# terms

id: GO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"positively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"positive regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090100"}


id: PBO:0079767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fold modifier 1","termid":"PBO:0079767"}


id: FYPO:0001228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in vegetative growth phase of the life cycle, in which the amount of protein measured in the cell nucleus is higher than normal during a cellular response to hydrogen peroxide. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear protein level during vegetative growth","termid":"FYPO:0000255"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"increased nuclear protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased nuclear protein level during cellular response to H2O2","type":"exact"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level in nucleus during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear accumulation of protein during cellular response to hydrogen peroxide","type":"exact"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide during vegetative growth","type":"related"},{"name":"nuclear protein accumulation in response to hydrogen peroxide","type":"related"}],"termid":"FYPO:0001228"}


id: PBO:0072816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 11","termid":"PBO:0072816"}


id: PBO:0061137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME2 pseudogene 1","termid":"PBO:0061137"}


id: GO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"leukotriene transport","termid":"GO:0071716"}


id: GO:1905268
data:
  {"annotated_genes":["SJAG_04369","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[104556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:TermGenie","GOC:pr","GO_REF:0000058","GOC:vw","PMID:654321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"negatively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903309","GO:0045798"],"synonyms":[{"name":"down regulation of chromatin assembly or disassembly","type":"related"},{"name":"down regulation of chromatin organisation","type":"exact"},{"name":"down regulation of chromatin organization","type":"exact"},{"name":"down regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"down-regulation of chromatin assembly or disassembly","type":"related"},{"name":"down-regulation of chromatin organisation","type":"exact"},{"name":"down-regulation of chromatin organization","type":"exact"},{"name":"down-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"downregulation of chromatin assembly or disassembly","type":"related"},{"name":"downregulation of chromatin organisation","type":"exact"},{"name":"downregulation of chromatin organization","type":"exact"},{"name":"downregulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"inhibition of chromatin assembly or disassembly","type":"narrow"},{"name":"inhibition of chromatin organisation","type":"narrow"},{"name":"inhibition of chromatin organization","type":"narrow"},{"name":"inhibition of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"negative regulation of chromatin assembly or disassembly","type":"related"},{"name":"negative regulation of chromatin assembly/disassembly","type":"exact"},{"name":"negative regulation of chromatin modification","type":"related"},{"name":"negative regulation of chromatin organisation","type":"exact"},{"name":"negative regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905268","terms_by_termid":{"GO:0060906":null,"GO:0061188":null}}


id: PBO:0003687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate adenylyltransferase","termid":"PBO:0003687"}


id: PBO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 2 pseudogene 1","termid":"PBO:0043840"}


id: PBO:0029988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_glycosylation","termid":"PBO:0029988"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["UniProtKB:O60117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: PBO:0057563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 758","termid":"PBO:0057563"}


id: PBO:0039264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 9 family member A1","termid":"PBO:0039264"}


id: GO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the extensively base paired small nuclear RNAs U4atac and U6atac, a heptameric ring of Sm proteins associated with U4atac, the Lsm2-8 heptameric ring complex associated with U6atac, as well as several proteins that are unique to the U4atac snRNP or U6atac snRNPs, some of which remain associated with the U4atac/U6atac snRNA both while the U4atac snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["PMID:14685174","ISBN:0879695897","GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U4atac/U6atac snRNP","termid":"GO:0071002"}


id: PBO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad4","termid":"PBO:0004769"}


id: PBO:0083941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl cyclotransferase; cleaves the gamma-glutamyl bond of glutathione to yield 5-oxoproline and a Cys-Gly dipeptide; similar to mammalian pro-apoptotic protein ChaC1; expression of mouse ChaC1 in yeast increases apoptosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; periodically expressed during the metabolic cycle","termid":"PBO:0083941"}


id: GO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).","definition_xrefs":["EC:7.6.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type polyamine transporter activity","termid":"GO:0015417"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type putrescine transporter activity","secondary_identifiers":["RHEA:29995","EC:7.6.2.16","MetaCyc:ABC-25-RXN"],"synonyms":[{"name":"ATPase-coupled putrescine transmembrane transporter activity","type":"related"},{"name":"putrescine porter activity","type":"broad"},{"name":"putrescine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015594"}


id: GO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP metabolic process (obsolete GO:0030823)","synonyms":[{"name":"regulation of cGMP metabolism","type":"exact"}],"termid":"GO:0030823"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: PBO:0029857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell","termid":"PBO:0029857"}


id: GO:0004664
data:
  {"annotated_genes":["SJAG_03124"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104677],"is_not":false,"summary":null,"term":"GO:0004664"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: prephenate = phenylpyruvate + H2O + CO2.","definition_xrefs":["EC:4.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03124":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prephenate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PREPHENATEDEHYDRAT-RXN","RHEA:21648"],"synonyms":[{"name":"prephenate hydro-lyase (decarboxylating)","type":"related"},{"name":"prephenate hydro-lyase (decarboxylating; phenylpyruvate-forming)","type":"related"}],"termid":"GO:0004664","terms_by_termid":{"GO:0004664":null}}


id: PBO:0071240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 81","termid":"PBO:0071240"}


id: FYPO:0000607
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115575,115576,115574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through M phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":5,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal mitotic M phase progression","references_by_uniquename":{"PMID:23786411":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_04284","SJAG_01956"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal M phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic M phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in M","type":"exact"},{"name":"mitotic cell cycle progression in M phase: abnormal","type":"related"}],"termid":"FYPO:0000607","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: PBO:0048519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 2","termid":"PBO:0048519"}


id: SO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specialized region in the genomes of some yeast and fungi, the genes of which regulate mating type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Mating-type_region"],"synonyms":[{"name":"mating type region","type":"exact"}],"termid":"SO:0001789"}


id: PBO:0078217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 8-1 (pseudogene)","termid":"PBO:0078217"}


id: PBO:0011078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Req family helicase","termid":"PBO:0011078"}


id: GO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a zoospore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete zoospore movement on or near host (obsolete GO:0075234)","synonyms":[{"name":"zoospore motility on or near host","type":"exact"}],"termid":"GO:0075234"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-isomenthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["MetaCyc:RXN-5164","EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(+)-pulegone reductase, (+)-isomenthone as substrate, activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: SO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a vaultRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaultRNA_primary_transcript","synonyms":[{"name":"vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002040"}


id: FYPO:0004177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h- mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h- cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h- cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h- cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h- cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h- cells","type":"exact"}],"termid":"FYPO:0004177"}


id: GO:1901839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of RNA polymerase I regulatory region sequence-specific DNA binding","termid":"GO:1901839"}


id: PBO:0082357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in meiosis I, and kinetochore release from SPB clusters at meiotic exit; helps maintain condensed chromosomes during anaphase; required for SPB cohesion and prevention of multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; required for inhibition of karyopherin Pse1p upon SAC arrest","termid":"PBO:0082357"}


id: GO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoribonuclease activity","termid":"GO:0060699"},{"relation_name":"is_a","term_name":"negative regulation of ribonuclease activity","termid":"GO:0060701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoribonuclease activity","termid":"GO:0060702"}


id: GO:0023057
data:
  {"annotated_genes":["SJAG_02481","SJAG_00642","SJAG_04522","SJAG_01679","SJAG_03799","SJAG_01297","SJAG_04455","SJAG_00209","SJAG_03592","SJAG_01114","SJAG_02336","SJAG_02379","SJAG_00293","SJAG_03072","SJAG_00169","SJAG_03508","SJAG_04825","SJAG_00526","SJAG_00229","SJAG_00991","SJAG_04943","SJAG_01386","SJAG_04551","SJAG_01253","SJAG_03678","SJAG_00289","SJAG_02514","SJAG_01142","SJAG_00883","SJAG_02451","SJAG_02000","SJAG_01184","SJAG_00457","SJAG_03486","SJAG_03353","SJAG_04259","SJAG_03893","SJAG_03501","SJAG_00824","SJAG_02858","SJAG_01983","SJAG_03263","SJAG_04206","SJAG_01245","SJAG_02426","SJAG_02013","SJAG_03681","SJAG_01790","SJAG_03720","SJAG_06270","SJAG_02231","SJAG_02169","SJAG_02311","SJAG_05000","SJAG_03185","SJAG_04249","SJAG_00975","SJAG_02233","SJAG_00990","SJAG_02765","SJAG_00266","SJAG_00424","SJAG_04910","SJAG_03355","SJAG_00875","SJAG_02392","SJAG_03126","SJAG_03089","SJAG_00610","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95669,86843,99975,109851,108022,110330,111957,103298,104320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[112441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[104037,112442,96519,88846,88189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[112189,97071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[91952,103680,103111,95524,114331,99888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[98224,85567,98925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[84358,103200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[90299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[87759,92076,95526,91135,113123,114332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[103201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[89414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[107425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[86847,103300,103610,88936,89018,97351,101096,87828,89558,111960,95670,106240,91746,95750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[87344,101953,107775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[94962,112190,103466,110047,112294,113091,114245,84175,105333,89420,99093,103214,107022,90272,92200,97526,109225,112541,101190,95653,105747,110635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[112333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a signaling process.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"signaling","termid":"GO:0023052"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00229":null,"SJAG_00266":null,"SJAG_00289":null,"SJAG_00293":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00526":null,"SJAG_00610":null,"SJAG_00642":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00883":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01114":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01253":null,"SJAG_01297":null,"SJAG_01386":null,"SJAG_01679":null,"SJAG_01790":null,"SJAG_01983":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02169":null,"SJAG_02231":null,"SJAG_02233":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02426":null,"SJAG_02451":null,"SJAG_02481":null,"SJAG_02514":null,"SJAG_02765":null,"SJAG_02858":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03353":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03678":null,"SJAG_03681":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03893":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04259":null,"SJAG_04455":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_04910":null,"SJAG_04943":null,"SJAG_05000":null,"SJAG_05346":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of signaling process","type":"related"},{"name":"negative regulation of signalling process","type":"related"}],"termid":"GO:0023057","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0043409":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0106072":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 1","termid":"PBO:0039004"}


id: PBO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 224, pseudogene","termid":"PBO:0052831"}


