# terms

id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0079377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 12","termid":"PBO:0079377"}


id: SO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a micronucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"micronuclear_sequence","termid":"SO:0000084"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_chromosome","synonyms":[{"name":"micronuclear chromosome","type":"exact"}],"termid":"SO:0000825"}


id: PBO:0086700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of chromosome V; regulated by inositol/choline","termid":"PBO:0086700"}


id: PBO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1","termid":"PBO:0041850"}


id: PBO:0108763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-phosphoerythronate phosphatase/2-phosphoglycolate phophatase, involved in detoxification of glycolytic by-products","termid":"PBO:0108763"}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: GO:0035906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["MA:0002571","UBERON:0001514","Wikipedia:Descending_aorta","GOC:bf","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta development","termid":"GO:0035906"}


id: PBO:0112593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane adaptor Erg28 protein","termid":"PBO:0112593"}


id: GO:0010601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of auxin biosynthetic process","termid":"GO:0010600"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of auxin metabolic process","termid":"GO:0090355"},{"relation_name":"positively_regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin biosynthetic process","termid":"GO:0010601"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: MOD:00979
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butyl ester (OtBu) and t-butyl (tBu)","termid":"MOD:00979"}


id: PR:O60066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alkylated DNA repair protein alkB homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR16557:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent dioxygenase abh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.04c","secondary_identifiers":["UniProtKB:O60066"],"synonyms":[{"name":"SPBC13G1.04c","type":"related"},{"name":"Spom972h-ALKBH1","type":"exact"},{"name":"alkylated DNA repair protein alkB homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60066"}


id: GO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mevalonate from one side of a membrane to the other. Mevalonate is the anion of mevalonic acid; its (R)-enantiomer is a strategic intermediate derived from hydroxymethylglutaryl-CoA in the biosynthesis of polyprenyl compounds.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mevalonate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015130"}


id: PR:O74766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC24C6.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.04","synonyms":[{"name":"L-glutamate gamma-semialdehyde dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P5C dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC24C6.04","type":"exact"}],"termid":"PR:O74766"}


id: PBO:0082145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA-binding protein; transports newly synthesized acyl-CoA esters from fatty acid synthetase (Fas1p-Fas2p) to acyl-CoA-consuming processes; subject to starvation-induced, Grh1p-mediated unconventional secretion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082145"}


id: PBO:0045319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain beta","termid":"PBO:0045319"}


id: PR:Q09830
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C4G8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.04","synonyms":[{"name":"Spom972h-SPAC4G8.04","type":"exact"}],"termid":"PR:Q09830"}


id: GO:0006236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates cytidine, cytosine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside salvage","termid":"GO:0043097"},{"relation_name":"is_a","term_name":"cytidine biosynthetic process","termid":"GO:0046088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cytidine salvage","termid":"GO:0006236"}


id: PBO:0039490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A13, pseudogene","termid":"PBO:0039490"}


id: FYPO:0007598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at a site where silencing can normally be triggered by the ectopic tethering of a protein.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin silencing at ectopic tethering site","synonyms":[{"name":"abolished chromatin silencing at ectopic tethering site during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007598"}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: GO:0015494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: aromatic amino acid(out) + H+(out) = aromatic amino acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"aromatic amino acid:proton symporter activity","synonyms":[{"name":"aromatic amino acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015494"}


id: PBO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 1","termid":"PBO:0046244"}


id: GO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17E receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-17E receptor binding","synonyms":[{"name":"IL-17E","type":"narrow"},{"name":"interleukin-17E receptor ligand","type":"narrow"}],"termid":"GO:0030380"}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: PBO:0109025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA2 member of B7 family","termid":"PBO:0109025"}


id: PBO:0070602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 70","termid":"PBO:0070602"}


id: PBO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, UvrD subfamily","termid":"PBO:0002244"}


id: PBO:0049621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 24","termid":"PBO:0049621"}


id: GO:0014041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron maturation, the process leading to the attainment of the full functional capacity of a neuron. This process is independent of morphogenetic change.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron maturation","termid":"GO:0014041"}


id: GO:0019624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into isopropylamine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"atrazine catabolic process to isopropylamine","synonyms":[{"name":"atrazine breakdown to isopropylamine","type":"exact"},{"name":"atrazine degradation to isopropylamine","type":"exact"}],"termid":"GO:0019624"}


id: GO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + H2O + O2 = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-glutamate oxidase activity","secondary_identifiers":["RHEA:10028","KEGG_REACTION:R00279","MetaCyc:D-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"D-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-glutamic acid oxidase activity","type":"related"},{"name":"D-glutamic oxidase activity","type":"related"}],"termid":"GO:0047821"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:bhm","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: PBO:0082630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Cia2p that directs Fe-S cluster incorporation and maturation of a subset of cytosolic and nuclear proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human MMS19","termid":"PBO:0082630"}


id: PBO:0045907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 5","termid":"PBO:0045907"}


id: PBO:0084807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR281C is not an essential gene","termid":"PBO:0084807"}


id: MOD:00983
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asp transamidation with piperidine","termid":"MOD:00983"}


id: PR:000027583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/UnMod","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/UnMod","type":"exact"},{"name":"mei2/UnMod","type":"exact"}],"termid":"PR:000027583"}


id: PBO:0069194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 448, pseudogene","termid":"PBO:0069194"}


id: PBO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 16","termid":"PBO:0072487"}


id: PBO:0069150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 401, pseudogene","termid":"PBO:0069150"}


id: PBO:0058214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4506","termid":"PBO:0058214"}


id: PBO:0082933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic assembly chaperone for ribosomal protein Rps2p; co-translationally associates with the N-terminal extension of Rps2p to facilitate expression, solubility and ribosome assembly; released prior to the nuclear import of Rps2p; required for correct processing of 20S pre-rRNA at site D to generate mature 18S rRNA; essential gene in the S288C background but not in CEN.PK2; homologous to human PDCD2L and PDCD2","termid":"PBO:0082933"}


id: PBO:0090715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer zeta subunit","termid":"PBO:0090715"}


id: GO:0035465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway that is involved in the determination of the lateral plate mesoderm with respect to its left and right halves.","definition_xrefs":["GOC:dgh","PMID:15084459"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0035465)","synonyms":[{"name":"regulation of TGF-beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGF-beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of TGFbeta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"regulation of transforming growth factor beta receptor signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0035465"}


id: GO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}


id: PBO:0078269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 5-1","termid":"PBO:0078269"}


id: GO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanal oxime + S-adenosyl-L-methionine = 2-methylpropanal O-methyloxime + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:10996","EC:2.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"isobutyraldoxime O-methyltransferase activity","secondary_identifiers":["MetaCyc:ISOBUTYRALDOXIME-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R04169"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-methylpropanal-oxime O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:aldoxime O-methyltransferase activity","type":"related"},{"name":"aldoxime O-methyltransferase activity","type":"related"},{"name":"aldoxime methyltransferase activity","type":"related"}],"termid":"GO:0030763"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: GO:0032419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of an lysosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of lysosome membrane (obsolete GO:0032419)","synonyms":[{"name":"extrinsic to lysosomal membrane","type":"exact"},{"name":"extrinsic to lysosome membrane","type":"exact"}],"termid":"GO:0032419"}


id: GO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new inner ear sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration","termid":"GO:0070660"}


id: GO:0009850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin metabolic process","synonyms":[{"name":"auxin metabolism","type":"exact"}],"termid":"GO:0009850"}


id: GO:1901083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving pyrrolizidine alkaloid.","definition_xrefs":["UniPathway:UPA00329","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid metabolic process (obsolete GO:1901083)","synonyms":[{"name":"pyrrolizidine alkaloid metabolism","type":"exact"}],"termid":"GO:1901083"}


id: PBO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.4.1.1","termid":"PBO:0003947"}


id: FYPO:0002637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hygromycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hygromycin B","synonyms":[{"name":"normal cell population growth in presence of hygromycin B","type":"exact"},{"name":"normal cell population growth on hygromycin B","type":"exact"},{"name":"normal vegetative cell population growth on hygromycin B","type":"exact"}],"termid":"FYPO:0002637"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: MOD:00650
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a myristoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-myristoylated residue","synonyms":[{"name":"NMyrRes","type":"exact"}],"termid":"MOD:00650"}


id: GO:1903648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:24719469","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll catabolic process","termid":"GO:0010271"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole catabolic process","termid":"GO:1901406"},{"relation_name":"positively_regulates","term_name":"chlorophyll catabolic process","termid":"GO:0015996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chlorophyll catabolic process","synonyms":[{"name":"positive regulation of chlorophyll catabolism","type":"exact"},{"name":"activation of chlorophyll breakdown","type":"narrow"},{"name":"activation of chlorophyll catabolic process","type":"narrow"},{"name":"activation of chlorophyll catabolism","type":"narrow"},{"name":"activation of chlorophyll degradation","type":"narrow"},{"name":"positive regulation of chlorophyll breakdown","type":"exact"},{"name":"positive regulation of chlorophyll degradation","type":"exact"},{"name":"up regulation of chlorophyll breakdown","type":"exact"},{"name":"up regulation of chlorophyll catabolic process","type":"exact"},{"name":"up regulation of chlorophyll catabolism","type":"exact"},{"name":"up regulation of chlorophyll degradation","type":"exact"},{"name":"up-regulation of chlorophyll breakdown","type":"exact"},{"name":"up-regulation of chlorophyll catabolic process","type":"exact"},{"name":"up-regulation of chlorophyll catabolism","type":"exact"},{"name":"up-regulation of chlorophyll degradation","type":"exact"},{"name":"upregulation of chlorophyll breakdown","type":"exact"},{"name":"upregulation of chlorophyll catabolic process","type":"exact"},{"name":"upregulation of chlorophyll catabolism","type":"exact"},{"name":"upregulation of chlorophyll degradation","type":"exact"}],"termid":"GO:1903648"}


id: GO:0035722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-12 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-12","termid":"GO:0071349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-12-mediated signaling pathway","synonyms":[{"name":"IL-12-mediated signaling pathway","type":"exact"},{"name":"interleukin-12-mediated signalling pathway","type":"exact"}],"termid":"GO:0035722"}


id: PBO:0040798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member b9 pseudogene 1","termid":"PBO:0040798"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: PR:O74475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs4 gene.","definition_xrefs":["UniProtKB:O74475","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.02c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs4","type":"exact"}],"termid":"PR:O74475"}


id: GO:0002413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of tolerance induction which leads to immunological tolerance of a tumor.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction to tumor cell","termid":"GO:0002413"}


id: SO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' most coding exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon","synonyms":[{"name":"5' coding exon","type":"exact"},{"name":"five prime coding exon","type":"exact"}],"termid":"SO:0000200"}


id: GO:0046957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cell or organism away from a source of light.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototaxis","termid":"GO:0042331"},{"relation_name":"is_a","term_name":"negative energy taxis","termid":"GO:0052129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative phototaxis","secondary_identifiers":["GO:0046955"],"synonyms":[{"name":"negative phototactic behavior","type":"exact"},{"name":"negative phototactic behaviour","type":"exact"},{"name":"negative taxis in response to light","type":"exact"}],"termid":"GO:0046957"}


id: PBO:0045927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member B","termid":"PBO:0045927"}


id: PBO:0108507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform-cutting endonuclease Cce1","termid":"PBO:0108507"}


id: FYPO:0007702
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is longer than normal, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable elongated cell with mitotic cell cycle arrest in interphase","termid":"FYPO:0001497"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"classical cdc phenotype","type":"related"},{"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable elongated cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0007702","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0008296
data:
  {"annotated_genes":["SJAG_05373","SJAG_01163","SJAG_02298","SJAG_02908","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101290,105182],"is_not":false,"summary":null,"term":"GO:0008296"},{"annotations":[84702,106024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[84705,103424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0004527","GO:0003674","GO:0016787","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"3'-5'-DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9023943"],"synonyms":[{"name":"3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"3'-5'-exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0008296","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null}}


id: PBO:0084469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKKK acting in the protein kinase C signaling pathway; the kinase C signaling pathway controls cell integrity; upon activation by Pkc1p phosphorylates downstream kinases Mkk1p and Mkk2p; MAPKKK is an acronym for mitogen-activated protein (MAP) kinase kinase kinase","termid":"PBO:0084469"}


id: PBO:0058635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6767","termid":"PBO:0058635"}


id: GO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemopoietic stem cell acquires the specialized features of a B-1 B cell. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation","termid":"GO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell differentiation","synonyms":[{"name":"B-1 B cell development","type":"related"},{"name":"B-1 B lymphocyte differentiation","type":"exact"},{"name":"B-1 B-cell differentiation","type":"exact"},{"name":"B-1 B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0001923"}


id: FYECO:0000362
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formaldehyde was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formaldehyde","termid":"FYECO:0000362"}


id: FYPO:0001096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during nitrogen starvation","synonyms":[{"name":"normal RNA accumulation during nitrogen starvation","type":"related"},{"name":"normal RNA level during nitrogen depletion","type":"exact"},{"name":"normal RNA level during nitrogen deprivation","type":"exact"},{"name":"normal cellular RNA level during nitrogen starvation","type":"exact"},{"name":"normal mRNA level during nitrogen starvation","type":"narrow"},{"name":"normal transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001096"}


id: GO:0034031
data:
  {"annotated_genes":["SJAG_02247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside bisphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate catabolic process","termid":"GO:0033869"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate metabolic process","termid":"GO:0033875"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside bisphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside bisphosphate breakdown","type":"exact"},{"name":"ribonucleoside bisphosphate catabolism","type":"exact"},{"name":"ribonucleoside bisphosphate degradation","type":"exact"}],"termid":"GO:0034031","terms_by_termid":{"GO:0015938":null}}


id: FYPO:0006005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled and/or maintained in a specific location.","definition_xrefs":["GO:1902405","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal actomyosin contractile ring localization","synonyms":[{"name":"normal actomyosin contractile ring localisation","type":"exact"},{"name":"normal actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal actomyosin contractile ring positioning","type":"exact"},{"name":"normal cytokinetic contractile ring localization","type":"exact"},{"name":"normal mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006005"}


id: GO:0102380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = rebaudioside B + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (rebaudioside B forming)","secondary_identifiers":["MetaCyc:RXN-13516"],"termid":"GO:0102380"}


