formation","termid":"GO:0075287"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"positively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aplanospore formation","termid":"GO:0075291"}


id: GO:1990753
data:
  {"annotated_genes":["SJAG_04498","SJAG_01143","SJAG_03703","SJAG_01665","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89454,115411,115413,115418,115420,115427],"is_not":false,"summary":null,"term":"GO:1990753"}]},"cv_name":"cellular_component","definition":"The region of the cell cortex in a mitotically dividing cell that flanks the central spindle and corresponds to the site of actomyosin ring formation that results in cleavage furrow formation and ingression.","definition_xrefs":["GOC:kmv","PMID:16352658","PMID:23750214","PMID:22552143","PMID:25898168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"equatorial cell cortex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null},"termid":"GO:1990753","terms_by_termid":{"GO:0000085":null,"GO:0051325":null,"GO:0051329":null,"GO:1990753":null}}


id: GO:0016560
data:
  {"annotated_genes":["SJAG_02693","SJAG_00702","SJAG_00891"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93056,99175,107916],"is_not":false,"summary":null,"term":"GO:0016560"}]},"cv_name":"biological_process","definition":"The process in which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the peroxisomal membrane.","definition_xrefs":["PMID:11988772","PMID:11687502","PMID:14754507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007031"},{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179","GO:0007031"],"is_obsolete":false,"name":"protein import into peroxisome matrix, docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome matrix protein import, docking","type":"exact"},{"name":"peroxisome receptor docking","type":"related"},{"name":"protein docking during peroxisome matrix protein import","type":"exact"},{"name":"protein docking during protein import into peroxisome matrix","type":"exact"},{"name":"protein docking during protein transport into peroxisome matrix","type":"exact"},{"name":"protein transport into peroxisome matrix, docking","type":"exact"}],"termid":"GO:0016560","terms_by_termid":{"GO:0016560":null}}


id: PBO:0055979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 2","termid":"PBO:0055979"}


id: FYPO:0006833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis  begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of primary cell septum biogenesis","synonyms":[{"name":"normal onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"normal onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"normal onset of primary cell septum formation","type":"exact"},{"name":"normal onset of primary septum biogenesis","type":"exact"},{"name":"normal onset of primary septum synthesis","type":"related"},{"name":"normal timing of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006833"}


id: PR:Q9P7X7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-like protein 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.08","secondary_identifiers":["UniProtKB:Q9P7X7"],"synonyms":[{"name":"Spom972h-ACTL6A","type":"exact"},{"name":"actin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"actin-like protein arp4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"altered polarity protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X7"}


id: GO:0071852
data:
  {"annotated_genes":["SJAG_03587","SJAG_04184","SJAG_01453","SJAG_01290","SJAG_02192","SJAG_02718","SJAG_01888","SJAG_04878","SJAG_05272","SJAG_01774","SJAG_00310","SJAG_00974","SJAG_02727","SJAG_00667","SJAG_01171","SJAG_01963","SJAG_00340","SJAG_05285","SJAG_02649","SJAG_04668","SJAG_04851","SJAG_01862","SJAG_00620","SJAG_02468","SJAG_01321","SJAG_05001","SJAG_03646","SJAG_00661","SJAG_04327","SJAG_01835","SJAG_02446","SJAG_01646","SJAG_03123","SJAG_03483","SJAG_00163","SJAG_02684","SJAG_01017","SJAG_01028","SJAG_02590","SJAG_03723","SJAG_02278","SJAG_00876","SJAG_00771","SJAG_02222","SJAG_04850","SJAG_04462","SJAG_03705","SJAG_04238","SJAG_03057","SJAG_04620","SJAG_01227","SJAG_03753","SJAG_04868","SJAG_00610","SJAG_01029","SJAG_03631","SJAG_01426","SJAG_04864","SJAG_04236","SJAG_04728","SJAG_04771","SJAG_03013","SJAG_00978","SJAG_04483","SJAG_03444","SJAG_04789","SJAG_04073","SJAG_03295","SJAG_00424","SJAG_00485","SJAG_01288","SJAG_00096","SJAG_02435","SJAG_02916","SJAG_00218","SJAG_04666","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83600,85859,88363,90937,91317,113496,86718],"is_not":false,"summary":null,"term":"GO:0071852"},{"annotations":[90563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84364,86374,110145,113809,87866],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113810,100251,113819,105142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[84852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[87867,97588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034232"},{"annotations":[110442,113820,105143,85279,100252],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[103847,111875,87682,84223,102162,105373,109230,87692],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[104680,98719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[91203,98025,104138,98024],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[112606,83667,89426,98923,98333,87693,113812,88503,114017,113932,96696,114354,98323,90156,98332,100079,114790,102163,91351,110443,98537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009272"},{"annotations":[84683,98866,84344],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034221"},{"annotations":[98026,107378,104139,84434,90124,96224,85231,98027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[103848,87683,87946,86719,98538,86052,104459,94750,84224,84435,109426,105374,83599,90316,91204,93241,85466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031505"},{"annotations":[102164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051278"},{"annotations":[102755,84841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071966"},{"annotations":[83669,88519],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[85569,91037,88525,98929],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[96258,88803,88526],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"},{"annotations":[107046,83745,101404],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization or 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cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall organisation or biogenesis","type":"exact"},{"name":"fungal-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0071852","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0031505":null,"GO:0032995":null,"GO:0034217":null,"GO:0034221":null,"GO:0034232":null,"GO:0034412":null,"GO:0034413":null,"GO:0051278":null,"GO:0060237":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071852":null,"GO:0071966":null,"GO:0071970":null,"GO:0140748":null,"GO:1904541":null}}