id: GO:0009405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogenesis (obsolete GO:0009405)","synonyms":[{"name":"virulence","type":"related"}],"termid":"GO:0009405"}


id: PBO:0055281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2708","termid":"PBO:0055281"}


id: GO:1903115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament-based movement.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament-based movement","termid":"GO:1903115"}


id: FYPO:0006448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein from the Golgi apparatus to the cleavage furrow ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow","synonyms":[{"name":"decreased rate of protein localisation from Golgi apparatus to cleavage furrow","type":"exact"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced rate of protein localization from Golgi apparatus to cleavage furrow","type":"exact"}],"termid":"FYPO:0006448"}


id: PBO:0039442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKH divergent transcript","termid":"PBO:0039442"}


id: PBO:0089096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane acetate transmembrane transporter","termid":"PBO:0089096"}


id: PBO:0085713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds1p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0085713"}


id: GO:0097174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["PMID:15901686","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097174"}


id: GO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when glycine is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005237"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"extracellularly glycine-gated ion channel activity","termid":"GO:0016933"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"extracellularly glycine-gated chloride channel activity","secondary_identifiers":["Reactome:R-HSA-975389","GO:0004891"],"synonyms":[{"name":"extracellular-glycine-gated chloride channel activity","type":"exact"},{"name":"glycine receptor","type":"broad"},{"name":"glycine-inhibited chloride channel activity","type":"related"}],"termid":"GO:0016934"}


id: GO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-O-(beta-D-glucosyl)-sn-glycerol 3-phosphate + H2O = 2-O-(beta-D-glucosyl)-sn-glycerol + phosphate.","definition_xrefs":["EC:3.1.3.69","RHEA:22652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glucosylglycerol 3-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R05791","MetaCyc:3.1.3.69-RXN"],"synonyms":[{"name":"2-(beta-D-glucosyl)-sn-glycerol-3-phosphate phosphohydrolase activity","type":"related"},{"name":"StpA","type":"related"},{"name":"salt tolerance protein A","type":"related"}],"termid":"GO:0050530"}


id: GO:0060699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endoribonuclease activity","termid":"GO:0060699"}


id: GO:1904598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing connective tissue replacement, which may be replaced with fibrotic material, that occurs as part of an inflammatory response.","definition_xrefs":["GOC:TermGenie","PMID:18245812","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of connective tissue replacement involved in inflammatory response wound healing","termid":"GO:1904596"},{"relation_name":"is_a","term_name":"positive regulation of connective tissue replacement","termid":"GO:1905205"},{"relation_name":"positively_regulates","term_name":"connective tissue replacement involved in inflammatory response wound healing","termid":"GO:0002248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"activation of connective tissue replacement during inflammatory response","type":"related"},{"name":"activation of connective tissue replacement involved in inflammatory response wound healing","type":"narrow"},{"name":"activation of fibrosis during inflammatory response","type":"narrow"},{"name":"positive regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"positive regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"up-regulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"up-regulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"up-regulation of fibrosis during inflammatory response","type":"narrow"},{"name":"upregulation of connective tissue replacement during inflammatory response","type":"related"},{"name":"upregulation of connective tissue replacement involved in inflammatory response wound healing","type":"exact"},{"name":"upregulation of fibrosis during inflammatory response","type":"narrow"}],"termid":"GO:1904598"}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","GOC:TermGenie","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: PBO:0071618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 36","termid":"PBO:0071618"}


id: GO:1904493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tetrahydrofolyl-poly(glutamate) polymer.","definition_xrefs":["GO_REF:0000067","GOC:hal","GOC:TermGenie","GOC:BHF","PMID:24863754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrahydrofolyl-poly(glutamate) polymer binding","termid":"GO:1904493"}


id: FYECO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing galactose (typically <2% w/v), salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose MM","termid":"FYECO:0000289"}


id: PBO:0085951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is defective in unfolded protein response; possibly involved in a membrane regulation metabolic pathway; member of the PhzF superfamily, though most likely not involved in phenazine production","termid":"PBO:0085951"}


id: PBO:0040491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 8","termid":"PBO:0040491"}


id: PBO:0086992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for splicing of the group I intron bI5 of the COB pre-mRNA; nuclear-encoded mitochondrial protein that binds to the RNA to promote splicing; also involved in but not essential for splicing of the COB bI2 intron and the intron in the 21S rRNA gene","termid":"PBO:0086992"}


id: PR:Q9US60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.07","synonyms":[{"name":"Spom972h-klp3","type":"exact"},{"name":"kinesin-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US60"}


id: PBO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD244 molecule","termid":"PBO:0042380"}


id: GO:0007155
data:
  {"annotated_genes":["SJAG_01253","SJAG_00910","SJAG_02380","SJAG_04191","SJAG_03802","SJAG_01778","SJAG_00239","SJAG_00926","SJAG_04723","SJAG_03473","SJAG_01975","SJAG_04720","SJAG_03484","SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97146,102921],"is_not":false,"summary":null,"term":"GO:0007155"},{"annotations":[99055,97725,97724,99054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098609"},{"annotations":[88594,112016,98799,96884,88593,96885,112015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[99637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[94669,95377],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[102312,99638],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[104700],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045785"},{"annotations":[110148,101954,104701,104824,107435,112204],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.","definition_xrefs":["GOC:pf","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098602","Wikipedia:Cell_adhesion"],"synonyms":[{"name":"cell adhesion molecule activity","type":"related"},{"name":"single organism cell adhesion","type":"related"}],"termid":"GO:0007155","terms_by_termid":{"GO:0000128":null,"GO:0007155":null,"GO:0022408":null,"GO:0036349":null,"GO:0045785":null,"GO:0060257":null,"GO:0098609":null,"GO:1900735":null}}


id: GO:0002921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response","synonyms":[{"name":"down regulation of humoral immune response","type":"exact"},{"name":"down-regulation of humoral immune response","type":"exact"},{"name":"downregulation of humoral immune response","type":"exact"},{"name":"inhibition of humoral immune response","type":"narrow"}],"termid":"GO:0002921"}


id: PBO:0070215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 147 pseudogene","termid":"PBO:0070215"}


id: PBO:0079219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tau tubulin kinase 1","termid":"PBO:0079219"}


id: GO:2000771
data:
  {"annotated_genes":["SJAG_04522","SJAG_01799","SJAG_00661","SJAG_02536","SJAG_00845","SJAG_04461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103682,112643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[89841,99785,101416,96254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"positively_regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02536":null,"SJAG_04461":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000771","terms_by_termid":{"GO:2000247":null,"GO:2000784":null}}


id: PBO:0029915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_FPP_level","termid":"PBO:0029915"}


id: PBO:0080741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 intronic transcript 1","termid":"PBO:0080741"}


id: PBO:0092023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Proline (ugg), mitochondrial","termid":"PBO:0092023"}


id: PR:O13713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear polyadenylated RNA-binding protein nab2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.06c","synonyms":[{"name":"Spom972h-nab2","type":"exact"}],"termid":"PR:O13713"}


id: GO:0052112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism reduces the flow of fluid within the host xylem, the tissue in plants that carries water and nutrients up from the roots to the shoot and leaves. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28871268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated occlusion of host xylem","synonyms":[{"name":"occlusion by symbiont of host xylem","type":"exact"}],"termid":"GO:0052112"}


id: GO:0032209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"},{"relation_name":"is_a","term_name":"positive regulation of mitotic recombination","termid":"GO:0045951"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination at telomere","termid":"GO:0072696"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via recombination","synonyms":[{"name":"activation of telomere maintenance via recombination","type":"narrow"},{"name":"stimulation of telomere maintenance via recombination","type":"narrow"},{"name":"up regulation of telomere maintenance via recombination","type":"exact"},{"name":"up-regulation of telomere maintenance via recombination","type":"exact"},{"name":"upregulation of telomere maintenance via recombination","type":"exact"}],"termid":"GO:0032209"}


id: PBO:0111334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Cic1/Utp30 family involved in ribosome biogenesis","termid":"PBO:0111334"}


id: PBO:0091135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein with 2 predicted transmembrane domains","termid":"PBO:0091135"}


id: PBO:0012280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex FHA domain subunit Far10/Csc1","termid":"PBO:0012280"}


id: PBO:0078078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat and ankyrin repeat containing 1","termid":"PBO:0078078"}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: PBO:0081813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 6, Y-linked","termid":"PBO:0081813"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: PBO:0034473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_saturation","termid":"PBO:0034473"}


id: GO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocopherol + O2 + NADPH + H+ = 13'-hydroxy-tocopherol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocopherol omega-hydroxylase activity (obsolete GO:0052870)","synonyms":[{"name":"tocopherol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052870"}


id: PBO:0074291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 6","termid":"PBO:0074291"}


id: GO:0038054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with estrogen and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:signaling","PMID:20960099","PMID:17379646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nuclear estrogen receptor activity","termid":"GO:0030284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0038023","GO:0140110","GO:0003674","GO:0003700"],"is_obsolete":false,"name":"G protein-coupled estrogen receptor activity","synonyms":[{"name":"G-protein coupled estrogen receptor activity","type":"exact"},{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0038054"}


id: PBO:0013446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase complex subunit Erf4","termid":"PBO:0013446"}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_01579","SJAG_03664","SJAG_00335","SJAG_03042","SJAG_03982","SJAG_04186","SJAG_03916","SJAG_02778","SJAG_00678","SJAG_01601","SJAG_03356","SJAG_00302","SJAG_03543","SJAG_04574","SJAG_03418","SJAG_03844","SJAG_03685"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87038,87375,88172,89930,95205,95641,98082,98083,98084,100169,100267,106550,108168,108272,108667,108668,108669,109355,111998,113780],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: GO:0006776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene.","definition_xrefs":["GOC:jl","PMID:1503811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"vitamin A metabolic process","synonyms":[{"name":"vitamin A metabolism","type":"exact"}],"termid":"GO:0006776"}


id: GO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine (position 9) = CoA + histone H2A N6-acetyl-L-lysine (position 9).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A acetyltransferase activity","termid":"GO:0043998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0034212","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H2AK9 acetyltransferase activity","synonyms":[{"name":"histone H2A-K9 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2A-K9 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2A-K9 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2A-K9 specific)","type":"exact"}],"termid":"GO:0044012"}