id: PR:Q9UTL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A co-chaperone protein HscB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01931","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J-type co-chaperone jac1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.08","secondary_identifiers":["UniProtKB:Q9UTL6"],"synonyms":[{"name":"J-type accessory chaperone 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hscB","type":"exact"}],"termid":"PR:Q9UTL6"}


id: PBO:0028340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclin-dependent_protein_kinase_activity","termid":"PBO:0028340"}


id: PBO:0056520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mbt domain containing 1","termid":"PBO:0056520"}


id: FYECO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which manumycin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ manumycin A","synonyms":[{"name":"+ manu-A","type":"exact"}],"termid":"FYECO:0000372"}


id: GO:0039606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation initiation in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation initiation","synonyms":[{"name":"suppression by virus of host translation initiation","type":"narrow"}],"termid":"GO:0039606"}


id: GO:0140819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of UDP-beta-L-arabinofuranose from one side of a membrane to the other.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"UDP-beta-L-arabinofuranose transporter activity","termid":"GO:0140819"}


id: FYPO:0002991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature G1/S phase transition during cellular response to hydrogen peroxide during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to H2O2","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002991"}


id: GO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.","definition_xrefs":["EC:3.1.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016788","GO:0016787","GO:0004721"],"is_obsolete":false,"name":"myosin phosphatase activity","secondary_identifiers":["Reactome:R-HSA-445699","Reactome:R-HSA-390593","GO:0017019"],"synonyms":[{"name":"myosin phosphatase myosin binding","type":"related"},{"name":"myosin phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0017018"}


id: PBO:0086873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; one of six StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; localizes to membrane contact sites throughout the cell, including nucleus-vacuole junctions and ER-mitochondrial contact sites","termid":"PBO:0086873"}


id: PBO:0051953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR1 divergent transcript","termid":"PBO:0051953"}


id: FYPO:0003995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000294","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"abnormal DNA primase activity","termid":"FYPO:0003995"}


id: PBO:0043733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 12","termid":"PBO:0043733"}


id: RO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_ubiquitination","termid":"RO:0002482"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_01589","SJAG_00991","SJAG_04673","SJAG_02780","SJAG_01890","SJAG_03652","SJAG_02779","SJAG_05213","SJAG_03334","SJAG_04295","SJAG_01941","SJAG_04325","SJAG_01660","SJAG_01344","SJAG_03497","SJAG_00835","SJAG_02463","SJAG_02962","SJAG_00671","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[70807,88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[109761,115023,62981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[91628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[109203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[92172,93152,114220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[91629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034775"},{"annotations":[97432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[98683,84421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[84565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[99724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[89423],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[63709,68472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901962"},{"annotations":[96425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[64937,106192,112679,61256,64938,63905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[96754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86271,86272,96755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0034775":null,"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1901962":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null}}


id: FYPO:0005930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere outer repeat region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at centromere outer repeat","synonyms":[{"name":"normal chromatin binding at centromere otr","type":"exact"},{"name":"normal chromatin binding at centromere outer repeat region","type":"exact"},{"name":"normal chromatin binding at centromeric outer repeat region","type":"exact"},{"name":"normal chromatin binding at pericentric region","type":"related"},{"name":"normal chromatin binding at pericentromeric region","type":"related"}],"termid":"FYPO:0005930"}


id: PBO:0066559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 22","termid":"PBO:0066559"}


id: PBO:0073805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 11","termid":"PBO:0073805"}


id: GO:0006450
data:
  {"annotated_genes":["SJAG_01248","SJAG_04756","SJAG_01259","SJAG_03545","SJAG_04738","SJAG_00443","SJAG_02015","SJAG_01797","SJAG_04452","SJAG_04285","SJAG_03094","SJAG_02428","SJAG_04700","SJAG_00579","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101154,114639],"is_not":false,"summary":null,"term":"GO:0006450"},{"annotations":[58790,65937,57731,61075,96528,61076,62891,61074,63570,57091,56831,63556,89818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106074"},{"annotations":[105560,110042,91567,106223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_00579":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02428":null,"SJAG_03094":null,"SJAG_03545":null,"SJAG_03677":null,"SJAG_04285":null,"SJAG_04452":null,"SJAG_04700":null,"SJAG_04738":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of translational fidelity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0000029"],"synonyms":[{"name":"regulation of translational accuracy","type":"exact"}],"termid":"GO:0006450","terms_by_termid":{"GO:0006450":null,"GO:0106074":null,"GO:0140018":null}}


id: PBO:0086322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hexose transporter family members; expression is induced in low glucose and repressed in high glucose; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086322"}


id: GO:0033881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxycholoyl-CoA + cholate = deoxycholate + choloyl-CoA.","definition_xrefs":["RHEA:49436","PMID:22021638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bile-acid-CoA transferase activity","secondary_identifiers":["KEGG_REACTION:R07295","EC:2.8.3.25"],"synonyms":[{"name":"bile-acid-CoA hydrolase activity","type":"related"},{"name":"deoxycholoyl-CoA transferase activity","type":"related"}],"termid":"GO:0033881"}


id: PBO:0057494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 612","termid":"PBO:0057494"}


id: PBO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (CTG) 1-1","termid":"PBO:0061170"}


id: GO:0032010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by maturation of an early phagosome following the ingestion of particulate material by phagocytosis; during maturation, phagosomes acquire markers of late endosomes and lysosomes.","definition_xrefs":["PMID:12388753","GOC:mah","PMID:14733906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary lysosome","termid":"GO:0005767"},{"relation_name":"is_a","term_name":"phagocytic vesicle","termid":"GO:0045335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"phagolysosome","secondary_identifiers":["Wikipedia:Phagolysosome"],"synonyms":[{"name":"late phagocytic vesicle","type":"related"},{"name":"late phagosome","type":"related"}],"termid":"GO:0032010"}


id: GO:1903881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:20054338","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903881"}


id: PR:O94692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02903","PANTHER:PTHR11093:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.08","secondary_identifiers":["UniProtKB:O94692"],"synonyms":[{"name":"Spom972h-RUVBL2","type":"exact"}],"termid":"PR:O94692"}


id: PBO:0047656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 8","termid":"PBO:0047656"}


id: PBO:0064400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARN like ribonuclease domain containing exonuclease 1","termid":"PBO:0064400"}


id: GO:0048366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the leaf over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf development","termid":"GO:0048366"}


id: PBO:0087644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the glycosylphosphatidylinositol transamidase complex; involved in the addition of GPIs to newly synthesized proteins; luminally-oriented, type I integral membrane glycoprotein of the ER; human PIG-T homolog","termid":"PBO:0087644"}


id: PBO:0080387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog D","termid":"PBO:0080387"}


id: PBO:0082927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aldehyde dehydrogenase; involved in beta-alanine synthesis; uses NAD+ as the preferred coenzyme; very similar to Ald2p; expression is induced by stress and repressed by glucose","termid":"PBO:0082927"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0054819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2232","termid":"PBO:0054819"}


id: PBO:0108910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein","termid":"PBO:0108910"}


id: PBO:0038384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_connecting_branch","termid":"PBO:0038384"}


id: FYPO:0001578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing a dipeptide such as Leu-Ala as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on dipeptide nitrogen source","synonyms":[{"name":"normal cell population growth on dipeptide nitrogen source","type":"exact"},{"name":"normal dipeptide utilization","type":"related"},{"name":"normal vegetative cell population growth on dipeptide nitrogen source","type":"exact"}],"termid":"FYPO:0001578"}


id: GO:0052757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of hexosaminic linkages in chondroitin, a linear polymer structure composed of the repeating disaccharide unit [->4)-D-glucuronic acid-(1->3)-N-acetyl-D-galactosamine-(1-], also written as [->4GlcUA1->3GalNAc1-].","definition_xrefs":["PMID:18390555","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endogalactosaminidase activity","termid":"GO:0033931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"chondroitin hydrolase activity","synonyms":[{"name":"chondroitin endo-beta-galactosaminidase activity","type":"exact"}],"termid":"GO:0052757"}


id: PBO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 11","termid":"PBO:0047660"}


id: PBO:0088838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1","termid":"PBO:0088838"}


id: PBO:0068408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1","termid":"PBO:0068408"}


id: PBO:0089105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein Mtf2","termid":"PBO:0089105"}


id: PBO:0004733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia","termid":"PBO:0004733"}


id: GO:0043470
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75022,71987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[92674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[85820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[75025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of carbohydrates.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"regulates","term_name":"carbohydrate catabolic process","termid":"GO:0016052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043470","terms_by_termid":{"GO:0043456":null,"GO:0045820":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:0018879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving biphenyl, a toxic aromatic hydrocarbon used as a heat transfer agent, as a fungistat in packaging citrus fruits and in plant disease control. Biphenyl can be chlorinated with 1-10 chlorine molecules to form polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biphenyl metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bph"],"synonyms":[{"name":"biphenyl metabolism","type":"exact"},{"name":"xenene metabolic process","type":"exact"},{"name":"xenene metabolism","type":"exact"}],"termid":"GO:0018879"}


id: PBO:0054686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2094","termid":"PBO:0054686"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: PBO:0079341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 25, pseudogene","termid":"PBO:0079341"}


id: PBO:0091469
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli mutY","termid":"PBO:0091469"}


id: PR:000059631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein spc7 (Schizosaccharomyces pombe) that has been phosphorylated on residues at positions equivalent to Thr-257, Thr-338, Thr-366, Thr-395, Thr-422, Thr-453, Thr-507, Thr-529, and Thr-552 of the amino acid sequence represented by UniProtKB:O59757. Example: UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047.","definition_xrefs":["PomBase:VW","PMID:22521786","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spc7/Phos-MELT","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"PomBase_original_PRO_term_name: kinetochore protein spc7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spc7/Phos-MELT","type":"exact"},{"name":"Spom-spc7/Phos:1","type":"exact"},{"name":"UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047","type":"narrow"}],"termid":"PR:000059631"}


id: GO:1901460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to formic acid","termid":"GO:1901460"}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: PBO:0041517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 61","termid":"PBO:0041517"}


id: PBO:0069373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 633, pseudogene","termid":"PBO:0069373"}


id: PBO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h+_cells","termid":"PBO:0030825"}


id: GO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protein location in vacuole","termid":"GO:0072667"}


id: GO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in changes in chromatin structure contributing to chronological cell aging, occurring in non-dividing cells.","definition_xrefs":["GOC:tb","GOC:jh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in chronological cell aging (obsolete GO:0001305)","synonyms":[{"name":"progressive alteration of chromatin during chronological cell ageing","type":"related"},{"name":"progressive alteration of chromatin during chronological cell aging","type":"related"}],"termid":"GO:0001305"}


id: MOD:00357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0352","PubMed:11902668","PubMed:8611516","Unimod:409#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(8alpha-FMN)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(1-[8alpha riboflavin 5'-dihydrogen phosphate]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(8alpha-FMN)-L-histidine","type":"exact"},{"name":"8alpha-(N(epsilon)-histidyl)FMN","type":"exact"},{"name":"8alpha-(N1'-histidyl)FMN","type":"exact"},{"name":"FMNH","type":"related"},{"name":"MOD_RES Tele-8alpha-FMN histidine","type":"exact"},{"name":"N(tau)-(8alpha-FMN)-histidine","type":"exact"},{"name":"Ntele8aFMNHis","type":"exact"},{"name":"flavin mononucleotide","type":"related"},{"name":"tele-(8alpha-FMN)-histidine","type":"exact"}],"termid":"MOD:00357"}


id: PR:O59698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol-3-phosphate transporter GlpT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02606","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.01c","secondary_identifiers":["UniProtKB:O59698"],"synonyms":[{"name":"Spom972h-glpT","type":"exact"}],"termid":"PR:O59698"}


id: GO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl ethyl ketone + O2 = H2O + ethyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-butanone oxidase activity","termid":"GO:0018486"}


id: PBO:0065679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 1 homolog","termid":"PBO:0065679"}


id: PBO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B7","termid":"PBO:0060773"}


id: PBO:0067987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 289","termid":"PBO:0067987"}


id: PBO:0090587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAP42 family TORC1 signalling protein Tap42","termid":"PBO:0090587"}


id: GO:0035398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of a T cell mediated immune response mediated via cytokine production by a helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"helper T cell enhancement of adaptive immune response","termid":"GO:0035397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of T cell mediated immune response","synonyms":[{"name":"helper T cell enhancement of T cell mediated immunity","type":"exact"},{"name":"provision of T cell help to T cell","type":"exact"}],"termid":"GO:0035398"}


id: PBO:0031225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_cadmium_ion","termid":"PBO:0031225"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: PBO:0017785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor for cytoplasmic methionyl-and glutamyl-tRNA synthetases Asc1 (predicted)","termid":"PBO:0017785"}


id: PBO:0044895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPP autophagy regulator 1","termid":"PBO:0044895"}


id: GO:1905487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"negatively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterior/posterior axon guidance","synonyms":[{"name":"down regulation of anterior-posterior axon guidance","type":"exact"},{"name":"down regulation of anterior/posterior axon guidance","type":"exact"},{"name":"down regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"down-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"down-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"down-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"downregulation of anterior-posterior axon guidance","type":"exact"},{"name":"downregulation of anterior/posterior axon guidance","type":"exact"},{"name":"downregulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"inhibition of anterior-posterior axon guidance","type":"narrow"},{"name":"inhibition of anterior/posterior axon guidance","type":"narrow"},{"name":"inhibition of anterior/posterior axon pathfinding","type":"narrow"},{"name":"negative regulation of anterior-posterior axon guidance","type":"exact"},{"name":"negative regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905487"}


id: GO:0072238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long nephron development","termid":"GO:0072029"},{"relation_name":"is_a","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long nephron development","synonyms":[{"name":"metanephric juxtamedullary nephron development","type":"related"}],"termid":"GO:0072238"}


id: GO:0072426
data:
  {"annotated_genes":["SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98477,90645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072426","terms_by_termid":{"GO:0072435":null}}


id: GO:0075191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the host cells digest parts of their own cytoplasm, occurring when the host is on or near its symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagy of host cells on or near symbiont surface (obsolete GO:0075191)","termid":"GO:0075191"}


id: GO:0046505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sulfolipids, any compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.","definition_xrefs":["PMID:9751667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sulfolipid metabolic process","synonyms":[{"name":"sulfolipid metabolism","type":"exact"},{"name":"sulpholipid metabolic process","type":"exact"},{"name":"sulpholipid metabolism","type":"exact"}],"termid":"GO:0046505"}