id: PBO:0069279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 535, pseudogene","termid":"PBO:0069279"}


id: PBO:0064815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 6","termid":"PBO:0064815"}


id: PBO:0091796
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2709414_2709414insC","termid":"PBO:0091796"}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: PBO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 8 (pseudogene)","termid":"PBO:0050040"}


id: PBO:0029605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transporter_activity","termid":"PBO:0029605"}


id: MOD:01384
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an aminomalonic acid.","definition_xrefs":["PubMed:6366787","RESID:AA0458","PubMed:1621954","PubMed:5415959","PubMed:7457858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomalonic acid (Ser)","synonyms":[{"name":"2-carboxyglycine","type":"exact"},{"name":"Ama","type":"exact"},{"name":"MOD_RES Aminomalonic acid (Ser)","type":"exact"},{"name":"aminomalonic acid","type":"exact"},{"name":"aminopropanedioic acid","type":"exact"}],"termid":"MOD:01384"}


id: GO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the uptake of a G protein-coupled receptor into an endocytic vesicle.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor internalization","synonyms":[{"name":"G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:0002031"}


id: PBO:0054166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1537","termid":"PBO:0054166"}


id: PBO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF9 antisense RNA 1","termid":"PBO:0052361"}


id: PBO:0058647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6776","termid":"PBO:0058647"}


id: PBO:0041229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf50 antisense RNA 1","termid":"PBO:0041229"}


id: GO:0045778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ossification","termid":"GO:0030278"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ossification","synonyms":[{"name":"activation of ossification","type":"narrow"},{"name":"positive regulation of bone biosynthesis","type":"exact"},{"name":"positive regulation of bone formation","type":"exact"},{"name":"stimulation of ossification","type":"narrow"},{"name":"up regulation of ossification","type":"exact"},{"name":"up-regulation of ossification","type":"exact"},{"name":"upregulation of ossification","type":"exact"}],"termid":"GO:0045778"}


id: GO:0006675
data:
  {"annotated_genes":["SJAG_04913","SJAG_03953","SJAG_04878","SJAG_05311","SJAG_02168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87903,108600],"is_not":false,"summary":null,"term":"GO:0006675"},{"annotations":[86856,91836,91352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannosyl-inositol phosphorylceramide, any lipid with a phosphodiester bridge between an inositol residue and the ceramide group which contains a phosphoryl (-P(O)=) groups and a mannose derivative.","definition_xrefs":["GOC:ai","MetaCyc:MIPC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphoceramide metabolic process","termid":"GO:0006673"},{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02168":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"mannosyl-inositol phosphorylceramide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MIPC metabolic process","type":"exact"},{"name":"MIPC metabolism","type":"exact"},{"name":"mannose inositol phosphoceramide metabolic process","type":"exact"},{"name":"mannose inositol phosphoceramide metabolism","type":"exact"},{"name":"mannose-inositol-P-ceramide (MIPC) metabolic process","type":"exact"},{"name":"mannose-inositol-P-ceramide (MIPC) metabolism","type":"exact"},{"name":"mannosyl-inositol-phosphorylceramide metabolism","type":"exact"}],"termid":"GO:0006675","terms_by_termid":{"GO:0006675":null,"GO:0051999":null}}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: MOD:01455
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115256,115531,115534,115532,115533,115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl or carboxyl hydrogen with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"OPhosRes","type":"exact"}],"termid":"MOD:01455","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: GO:0106247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["PMID:29932902","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"},{"relation_name":"is_a","term_name":"negative regulation of exoribonuclease activity","termid":"GO:1901918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106247"}


id: PBO:0042839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 44","termid":"PBO:0042839"}


id: GO:0010767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a UV damage stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage (obsolete GO:0010767)","termid":"GO:0010767"}


id: PBO:0049679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta","termid":"PBO:0049679"}


id: PBO:0012574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated at low pH","termid":"PBO:0012574"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:PARL","PMID:21785459","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