id: GO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"positively_regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 type immune response","synonyms":[{"name":"activation of T-helper 1 type immune response","type":"narrow"},{"name":"stimulation of T-helper 1 type immune response","type":"narrow"},{"name":"up regulation of T-helper 1 type immune response","type":"exact"},{"name":"up-regulation of T-helper 1 type immune response","type":"exact"},{"name":"upregulation of T-helper 1 type immune response","type":"exact"}],"termid":"GO:0002827"}


id: PBO:0047401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 39","termid":"PBO:0047401"}


id: GO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-6-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-6-mediated signaling pathway","termid":"GO:0070102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-6-mediated signaling pathway","synonyms":[{"name":"regulation of IL-6-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070103"}


id: GO:0071130
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to lipid phosphate phosphohydrolase-3.","definition_xrefs":["PMID:16099422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha5-beta1 integrin-LPP3 complex","synonyms":[{"name":"ITGA5-ITGB1-PPAP2B complex","type":"narrow"}],"termid":"GO:0071130"}


id: GO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate filament polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization","termid":"GO:0030839"},{"relation_name":"is_a","term_name":"positive regulation of protein polymerization","termid":"GO:0032273"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"positively_regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0065003"],"is_obsolete":false,"name":"positive regulation of intermediate filament polymerization","synonyms":[{"name":"activation of intermediate filament polymerization","type":"narrow"},{"name":"positive regulation of intermediate filament polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of intermediate filament polymerization","type":"narrow"},{"name":"up regulation of intermediate filament polymerization","type":"exact"},{"name":"up-regulation of intermediate filament polymerization","type":"exact"},{"name":"upregulation of intermediate filament polymerization","type":"exact"}],"termid":"GO:0030841"}


id: GO:0016503
data:
  {"annotated_genes":["SJAG_01978","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with a pheromone to initiate a change in cell activity. A pheromone is a substance used in olfactory communication between organisms of the same species eliciting a change in sexual or social behavior.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016503","terms_by_termid":{"GO:0004932":null,"GO:0036320":null}}


id: FYPO:0007938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tea tree oil. Cells stop growing (and may die) at a concentration of tea tree oil that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tea tree oil","termid":"FYPO:0007938"}


id: GO:1900328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mannotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of mannotriose transport","termid":"GO:1900327"},{"relation_name":"negatively_regulates","term_name":"mannotriose transport","termid":"GO:2001095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of mannotriose transport","synonyms":[{"name":"down regulation of mannotriose transport","type":"exact"},{"name":"down-regulation of mannotriose transport","type":"exact"},{"name":"downregulation of mannotriose transport","type":"exact"},{"name":"inhibition of mannotriose transport","type":"narrow"}],"termid":"GO:1900328"}


id: FYPO:0001024
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[115387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[115381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[115396],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype that affects or involves the normal or abnormal occurrence of cell cycle arrest. In cell cycle arrest, progression through the cell cycle is halted during one of the normal phases (G1, S, G2, or M).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"cell cycle arrest phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284","SJAG_04332","SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta"],"synonyms":[{"name":"fission yeast cell cycle arrest phenotype","type":"exact"}],"termid":"FYPO:0001024","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0054385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1781","termid":"PBO:0054385"}


id: PBO:0047904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(8)(q22.3)","termid":"PBO:0047904"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PBO:0051739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 6 pseudogene 1","termid":"PBO:0051739"}


id: PBO:0043285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member M","termid":"PBO:0043285"}


id: PATO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a cane.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cane-like","synonyms":[{"name":"cane-shaped","type":"related"}],"termid":"PATO:0002511"}


id: GO:0046444
data:
  {"annotated_genes":["SJAG_04845","SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110175],"is_not":false,"summary":null,"term":"GO:0046444"},{"annotations":[111780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving FMN, riboflavin 5'-(dihydrogen phosphate), a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["PMID:20822113","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01937":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"FMN metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FMN metabolism","type":"exact"}],"termid":"GO:0046444","terms_by_termid":{"GO:0009398":null,"GO:0046444":null}}


id: PBO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead associated phosphopeptide binding domain 1","termid":"PBO:0047596"}


id: PBO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase regulatory subunit gamma","termid":"PBO:0051509"}


id: MOD:01533
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01533"}


id: PBO:0077115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 23 homolog B","termid":"PBO:0077115"}


id: GO:0098737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a plasma membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.","definition_xrefs":["GOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into plasma membrane","termid":"GO:0098737"}


id: PR:O94307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03960","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.02","secondary_identifiers":["UniProtKB:O94307"],"synonyms":[{"name":"Spom972h-PFDN5","type":"exact"},{"name":"byr1-binding protein Bob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94307"}


id: PBO:0073690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 3","termid":"PBO:0073690"}


id: FYPO:0007981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the distribution of lengths of interpolar microtubules in the mitotic spindle is abnormal during anaphase B.","definition_xrefs":["PMID:15689489","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000120","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal interpolar microtubule length distribution during anaphase B","termid":"FYPO:0007981"}


id: GO:2000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of xyloglucan metabolic process","termid":"GO:2000950"},{"relation_name":"is_a","term_name":"regulation of xyloglucan catabolic process","termid":"GO:2000951"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"positively_regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xyloglucan catabolic process","synonyms":[{"name":"positive regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000953"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["GOC:pz","EC:2.4.1.246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["RHEA:26039","MetaCyc:RXN-9935"],"termid":"GO:0103011"}


id: PBO:0055191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2615","termid":"PBO:0055191"}


id: SO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable_element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"transposable_element_gene","termid":"SO:0000111"},{"relation_name":"is_a","term_name":"engineered_foreign_gene","termid":"SO:0000281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_transposable_element_gene","synonyms":[{"name":"engineered foreign transposable element gene","type":"exact"}],"termid":"SO:0000283"}


id: GO:0004059
data:
  {"annotated_genes":["SJAG_02296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96699],"is_not":false,"summary":null,"term":"GO:0004059"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an aralkylamine = CoA + an N-acetylaralkylamine.","definition_xrefs":["EC:2.3.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"aralkylamine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ARALKYLAMINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-209792","RHEA:20497"],"synonyms":[{"name":"AANAT activity","type":"related"},{"name":"acetyl-CoA:2-arylethylamine N-acetyltransferase activity","type":"related"},{"name":"arylalkylamine N-acetyltransferase activity","type":"related"},{"name":"melatonin rhythm enzyme activity","type":"related"},{"name":"serotonin N-acetyltransferase activity","type":"narrow"},{"name":"serotonin acetylase activity","type":"narrow"},{"name":"serotonin acetyltransferase activity","type":"narrow"}],"termid":"GO:0004059","terms_by_termid":{"GO:0004059":null}}


id: PBO:0002366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine-tRNA ligase beta subunit Frs1 (predicted)","termid":"PBO:0002366"}


id: GO:1990036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions into a sarcoplasmic reticulum.","definition_xrefs":["GOC:BHF","PMID:17286271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: PBO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin protection protein, shugoshin, Sgo1","termid":"PBO:0090455"}


id: SO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence corresponding to a known motif.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_motif","termid":"SO:0001683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_motif","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:nucleotide_motif","type":"exact"},{"name":"nucleotide motif","type":"exact"}],"termid":"SO:0000714"}


id: GO:0140798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 26)= histone H3 L-citrullyl (position 26) + NH4+, resulting in histone H3 citrullination at position 26.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"histone H3R26 arginine deiminase activity","synonyms":[{"name":"H3-R26 citrullination","type":"exact"},{"name":"histone H3-R26 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R26 specific)","type":"exact"}],"termid":"GO:0140798"}


id: GO:0120178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any steroid hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone.","definition_xrefs":["GOC:nln","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"steroid hormone biosynthetic process","termid":"GO:0120178"}


id: PBO:0077575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane inner ear","termid":"PBO:0077575"}


id: PBO:0067434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 555, pseudogene","termid":"PBO:0067434"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: GO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in a host vacuole. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host vacuole (obsolete GO:0044120)","synonyms":[{"name":"development of symbiont in host organelle","type":"broad"}],"termid":"GO:0044120"}


id: PBO:0047712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 3","termid":"PBO:0047712"}


id: GO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of xanthophore differentiation","termid":"GO:0050938"}


id: PATO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A complete three dimensional shape in which for every line connecting pair of points on the object is within the object. Or: a shape lacking cavities. Contrast: concave.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"has_cross_section","term_name":"2-D shape","termid":"PATO:0002006"},{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex 3-D shape","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/0/06/Convex_polygon_illustration1.png"],"termid":"PATO:0002007"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: GO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a neutrophil.","definition_xrefs":["GOC:add","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated immunity","termid":"GO:0002446"}


id: SO:0001648
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_transposon","synonyms":[{"name":"nested transposon","type":"exact"}],"termid":"SO:0001648"}


id: FYPO:0000063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA recombination is abnormal. DNA recombination is a process that results in reassortment of genes, producing gene combinations different from those that were present in the parents.","definition_xrefs":["GO:0006310","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolism phenotype","termid":"FYPO:0000293"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA recombination","synonyms":[{"name":"abnormal recombination","type":"exact"},{"name":"recombination defects","type":"exact"}],"termid":"FYPO:0000063"}


id: GO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus","termid":"GO:0050981"}


id: PBO:0090624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase","termid":"PBO:0090624"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: PBO:0065610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 4","termid":"PBO:0065610"}


id: GO:1990673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the ERGIC membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane (obsolete GO:1990673)","synonyms":[{"name":"intrinsic component of endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990673"}


id: PBO:0081249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 20","termid":"PBO:0081249"}


id: GO:0033829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor.","definition_xrefs":["EC:2.4.1.222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1912355","Reactome:R-HSA-5096538","MetaCyc:2.4.1.222-RXN"],"synonyms":[{"name":"O-fucosylpeptide beta-1,3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-D-GlcNAc:O-L-fucosylpeptide 3-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"}],"termid":"GO:0033829"}