id: GO:1902836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline import into cell.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24344203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"positively_regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of proline import across plasma membrane","synonyms":[{"name":"activation of proline import into cell","type":"narrow"},{"name":"positive regulation of proline import into cell","type":"exact"},{"name":"up regulation of proline import into cell","type":"exact"},{"name":"up-regulation of proline import into cell","type":"exact"},{"name":"upregulation of proline import into cell","type":"exact"}],"termid":"GO:1902836"}


id: PBO:0043844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPVL antisense RNA 2","termid":"PBO:0043844"}


id: PATO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"x-shaped","termid":"PATO:0002429"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: PBO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-1-phosphate uridylyltransferase Gal7","termid":"PBO:0004963"}


id: PBO:0003283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein (predicted)","termid":"PBO:0003283"}


id: PBO:0073646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigma non-opioid intracellular receptor 1","termid":"PBO:0073646"}


id: GO:0047913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + UDP-D-glucose = 1-O-galloyl-beta-D-glucose + UDP.","definition_xrefs":["RHEA:15249","EC:2.4.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"gallate 1-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:GALLATE-1-BETA-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03297"],"synonyms":[{"name":"UDP-glucose-vanillate 1-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:gallate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-vanillate 1-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gallate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:gallate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:vanillate 1-O-glucosyltransferase activity","type":"related"},{"name":"gallate 1-b-glucosyltransferase activity","type":"exact"}],"termid":"GO:0047913"}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: PBO:0014571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter (predicted)","termid":"PBO:0014571"}


id: PBO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 7","termid":"PBO:0070318"}


id: MOD:00682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a hydroxylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated arginine","synonyms":[{"name":"HyArg","type":"exact"}],"termid":"MOD:00682"}


id: PBO:0004376
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.39","termid":"PBO:0004376"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: PBO:0050724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 10","termid":"PBO:0050724"}


id: PBO:0076546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1","termid":"PBO:0076546"}


id: SO:1001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001194 alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping (obsolete SO:1001194)","termid":"SO:1001194"}


id: MOD:01417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a monomethylated proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated proline","termid":"MOD:00712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated proline","synonyms":[{"name":"Me1Pro","type":"exact"}],"termid":"MOD:01417"}


id: SO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III to transcribe predominantly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream. ","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_3","synonyms":[{"name":"RNApol III promoter type 3","type":"exact"}],"termid":"SO:0000621"}


id: PBO:0076469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 2 homolog","termid":"PBO:0076469"}


id: GO:0071421
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850","SJAG_04867","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60732,63481,86822,87306,91429,99882,104732],"is_not":false,"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"A process in which a manganese ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transport","termid":"GO:0006828"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"manganese ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"manganese ion membrane transport","type":"exact"},{"name":"transmembrane manganese transport","type":"exact"}],"termid":"GO:0071421","terms_by_termid":{"GO:0071421":null}}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: RO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of determined by","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_influences","termid":"RO:0002566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"determines","termid":"RO:0002508"}


id: PR:O74984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein homolog C338.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.06c","synonyms":[{"name":"Spom972h-SPCC338.06c","type":"exact"}],"termid":"PR:O74984"}


id: PBO:0064478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG alternative reading frame","termid":"PBO:0064478"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: GO:0006977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"},{"relation_name":"is_a","term_name":"mitotic G1 DNA damage checkpoint signaling","termid":"GO:0031571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest","synonyms":[{"name":"positive regulation of cell cycle arrest by p53-mediated DNA damage response","type":"exact"}],"termid":"GO:0006977"}


id: GO:0015720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of allantoin, (2,5-dioxo-4-imidazolidinyl)urea, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"allantoin transport","synonyms":[{"name":"allantoin transmembrane transport","type":"exact"},{"name":"allantoin/allantoate transport","type":"broad"}],"termid":"GO:0015720"}


id: PBO:0079635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 6","termid":"PBO:0079635"}


id: GO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of epothilone, a drug obtained from the myxobacteria Sporangium cellulosum that interferes with cell division. Some epothilones are being studied as treatments for cancer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"epothilone metabolic process","termid":"GO:0050813"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"epothilone biosynthetic process","synonyms":[{"name":"epothilone anabolism","type":"exact"},{"name":"epothilone biosynthesis","type":"exact"},{"name":"epothilone formation","type":"exact"},{"name":"epothilone synthesis","type":"exact"}],"termid":"GO:0050814"}


id: PBO:0003488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E 4F complex subunit","termid":"PBO:0003488"}


id: PBO:0071724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 22","termid":"PBO:0071724"}


id: PBO:0076159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 3","termid":"PBO:0076159"}


id: FYPO:0004853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of an RNA in a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype","termid":"FYPO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"RNA localization phenotype","synonyms":[{"name":"RNA localisation phenotype","type":"exact"},{"name":"fission yeast RNA localization phenotype","type":"exact"}],"termid":"FYPO:0004853"}


id: PBO:0069597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 874, pseudogene","termid":"PBO:0069597"}


id: GO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast development","termid":"GO:0048627"}


id: PBO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains pseudogene 1","termid":"PBO:0052406"}


id: GO:0002835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"regulation of response to tumor cell","termid":"GO:0002834"},{"relation_name":"negatively_regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to tumor cell","synonyms":[{"name":"down regulation of response to tumor cell","type":"exact"},{"name":"down-regulation of response to tumor cell","type":"exact"},{"name":"downregulation of response to tumor cell","type":"exact"},{"name":"inhibition of response to tumor cell","type":"narrow"},{"name":"negative regulation of response to tumour cell","type":"exact"}],"termid":"GO:0002835"}


id: PBO:0081909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 876, pseudogene","termid":"PBO:0081909"}


id: GO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of pericentric heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterochromatin formation","termid":"GO:0031453"},{"relation_name":"is_a","term_name":"regulation of pericentric heterochromatin formation","termid":"GO:0090052"},{"relation_name":"positively_regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of pericentric heterochromatin formation","synonyms":[{"name":"positive regulation of chromatin silencing at centromere","type":"exact"},{"name":"positive regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090053"}


id: PBO:0085042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential hydrolase involved in mRNA decapping; activates Xrn1p; may function in a feedback mechanism to regulate deadenylation, contains pyrophosphatase activity and a HIT (histidine triad) motif; acts as inhibitor of neutral trehalase Nth1p; required for growth on glycerol medium; protein abundance increases in response to DNA replication stress; DCS1 has a paralog, DCS2, that arose from the whole genome duplication","termid":"PBO:0085042"}


id: PBO:0017747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT homolog, cytoplasmic translational regulator Yih1 (predicted)","termid":"PBO:0017747"}


id: GO:1905713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mitochondrial calcium uptake that is involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:26644474","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium ion concentration (obsolete GO:1905713)","synonyms":[{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ion transmembrane import into mitochondrion involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"mitochondrial calcium uptake involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905713"}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: GO:1900214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["PMID:17314325","GOC:mtg_kidney_jan10","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900214"}


id: PBO:0038577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRAXAS1 pseudogene 2","termid":"PBO:0038577"}


id: GO:0035838
data:
  {"annotated_genes":["SJAG_02838","SJAG_02511","SJAG_03637","SJAG_01196","SJAG_03915","SJAG_03011","SJAG_04666","SJAG_02104","SJAG_02278","SJAG_03126","SJAG_05285","SJAG_04358","SJAG_01754","SJAG_03625","SJAG_02222","SJAG_00424","SJAG_04566","SJAG_02320","SJAG_03748","SJAG_04765","SJAG_00514","SJAG_04058","SJAG_00030","SJAG_04509","SJAG_00152","SJAG_01925","SJAG_03119","SJAG_01189","SJAG_02338","SJAG_04624","SJAG_04703","SJAG_04901","SJAG_02169","SJAG_00661","SJAG_03486","SJAG_02916","SJAG_01388","SJAG_01290","SJAG_03705","SJAG_04960","SJAG_02166","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84615,88512,89974,91034,91517,92962,95836,96248,99954,108228,110101,111516,112619,115279,115281,115283,115285,115287,115289],"is_not":false,"summary":null,"term":"GO:0035838"},{"annotations":[111861,112229,108007,114649,109111,112533,84030,113925,93297,86831,114841,90668,86859,102153,85980,110211,88508],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902716"},{"annotations":[92967,111870,108835,95400,85562,87680,110437,106826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035841"},{"annotations":[106828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"},{"annotations":[102160,108837,87681,100711,84901,110438,110105,92968,85564,99146,95401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035840"},{"annotations":[95729],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"The region at either end of the longest axis of a cylindrical or elongated cell, where polarized growth occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_01189":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_01388":null,"SJAG_01754":null,"SJAG_01925":null,"SJAG_02104":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02338":null,"SJAG_02511":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03625":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03915":null,"SJAG_04058":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04566":null,"SJAG_04624":null,"SJAG_04666":null,"SJAG_04703":null,"SJAG_04765":null,"SJAG_04901":null,"SJAG_04960":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growing cell tip","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30726171":null},"synonyms":[{"name":"growing cell end","type":"exact"}],"termid":"GO:0035838","terms_by_termid":{"GO:0035838":null,"GO:0035840":null,"GO:0035841":null,"GO:0035842":null,"GO:1902716":null,"GO:1902929":null}}


id: PBO:0073077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2","termid":"PBO:0073077"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: GO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 3',5'-cyclic AMP + H2O = AMP + H+ and 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:9419816","PMID:8557689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-AMP phosphodiesterase activity","termid":"GO:0004115"},{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-111955"],"synonyms":[{"name":"calmodulin-activated cyclic-nucleotide dual specificity phosphodiesterase activity","type":"related"},{"name":"calmodulin-dependent cyclic-nucleotide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004117"}


id: GO:0010036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a boron-containing substance stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to boron-containing substance","synonyms":[{"name":"response to boron","type":"exact"}],"termid":"GO:0010036"}


id: GO:0042197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms. Halogens include fluorine, chlorine, bromine and iodine.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon metabolic process","synonyms":[{"name":"halogenated hydrocarbon metabolism","type":"exact"}],"termid":"GO:0042197"}


id: GO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"},{"relation_name":"part_of","term_name":"somatodendritic compartment","termid":"GO:0036477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuronal cell body","secondary_identifiers":["Wikipedia:Soma_(biology)","NIF_Subcellular:sao1044911821"],"synonyms":[{"name":"neuron cell body","type":"exact"},{"name":"neuronal cell soma","type":"exact"}],"termid":"GO:0043025"}


id: PBO:0038788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase 2","termid":"PBO:0038788"}


id: PBO:0028637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028637"}


id: MOD:00361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an S-adenosylmethionine and a four-iron four-sulfur cluster to tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide.","definition_xrefs":["PubMed:14704425","PubMed:11222759","RESID:AA0356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","synonyms":[{"name":"METAL Iron-sulfur (4Fe-4S-S-AdoMet)","type":"exact"},{"name":"tetra-mu3-sulfido(S-adenosylmethion-N,O-diyliron)tris(S-cysteinyliron)","type":"exact"},{"name":"tris-L-cysteinyl S-adenosylmethion-N,O-diyl tetrairon tetrasulfide","type":"exact"}],"termid":"MOD:00361"}


id: PBO:0039005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF1 antisense RNA 1","termid":"PBO:0039005"}


id: PATO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along transverse axis.","definition_xrefs":["PATOC:msp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laterally compressed","synonyms":[{"name":"laterally flattened","type":"exact"},{"name":"transversely flattened","type":"related"}],"termid":"PATO:0002054"}


id: PBO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 5","termid":"PBO:0047653"}


id: PBO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP+] Tyr1 (predicted)","termid":"PBO:0005831"}


id: PBO:0062824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sialoglycoprotein endopeptidase like 1","termid":"PBO:0062824"}


id: PBO:0081086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 16","termid":"PBO:0081086"}


id: PBO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit (predicted)","termid":"PBO:0001522"}


id: PBO:0091897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, probably longer, possible ght6 antisense","termid":"PBO:0091897"}


id: PBO:0078950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 2-1","termid":"PBO:0078950"}


id: PBO:0081617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 546","termid":"PBO:0081617"}


id: GO:0150002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree that is farthest away from the neuronal cell body (the soma).","definition_xrefs":["GOC:bc","GOC:aruk","PMID:20629984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"distal dendrite","termid":"GO:0150002"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: GO:0046588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of calcium-dependent cell-cell adhesion","termid":"GO:0046586"},{"relation_name":"negatively_regulates","term_name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","termid":"GO:0016339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of calcium-dependent cell-cell adhesion","synonyms":[{"name":"down regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"down-regulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"downregulation of calcium-dependent cell-cell adhesion","type":"exact"},{"name":"inhibition of calcium-dependent cell-cell adhesion","type":"narrow"}],"termid":"GO:0046588"}


id: MOD:01961
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01785. Remap to MOD:01785.","definition_xrefs":["RESID:AA0536#THR","PubMed:18555071","PubMed:17687277","PubMed:16618936","PubMed:17051152"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01961 O-(L-isoglutamyl)-L-threonine (THR) (obsolete MOD:01961)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01961"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


id: PBO:0072530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 60","termid":"PBO:0072530"}


id: SO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates late in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late_origin_of_replication","synonyms":[{"name":"late origin","type":"exact"},{"name":"late origin of replication","type":"exact"},{"name":"late replication origin","type":"exact"}],"termid":"SO:0002141"}


id: PBO:0090623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydantoin racemase family, implicated in amino acid, or derivative metabolism","termid":"PBO:0090623"}


id: PBO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0030846"}


id: PBO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 3","termid":"PBO:0072114"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: PBO:0085472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Presumed antiporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; expression of gene is up-regulated in cells exhibiting reduced susceptibility to azoles","termid":"PBO:0085472"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00443","PRO:DNx","PANTHER:PTHR10359:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: GO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"}],"termid":"GO:0002879"}


id: PBO:0039190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akirin 1 pseudogene 1","termid":"PBO:0039190"}


id: GO:0046248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-pinene metabolic process","termid":"GO:0018867"},{"relation_name":"is_a","term_name":"monoterpene biosynthetic process","termid":"GO:0043693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-pinene biosynthetic process","synonyms":[{"name":"alpha-pinene anabolism","type":"exact"},{"name":"alpha-pinene biosynthesis","type":"exact"},{"name":"alpha-pinene formation","type":"exact"},{"name":"alpha-pinene synthesis","type":"exact"}],"termid":"GO:0046248"}


id: GO:1903702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an esophagus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","ISBN:0-683-40008-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"esophagus development","synonyms":[{"name":"esophageal development","type":"exact"},{"name":"gullet development","type":"exact"},{"name":"oesophagus development","type":"exact"}],"termid":"GO:1903702"}


id: PR:Q9Y7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.02","synonyms":[{"name":"PGP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gep4","type":"exact"}],"termid":"PR:Q9Y7U3"}


id: PBO:0111344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNA associated protein Dip2","termid":"PBO:0111344"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: PBO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1 like","termid":"PBO:0050847"}


id: PBO:0088074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease involved in protein deubiquitination; forms a complex with AAA peroxins Pex1p and Pex6p; deubiquitinates mono- and polyubiquitinated forms of Pex5p; deubiquitinates Clb5p, counteracting APC activity, and facilitating both Clb5p accumulation and S phase entry; physically interacts with anaphase-promoting complex/cyclosome (APC/C) activator, Cdh1p; catalytic activity regulated by an N-terminal TRAF-like domain and and C-terminal sequences","termid":"PBO:0088074"}


id: GO:0000245
data:
  {"annotated_genes":["SJAG_00911","SJAG_03995","SJAG_00225","SJAG_01870","SJAG_01008","SJAG_02185","SJAG_04538","SJAG_04911","SJAG_01654","SJAG_01214","SJAG_00147","SJAG_05231","SJAG_02279","SJAG_02058","SJAG_03214","SJAG_04163","SJAG_00313","SJAG_02558","SJAG_03983","SJAG_00474","SJAG_00058","SJAG_05009","SJAG_04230","SJAG_04214","SJAG_01015","SJAG_02573","SJAG_00498","SJAG_02843","SJAG_00322","SJAG_03469","SJAG_02304","SJAG_01301","SJAG_01440"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74863,89471,91440,97822,99295,101553,104834,106992,107199],"is_not":false,"summary":null,"term":"GO:0000245"},{"annotations":[113859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[97324,104934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000389"},{"annotations":[91282,93932,106700,106133,106725,111304,109342,91710,108432,90104,87663,101935,98627,106715,98788,91027],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[99293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000348"},{"annotations":[73341,103006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006376"},{"annotations":[102827,108515,109923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.","definition_xrefs":["PMID:9476892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01440":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02058":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02573":null,"SJAG_02843":null,"SJAG_03214":null,"SJAG_03469":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"spliceosomal complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spliceosome assembly","type":"broad"}],"termid":"GO:0000245","terms_by_termid":{"GO:0000245":null,"GO:0000348":null,"GO:0000354":null,"GO:0000389":null,"GO:0000395":null,"GO:0006376":null,"GO:1903241":null}}


id: PBO:0083895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup159p); NUP116 has a paralog, NUP100, that arose from the whole genome duplication","termid":"PBO:0083895"}


id: GO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-(L-gamma-glutamyl)-L-lysine = L-lysine + 5-oxo-L-proline.","definition_xrefs":["PMID:6107907","PMID:20110353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gamma-glutamylaminecyclotransferase activity","secondary_identifiers":["RHEA:16961","EC:4.3.2.8"],"termid":"GO:0061929"}


id: GO:0021591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular system development","termid":"GO:0021591"}


id: FYPO:0006493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased chitin synthase activity","termid":"FYPO:0006493"}


id: PBO:0083662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) membrane protein; involved in the translocation of soluble secretory proteins and insertion of membrane proteins into the ER membrane; may also have a role in the stress response but has only partial functional overlap with WSC1-3","termid":"PBO:0083662"}


id: PBO:0064187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 1","termid":"PBO:0064187"}


id: PBO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, predicted helix turn helix","termid":"PBO:0011459"}


id: PBO:0074604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11E","termid":"PBO:0074604"}


id: GO:1902681
data:
  {"annotated_genes":["SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99311],"is_not":false,"summary":null,"term":"GO:1902681"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of replication fork arrest at rDNA repeats.","definition_xrefs":["PMID:23260662","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"regulates","term_name":"replication fork arrest at rDNA repeats","termid":"GO:0031582"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of replication fork arrest at rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"regulation of replication fork blocking at rDNA repeats","type":"exact"}],"termid":"GO:1902681","terms_by_termid":{"GO:1902681":null}}


id: PBO:0053328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 159","termid":"PBO:0053328"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: PBO:0017487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates","termid":"PBO:0017487"}


id: SO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region immediately adjacent to a promoter which may or may not contain transcription factor binding sites.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_flanking_region","synonyms":[{"name":"promoter flanking region","type":"exact"}],"termid":"SO:0001952"}


id: PBO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 4","termid":"PBO:0070426"}


id: FYPO:0002839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromosome during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002839"}


id: GO:0097491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection guidance","synonyms":[{"name":"sympathetic neurite guidance","type":"narrow"},{"name":"sympathetic neuron process guidance","type":"exact"},{"name":"sympathetic neuron protrusion guidance","type":"exact"},{"name":"sympathetic neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097491"}


id: PBO:0094073
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele_variant","termid":"PBO:0094073"}


id: PBO:0082129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin- and formin-interacting protein; nucleation-promoting factor (NPF) for Bni1p and Bnr1p during actin cable assembly and organization; enhances Bnr1p-mediated actin nucleation, alleviating Hof1p inhibition through competitive binding; interacts with Bni1p via a C-terminal triple helical coiled-coil domain; role in polarized cell growth; isolated as a bipolar budding mutant; localizes to the presumptive bud site, small bud tips, the bud neck and secretory vesicles; potential Cdc28p substrate","termid":"PBO:0082129"}


id: GO:0016324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of the plasma membrane located at the apical end of the cell.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"apical plasma membrane","termid":"GO:0016324"}


id: PBO:0073247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 1","termid":"PBO:0073247"}


id: PBO:0052095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 12","termid":"PBO:0052095"}


id: GO:0003883
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83945],"is_not":false,"summary":null,"term":"GO:0003883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UTP + glutamine + H20= ADP + phosphate + CTP + glutamate.","definition_xrefs":["PMID:12354108","RHEA:26426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"CTP synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-504054","EC:6.3.4.2","Reactome:R-HSA-73647","MetaCyc:CTPSYN-RXN"],"synonyms":[{"name":"CTP synthetase activity","type":"related"},{"name":"UTP--ammonia ligase activity","type":"related"},{"name":"UTP:ammonia ligase (ADP-forming)","type":"related"},{"name":"cytidine 5'-triphosphate synthetase activity","type":"related"},{"name":"cytidine triphosphate synthetase activity","type":"related"},{"name":"uridine triphosphate aminase activity","type":"related"}],"termid":"GO:0003883","terms_by_termid":{"GO:0003883":null}}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: FYPO:0003153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during cellular response to heat","synonyms":[{"name":"normal protein accumulation during cellular response to heat","type":"related"},{"name":"normal protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003153"}


id: PBO:0065666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRN2 antisense RNA 1","termid":"PBO:0065666"}


id: PBO:0069411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 672, pseudogene","termid":"PBO:0069411"}


id: PBO:0085827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; gene expression increases in cultures shifted to a lower temperature; protein abundance increases in response to DNA replication stress","termid":"PBO:0085827"}


id: GO:0033518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing one or more phosphate group from myo-inositol hexakisphosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol hexakisphosphate dephosphorylation (obsolete GO:0033518)","synonyms":[{"name":"phytate dephosphorylation","type":"exact"}],"termid":"GO:0033518"}


id: PBO:0059104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 2 pseudogene 1","termid":"PBO:0059104"}


id: PBO:0066089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA2 intronic transcript 1","termid":"PBO:0066089"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86673,86674,97475,97476],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["EC:2.5.1.58","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647978","Reactome:R-HSA-2530501","MetaCyc:RXN-17573","GO:0018223","RHEA:13345"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: GO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that spans a cell membrane and possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor serine/threonine kinase binding","termid":"GO:0033612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}


id: FYPO:0004471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleolus is observed there during telophase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleolus during mitotic telophase","synonyms":[{"name":"ectopic protein localization to nucleolus during mitotic telophase","type":"exact"},{"name":"protein mislocalised to nucleolus during mitotic telophase","type":"exact"},{"name":"protein mislocalised to nucleolus during telophase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleolus during mitotic telophase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleolus during telophase of mitosis","type":"exact"}],"termid":"FYPO:0004471"}


id: MOD:01887
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A, to form Uniblue A lysine adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"Uniblue A derivatized residue","termid":"MOD:01659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uniblue A derivatized lysine","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonate","type":"exact"},{"name":"N6UniblueALys","type":"exact"},{"name":"Uniblue A","type":"exact"}],"termid":"MOD:01887"}


id: GO:2001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"negatively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of mediator complex assembly","termid":"GO:2001177"}


id: PBO:0087851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transaldolase of unknown function; transcription is repressed by Mot1p and induced by alpha-factor and during diauxic shift; NQM1 has a paralog, TAL1, that arose from the whole genome duplication","termid":"PBO:0087851"}


id: GO:0061176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a glutamatergic neuron, containing the specialized apparatus necessary for the tonic release neurotransmitters that will induce the contraction of muscle. Type Ib terminal boutons are larger than type Is terminal boutons.","definition_xrefs":["GOC:dph","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type Ib terminal bouton","synonyms":[{"name":"type Ib terminal button","type":"exact"}],"termid":"GO:0061176"}


id: GO:0030754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 5,7,4'-trihydroxyflavone = S-adenosyl-L-homocysteine + 4'-methoxy-5,7-dihydroxyflavone.","definition_xrefs":["EC:2.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"apigenin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:APIGENIN-4-O-METHYLTRANSFERASE-RXN","RHEA:20429"],"synonyms":[{"name":"S-adenosyl-L-methionine:5,7,4'-trihydroxyflavone 4'-O-methyltransferase activity","type":"related"},{"name":"flavonoid O-methyltransferase activity","type":"broad"},{"name":"flavonoid methyltransferase activity","type":"related"}],"termid":"GO:0030754"}


id: PBO:0085368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoserine phosphatase of the phosphoglycerate pathway; involved in serine and glycine biosynthesis, expression is regulated by the available nitrogen source","termid":"PBO:0085368"}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: PBO:0028778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028778"}


id: PBO:0043719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 7","termid":"PBO:0043719"}


id: GO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.","definition_xrefs":["PMID:12865422","PMID:10589671","PMID:11743021"],"gene_count":0,"genotype_count":0,"name":"obsolete Sin3 complex (obsolete GO:0016580)","termid":"GO:0016580"}


id: PBO:0064956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 8","termid":"PBO:0064956"}


id: PBO:0056686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 6","termid":"PBO:0056686"}


id: GO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotrophin production","synonyms":[{"name":"down regulation of neurotrophin production","type":"exact"},{"name":"down-regulation of neurotrophin production","type":"exact"},{"name":"downregulation of neurotrophin production","type":"exact"},{"name":"inhibition of neurotrophin production","type":"narrow"}],"termid":"GO:0032900"}


id: PBO:0088934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermembrane lipid transfer protein, chorein family Vps13a","termid":"PBO:0088934"}


id: GO:0099515
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112246,104207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The transport of organelles or other particles from one location in the cell to another along actin filaments.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dos","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"actin filament-based transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099515","terms_by_termid":{"GO:0030050":null}}


id: PBO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 1","termid":"PBO:0075303"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: GO:0039603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Selective and non-covalent interaction of a viral protein with a member of the class of TATA-binding proteins (TBP) in the host, including any of the TBP-related factors (TRFs), which contributes to the viral-suppression of assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template.","definition_xrefs":["GOC:vw","PMID:11968006"],"gene_count":0,"genotype_count":0,"name":"obsolete TBP-class protein binding involved in viral suppression of host transcription initiation from RNA polymerase II promoter (obsolete GO:0039603)","termid":"GO:0039603"}


id: PR:P78761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qcr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.10","synonyms":[{"name":"Spom972h-qcr2","type":"exact"},{"name":"complex III subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"core protein II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex core protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78761"}


id: GO:0018858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + benzoate + CoA = AMP + benzoyl-CoA + diphosphate.","definition_xrefs":["RHEA:10132","EC:6.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"benzoate-CoA ligase activity","secondary_identifiers":["UM-BBD_reactionID:r0189","KEGG_REACTION:R01422","MetaCyc:BENZOATE--COA-LIGASE-RXN"],"synonyms":[{"name":"benzoate-coenzyme A ligase activity","type":"related"},{"name":"benzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"benzoyl CoA synthetase (AMP forming)","type":"related"},{"name":"benzoyl-coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018858"}


id: GO:1901933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"bicyclogermacrene catabolic process","synonyms":[{"name":"bicyclogermacrene breakdown","type":"exact"},{"name":"bicyclogermacrene catabolism","type":"exact"},{"name":"bicyclogermacrene degradation","type":"exact"}],"termid":"GO:1901933"}


id: PBO:0073016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit gamma","termid":"PBO:0073016"}


id: PBO:0078524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 15","termid":"PBO:0078524"}


id: PBO:0064236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCL2 antisense RNA 1","termid":"PBO:0064236"}


id: PBO:0003461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transporter (predicted)","termid":"PBO:0003461"}


id: PBO:0005146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like protein","termid":"PBO:0005146"}


id: PBO:0076712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 15","termid":"PBO:0076712"}


id: PBO:0013454
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013454"}


id: GO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III type 2 promoter by a TFIIIC-type factor, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III type 2 promoter TFIIIB-type transcription factor activity (obsolete GO:0001028)","synonyms":[{"name":"RNA polymerase III type 2 promoter polymerase recruiting transcription factor activity","type":"related"}],"termid":"GO:0001028"}


id: PBO:0050524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D12","termid":"PBO:0050524"}


id: GO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"IDP metabolic process","synonyms":[{"name":"IDP metabolism","type":"exact"}],"termid":"GO:0046707"}


id: GO:2000275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000275"}


id: MOD:01493
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["OMSSA:170","Unimod:533#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115nterm","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01493"}


id: PBO:0082678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; complex is involved in ubiquitin-dependent sorting of proteins into the endosome; conserved C-terminal domain interacts with ESCRT-III subunit Vps20p; other members include Stp22p, Srn2p, Vps28p, and Mvb12p","termid":"PBO:0082678"}