id: GO:0033550
data:
  {"annotated_genes":["SJAG_02013","SJAG_02000","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87760,91137,99889],"is_not":false,"summary":null,"term":"GO:0033550"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase tyrosine phosphate + H2O = MAP kinase tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140096","GO:0003674","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"MAP kinase tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tyrosine-specific MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0033550","terms_by_termid":{"GO:0033550":null}}


id: GO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that inhibits the signaling function of a G protein-coupled receptor by addition of a phosphate group to its third intracellular loop consensus site.","definition_xrefs":["PMID:8396717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"desensitization of G protein-coupled receptor signaling pathway","termid":"GO:0002029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inhibitory G protein-coupled receptor phosphorylation","synonyms":[{"name":"inhibitory G-protein coupled receptor phosphorylation","type":"exact"}],"termid":"GO:0002030"}


id: PATO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000361 gel consistency value (obsolete PATO:0000361)","termid":"PATO:0000361"}


id: FYPO:0000417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished cytokinesis","synonyms":[{"name":"abolished cytokinesis during mitotic cell cycle","type":"related"},{"name":"absent cytokinesis","type":"exact"},{"name":"cytokinesis abolished","type":"exact"},{"name":"cytokinesis abolished during vegetative growth","type":"exact"},{"name":"cytokinesis: absent","type":"related"},{"name":"mitotic cytokinesis abolished","type":"exact"}],"termid":"FYPO:0000417"}


id: SO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Primarily found in animals, the terminal inverted repeat (TIR) transposon superfamily piggyBac elements favour insertion adjacent to TTAA.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac_TIR_transposon","synonyms":[{"name":"DTB transposon","type":"exact"},{"name":"PiggyBac transposable element","type":"exact"},{"name":"piggyBac TIR transposon","type":"exact"}],"termid":"SO:0002283"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["EC:3.5.1.13","RHEA:20297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["MetaCyc:ARYL-ACYLAMIDASE-RXN","KEGG_REACTION:R01862"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: FYPO:0006958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-oxoglutarate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-oxoglutarate level","synonyms":[{"name":"increased 2-oxoglutarate accumulation","type":"related"},{"name":"increased cellular 2-oxoglutarate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-oxoglutarate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006958"}


id: GO:1990355
data:
  {"annotated_genes":["SJAG_04953","SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91670,96078],"is_not":false,"summary":null,"term":"GO:1990355"}]},"cv_name":"biological_process","definition":"The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage from methionine sulphoxide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355","terms_by_termid":{"GO:1990355":null}}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: GO:0033480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galacturonate, a substance composed of galacturonic acid in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galacturonate metabolic process","termid":"GO:0033479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-D-galacturonate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-4"],"synonyms":[{"name":"UDP-D-galacturonate anabolism","type":"exact"},{"name":"UDP-D-galacturonate biosynthesis","type":"exact"},{"name":"UDP-D-galacturonate formation","type":"exact"},{"name":"UDP-D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033480"}


id: FYPO:0003004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during vegetative growth","synonyms":[{"name":"increased ROS accumulation during vegetative growth","type":"related"},{"name":"increased cellular ROS accumulation during vegetative growth","type":"related"},{"name":"increased cellular ROS level during vegetative growth","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during vegetative growth","type":"related"},{"name":"increased cellular reactive oxygen species level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003004"}


id: PBO:0080588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 12","termid":"PBO:0080588"}


id: PBO:0074946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 110","termid":"PBO:0074946"}


id: GO:0046148
data:
  {"annotated_genes":["SJAG_01841","SJAG_01372","SJAG_05283","SJAG_01786","SJAG_04944","SJAG_03173","SJAG_03961","SJAG_00097","SJAG_04109","SJAG_01155","SJAG_04397","SJAG_03862","SJAG_02896","SJAG_01192","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89282,105601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[91877,101249,112694,109945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[113030,90535,87085,66612,88941,88443,91878,92469],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[93894,111484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment anabolism","type":"exact"},{"name":"pigment biosynthesis","type":"exact"},{"name":"pigment formation","type":"exact"},{"name":"pigment synthesis","type":"exact"}],"termid":"GO:0046148","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: GO:0036352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of ubiquitin group at lysine 15 (H2A-K15) in metazoans, and at the equivalent residue in other organisms. Monoubiquitin is first attached to H2A-K15 and K63-linked ubiquitin chains are then extended from this monoubiquitin.","definition_xrefs":["PMID:22980979","GOC:sp","PMID:22713238"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-K15 ubiquitination (obsolete GO:0036352)","synonyms":[{"name":"histone H2A ubiquitination (H2A-K15)","type":"exact"}],"termid":"GO:0036352"}


id: GO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aplanospore formation","termid":"GO:0075289"}


id: PBO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle","termid":"PBO:0031377"}


id: PBO:0077897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapeptide repeat homeobox 2","termid":"PBO:0077897"}


id: GO:0035678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["CL:0000856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"neuromast hair cell development","termid":"GO:0035675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell morphogenesis","termid":"GO:0035678"}


id: PBO:0053598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 626","termid":"PBO:0053598"}


id: GO:0034264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cytokinin 6-isopentenyladenine.","definition_xrefs":["GOC:mah","PMID:18216168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenyl adenine metabolic process","synonyms":[{"name":"isopentenyl adenine metabolism","type":"exact"},{"name":"isopentenyladenine metabolic process","type":"exact"}],"termid":"GO:0034264"}


id: PR:Q9Y827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptl3 gene.","definition_xrefs":["UniProtKB:Q9Y827","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.05c","synonyms":[{"name":"Spom972h-ptl3","type":"exact"}],"termid":"PR:Q9Y827"}


id: PBO:0040405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 6","termid":"PBO:0040405"}


id: PBO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.8","termid":"PBO:0001461"}


id: MOD:00965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-cysteine residue by a formadehyde adduct to 4-thiazolidinecarboxylic acid.","definition_xrefs":["DeltaMass:342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-thiazolidinecarboxylic acid","synonyms":[{"name":"thioproline","type":"exact"}],"termid":"MOD:00965"}


id: GO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to sorbitol","termid":"GO:0072708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sorbitol","synonyms":[{"name":"cellular response to glucitol","type":"exact"}],"termid":"GO:0072709"}


id: PBO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_multiseptate_vegetative_cell","termid":"PBO:0035808"}


id: PBO:0028677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0028677"}


id: GO:0006731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme and prosthetic group metabolic process (obsolete GO:0006731)","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0006731"}


id: GO:0052241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052241)","synonyms":[{"name":"positive chemotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052241"}


id: FYPO:0001528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal GTP binding","termid":"FYPO:0001528"}


id: GO:0032835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft which forms a close network with the visceral epithelium (podocytes) and the mesangium to form the filtration barrier and is surrounded by Bowman's capsule in nephrons of the vertebrate kidney. The glomerulus is part of the nephron and is restricted to one body segment.","definition_xrefs":["GOC:mah","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus development","synonyms":[{"name":"glomerular development","type":"exact"}],"termid":"GO:0032835"}


id: PBO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein implicated in mating Dni2 (predicted)","termid":"PBO:0017912"}


id: GO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont process in which a molecule secreted by the symbiont activates a resistance gene-dependent defense response signaling pathway in the plant host, in order to activate a hypersensitive response to induce necrosis. In the plant, this process involves the direct or indirect recognition of the symbiont effector protein for example through plant resistance receptor or R proteins (or R genes).","definition_xrefs":["PMID:23411798","PMID:27641772","PMID:16497589","PMID:22241993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"modulation by symbiont of host resistance gene-dependent defense response","termid":"GO:0052158"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated activation of plant hypersensitive response by symbiont","secondary_identifiers":["GO:0052527","GO:0052423","GO:0052101","Wikipedia:Effector-triggered_immunity","GO:0052286"],"synonyms":[{"name":"ETI triggered of host innate immune response","type":"related"},{"name":"ETI-triggered of host innate immune response","type":"related"},{"name":"activation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"activation by organism of host gene-for-gene resistance","type":"exact"},{"name":"activation by organism of host resistance gene-dependent defense response","type":"exact"},{"name":"activation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"activation of HR","type":"narrow"},{"name":"activation of hypersensitive response","type":"narrow"},{"name":"avirulence protein","type":"related"},{"name":"effector-mediated induction of plant hypersensitive response by symbiont","type":"exact"},{"name":"effector-triggered immunity","type":"broad"},{"name":"effector-triggered induction of host innate immune response","type":"related"},{"name":"effector-triggered induction of plant hypersensitive response by symbiont","type":"related"},{"name":"effector-triggered necrosis","type":"related"},{"name":"induction by organism of defense response in host by specific elicitors","type":"broad"},{"name":"induction by organism of host gene-for-gene resistance","type":"exact"},{"name":"induction by organism of pathogen-race/host plant cultivar-specific resistance in host","type":"broad"},{"name":"induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"induction of effector-triggered immunity (ETI)","type":"related"},{"name":"necrotrophic effector","type":"related"},{"name":"positive regulation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"positive regulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"positive regulation by symbiont of host resistance gene-dependent defense response","type":"related"},{"name":"positive regulation by symbiont of plant HR","type":"exact"},{"name":"positive regulation by symbiont of plant hypersensitive response","type":"exact"}],"termid":"GO:0080185"}


id: GO:0031719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cannabinoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cannabinoid receptor binding","termid":"GO:0031717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 cannabinoid receptor binding","synonyms":[{"name":"type 2 cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031719"}


id: PBO:0040433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A1","termid":"PBO:0040433"}


id: PBO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27","termid":"PBO:0071315"}


id: GO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate or extent of actin polymerization as part of sperm capacitation. This process prevents a spontaneous acrosome reaction.","definition_xrefs":["PMID:15749953","PMID:26514336","PMID:27178669","PMID:25966627"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament polymerization involved in sperm capacitation (obsolete GO:0061954)","termid":"GO:0061954"}


id: FYPO:0002145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to diethyl maleate (DEM), a compound which can induce oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during cellular response to oxidative stress","termid":"FYPO:0001789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to DEM","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to DEM","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0002145"}