id: PBO:0050032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR alpha","termid":"PBO:0050032"}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_00885","SJAG_02948","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88539,103332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[70924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[70923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: GO:0048170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-term neuronal synaptic plasticity","termid":"GO:0048169"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term neuronal synaptic plasticity","synonyms":[{"name":"activation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"stimulation of long-term neuronal synaptic plasticity","type":"narrow"},{"name":"up regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"up-regulation of long-term neuronal synaptic plasticity","type":"exact"},{"name":"upregulation of long-term neuronal synaptic plasticity","type":"exact"}],"termid":"GO:0048170"}


id: GO:0033943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in (1->3)-beta-D-galactopyranans.","definition_xrefs":["EC:3.2.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-galactosidase activity","termid":"GO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"galactan 1,3-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.145-RXN"],"synonyms":[{"name":"galactan (1,3)-beta-D-galactosidase activity","type":"related"},{"name":"galactan (1->3)-beta-D-galactosidase activity","type":"related"}],"termid":"GO:0033943"}


id: PBO:0079556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 9","termid":"PBO:0079556"}


id: GO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein ubiquitination","synonyms":[{"name":"activation of protein ubiquitination","type":"narrow"},{"name":"stimulation of protein ubiquitination","type":"narrow"},{"name":"up regulation of protein ubiquitination","type":"exact"},{"name":"up-regulation of protein ubiquitination","type":"exact"},{"name":"upregulation of protein ubiquitination","type":"exact"}],"termid":"GO:0031398"}


id: PBO:0028116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tributyltin","termid":"PBO:0028116"}


id: GO:0009778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic phosphorylation process in which ATP synthesis is driven by a proton gradient generated across the thylakoid membrane. Involves only photosystem I.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic phosphorylation","termid":"GO:0009777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"cyclic photosynthetic phosphorylation","termid":"GO:0009778"}


id: PBO:0078668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-3","termid":"PBO:0078668"}


id: SO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region found within the modular centromere.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:centromeric_repeat","type":"exact"},{"name":"centromeric repeat","type":"exact"}],"termid":"SO:0001797"}


id: GO:0016201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemorepellent signals that inhibit its growth toward the source.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target inhibition","termid":"GO:0016201"}


id: PR:Q9P7W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ARM-like repeat-containing protein C1703.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.03c","synonyms":[{"name":"Spom972h-syo2","type":"exact"}],"termid":"PR:Q9P7W7"}


id: PBO:0052252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 21","termid":"PBO:0052252"}


id: FYPO:0000835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level","synonyms":[{"name":"decreased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: decreased","type":"related"},{"name":"reduced protein level","type":"exact"}],"termid":"FYPO:0000835"}


id: GO:0021527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:cls","PMID:11262869","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"dorsal spinal cord development","termid":"GO:0021516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron differentiation","synonyms":[{"name":"spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:0021527"}


id: GO:0061090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of sequestering of zinc ion. Sequestering of zinc ion is the process of binding or confining zinc ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sequestering of zinc ion (obsolete GO:0061090)","termid":"GO:0061090"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: PBO:0087967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of thiamine or related compound; contributes to uptake of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine); shares sequence similarity with Thi7p","termid":"PBO:0087967"}


id: PATO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Easily reduced to powder or easily fragmentable or crumbly.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"friability","termid":"PATO:0002405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friable","termid":"PATO:0002406"}


id: PBO:0069315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 573, pseudogene","termid":"PBO:0069315"}


id: GO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonylglycine + H2O + H+ = benzyl alcohol + CO2 + glycine.","definition_xrefs":["EC:3.5.1.58","RHEA:20900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-benzyloxycarbonylglycine hydrolase activity","secondary_identifiers":["MetaCyc:N-BENZYLOXYCARBONYLGLYCINE-HYDROLASE-RXN","KEGG_REACTION:R02551"],"synonyms":[{"name":"N-benzyloxycarbonylglycine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylglycine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase I","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase activity","type":"related"},{"name":"nalpha-carbobenzoxyamino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050125"}


id: PBO:0058377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4749","termid":"PBO:0058377"}


id: PBO:0087240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase involved in cell cycle regulation and rDNA integrity; associated with late pre-40S particles via its conserved C-terminal domain; prevents premature use of pre-40S particles in translation; association with pre-40S particles regulated by its catalytic ATPase site and likely occurs after the release of Rio2p from these particles; involved in cell cycle progression and processing of the 20S pre-rRNA into mature 18S rRNA; phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0087240"}


id: GO:1905010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7499219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"positively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-lysine import across plasma membrane","synonyms":[{"name":"activation of L-lysine import into cell","type":"narrow"},{"name":"positive regulation of L-lysine import into cell","type":"exact"},{"name":"up regulation of L-lysine import into cell","type":"exact"},{"name":"up-regulation of L-lysine import into cell","type":"exact"},{"name":"upregulation of L-lysine import into cell","type":"exact"}],"termid":"GO:1905010"}


id: GO:0035217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the labial imaginal disc over time, from its initial formation through to its metamorphosis to form adult structures including parts of the proboscis.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labial disc development","termid":"GO:0035217"}


id: PBO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.7","termid":"PBO:0000432"}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:14607247","PMID:19520858"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: PBO:0055692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1","termid":"PBO:0055692"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: SO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe the kind of biological sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymer_attribute","synonyms":[{"name":"polymer attribute","type":"exact"}],"termid":"SO:0000443"}


id: GO:0052131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen.","definition_xrefs":["GOC:dph","GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerotaxis","termid":"GO:0009454"},{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"is_a","term_name":"positive energy taxis","termid":"GO:0052128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive aerotaxis","termid":"GO:0052131"}


id: PATO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fecundity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fecundity","termid":"PATO:0000273"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased fecundity","synonyms":[{"name":"low fecundity","type":"exact"}],"termid":"PATO:0001696"}


id: PBO:0046440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 1","termid":"PBO:0046440"}


id: PBO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 2 like","termid":"PBO:0045102"}


id: PBO:0055604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3042","termid":"PBO:0055604"}


id: GO:0071951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of methionine charged on a tRNA(fMet) to N-formyl-methionine-tRNA(fMet).","definition_xrefs":["PMID:5337045","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"conversion of methionyl-tRNA to N-formyl-methionyl-tRNA","termid":"GO:0071951"}


id: PBO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp6","termid":"PBO:0005416"}


id: PATO:0000743
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000743 arousal value (obsolete PATO:0000743)","termid":"PATO:0000743"}


id: PBO:0002553
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.51","termid":"PBO:0002553"}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: PBO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 15","termid":"PBO:0046573"}


id: PBO:0066782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 80","termid":"PBO:0066782"}


id: PBO:0086669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086669"}


id: PBO:0029025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_gamma-tubulin_complex_assembly","termid":"PBO:0029025"}


id: PBO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 5","termid":"PBO:0071382"}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: MOD:01068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tryptophan residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tryptophan","synonyms":[{"name":"HalTrp","type":"exact"}],"termid":"MOD:01068"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: PBO:0053833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1098","termid":"PBO:0053833"}


id: SO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is di-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_dimethylation_site","synonyms":[{"name":"H3K79 di-methylation site","type":"exact"},{"name":"H3K79Me2","type":"related"}],"termid":"SO:0001711"}


id: PBO:0071061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 63","termid":"PBO:0071061"}


id: FYPO:0005379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal spindle pole body organization","termid":"FYPO:0005378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body","synonyms":[{"name":"normal SPB","type":"exact"}],"termid":"FYPO:0005379"}


id: FYPO:0005819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the neddylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein neddylation during vegetative growth","synonyms":[{"name":"abnormal protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005819"}


id: PBO:0089060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, MIZ-type","termid":"PBO:0089060"}


id: MOD:01863
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems mTRAQ reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"mTRAQ reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"}],"termid":"MOD:01863"}


id: PBO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 20","termid":"PBO:0071018"}


id: GO:0019856
data:
  {"annotated_genes":["SJAG_00694","SJAG_04354","SJAG_00412","SJAG_05024","SJAG_00779","SJAG_00392","SJAG_00444","SJAG_00964","SJAG_00197","SJAG_03164"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85581],"is_not":false,"summary":null,"term":"GO:0019856"},{"annotations":[83943,94591,102577,111626,89512,107977,107140,112775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[88071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base anabolism","type":"exact"},{"name":"pyrimidine base biosynthesis","type":"exact"},{"name":"pyrimidine base biosynthetic process","type":"exact"},{"name":"pyrimidine base formation","type":"exact"},{"name":"pyrimidine base synthesis","type":"exact"}],"termid":"GO:0019856","terms_by_termid":{"GO:0006207":null,"GO:0006223":null,"GO:0019856":null}}


id: PBO:0071659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL37A divergent transcript","termid":"PBO:0071659"}


id: GO:1990382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22511774"],"gene_count":0,"genotype_count":0,"name":"obsolete melanosome assembly (obsolete GO:1990382)","synonyms":[{"name":"melanosome biogenesis","type":"exact"}],"termid":"GO:1990382"}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: PBO:0082773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p","termid":"PBO:0082773"}


id: GO:0021807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of soluble factors and receptors that result in the movement of cells in the primitive cerebral cortex.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"initiation of movement involved in cerebral cortex radial glia guided migration","termid":"GO:0021806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"motogenic signaling initiating cell movement in cerebral cortex","synonyms":[{"name":"motogenic signalling initiating cell movement in the cerebral cortex","type":"exact"}],"termid":"GO:0021807"}


id: PBO:0053021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LANCL1 antisense RNA 1","termid":"PBO:0053021"}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PBO:0046888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM9C pseudogene 1","termid":"PBO:0046888"}


id: PR:O14236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar GTP-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.03c","secondary_identifiers":["UniProtKB:O14236"],"synonyms":[{"name":"SPAC6F6.03c","type":"related"},{"name":"Spom972h-GNL2","type":"exact"}],"termid":"PR:O14236"}


id: PBO:0082700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Mcm2-7 hexameric helicase complex; MCM complex is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase","termid":"PBO:0082700"}


id: GO:0016875
data:
  {"annotated_genes":["SJAG_04840","SJAG_03585","SJAG_00103","SJAG_01159","SJAG_04482","SJAG_00443","SJAG_00653","SJAG_04473","SJAG_03626","SJAG_03277","SJAG_01259","SJAG_04738","SJAG_02206","SJAG_01197","SJAG_04094","SJAG_01797","SJAG_02236","SJAG_02428","SJAG_04856","SJAG_00488","SJAG_04285","SJAG_16456","SJAG_02977","SJAG_02015","SJAG_04409","SJAG_00420","SJAG_04762","SJAG_01522","SJAG_02263","SJAG_01352","SJAG_02517","SJAG_01235","SJAG_00243","SJAG_03545","SJAG_03071","SJAG_02615"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004813"},{"annotations":[68332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004812"},{"annotations":[103284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004814"},{"annotations":[98350,101133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004816"},{"annotations":[110114,114075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004815"},{"annotations":[91678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004817"},{"annotations":[97535,86451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004818"},{"annotations":[105367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004819"},{"annotations":[93109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004820"},{"annotations":[104439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004821"},{"annotations":[112108,108705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004822"},{"annotations":[91148,94187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004823"},{"annotations":[101431,111729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004824"},{"annotations":[91346,101267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004825"},{"annotations":[114063,89729,93312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004826"},{"annotations":[103181,101981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004827"},{"annotations":[91537,90766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004828"},{"annotations":[90575,103353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004829"},{"annotations":[93394,92006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004830"},{"annotations":[113435,111096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004831"},{"annotations":[93769,100736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004832"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules via a carbon-oxygen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","EC:6.1.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00243":null,"SJAG_00420":null,"SJAG_00443":null,"SJAG_00488":null,"SJAG_00653":null,"SJAG_01159":null,"SJAG_01197":null,"SJAG_01235":null,"SJAG_01259":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02206":null,"SJAG_02236":null,"SJAG_02263":null,"SJAG_02428":null,"SJAG_02517":null,"SJAG_02615":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03277":null,"SJAG_03545":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_04094":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04482":null,"SJAG_04738":null,"SJAG_04762":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming carbon-oxygen bonds","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0016875","terms_by_termid":{"GO:0004812":null,"GO:0004813":null,"GO:0004814":null,"GO:0004815":null,"GO:0004816":null,"GO:0004817":null,"GO:0004818":null,"GO:0004819":null,"GO:0004820":null,"GO:0004821":null,"GO:0004822":null,"GO:0004823":null,"GO:0004824":null,"GO:0004825":null,"GO:0004826":null,"GO:0004827":null,"GO:0004828":null,"GO:0004829":null,"GO:0004830":null,"GO:0004831":null,"GO:0004832":null}}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: PBO:0012312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 2, Pre8 (predicted)","termid":"PBO:0012312"}


id: GO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart capillary growth","termid":"GO:0003248"}


id: PBO:0041328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 81","termid":"PBO:0041328"}


id: GO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylamine + a trimethylamine corrinoid protein = a methylated trimethylamine corrinoid protein + dimethylamine.","definition_xrefs":["PMID:9006042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"trimethylamine methyltransferase activity","secondary_identifiers":["EC:2.1.1.250","MetaCyc:RXN-8102","RHEA:39287"],"synonyms":[{"name":"MT1","type":"broad"},{"name":"TMA methyltransferase 1","type":"exact"},{"name":"mttB1","type":"related"},{"name":"trimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"trimethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043834"}


id: PBO:0038326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_biological_role","termid":"PBO:0038326"}


id: PBO:0066654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 2","termid":"PBO:0066654"}


id: PBO:0084194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT2); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage","termid":"PBO:0084194"}


id: PBO:0078942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 9-1","termid":"PBO:0078942"}


id: MOD:00080
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-methyl-L-glutamine.","definition_xrefs":["DeltaMass:166","PubMed:11118225","PubMed:365579","RESID:AA0071","PubMed:11875433","ChEBI:17592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-glutamine","termid":"MOD:00722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N5-methyl-L-glutamine","synonyms":[{"name":"(2S)-2-amino-5-methylamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-methylpentanediamic acid","type":"exact"},{"name":"MOD_RES N5-methylglutamine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylglutamine","type":"exact"},{"name":"N-methylglutamine","type":"exact"},{"name":"N5-methyl-L-glutamine","type":"exact"},{"name":"N5-methylated L-glutamine","type":"exact"},{"name":"N5Me1Gln","type":"exact"},{"name":"gamma-methylglutamine","type":"exact"}],"termid":"MOD:00080"}


id: PBO:0059044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS19 homolog, cytosolic iron-sulfur assembly component","termid":"PBO:0059044"}


id: PBO:0042712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 3","termid":"PBO:0042712"}


id: PBO:0044941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0044941"}


id: PBO:0049638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 41","termid":"PBO:0049638"}


id: PBO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2","termid":"PBO:0075322"}


id: GO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex formed by a recombinase, a regulatory protein, and the DNA sequences bound by each protein; catalyzes a reversible site-specific recombination reaction that results in the alternate expression of one or more genes in various contexts.","definition_xrefs":["PMID:9732277","PMID:11114897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"invertasome","termid":"GO:0031421"}


id: PBO:0036546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein, human C6orf136 ortholog","termid":"PBO:0036546"}


id: GO:0032122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the oral apparatus. The oral apparatus is a funnel-like structure used by the cell to collect food and channel it to the cytostome, characteristic of ciliate protozoans.","definition_xrefs":["PMID:10503189","PMID:6414830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral apparatus organization","synonyms":[{"name":"oral apparatus morphogenesis","type":"related"},{"name":"oral apparatus organisation","type":"exact"},{"name":"oral apparatus organization and biogenesis","type":"related"},{"name":"stomatogenesis","type":"related"}],"termid":"GO:0032122"}


id: PBO:0074553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 6","termid":"PBO:0074553"}


id: PBO:0048409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GASK1B antisense RNA 1","termid":"PBO:0048409"}


id: SO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinous stretch of DNA that encompass all the TFRSs that regulate a promoter.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_collection","synonyms":[{"name":"TFRS collection","type":"exact"},{"name":"transcription factor regulatory site collection","type":"exact"}],"termid":"SO:0002297"}


id: PBO:0034686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_in_euchromatin","termid":"PBO:0034686"}


id: GO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism modulates the frequency, rate or extent of the innate immune response, the first line of defense against infection, of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction (obsolete GO:0052308)","synonyms":[{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent modulation by organism of innate immunity in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052308"}


id: PBO:0049680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HADHB pseudogene 1","termid":"PBO:0049680"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["PMID:22128786","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_04675","SJAG_02834","SJAG_00792","SJAG_04032","SJAG_04743","SJAG_02474","SJAG_00532","SJAG_02735","SJAG_04607","SJAG_00822","SJAG_00802","SJAG_04031","SJAG_04867","SJAG_02457","SJAG_01694","SJAG_03862","SJAG_04677","SJAG_01004"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74007,85403,88403,89050,90164,92379,96560,100337,103481,109946],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[90213,99871,88551,90205],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[99880],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[88548,88552,99873,108857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[61323,106851,61567,106852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null}}


id: PBO:0085169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycosylated protein required for cell wall stability; attached to the cell wall via beta-1,3-glucan; mediates mitochondrial translocation of Apn1p; expression regulated by the cell integrity pathway and by Swi5p during the cell cycle; PIR1 has a paralog, YJL160C, that arose from the whole genome duplication","termid":"PBO:0085169"}


id: GO:0080023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a (3R)-3-hydroxyacyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["PMID:16982622","RHEA:26526"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxyacyl-CoA dehydratase activity (obsolete GO:0080023)","synonyms":[{"name":"3R-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0080023"}


id: PBO:0063444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6H","termid":"PBO:0063444"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: GO:0090661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A box H/ACA ribonucleoprotein complex that contains the RNA component of vertebrate telomerase, the enzyme essential for the replication of chromosome termini in most eukaryotes. This ribonucleoprotein complex is a structural box H/ACA RNP, which does not have the catalytic pseudouridylation function shared by the majority of H/ACA RNPs present in the cell.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","PMID:22527283","GOC:jbu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box H/ACA RNP complex","termid":"GO:0072588"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"telomerase holoenzyme complex","termid":"GO:0005697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"box H/ACA telomerase RNP complex","termid":"GO:0090661"}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: GO:1902127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:9872995","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(-)-lariciresinol metabolic process","synonyms":[{"name":"(-)-lariciresinol metabolism","type":"exact"}],"termid":"GO:1902127"}


id: PATO:0001193
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the side relative to another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral to","synonyms":[{"name":"lateral","type":"exact"}],"termid":"PATO:0001193"}


id: PR:O59932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght4 gene.","definition_xrefs":["UniProtKB:O59932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.08","synonyms":[{"name":"Spom972h-ght4","type":"exact"},{"name":"hexose transporter 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59932"}


id: PBO:0040256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 intronic transcript 1","termid":"PBO:0040256"}


id: PBO:0077246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 6","termid":"PBO:0077246"}


id: PBO:0069118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 367, pseudogene","termid":"PBO:0069118"}


id: GO:0035251
data:
  {"annotated_genes":["SJAG_02222","SJAG_00394","SJAG_04571","SJAG_01862","SJAG_00129","SJAG_03587","SJAG_05285","SJAG_01531","SJAG_00876","SJAG_01288","SJAG_01646","SJAG_00182","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111877,102167,90564,87694,109231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[97138,92624,89440,73382,87951,93244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[111878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[107151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[109837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1912353"],"termid":"GO:0035251","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0140752":null}}


id: GO:1902553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of catalase activity.","definition_xrefs":["GOC:TermGenie","PMID:24285797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalase activity","termid":"GO:1902551"},{"relation_name":"is_a","term_name":"positive regulation of peroxidase activity","termid":"GO:2000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalase activity","synonyms":[{"name":"activation of CAT","type":"related"},{"name":"activation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"activation of caperase activity","type":"narrow"},{"name":"activation of catalase activity","type":"narrow"},{"name":"activation of catalase reaction","type":"narrow"},{"name":"activation of catalase-peroxidase activity","type":"narrow"},{"name":"activation of equilase activity","type":"narrow"},{"name":"activation of haem catalase activity","type":"narrow"},{"name":"activation of heme catalase activity","type":"narrow"},{"name":"activation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"activation of manganese catalase activity","type":"narrow"},{"name":"activation of optidase activity","type":"narrow"},{"name":"positive regulation of CAT","type":"related"},{"name":"positive regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"positive regulation of caperase activity","type":"exact"},{"name":"positive regulation of catalase reaction","type":"exact"},{"name":"positive regulation of catalase-peroxidase activity","type":"exact"},{"name":"positive regulation of equilase activity","type":"exact"},{"name":"positive regulation of haem catalase activity","type":"narrow"},{"name":"positive regulation of heme catalase activity","type":"narrow"},{"name":"positive regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of manganese catalase activity","type":"narrow"},{"name":"positive regulation of optidase activity","type":"exact"},{"name":"up regulation of CAT","type":"related"},{"name":"up regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up regulation of caperase activity","type":"exact"},{"name":"up regulation of catalase activity","type":"exact"},{"name":"up regulation of catalase reaction","type":"exact"},{"name":"up regulation of catalase-peroxidase activity","type":"exact"},{"name":"up regulation of equilase activity","type":"exact"},{"name":"up regulation of haem catalase activity","type":"narrow"},{"name":"up regulation of heme catalase activity","type":"narrow"},{"name":"up regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up regulation of manganese catalase activity","type":"narrow"},{"name":"up regulation of optidase activity","type":"exact"},{"name":"up-regulation of CAT","type":"related"},{"name":"up-regulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"up-regulation of caperase activity","type":"exact"},{"name":"up-regulation of catalase activity","type":"exact"},{"name":"up-regulation of catalase reaction","type":"exact"},{"name":"up-regulation of catalase-peroxidase activity","type":"exact"},{"name":"up-regulation of equilase activity","type":"exact"},{"name":"up-regulation of haem catalase activity","type":"narrow"},{"name":"up-regulation of heme catalase activity","type":"narrow"},{"name":"up-regulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"up-regulation of manganese catalase activity","type":"narrow"},{"name":"up-regulation of optidase activity","type":"exact"},{"name":"upregulation of CAT","type":"related"},{"name":"upregulation of bacterial catalase-peroxidase activity","type":"narrow"},{"name":"upregulation of caperase activity","type":"exact"},{"name":"upregulation of catalase activity","type":"exact"},{"name":"upregulation of catalase reaction","type":"exact"},{"name":"upregulation of catalase-peroxidase activity","type":"exact"},{"name":"upregulation of equilase activity","type":"exact"},{"name":"upregulation of haem catalase activity","type":"narrow"},{"name":"upregulation of heme catalase activity","type":"narrow"},{"name":"upregulation of hydrogen-peroxide:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"upregulation of manganese catalase activity","type":"narrow"},{"name":"upregulation of optidase activity","type":"exact"}],"termid":"GO:1902553"}


id: PBO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 2","termid":"PBO:0060497"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: PBO:0045509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 1","termid":"PBO:0045509"}


id: GO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic protein complex that is capable of activating caspase-1.","definition_xrefs":["GOC:dph","PMID:17599095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"canonical inflammasome complex","termid":"GO:0061702"}


id: PBO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by proline","termid":"PBO:0002215"}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: PR:Q9US03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.10","synonyms":[{"name":"Spom972h-klp2","type":"exact"}],"termid":"PR:Q9US03"}


id: GO:1904897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:15358192","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell proliferation","synonyms":[{"name":"regulation of Ito cell proliferation","type":"exact"},{"name":"regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"regulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904897"}


id: GO:0010185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular defense response.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular defense response","synonyms":[{"name":"regulation of cellular defence response","type":"exact"}],"termid":"GO:0010185"}


id: PBO:0045140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 9","termid":"PBO:0045140"}


id: PBO:0004695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Ssn6","termid":"PBO:0004695"}


id: GO:0019918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N'(omega)-dimethyl-L-arginine.","definition_xrefs":["RESID:AA0067","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine omega-N-methylation","termid":"GO:0035247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine methylation, to symmetrical-dimethyl arginine","termid":"GO:0019918"}


id: GO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-2 activity (obsolete GO:0004202)","synonyms":[{"name":"caspase-2 activity","type":"exact"}],"termid":"GO:0004202"}


id: GO:0102699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2-methylpropionitrile + O2 + NADPH = 2-hydroxy-2-methylpropanenitrile + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-methylpropionitrile hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-5082","RHEA:51964"],"termid":"GO:0102699"}


id: PBO:0081660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 584","termid":"PBO:0081660"}


id: PBO:0076918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFAP2E antisense RNA 1","termid":"PBO:0076918"}


id: PBO:0005101
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not detected in other Schizos","termid":"PBO:0005101"}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: PBO:0068979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 223, pseudogene","termid":"PBO:0068979"}


id: GO:0033013
data:
  {"annotated_genes":["SJAG_04109","SJAG_03173","SJAG_01786","SJAG_01841","SJAG_03862","SJAG_05283","SJAG_00366","SJAG_02876","SJAG_01372","SJAG_00699","SJAG_02896","SJAG_00097","SJAG_01192","SJAG_04397","SJAG_03961","SJAG_04944","SJAG_01155"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107941],"is_not":false,"summary":null,"term":"GO:0033013"},{"annotations":[89282,105601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[112694,91877,101249,109945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[66612,91878,113030,88443,92469,88941,90535,87085],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[111484,93894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[92470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrapyrrole metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"tetrapyrrole metabolism","type":"exact"}],"termid":"GO:0033013","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0033013":null,"GO:0042167":null}}


id: FYPO:0005511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any meiotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint phenotype","synonyms":[{"name":"fission yeast meiotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0005511"}


id: GO:0051905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pigment granule to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"pigment granule localization","termid":"GO:0051875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of pigment granule localization","synonyms":[{"name":"establishment of pigment granule localisation","type":"exact"}],"termid":"GO:0051905"}


id: PBO:0078718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 3-1","termid":"PBO:0078718"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: PBO:0054158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1525","termid":"PBO:0054158"}


id: GO:0006657
data:
  {"annotated_genes":["SJAG_00812","SJAG_01918","SJAG_03154","SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60904,84945,105351,108048,111806],"is_not":false,"summary":null,"term":"GO:0006657"}]},"cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with the phosphorylation of choline and ends with the combination of CDP-choline with diacylglycerol to form phosphatidylcholine.","definition_xrefs":["ISBN:0471331309","MetaCyc:PWY3O-450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00812":null,"SJAG_00946":null,"SJAG_01918":null,"SJAG_03154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-choline pathway","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"Kennedy pathway","type":"exact"},{"name":"phosphatidylcholine biosynthesis from choline","type":"exact"}],"termid":"GO:0006657","terms_by_termid":{"GO:0006657":null}}


id: PBO:0047110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 157 member C","termid":"PBO:0047110"}


id: PBO:0083578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter)","termid":"PBO:0083578"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"bicarbonate transport","synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: GO:0015562
data:
  {"annotated_genes":["SJAG_03899","SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[92131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a specific substance or related group of substances from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01183":null,"SJAG_03899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"efflux transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux permease activity","type":"exact"},{"name":"efflux transporter activity","type":"exact"},{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015562","terms_by_termid":{"GO:0034639":null,"GO:0080139":null}}


id: GO:0034209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an acetyl group to a sterol molecule. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:rb","PMID:18034159"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol acetylation (obsolete GO:0034209)","termid":"GO:0034209"}


id: PBO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 4","termid":"PBO:0050530"}


id: GO:1905150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transporter activity","termid":"GO:2000649"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of voltage-gated sodium channel activity","synonyms":[{"name":"regulation of voltage gated sodium channel activity","type":"exact"},{"name":"regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"regulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905150"}


id: PBO:0040628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell scaffold protein with ankyrin repeats 1","termid":"PBO:0040628"}


id: PBO:0109364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 2B","termid":"PBO:0109364"}


id: PBO:0028982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation","termid":"PBO:0028982"}


id: PBO:0069942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1235, pseudogene","termid":"PBO:0069942"}


id: PBO:0066644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 2","termid":"PBO:0066644"}


id: PBO:0040486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 7 like 2","termid":"PBO:0040486"}


id: PBO:0029040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_non-ionic_osmotic_stress","termid":"PBO:0029040"}


id: PBO:0036554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant C2 domain protein, human FAM102A and FAM102B ortholog","termid":"PBO:0036554"}