id: PBO:0075892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5","termid":"PBO:0075892"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: PBO:0055423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2853","termid":"PBO:0055423"}


id: PBO:0042555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 18","termid":"PBO:0042555"}


id: FYPO:0007941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) during  the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal chromatin organization during meiotic cell cycle","synonyms":[{"name":"normal chromatin organisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007941"}


id: PBO:0063323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1","termid":"PBO:0063323"}


id: PBO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifts","termid":"PBO:0003020"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: GO:0007300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transfer of constituents synthesized in the ovarian nurse cells to the oocyte, through the ring canals, as the egg chamber is growing. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ovarian nurse cell to oocyte transport","synonyms":[{"name":"nurse cell to oocyte transport","type":"broad"}],"termid":"GO:0007300"}


id: PBO:0062810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 1","termid":"PBO:0062810"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:10825151","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: GO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADP+ = 7-dehydrocholesterol + H+ + NADPH.","definition_xrefs":["RHEA:23984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"7-dehydrocholesterol reductase activity","secondary_identifiers":["EC:1.3.1.21","Reactome:R-HSA-196402","MetaCyc:RXN66-323","Reactome:R-HSA-6807055"],"synonyms":[{"name":"7-DHC reductase activity","type":"related"},{"name":"cholesterol:NADP+ delta7-oxidoreductase activity","type":"related"},{"name":"sterol Delta(7)-reductase activity","type":"broad"},{"name":"sterol delta7-reductase activity","type":"related"}],"termid":"GO:0047598"}


id: PATO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conical quality inhering in a bearer by virtue of the bearer's resembling a cone, with the pointed end attached to an organism.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/obconical"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conical","termid":"PATO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obconical","termid":"PATO:0002347"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: GO:0102121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a ceramide = a sphingoid base + a fatty acid.","definition_xrefs":["EC:3.5.1.23","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"ceramidase activity","secondary_identifiers":["MetaCyc:RXN-11375"],"termid":"GO:0102121"}


id: FYPO:0007432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which transversion mutations occur at a lower frequency than normal.","definition_xrefs":["PMID:15805471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mutation rate","termid":"FYPO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased transversion frequency","termid":"FYPO:0007432"}


id: FYPO:0003645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation during vegetative growth (obsolete FYPO:0003645)","synonyms":[{"name":"normal peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003645"}


id: GO:0003229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of ventricular cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle tissue development","synonyms":[{"name":"ventricular myocardium development","type":"exact"}],"termid":"GO:0003229"}


id: FYPO:0007488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the vacuole instead.","definition_xrefs":["PMID:32918581","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to vacuole","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to vacuole during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to vacuole","type":"exact"}],"termid":"FYPO:0007488"}


id: GO:0090434
data:
  {"annotated_genes":["SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101663],"is_not":false,"summary":null,"term":"GO:0090434"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + oleic acid + CoA = AMP + diphosphate + oleoyl-CoA.","definition_xrefs":["PMID:18071249","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"oleoyl-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oleoyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0090434","terms_by_termid":{"GO:0090434":null}}


id: GO:0071263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to starvation","termid":"GO:0071262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to starvation","synonyms":[{"name":"down regulation of translation initiation in response to starvation","type":"exact"},{"name":"down-regulation of translation initiation in response to starvation","type":"exact"},{"name":"downregulation of translation initiation in response to starvation","type":"exact"},{"name":"inhibition of translation initiation in response to starvation","type":"narrow"},{"name":"negative regulation of translational initiation in response to nutrient starvation","type":"exact"}],"termid":"GO:0071263"}


id: PBO:0109619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 11 pseudogene","termid":"PBO:0109619"}


id: PBO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase non-catalytic subunit Gcd10","termid":"PBO:0089720"}


id: GO:1902994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid efflux.","definition_xrefs":["GOC:sjp","PMID:12042316","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"regulates","term_name":"phospholipid efflux","termid":"GO:0033700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phospholipid efflux","synonyms":[{"name":"regulation of phospholipid export","type":"exact"}],"termid":"GO:1902994"}


id: PBO:0081281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 56, pseudogene","termid":"PBO:0081281"}


id: PR:O13842
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cda1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin deacetylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.03","synonyms":[{"name":"Spom972h-cda1","type":"exact"}],"termid":"PR:O13842"}


id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0005226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human leukocyte receptor 1 ortholog","termid":"PBO:0005226"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: PBO:0083530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SMI1/YGR229C","termid":"PBO:0083530"}


id: PBO:0082079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase involved in deoxyribonucleoside monophosphate degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential gene; YBR242W has a paralog, YGL101W, that arose from the whole genome duplication","termid":"PBO:0082079"}


id: GO:0043671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner part of the exine, which stains.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endexine","termid":"GO:0043671"}


id: PBO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 7","termid":"PBO:0043526"}


id: GO:0070478
data:
  {"annotated_genes":["SJAG_04818","SJAG_01818","SJAG_00854","SJAG_04118","SJAG_00226","SJAG_04824","SJAG_03179","SJAG_04056","SJAG_05014","SJAG_04084","SJAG_01218","SJAG_04321","SJAG_01521","SJAG_03805","SJAG_04153","SJAG_04006","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84896,85927,87620,89167,92019,93350,97314,98162,100476,101320,102526,103525,104891,111944,112210,113266,114318],"is_not":false,"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["PMID:12769863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-5' NMD","type":"exact"},{"name":"3'-5' nonsense-mediated decay","type":"exact"},{"name":"3'-5' nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"}],"termid":"GO:0070478","terms_by_termid":{"GO:0070478":null}}


id: SO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoding by frameshifting a particular site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_frameshifted","synonyms":[{"name":"translationally frameshifted","type":"exact"}],"termid":"SO:0000887"}


id: PBO:0056021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 2","termid":"PBO:0056021"}


id: GO:1903982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the length of a microvillus.","definition_xrefs":["PMID:22114352","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of microvillus length","termid":"GO:0032532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microvillus length","synonyms":[{"name":"down regulation of regulation of microvillus length","type":"exact"},{"name":"down-regulation of regulation of microvillus length","type":"exact"},{"name":"downregulation of regulation of microvillus length","type":"exact"},{"name":"inhibition of regulation of microvillus length","type":"narrow"}],"termid":"GO:1903982"}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: PBO:0086311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with rhodanese activity; contains a rhodanese-like domain similar to Rdl1p, Uba4p, Tum1p, and Ych1p; overexpression causes a cell cycle delay; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086311"}


id: PBO:0063195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 14","termid":"PBO:0063195"}


id: GO:0031430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines.","definition_xrefs":["GOC:mtg_muscle","ISBN:0198506732","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A band","termid":"GO:0031672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"M band","secondary_identifiers":["Wikipedia:Sarcomere#bands"],"synonyms":[{"name":"M disc","type":"exact"},{"name":"M line","type":"narrow"},{"name":"mesophragma","type":"exact"},{"name":"midline","type":"broad"}],"termid":"GO:0031430"}


id: PBO:0073437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 6","termid":"PBO:0073437"}


id: PBO:0065298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 2","termid":"PBO:0065298"}


id: PR:Q09671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.10 gene.","definition_xrefs":["UniProtKB:Q09671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C5H10.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.10","synonyms":[{"name":"Old yellow enzyme homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC5H10.10","type":"exact"}],"termid":"PR:Q09671"}


id: PBO:0110266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Nrt1","termid":"PBO:0110266"}


id: PBO:0059882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 5","termid":"PBO:0059882"}


id: GO:0035630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The deposition of hydroxyapatite, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone mineralization","termid":"GO:0030282"},{"relation_name":"part_of","term_name":"ossification involved in bone maturation","termid":"GO:0043931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone mineralization involved in bone maturation","termid":"GO:0035630"}


id: GO:0004838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tyrosine aminotransferase activity","termid":"GO:0070547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-tyrosine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["Reactome:R-HSA-517444","Reactome:R-HSA-71155","MetaCyc:TYROSINE-AMINOTRANSFERASE-RXN","RHEA:15093"],"synonyms":[{"name":"L-phenylalanine 2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-tyrosine aminotransferase activity","type":"broad"},{"name":"TyrAT activity","type":"related"},{"name":"glutamic phenylpyruvic aminotransferase activity","type":"related"},{"name":"glutamic-hydroxyphenylpyruvic transaminase activity","type":"related"},{"name":"phenylalanine aminotransferase activity","type":"related"},{"name":"phenylalanine transaminase activity","type":"related"},{"name":"phenylalanine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"phenylpyruvate transaminase activity","type":"related"},{"name":"phenylpyruvic acid transaminase activity","type":"related"},{"name":"tyrosine aminotransferase activity","type":"broad"},{"name":"tyrosine transaminase activity","type":"broad"},{"name":"tyrosine-2-ketoglutarate aminotransferase activity","type":"broad"},{"name":"tyrosine-alpha-ketoglutarate aminotransferase activity","type":"broad"},{"name":"tyrosine-alpha-ketoglutarate transaminase activity","type":"broad"}],"termid":"GO:0004838"}


id: GO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"positively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to self antigen","synonyms":[{"name":"activation of tolerance induction to self antigen","type":"narrow"},{"name":"stimulation of tolerance induction to self antigen","type":"narrow"},{"name":"up regulation of tolerance induction to self antigen","type":"exact"},{"name":"up-regulation of tolerance induction to self antigen","type":"exact"},{"name":"upregulation of tolerance induction to self antigen","type":"exact"}],"termid":"GO:0002651"}


id: PBO:0006166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-part_of","termid":"PBO:0006166"}


id: GO:0008359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bicoid mRNA localization","synonyms":[{"name":"regulation of bicoid mRNA localisation","type":"exact"}],"termid":"GO:0008359"}


id: GO:0060636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0032953"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"negatively_regulates","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of (1->3)-beta-D-glucan biosynthetic process","synonyms":[{"name":"negative regulation of 1,3-beta-D-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060636"}


id: PBO:0057193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 365b","termid":"PBO:0057193"}


id: FYPO:0002549
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[115529,115541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[115540,115528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"hypersensitive to stress","type":"exact"},{"name":"stress resistance: decreased","type":"related"}],"termid":"FYPO:0002549","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: PBO:0108889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 2","termid":"PBO:0108889"}


id: PBO:0029707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division","termid":"PBO:0029707"}


id: PBO:0026896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_nitrogen_starvation","termid":"PBO:0026896"}


id: FYPO:0001105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which catalase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal catalase activity","termid":"FYPO:0001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished catalase activity","synonyms":[{"name":"catalase activity abolished","type":"exact"}],"termid":"FYPO:0001105"}


id: PBO:0077102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 9","termid":"PBO:0077102"}


id: PBO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cingulin","termid":"PBO:0042930"}


id: PBO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-2D_boundary_of","termid":"PBO:0034332"}


id: PBO:0072402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 7","termid":"PBO:0072402"}


id: GO:0046499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-adenosylmethioninamine, (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt.","definition_xrefs":["GOC:mah","MetaCyc:S-ADENOSYLMETHIONINAMINE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"S-adenosylmethioninamine metabolic process","synonyms":[{"name":"S-adenosylmethioninamine metabolism","type":"exact"}],"termid":"GO:0046499"}


id: GO:0032909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta2 production","termid":"GO:0032906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transforming growth factor beta2 production","synonyms":[{"name":"regulation of TGF-B2 production","type":"exact"},{"name":"regulation of TGFB2 production","type":"exact"},{"name":"regulation of transforming growth factor-beta2 production","type":"exact"}],"termid":"GO:0032909"}


id: PBO:0080268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 31 pseudogene","termid":"PBO:0080268"}


id: GO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:18315545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"positively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to phosphate starvation","termid":"GO:0080040"}


id: PBO:0089469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1","termid":"PBO:0089469"}


id: PBO:0060183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3B, cell surface associated","termid":"PBO:0060183"}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: GO:2000048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"},{"relation_name":"negatively_regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000048"}


id: PBO:0045404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 6","termid":"PBO:0045404"}


id: GO:0090057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of the different tissues of the root around its radial axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial pattern formation","termid":"GO:0009956"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root radial pattern formation","termid":"GO:0090057"}


id: GO:1902474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to synapse","synonyms":[{"name":"activation of protein localisation to synapse","type":"narrow"},{"name":"activation of protein localization to synapse","type":"narrow"},{"name":"positive regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localisation to synapse","type":"exact"},{"name":"up regulation of protein localization to synapse","type":"exact"},{"name":"up-regulation of protein localisation to synapse","type":"exact"},{"name":"up-regulation of protein localization to synapse","type":"exact"},{"name":"upregulation of protein localisation to synapse","type":"exact"},{"name":"upregulation of protein localization to synapse","type":"exact"}],"termid":"GO:1902474"}


id: PBO:0082832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved zinc-finger domain protein involved in pre-mRNA splicing; critical for splicing of nearly all intron-containing genes; required for assembly of U4 snRNA into the U4/U6 particle","termid":"PBO:0082832"}


id: PBO:0057853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3164","termid":"PBO:0057853"}


id: PBO:0048223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest and DNA damage inducible alpha","termid":"PBO:0048223"}


id: GO:0097207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a bud. Bud dormancy is a suspension of most physiological activity and growth that can be reactivated. It may be a response to environmental conditions such as seasonality or extreme heat, drought, or cold. The exit from bud dormancy is marked by the resumed growth of the bud.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dormancy process","synonyms":[{"name":"bud dormancy","type":"related"}],"termid":"GO:0097207"}


id: PR:Q9UT74
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lys2 gene.","definition_xrefs":["UniProtKB:Q9UT74","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoaconitase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.16","synonyms":[{"name":"Spom972h-lys2","type":"exact"},{"name":"homoaconitate hydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT74"}


id: PBO:0013132
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPHerical shape","termid":"PBO:0013132"}


id: FYPO:0002056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased mitochondrial translation","synonyms":[{"name":"decreased mitochondrial protein biosynthesis","type":"exact"},{"name":"decreased mitochondrial protein synthesis","type":"exact"},{"name":"decreased mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial translation during vegetative growth","type":"exact"},{"name":"decreased rate of mitochondrial protein synthesis","type":"related"},{"name":"reduced mitochondrial translation","type":"exact"}],"termid":"FYPO:0002056"}


id: GO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete S100 beta biosynthetic process (obsolete GO:0048152)","synonyms":[{"name":"S100 beta anabolism","type":"exact"},{"name":"S100 beta biosynthesis","type":"exact"},{"name":"S100 beta formation","type":"exact"},{"name":"S100 beta synthesis","type":"exact"}],"termid":"GO:0048152"}


id: PBO:0088309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase","termid":"PBO:0088309"}


id: PBO:0071153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 18","termid":"PBO:0071153"}


id: PBO:0027121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis","termid":"PBO:0027121"}


id: GO:0052712
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104885],"is_not":false,"summary":null,"term":"GO:0052712"},{"annotations":[104886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphosphingolipid + H2O = sphingolipid + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052712","terms_by_termid":{"GO:0052712":null,"GO:0052714":null}}


id: GO:0036298
data:
  {"annotated_genes":["SJAG_03994","SJAG_05280","SJAG_02294","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95150,96723,99283,107648],"is_not":false,"summary":null,"term":"GO:0036298"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA by a mechanism that involves the exchange, reciprocal or nonreciprocal, of genetic material between the broken DNA molecule and a homologous DNA region.","definition_xrefs":["PMID:20658649","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombinational repair","termid":"GO:0000725"},{"relation_name":"is_a","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01410":null,"SJAG_02294":null,"SJAG_03994":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"recombinational interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fanconi pathway","type":"related"},{"name":"recombination-dependent interstrand cross-link repair","type":"exact"}],"termid":"GO:0036298","terms_by_termid":{"GO:0036298":null}}


id: GO:0060407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate, frequency or extent of penile erection. Penile erection is the hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of penile erection","termid":"GO:0060405"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"penile erection","termid":"GO:0043084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of penile erection","termid":"GO:0060407"}


id: PR:O59706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3A subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12786:SF2","PRO:DNx","OMA:SCHPO02615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.09","secondary_identifiers":["UniProtKB:O59706"],"synonyms":[{"name":"Spom972h-SF3A3","type":"exact"},{"name":"spliceosome-associated protein 61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59706"}


id: PBO:0086438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative K+/H+ antiporter; involved in intracellular cation homeostasis; promotes copper binding to Fet3p multicopper oxidase; localized to Golgi vesicles and detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086438"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: GO:0090246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a presomitic mesoderm narrows along the left-right axis and lengthens in the rostral-caudal axis contributing to somitogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"},{"relation_name":"part_of","term_name":"axis elongation involved in somitogenesis","termid":"GO:0090245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}


id: PBO:0051646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 1","termid":"PBO:0051646"}


id: PBO:0060158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 6 (pseudogene)","termid":"PBO:0060158"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: GO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + rifamycin B = H2O2 + rifamycin O.","definition_xrefs":["EC:1.10.3.6","RHEA:11292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"rifamycin-B oxidase activity","secondary_identifiers":["KEGG_REACTION:R03736","MetaCyc:RIFAMYCIN-B-OXIDASE-RXN"],"synonyms":[{"name":"rifamycin B oxidase activity","type":"related"},{"name":"rifamycin-B-oxidase activity","type":"exact"},{"name":"rifamycin-B:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050264"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: PBO:0048259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 1","termid":"PBO:0048259"}


id: GO:1903032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microtubule plus-end binding.","definition_xrefs":["GOC:hjd","GOC:TermGenie","PMID:16148041","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule plus-end binding","termid":"GO:1903031"},{"relation_name":"is_a","term_name":"negative regulation of microtubule binding","termid":"GO:1904527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microtubule plus-end binding","synonyms":[{"name":"down regulation of microtubule plus-end binding","type":"exact"},{"name":"down-regulation of microtubule plus-end binding","type":"exact"},{"name":"downregulation of microtubule plus-end binding","type":"exact"},{"name":"inhibition of microtubule plus-end binding","type":"narrow"}],"termid":"GO:1903032"}


id: PBO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4","termid":"PBO:0036516"}


id: PBO:0064033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 67","termid":"PBO:0064033"}


id: PBO:0068225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 532","termid":"PBO:0068225"}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: GO:0030834
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_01943","SJAG_01894","SJAG_04703","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88424,84410,110381,88608,94983,114660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin depolymerization","type":"exact"}],"termid":"GO:0030834","terms_by_termid":{"GO:0051016":null}}


id: PBO:0051505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit beta","termid":"PBO:0051505"}


id: PBO:0073536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2A","termid":"PBO:0073536"}


id: GO:0031520
data:
  {"annotated_genes":["SJAG_04668","SJAG_02392","SJAG_02351","SJAG_04509","SJAG_00514","SJAG_01978","SJAG_01437","SJAG_01738","SJAG_02684","SJAG_01345","SJAG_00368","SJAG_02258","SJAG_04673","SJAG_02916","SJAG_01983","SJAG_01189","SJAG_05285","SJAG_01888","SJAG_03608","SJAG_02924","SJAG_04637","SJAG_04905","SJAG_01794","SJAG_01660","SJAG_01388"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84042,84293,84433,85990,88498,88585,88800,89575,91627,93143,96439,96752,97866,99090,102653,104510,105508,106929,110235,110440,111517,111871,113247],"is_not":false,"summary":null,"term":"GO:0031520"},{"annotations":[91943,102652],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106186"},{"annotations":[92464,106262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070867"},{"annotations":[95729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the cell tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00514":null,"SJAG_01189":null,"SJAG_01345":null,"SJAG_01388":null,"SJAG_01437":null,"SJAG_01660":null,"SJAG_01738":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_02258":null,"SJAG_02351":null,"SJAG_02392":null,"SJAG_02684":null,"SJAG_02916":null,"SJAG_02924":null,"SJAG_03608":null,"SJAG_04509":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04905":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'plasma membrane, cell tip'","type":"exact"}],"termid":"GO:0031520","terms_by_termid":{"GO:0031520":null,"GO:0070867":null,"GO:0106186":null,"GO:1902929":null}}