id: GO:0033129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone phosphorylation (obsolete GO:0033129)","termid":"GO:0033129"}


id: GO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic protozoa (obsolete GO:0001564)","synonyms":[{"name":"resistance to pathogenic protozoa","type":"exact"}],"termid":"GO:0001564"}


id: PBO:0076640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 2","termid":"PBO:0076640"}


id: PBO:0062678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily K member 1","termid":"PBO:0062678"}


id: PBO:0075594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spire type actin nucleation factor 1","termid":"PBO:0075594"}


id: GO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + ATP + UDP-N-acetylmuramate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanine.","definition_xrefs":["RHEA:23372","EC:6.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R03193","MetaCyc:UDP-NACMUR-ALA-LIG-RXN"],"synonyms":[{"name":"L-Ala ligase activity","type":"related"},{"name":"L-alanine-adding enzyme activity","type":"related"},{"name":"MurC synthetase activity","type":"narrow"},{"name":"UDP-MurNAc:L-alanine ligase activity","type":"related"},{"name":"UDP-N-acetylmuramate:L-alanine ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl:L-alanine ligase activity","type":"related"},{"name":"UDP-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"UDPMurNAc-L-alanine synthetase activity","type":"related"},{"name":"alanine-adding enzyme activity","type":"related"},{"name":"uridine 5'-diphosphate-N-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"uridine diphosphate N-acetylmuramate:L-alanine ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"uridine-diphosphate-N-acetylmuramate:L-alanine ligase activity","type":"related"}],"termid":"GO:0008763"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: GO:0021960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum.","definition_xrefs":["ISBN:0878937420","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior commissure morphogenesis","termid":"GO:0021960"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:32446654","PMID:23122962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: GO:0010186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular defense response.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"positively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular defense response","synonyms":[{"name":"activation of cellular defense response","type":"narrow"},{"name":"positive regulation of cellular defence response","type":"exact"},{"name":"stimulation of cellular defense response","type":"narrow"},{"name":"up regulation of cellular defense response","type":"exact"},{"name":"up-regulation of cellular defense response","type":"exact"},{"name":"upregulation of cellular defense response","type":"exact"}],"termid":"GO:0010186"}


id: PATO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000260 visual_acuity (obsolete PATO:0000260)","termid":"PATO:0000260"}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r0943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrene 1,2-monooxygenase activity","termid":"GO:0034927"}


id: PBO:0071856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 51","termid":"PBO:0071856"}


id: GO:0061133
data:
  {"annotated_genes":["SJAG_04484","SJAG_04211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105380,111323],"is_not":false,"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an endopeptidase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"},{"relation_name":"is_a","term_name":"endopeptidase regulator activity","termid":"GO:0061135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04211":null,"SJAG_04484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"endopeptidase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061133","terms_by_termid":{"GO:0061133":null}}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30893609","PMID:24251537","PMID:30181274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: FYPO:0004564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased alpha-galactosidase activity","termid":"FYPO:0004564"}


id: PBO:0043141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 9","termid":"PBO:0043141"}


id: GO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of eosinophil differentiation","termid":"GO:0045643"},{"relation_name":"negatively_regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil differentiation","synonyms":[{"name":"down regulation of eosinophil differentiation","type":"exact"},{"name":"down-regulation of eosinophil differentiation","type":"exact"},{"name":"downregulation of eosinophil differentiation","type":"exact"},{"name":"inhibition of eosinophil differentiation","type":"narrow"}],"termid":"GO:0045644"}


id: PBO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6B pseudogene","termid":"PBO:0062157"}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["EC:2.3.1.13","MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["RHEA:19869","Reactome:R-HSA-2534040"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: GO:1905363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:26911690","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"positively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of endosomal vesicle fusion","synonyms":[{"name":"activation of endosomal vesicle fusion","type":"narrow"},{"name":"activation of endosome vesicle fusion","type":"narrow"},{"name":"positive regulation of endosome vesicle fusion","type":"exact"},{"name":"up regulation of endosomal vesicle fusion","type":"exact"},{"name":"up regulation of endosome vesicle fusion","type":"exact"},{"name":"up-regulation of endosomal vesicle fusion","type":"exact"},{"name":"up-regulation of endosome vesicle fusion","type":"exact"},{"name":"upregulation of endosomal vesicle fusion","type":"exact"},{"name":"upregulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905363"}


id: GO:0097067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: PBO:0082469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin-binding actin-associated protein; roles in endocytic membrane tabulation and constriction, and exocytosis; N-BAR domain protein that interacts with Rvs161p to regulate actin cytoskeleton, endocytosis, and viability following starvation or osmotic stress; recruited to bud tips by Gyl1p and Gyp5p during polarized growth; homolog of mammalian amphiphysin; necessary for efficient trafficking of CoQ6 to mitochondria","termid":"PBO:0082469"}


id: PBO:0049541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 5","termid":"PBO:0049541"}


id: GO:1902603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transport","termid":"GO:0015879"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"carnitine transmembrane transport","termid":"GO:1902603"}


id: PR:C6Y4D2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp49 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4D2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein MRP49, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.19","synonyms":[{"name":"Spom972h-mrp49","type":"exact"}],"termid":"PR:C6Y4D2"}


id: PBO:0069049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 295, pseudogene","termid":"PBO:0069049"}


id: PBO:0057212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378b","termid":"PBO:0057212"}


id: PBO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ipc Mannosyl-Transferase homologue","termid":"PBO:0001515"}


id: GO:0031094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of membrane-bounded compartments found in blood platelets, where they regulate platelet activation by sequestering or releasing calcium. The dense tubular network exists as thin elongated membranes in resting platelets, and undergoes a major ultrastructural change, to a rounded vesicular form, upon addition of thrombin.","definition_xrefs":["PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network","termid":"GO:0031094"}


id: PBO:0068394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF213 antisense RNA 1","termid":"PBO:0068394"}


id: GO:0090258
data:
  {"annotated_genes":["SJAG_04203","SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99555,112363],"is_not":false,"summary":null,"term":"GO:0090258"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of mitochondrial fission","termid":"GO:0090140"},{"relation_name":"negatively_regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090258","terms_by_termid":{"GO:0090258":null}}


id: PBO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_nitrogen_starvation","termid":"PBO:0030732"}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: GO:0070340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a bacterial lipopeptide stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of bacterial lipoprotein","termid":"GO:0042494"},{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of bacterial lipopeptide","termid":"GO:0070340"}


id: GO:0098909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell contributing to the regulation of its contraction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"part_of","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential involved in regulation of contraction","termid":"GO:0098909"}


id: PBO:0040840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLCAP apoptosis inducing factor","termid":"PBO:0040840"}


id: MOD:01200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-heptosyl-L-threonine.","definition_xrefs":["Unimod:490#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-heptosyl-L-threonine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01200"}


id: SO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is skipped during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translational_frameshift","synonyms":[{"name":"plus 1 ribosomal frameshift","type":"exact"},{"name":"plus 1 translational frameshift","type":"exact"}],"termid":"SO:0001211"}


id: GO:0048246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage chemotaxis","termid":"GO:0048246"}


id: GO:2000386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"positively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovarian follicle development","synonyms":[{"name":"positive regulation of follicular phase","type":"related"}],"termid":"GO:2000386"}


id: GO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of myelin sheath","termid":"GO:0019911"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: PBO:0054795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2209","termid":"PBO:0054795"}


id: PBO:0082300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arsenate reductase required for arsenate resistance; converts arsenate to arsenite which can then be exported from cells by Arr3p","termid":"PBO:0082300"}


id: GO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aeciospore formation","termid":"GO:0075248"}


id: PBO:0062338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily D member 1 pseudogene","termid":"PBO:0062338"}


id: GO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-enclosed sac that takes up most of the volume of a mature plant cell. Functions include storage, separation of toxic byproducts, and cell growth determination.","definition_xrefs":["ISBN:9780815341116","Wikipedia:Vacuole"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"central vacuole","termid":"GO:0042807"}


id: GO:0007187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation or inhibition of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide.","definition_xrefs":["GOC:signaling","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","synonyms":[{"name":"G protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via cyclic nucleotide second messenger","type":"exact"}],"termid":"GO:0007187"}


id: PBO:0091645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase","termid":"PBO:0091645"}


id: GO:0005992
data:
  {"annotated_genes":["SJAG_01646","SJAG_01209","SJAG_01862","SJAG_00182","SJAG_00129","SJAG_01531","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73385,87947,89438,92621,93242,97136,104969],"is_not":false,"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["ISBN:0028623819","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolic process","termid":"GO:0005991"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"trehalose biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRESYN-PWY","MetaCyc:PWY-2622","MetaCyc:PWY-5985","MetaCyc:PWY-881","MetaCyc:PWY-5983","MetaCyc:TREHALOSESYN-PWY","MetaCyc:PWY-2661"],"synonyms":[{"name":"mycose biosynthesis","type":"exact"},{"name":"mycose biosynthetic process","type":"exact"},{"name":"mykose biosynthesis","type":"exact"},{"name":"mykose biosynthetic process","type":"exact"},{"name":"trehalose anabolism","type":"exact"},{"name":"trehalose biosynthesis","type":"exact"},{"name":"trehalose formation","type":"exact"},{"name":"trehalose synthesis","type":"exact"}],"termid":"GO:0005992","terms_by_termid":{"GO:0005992":null}}


id: PBO:0053767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1012","termid":"PBO:0053767"}


id: GO:0048006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["PMID:10375559","PMID:15928680","GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation, endogenous lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, endogenous lipid antigen","type":"exact"},{"name":"endogenous lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048006"}


id: GO:0018859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-hydroxybenzoate + CoA = AMP + diphosphate + 4-hydroxybenzoyl-CoA.","definition_xrefs":["EC:6.2.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate-CoA ligase activity","secondary_identifiers":["RHEA:23116","UM-BBD_reactionID:r0156","KEGG_REACTION:R01300","MetaCyc:4-HYDROXYBENZOATE--COA-LIGASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoate-CoA synthetase activity","type":"related"},{"name":"4-hydroxybenzoate-coenzyme A ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoyl coenzyme A synthetase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA ligase activity","type":"related"}],"termid":"GO:0018859"}


id: FYPO:0005710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome, followed by cell cycle arrest.","definition_xrefs":["PMID:7774573","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete re-replication, with mitotic cell cycle arrest","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with cell cycle arrest, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest with replicated DNA","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation resulting in complete rereplication, with mitotic cell cycle arrest","type":"exact"}],"termid":"FYPO:0005710"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: PBO:0061748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: SOFP:Gap
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 Gap cigar string","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gap","termid":"SOFP:Gap"}


id: PBO:0084069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in regulation of cell proliferation; localized to the plasma membrane; activated by increased levels of glycolysis intermediate fructose-1,6-bisphosphate; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication","termid":"PBO:0084069"}


id: GO:0047614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-aconitate = cis-aconitate.","definition_xrefs":["RHEA:17265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aconitate delta-isomerase activity","secondary_identifiers":["EC:5.3.3.7","KEGG_REACTION:R02244","MetaCyc:ACONITATE-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"aconitate D-isomerase activity","type":"exact"},{"name":"aconitate delta2-delta3-isomerase activity","type":"related"},{"name":"aconitate isomerase activity","type":"broad"}],"termid":"GO:0047614"}


id: GO:0047524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-alpha-hydroxysteroid = 16-beta-hydroxysteroid.","definition_xrefs":["EC:5.1.99.2","MetaCyc:16-HYDROXYSTEROID-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"16-hydroxysteroid epimerase activity","secondary_identifiers":["RHEA:15829"],"synonyms":[{"name":"16-hydroxysteroid 16-epimerase activity","type":"related"}],"termid":"GO:0047524"}


id: PBO:0004716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32 (predicted)","termid":"PBO:0004716"}


id: GO:0140749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phlorizin + H2O = beta-D-glucose + phloretin.","definition_xrefs":["RHEA:69639","PMID:9762914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"phlorizin hydrolase activity","termid":"GO:0140749"}


id: GO:0106312
data:
  {"annotated_genes":["SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94510],"is_not":false,"summary":null,"term":"GO:0106312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADH + H+.","definition_xrefs":["RHEA:19821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-22438","EC:1.5.1.54"],"termid":"GO:0106312","terms_by_termid":{"GO:0106312":null}}


id: PBO:0004444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2 family protein (predicted)","termid":"PBO:0004444"}


id: PBO:0043379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 9","termid":"PBO:0043379"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: GO:0106083
data:
  {"annotated_genes":["SJAG_01538","SJAG_05196","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92811,98889,108900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[98897,92814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the nuclear membrane.","definition_xrefs":["PMID:28356353","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear membrane protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106083","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: PBO:0031410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_vegetative_cell","termid":"PBO:0031410"}


id: GO:0016156
data:
  {"annotated_genes":["SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86299],"is_not":false,"summary":null,"term":"GO:0016156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + succinate = fumarate + H+ + NADH.","definition_xrefs":["RHEA:18281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase activity","termid":"GO:0000104"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fumarate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FUMARATE-REDUCTASE-NADH-RXN","KEGG_REACTION:R00402","EC:1.3.1.6"],"synonyms":[{"name":"NADH-dependent fumarate reductase activity","type":"related"}],"termid":"GO:0016156","terms_by_termid":{"GO:0016156":null}}


id: PR:Q09799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KRI1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00289","PANTHER:PTHR14490:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kri1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.05","secondary_identifiers":["UniProtKB:Q09799"],"synonyms":[{"name":"Spom972h-KRI1","type":"exact"}],"termid":"PR:Q09799"}


id: PBO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.3.1.71","termid":"PBO:0002710"}


id: FYPO:0007665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, and contains one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"viable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"viable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable with septation in the absence of nuclear division","type":"related"},{"name":"viable with septation independent of mitosis","type":"related"},{"name":"viable with septation without nuclear division","type":"related"}],"termid":"FYPO:0007665"}


id: PBO:0087616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus; required for replication slow zone (RSZ) breakage following Mec1p inactivation","termid":"PBO:0087616"}


id: PBO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 6","termid":"PBO:0045095"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["GOC:jc","CL:0000573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: PBO:0040272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 1","termid":"PBO:0040272"}


id: FYPO:0006649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which 5'-3' DNA/RNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 5'-3' DNA/RNA helicase activity","termid":"FYPO:0006647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished 5'-3' DNA/RNA helicase activity","synonyms":[{"name":"5'-3' DNA/RNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0006649"}