id: GO:0032287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature peripheral nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"myelination in peripheral nervous system","termid":"GO:0022011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system myelin maintenance","synonyms":[{"name":"myelin maintenance in peripheral nervous system","type":"exact"},{"name":"peripheral nervous system myelin sheath maintenance","type":"exact"}],"termid":"GO:0032287"}


id: PBO:0084256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol phosphatase involved in inositol pyrophosphate metabolism; hydrolyzes the beta-phosphate from the 5-diphosphate group of PP-InsPs including: 5PP-IP5 (IP7), 1,5PP-IP4 (IP8) and 5-PP-InsP4; functions as an anti-prion (anti-[PSI]) component; member of the atypical dual-specificity subgroup of the protein tyrosine-phosphatase (PTP) superfamily; localizes to the cytoplasm","termid":"PBO:0084256"}


id: PATO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a population by virtue of some of it's members' ability to survive.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-viable","termid":"PATO:0001770"}


id: GO:0035228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"},{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate-cysteine ligase activity","synonyms":[{"name":"down regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"down-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"downregulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"inhibition of glutamate-cysteine ligase activity","type":"narrow"}],"termid":"GO:0035228"}


id: PBO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13 (predicted)","termid":"PBO:0001261"}


id: GO:0090371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of glycerol transport","termid":"GO:0090371"}


id: GO:1904971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral translation.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:19666601","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral translation","synonyms":[{"name":"regulation of viral protein anabolism","type":"exact"},{"name":"regulation of viral protein biosynthesis","type":"exact"},{"name":"regulation of viral protein biosynthetic process","type":"exact"},{"name":"regulation of viral protein formation","type":"exact"},{"name":"regulation of viral protein synthesis","type":"exact"}],"termid":"GO:1904971"}


id: PBO:0027895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027895"}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: FYPO:0004304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphatase activity","synonyms":[{"name":"reduced phosphatase activity","type":"exact"}],"termid":"FYPO:0004304"}


id: PBO:0078490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 9-1","termid":"PBO:0078490"}


id: PR:O43075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translational activator of cytochrome c oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C8D2.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.12c","secondary_identifiers":["UniProtKB:O43075"],"synonyms":[{"name":"Spom972h-TACO1","type":"exact"}],"termid":"PR:O43075"}


id: PBO:0059463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSH2 overlapping transcript 1","termid":"PBO:0059463"}


id: GO:0031606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the cytosolic proteasome core complex.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, alpha-subunit complex","termid":"GO:0019773"},{"relation_name":"part_of","term_name":"cytosolic proteasome core complex","termid":"GO:0031603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome core complex, alpha-subunit complex","termid":"GO:0031606"}


id: PBO:0079106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22D1 antisense RNA 1","termid":"PBO:0079106"}


id: PBO:0079371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 6","termid":"PBO:0079371"}


id: GO:1900280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell costimulation","termid":"GO:1900279"},{"relation_name":"is_a","term_name":"negative regulation of T cell costimulation","termid":"GO:2000524"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell costimulation","termid":"GO:0035783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"down regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"down-regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"downregulation of CD4-positive, alpha beta T cell costimulation","type":"exact"},{"name":"inhibition of CD4-positive, alpha beta T cell costimulation","type":"narrow"},{"name":"negative regulation of CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:1900280"}


id: PBO:0034246
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-quality_of","termid":"PBO:0034246"}


id: GO:1904542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["PMID:24660806","GOC:TermGenie","GOC:pad","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"}


id: PBO:0070706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 11","termid":"PBO:0070706"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: PBO:0058868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9901","termid":"PBO:0058868"}


id: GO:1905914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","PMID:22362515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"positively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion export across plasma membrane","synonyms":[{"name":"activation of calcium ion efflux from cell","type":"narrow"},{"name":"activation of calcium ion export from cell","type":"narrow"},{"name":"positive regulation of calcium ion efflux from cell","type":"exact"},{"name":"positive regulation of calcium ion export from cell","type":"exact"},{"name":"up regulation of calcium ion efflux from cell","type":"exact"},{"name":"up regulation of calcium ion export from cell","type":"exact"},{"name":"up-regulation of calcium ion efflux from cell","type":"exact"},{"name":"up-regulation of calcium ion export from cell","type":"exact"},{"name":"upregulation of calcium ion efflux from cell","type":"exact"},{"name":"upregulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905914"}


id: GO:1900033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of trichome patterning","termid":"GO:1900032"},{"relation_name":"negatively_regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of trichome patterning","synonyms":[{"name":"down regulation of trichome distribution","type":"broad"},{"name":"down regulation of trichome pattern biosynthesis","type":"exact"},{"name":"down regulation of trichome pattern formation","type":"exact"},{"name":"down regulation of trichome pattern specification","type":"related"},{"name":"down regulation of trichome patterning","type":"related"},{"name":"down regulation of trichome spacing","type":"exact"},{"name":"down-regulation of trichome distribution","type":"broad"},{"name":"down-regulation of trichome pattern biosynthesis","type":"exact"},{"name":"down-regulation of trichome pattern formation","type":"exact"},{"name":"down-regulation of trichome pattern specification","type":"related"},{"name":"down-regulation of trichome patterning","type":"related"},{"name":"down-regulation of trichome spacing","type":"exact"},{"name":"downregulation of trichome distribution","type":"broad"},{"name":"downregulation of trichome pattern biosynthesis","type":"exact"},{"name":"downregulation of trichome pattern formation","type":"exact"},{"name":"downregulation of trichome pattern specification","type":"related"},{"name":"downregulation of trichome patterning","type":"related"},{"name":"downregulation of trichome spacing","type":"exact"},{"name":"inhibition of trichome distribution","type":"broad"},{"name":"inhibition of trichome pattern biosynthesis","type":"exact"},{"name":"inhibition of trichome pattern formation","type":"exact"},{"name":"inhibition of trichome pattern specification","type":"related"},{"name":"inhibition of trichome patterning","type":"related"},{"name":"inhibition of trichome spacing","type":"exact"},{"name":"negative regulation of trichome distribution","type":"broad"},{"name":"negative regulation of trichome pattern biosynthesis","type":"exact"},{"name":"negative regulation of trichome pattern formation","type":"exact"},{"name":"negative regulation of trichome pattern specification","type":"related"},{"name":"negative regulation of trichome spacing","type":"exact"}],"termid":"GO:1900033"}


id: PBO:0080760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis","termid":"PBO:0080760"}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: FYPO:0000457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein methylation during vegetative growth","termid":"FYPO:0006122"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methylation during vegetative growth","synonyms":[{"name":"abnormal histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000457"}


id: FYPO:0007661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of meiosis I.","definition_xrefs":["PMID:11331883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I metaphase","type":"exact"}],"termid":"FYPO:0007661"}


id: PBO:0011181
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011181"}


id: GO:0034804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-11,12-epoxide.","definition_xrefs":["UM-BBD_reactionID:r1119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene 11,12-epoxidase activity","termid":"GO:0034804"}


id: GO:1905108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111740],"is_not":false,"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to guanosine.","definition_xrefs":["PMID:26007660","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside binding","termid":"GO:0032550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanosine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905108","terms_by_termid":{"GO:1905108":null}}


id: PBO:0077584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 3","termid":"PBO:0077584"}


id: PBO:0088860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleus-vacuole junction protein Nvj2","termid":"PBO:0088860"}


id: GO:0034514
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84484],"is_not":false,"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the presence of unfolded proteins in the mitochondrial matrix; results in transcriptional upregulation of nuclear genes encoding mitochondrial stress proteins.","definition_xrefs":["PMID:17849004","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to unfolded protein","termid":"GO:0034620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mtUPR","type":"exact"}],"termid":"GO:0034514","terms_by_termid":{"GO:0034514":null}}


id: PBO:0063918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta pseudogene 1","termid":"PBO:0063918"}


id: PBO:0051415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-5 (pseudogene)","termid":"PBO:0051415"}


id: GO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism causes vasodilation of blood vessels, usually causing a reduction in blood pressure, in another organism.","definition_xrefs":["PMID:21050868","GOC:ecd","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation in another organism","synonyms":[{"name":"modulation of vasodilation in other organism","type":"related"},{"name":"regulation of vasodilation in other organism","type":"related"},{"name":"vasodilation in other organism","type":"exact"}],"termid":"GO:0044552"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_04574","SJAG_00327","SJAG_00819","SJAG_01762","SJAG_02627","SJAG_01698","SJAG_00984","SJAG_00399","SJAG_03886","SJAG_04418","SJAG_02362","SJAG_04933","SJAG_00796","SJAG_04410","SJAG_00768","SJAG_02267","SJAG_04245","SJAG_01076","SJAG_04530","SJAG_02031","SJAG_00884","SJAG_00757","SJAG_03436","SJAG_00939","SJAG_01771","SJAG_03855","SJAG_05239","SJAG_00857","SJAG_00619","SJAG_02828","SJAG_03957","SJAG_01354","SJAG_02545","SJAG_02503","SJAG_02348","SJAG_02667","SJAG_01410","SJAG_01708","SJAG_03832","SJAG_04156","SJAG_01049","SJAG_05214","SJAG_02822","SJAG_03161","SJAG_04863","SJAG_04995","SJAG_01436","SJAG_02556","SJAG_03722","SJAG_04210","SJAG_03780","SJAG_03682","SJAG_03068","SJAG_02079","SJAG_02194","SJAG_00871","SJAG_01887","SJAG_03495","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84446,85191,85839,85935,86568,88066,88777,89367,91852,92283,92344,93534,95162,95163,95508,96632,97087,97584,98277,99043,99265,101019,101393,102490,103320,103742,104622,105160,106101,106297,106567,106892,107544,107618,107619,108117,108485,109460,109637,110707,111169,111343,111578,111743,111974,112318,112589,112867,113184,113623,114207,114787,114956],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[99263,111972,108593,109458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[91193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[91194,106438,110667,107620,92169,85315,104191,107595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:elh","GOC:vw","PMID:22976174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_00984":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003699","GO:0003698"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PR:P54874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hcs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P54874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.14c","synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMG-CoA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hcs1","type":"exact"}],"termid":"PR:P54874"}