id: PBO:0084533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs","termid":"PBO:0084533"}


id: PBO:0057919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622a","termid":"PBO:0057919"}


id: GO:0085014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into a dormant state of the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy entry of symbiont in host","termid":"GO:0085014"}


id: PBO:0034484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_cohesin_loading","termid":"PBO:0034484"}


id: PBO:0055969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 1 pseudogene 1","termid":"PBO:0055969"}


id: PBO:0049328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 2","termid":"PBO:0049328"}


id: PBO:0081050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 8","termid":"PBO:0081050"}


id: PBO:0005667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Spc19","termid":"PBO:0005667"}


id: PBO:0087446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit I of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits; number of introns in different strains varies from 2 to 8, with most strains having 4-6 introns","termid":"PBO:0087446"}


id: GO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators","EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exo-alpha-sialidase activity","termid":"GO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"exo-alpha-(2->3)-sialidase activity","synonyms":[{"name":"exo-alpha-(2,3)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,3-sialidase activity","type":"exact"}],"termid":"GO:0052794"}


id: PBO:0080999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 37","termid":"PBO:0080999"}


id: GO:0019606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"2-oxobutyrate metabolic process","termid":"GO:0046361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"2-oxobutyrate catabolic process","secondary_identifiers":["MetaCyc:2OXOBUTYRATECAT-PWY"],"synonyms":[{"name":"2-oxobutyrate breakdown","type":"exact"},{"name":"2-oxobutyrate catabolism","type":"exact"},{"name":"2-oxobutyrate degradation","type":"exact"},{"name":"alpha-ketobutyrate catabolic process","type":"exact"},{"name":"alpha-ketobutyrate catabolism","type":"exact"}],"termid":"GO:0019606"}


id: PBO:0066441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 2","termid":"PBO:0066441"}


id: PBO:0058446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5011","termid":"PBO:0058446"}


id: PBO:0061034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar pre-rRNA processing protein NIP7","termid":"PBO:0061034"}


id: PBO:0027213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_nucleotide_metabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027213"}


id: PBO:0028868
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snoRNA_level","termid":"PBO:0028868"}


id: GO:0000228
data:
  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id: PBO:0111814
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id: GO:0006487
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id: FYPO:0007946
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id: PBO:0047878
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id: PR:O14021
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id: PBO:0050475
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id: PBO:0062229
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id: PBO:0043449
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id: GO:2000360
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id: PBO:0063922
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id: PBO:0056088
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id: MOD:00384
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id: GO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a copper-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"copper incorporation into copper-sulfur cluster","synonyms":[{"name":"copper incorporation into copper-sulphur cluster","type":"exact"}],"termid":"GO:0018428"}


id: PBO:0087402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stretch-activated Ca2+-permeable cation channel; required for Ca2+ influx stimulated by mating pheromones and some abiotic stresses; sensor of compressive mechanical stress; N-glycosylated membrane protein of the ER and plasma membrane; interacts with Cch1p; oligomerizes; is an alpha2/delta-like protein and participates in the generation of stretch-activated Ca2+-permeable cation channel activity when expressed in mammalian cells","termid":"PBO:0087402"}


id: PBO:0087629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Dcp1p-Dcp2p decapping enzyme complex; decapping complex removes the 5' cap structure from mRNAs prior to their degradation; enhances the activity of catalytic subunit Dcp2p; regulated by DEAD box protein Dhh1p; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0087629"}


id: GO:0098689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virus switches on its replication cycle in an infected cell. The process is typically controlled by a genetic switch controlled by environmental factors such as cell type, cell shape, the availability of nutrients, superinfection or exposure of infected cells to UV or various chemical stimuli.","definition_xrefs":["PMID:24339346","VZ:3964","PMID:19416825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"regulates","term_name":"release from viral latency","termid":"GO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"latency-replication decision","synonyms":[{"name":"Latency-replication switch","type":"exact"},{"name":"lytic switch","type":"exact"},{"name":"prophage induction","type":"narrow"},{"name":"proviral induction","type":"exact"},{"name":"proviral switch","type":"exact"},{"name":"reactivation of latent virus","type":"exact"}],"termid":"GO:0098689"}


id: GO:0009037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of new phosphodiester bonds between a pair of short, unique DNA target sequences; occurs through a phosphotyrosyl intermediate in which the target sequence is first cleaved by the nucleophilic attack by a tyrosine in the active site.","definition_xrefs":["PMID:11090626","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tyrosine-based site-specific recombinase activity","synonyms":[{"name":"site-specific tyrosine recombinase activity","type":"exact"},{"name":"tyrosine recombinase","type":"broad"}],"termid":"GO:0009037"}


id: FYPO:0000340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene does not provide sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"haploinsufficient","synonyms":[{"name":"haploinsufficient during mitotic cell cycle","type":"related"},{"name":"haploinsufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000340"}


id: GO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mesonephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in mesonephros development","synonyms":[{"name":"cell-cell signalling involved in mesonephros development","type":"exact"}],"termid":"GO:0061210"}


id: PR:Q9HDZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiomorpholine-carboxylate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00761","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P11E10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.01","secondary_identifiers":["UniProtKB:Q9HDZ0"],"synonyms":[{"name":"Spom972h-CRYM","type":"exact"}],"termid":"PR:Q9HDZ0"}


id: GO:0070566
data:
  {"annotated_genes":["SJAG_02889","SJAG_02383","SJAG_02720","SJAG_02370","SJAG_01704","SJAG_03475","SJAG_05277","SJAG_02725","SJAG_01937","SJAG_01500","SJAG_01176","SJAG_00797","SJAG_04946","SJAG_03257","SJAG_02288","SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070733"},{"annotations":[69387,113953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052929"},{"annotations":[110177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003919"},{"annotations":[96144,95428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000309"},{"annotations":[96145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004515"},{"annotations":[88323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004595"},{"annotations":[96174,84533,67985,92349,99913,114008,107363,87770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990817"},{"annotations":[103586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004781"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an adenylyl group to an acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_01500":null,"SJAG_01704":null,"SJAG_01937":null,"SJAG_02288":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_02889":null,"SJAG_03257":null,"SJAG_03475":null,"SJAG_03896":null,"SJAG_04946":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070566","terms_by_termid":{"GO:0000309":null,"GO:0003919":null,"GO:0004515":null,"GO:0004595":null,"GO:0004781":null,"GO:0052929":null,"GO:0070733":null,"GO:1990817":null}}


id: PBO:0039479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A2, pseudogene","termid":"PBO:0039479"}


id: GO:0045209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Leptomycin B-sensitive movement of a MAPK phosphatase from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase export from nucleus, leptomycin B sensitive (obsolete GO:0045209)","synonyms":[{"name":"MAPK phosphatase export from cell nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase export out of nucleus, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase transport from nucleus to cytoplasm, leptomycin B sensitive","type":"exact"},{"name":"MAPK phosphatase-nucleus export, leptomycin B sensitive","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase export out of nucleus","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase transport from nucleus to cytoplasm","type":"exact"},{"name":"leptomycin B-sensitive MAPK phosphatase-nucleus export","type":"exact"}],"termid":"GO:0045209"}


id: PBO:0059589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 1","termid":"PBO:0059589"}


id: PBO:0059002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMACHC pseudogene 1","termid":"PBO:0059002"}


id: PBO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Ucp14","termid":"PBO:0001923"}


id: GO:0090472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"dibasic protein processing","termid":"GO:0090472"}


id: PBO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_histone_H3_in_cell","termid":"PBO:0032703"}


id: PBO:0042455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 small effector 1","termid":"PBO:0042455"}


id: PBO:0056079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member K","termid":"PBO:0056079"}


id: GO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(alpha-D-mannosyl)-beta-D-mannosyl-R + UDP-N-acetyl-alpha-D-glucosamine = 3-(2-[N-acetyl-beta-D-glucosaminyl]-alpha-D-mannosyl)-beta-D-mannosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.101","RHEA:11456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.101-RXN","Reactome:R-HSA-964768","KEGG_REACTION:R05983"],"synonyms":[{"name":"GNTI activity","type":"related"},{"name":"GnTI","type":"related"},{"name":"N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-1,3-D-mannoside-beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003827"}


id: PBO:0043602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 11","termid":"PBO:0043602"}


id: GO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of host cell (obsolete GO:0044385)","termid":"GO:0044385"}


id: PBO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase pseudogene","termid":"PBO:0060538"}


id: GO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrate","termid":"GO:0010167"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to reactive nitrogen species","termid":"GO:1902170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrate","termid":"GO:0071249"}


id: PBO:0056648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 9","termid":"PBO:0056648"}


id: RO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"is member of is a mereological relation between a item and a collection.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"RO:0002350"}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: PBO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 2","termid":"PBO:0050933"}


id: GO:0050156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine + 2 benzoyl-CoA = N(2),N(5)-dibenzoyl-L-ornithine + 2 CoA + 2 H+.","definition_xrefs":["EC:2.3.1.127","RHEA:16929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"ornithine N-benzoyltransferase activity","secondary_identifiers":["MetaCyc:ORNITHINE-N-BENZOYLTRANSFERASE-RXN","KEGG_REACTION:R00664"],"synonyms":[{"name":"benzoyl-CoA:L-ornithine N-benzoyltransferase activity","type":"related"},{"name":"ornithine N-acyltransferase activity","type":"related"}],"termid":"GO:0050156"}


id: PBO:0068216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 523","termid":"PBO:0068216"}


id: GO:0039627
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=147 symmetry. T=147 icosahedral capsid is composed of 12 pentameric and 1460 hexameric capsomeres for a total of 8820 capsid proteins.","definition_xrefs":["GOC:plm","UniProtKB-KW:KW-0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=147 icosahedral capsid","termid":"GO:0039627"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: GO:0031376
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in the cytosol.","definition_xrefs":["ISBN:0716720094","PMID:12957385","GOC:mah","ISBN:0471331309"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic type II fatty acid synthase complex (obsolete GO:0031376)","synonyms":[{"name":"cytosolic type II FAS complex","type":"exact"},{"name":"cytosolic type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031376"}


id: GO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of insulin, glucagon and other polypeptides. No action on proteins.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insulysin activity (obsolete GO:0004231)","synonyms":[{"name":"IDE","type":"related"},{"name":"insulin protease activity","type":"related"},{"name":"insulin proteinase activity","type":"related"},{"name":"insulin-degrading enzyme activity","type":"related"},{"name":"insulin-degrading neutral proteinase activity","type":"related"},{"name":"insulin-glucagon protease activity","type":"related"},{"name":"insulin-specific protease activity","type":"related"},{"name":"insulinase activity","type":"related"},{"name":"insulysin activity","type":"exact"},{"name":"metalloinsulinase activity","type":"related"}],"termid":"GO:0004231"}


id: PBO:0089221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L5","termid":"PBO:0089221"}


id: PBO:0079501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNL4A pseudogene 1","termid":"PBO:0079501"}


id: PBO:0058630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6762","termid":"PBO:0058630"}


id: PBO:0070707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 12","termid":"PBO:0070707"}


id: PBO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1 (predicted)","termid":"PBO:0002223"}


id: GO:0004419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetoacetate + acetyl-CoA.","definition_xrefs":["RHEA:24404","EC:4.1.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA lyase activity","secondary_identifiers":["Reactome:R-HSA-6788597","KEGG_REACTION:R01360","Reactome:R-HSA-74180","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetate-lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutarate-CoA lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA cleaving enzyme","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A lyase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase activity","type":"related"},{"name":"HMG-CoA lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A lyase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-cleaving enzyme","type":"related"}],"termid":"GO:0004419"}


id: GO:0036266
data:
  {"annotated_genes":["SJAG_00948","SJAG_03345","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85381,100876,111818],"is_not":false,"summary":null,"term":"GO:0036266"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex involved in the release of polyubiquitinated proteins, including those damaged by oxidative stress, from the outer mitochondria membrane into the cytoplasm where they are presented to the proteasome for proteolysis, a process also referred to as mitochondria-associated degradation (MAD). In budding yeast, this complex includes Cdc48p, Npl4p and Vms1p.","definition_xrefs":["PMID:21070972","GOC:rn","PMID:21936843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Vms1p complex","type":"exact"},{"name":"Vms1-Cdc48-Npl4 complex","type":"exact"},{"name":"Vms1p-Cdc48p-Npl4p complex","type":"exact"}],"termid":"GO:0036266","terms_by_termid":{"GO:0036266":null}}


id: GO:0008954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan synthetase activity (obsolete GO:0008954)","synonyms":[{"name":"peptidoglycan synthetase activity","type":"exact"}],"termid":"GO:0008954"}


id: FYPO:0003731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on galactose carbon source","synonyms":[{"name":"normal cell population growth on galactose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0003731"}


id: PATO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased size","secondary_identifiers":["PATO:0001202"],"synonyms":[{"name":"big","type":"related"},{"name":"enlarged","type":"related"},{"name":"expanded","type":"related"},{"name":"great","type":"related"},{"name":"large","type":"related"}],"termid":"PATO:0000586"}


id: PR:O14254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NADP], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11822:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NADP], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.08","secondary_identifiers":["UniProtKB:O14254"],"synonyms":[{"name":"IDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IDP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC6G10.08","type":"related"},{"name":"Spom972h-IDH2nadp","type":"exact"},{"name":"oxalosuccinate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14254"}


id: PBO:0005834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp9 (predicted)","termid":"PBO:0005834"}


id: GO:0007590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the fat body. A fat body is a fat-containing cellular structure which serves as an energy reserve. As in, but not restricted to, the true insects (Insecta, ncbi_taxonomy_id:50557).","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete fat body metabolic process (sensu Insecta) (obsolete GO:0007590)","synonyms":[{"name":"fat body metabolic process (sensu Insecta)","type":"exact"}],"termid":"GO:0007590"}


id: PBO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural cell adhesion molecule 2","termid":"PBO:0060594"}


id: PBO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_target_sequence_feature_(obsolete_requires_target_sequence_feature)","termid":"PBO:0034403"}


id: PR:O13867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil phosphoribosyltransferase Upp that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.01c","secondary_identifiers":["UniProtKB:O13867"],"synonyms":[{"name":"Spom972h-upp","type":"exact"},{"name":"UMP pyrophosphorylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13867"}