id: GO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus (obsolete GO:0042993)","synonyms":[{"name":"activation of transcription factor import into nucleus","type":"narrow"},{"name":"positive regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"positive regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of transcription factor-nucleus import","type":"exact"},{"name":"stimulation of transcription factor import into nucleus","type":"narrow"},{"name":"up regulation of transcription factor import into nucleus","type":"exact"},{"name":"up-regulation of transcription factor import into nucleus","type":"exact"},{"name":"upregulation of transcription factor import into nucleus","type":"exact"}],"termid":"GO:0042993"}


id: PR:O74760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14005:SF0","PRO:DNx","OMA:SCHPO03656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.05","secondary_identifiers":["UniProtKB:O74760"],"synonyms":[{"name":"Spom972h-EIF3A","type":"exact"},{"name":"eIF3 p110 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 110 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3, p110 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74760"}


id: PBO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in esophageal cancer 1","termid":"PBO:0044862"}


id: PBO:0068412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 3","termid":"PBO:0068412"}


id: GO:0031683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a complex of G-protein beta/gamma subunits.","definition_xrefs":["GOC:nln","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G-protein beta/gamma-subunit complex binding","termid":"GO:0031683"}


id: PBO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.-","termid":"PBO:0002003"}


id: PBO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3E","termid":"PBO:0017897"}


id: PBO:0076367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 4, pseudogene","termid":"PBO:0076367"}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: PBO:0078179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-3","termid":"PBO:0078179"}


id: PBO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like","termid":"PBO:0048837"}


id: PBO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 3","termid":"PBO:0042899"}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: PBO:0067792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 94","termid":"PBO:0067792"}


id: FYPO:0003538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature meiosis","termid":"FYPO:0000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature meiosis I","synonyms":[{"name":"advanced meiosis I","type":"exact"},{"name":"premature first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003538"}


id: GO:0008548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. Activity is associated with the signal-recognition particle, a protein and RNA-containing structure involved in endoplasmic reticulum-associated protein synthesis.","definition_xrefs":["MetaCyc:3.6.1.49-RXN","EC:3.6.5.4"],"gene_count":0,"genotype_count":0,"name":"obsolete signal-recognition-particle GTPase activity (obsolete GO:0008548)","synonyms":[{"name":"signal-recognition-particle GTPase activity","type":"exact"}],"termid":"GO:0008548"}


id: PBO:0078869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 3","termid":"PBO:0078869"}


id: PBO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_recombination_frequency_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033748"}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: GO:0021781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glial cell.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate commitment","termid":"GO:0021781"}


id: PBO:0004741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein (predicted)","termid":"PBO:0004741"}


id: PBO:0083117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation protein; loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; along with Rfa1p, binds to ultrafine anaphase bridges in mitotic cells and prevents accumulation of chromatin bridges by stimulating the Mec1p kinase and suppressing homologous recombination; ortholog of human TopBP1; forms nuclear foci upon DNA replication stress","termid":"PBO:0083117"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: FYPO:0005194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation during mitotic S phase","synonyms":[{"name":"decreased protein breakdown during mitotic S phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic S phase","type":"exact"},{"name":"decreased protein catabolism during mitotic S phase","type":"exact"},{"name":"decreased protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic S phase","type":"exact"}],"termid":"FYPO:0005194"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: GO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-16.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-16 binding","synonyms":[{"name":"IL-16 binding","type":"exact"}],"termid":"GO:0042011"}


id: PBO:0064645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 2","termid":"PBO:0064645"}


id: PBO:0091254
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CHS3","termid":"PBO:0091254"}


id: PBO:0090426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase E","termid":"PBO:0090426"}


id: PBO:0084305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-sulfur protein subunit of succinate dehydrogenase; the complex couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; other members are Sdh1p, Sdh3p, and Sdh4p","termid":"PBO:0084305"}


id: GO:1904007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["PMID:11211872","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"},{"relation_name":"is_a","term_name":"regulation of phospholipase D activity","termid":"GO:1904005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipase D activity","synonyms":[{"name":"activation of choline phosphatase activity","type":"narrow"},{"name":"activation of lecithinase D activity","type":"narrow"},{"name":"activation of lipophosphodiesterase II activity","type":"narrow"},{"name":"activation of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"activation of phospholipase D activity","type":"narrow"},{"name":"positive regulation of choline phosphatase activity","type":"exact"},{"name":"positive regulation of lecithinase D activity","type":"exact"},{"name":"positive regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"positive regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of choline phosphatase activity","type":"exact"},{"name":"up regulation of lecithinase D activity","type":"exact"},{"name":"up regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up regulation of phospholipase D activity","type":"exact"},{"name":"up-regulation of choline phosphatase activity","type":"exact"},{"name":"up-regulation of lecithinase D activity","type":"exact"},{"name":"up-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"up-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"up-regulation of phospholipase D activity","type":"exact"},{"name":"upregulation of choline phosphatase activity","type":"exact"},{"name":"upregulation of lecithinase D activity","type":"exact"},{"name":"upregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"upregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"upregulation of phospholipase D activity","type":"exact"}],"termid":"GO:1904007"}


id: PBO:0056354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 3","termid":"PBO:0056354"}


id: GO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine and peptidyl-serine to form a (2Xi,9S)-L-lysinoalanine cross-link.","definition_xrefs":["RESID:AA0123"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysinoalanine (obsolete GO:0018274)","termid":"GO:0018274"}


id: PBO:0050260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 38","termid":"PBO:0050260"}


id: PBO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 6","termid":"PBO:0070271"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_03794","SJAG_02341","SJAG_00436","SJAG_01556","SJAG_00173","SJAG_02419","SJAG_00552"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101054,114602],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[104072,105713,106399,109690,105814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: GO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alpha-2,8-linked polymer of sialic acid = CoA + polysialic acid acetylated at O-7 or O-9.","definition_xrefs":["MetaCyc:POLYSIALIC-ACID-O-ACETYLTRANSFERASE-RXN","EC:2.3.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polysialic-acid O-acetyltransferase activity","secondary_identifiers":["RHEA:11604"],"synonyms":[{"name":"acetyl-CoA:polysialic-acid O-acetyltransferase activity","type":"exact"}],"termid":"GO:0050208"}


id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: SO:0000359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing sequence that is flanked by Lox-P sites.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flanked","termid":"SO:0000357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"floxed","secondary_identifiers":["http://en.wikipedia.org/wiki/Floxed"],"termid":"SO:0000359"}


id: GO:0017118
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101296],"is_not":false,"summary":null,"term":"GO:0017118"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lipoyl-5'-AMP + L-lysyl-[lipoyl-carrier protein] = (R)-N6-lipoyl-L-lysyl-[lipoyl-carrier protein] + AMP + 2 H+.","definition_xrefs":["PMID:10103005","RHEA:20473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"lipoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017118","terms_by_termid":{"GO:0017118":null}}


id: PBO:0061704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 4","termid":"PBO:0061704"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: GO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"}


id: PBO:0070835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 14","termid":"PBO:0070835"}


id: PBO:0068955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 199, pseudogene","termid":"PBO:0068955"}


id: GO:0010858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium-dependent protein kinase, an enzyme which phosphorylates a protein in a calcium-dependent manner.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"}


id: PBO:0028791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028791"}


id: PBO:0056452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 4","termid":"PBO:0056452"}


id: PBO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase (predicted)","termid":"PBO:0001112"}


id: GO:1904022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["PMID:24732013","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor internalization","termid":"GO:0002092"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor internalization","termid":"GO:1904020"},{"relation_name":"positively_regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of G protein-coupled receptor internalization","synonyms":[{"name":"activation of G-protein coupled receptor internalization","type":"narrow"},{"name":"positive regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up-regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"upregulation of G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:1904022"}


id: PBO:0027902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript-derived_siRNA_level","termid":"PBO:0027902"}


id: PBO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Taf2 (predicted)","termid":"PBO:0000969"}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["GOC:hjd","Wikipedia:Exocyst","PMID:9700152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0006810","GO:0008150","GO:0140056","GO:0065003"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: GO:0097430
data:
  {"annotated_genes":["SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97559],"is_not":false,"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across an ascospore-type prospore membrane and into the cytosol.","definition_xrefs":["GOC:vw","PMID:21828039","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03079":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"copper ion import across prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper ion import into ascospore-type prospore","type":"related"},{"name":"copper ion transport into forespores","type":"related"}],"termid":"GO:0097430","terms_by_termid":{"GO:0097430":null}}


id: PBO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this may be a none coding RNA","termid":"PBO:0005863"}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: GO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:jid","GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into diapause","secondary_identifiers":["Wikipedia:Diapause"],"termid":"GO:0055115"}


id: PR:O94569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.12 gene.","definition_xrefs":["UniProtKB:O94569","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1773.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.12","synonyms":[{"name":"Spom972h-SPBC1773.12","type":"exact"}],"termid":"PR:O94569"}


id: GO:0071449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid hydroperoxide","termid":"GO:0006982"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to hydroperoxide","termid":"GO:0071447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipid hydroperoxide","synonyms":[{"name":"cellular response to LHPO","type":"exact"}],"termid":"GO:0071449"}


id: PBO:0063328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 4","termid":"PBO:0063328"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["PMID:11891195","GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: GO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link through a process of forming first an intermediate cysteine sulfenic acid by peroxide oxidation, followed by condensation with the alpha-amido of the following serine residue and the release of water.","definition_xrefs":["PMID:12802338","GOC:jid","PMID:12802339","RESID:AA0344"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-amino-3-isothiazolidinone-L-serine (obsolete GO:0048109)","termid":"GO:0048109"}


id: GO:0102873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:1-2-16:0-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:0-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:8066133","PMID:7948918","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.23","MetaCyc:RXN-8363"],"termid":"GO:0102873"}


id: GO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiogenesis","termid":"GO:0045765"}


id: GO:0071913
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87879],"is_not":false,"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:vw","GOC:mah","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylate secondary active transmembrane transporter activity","termid":"GO:0005371"},{"relation_name":"is_a","term_name":"citrate transmembrane transporter activity","termid":"GO:0015137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"citrate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate carrier activity","type":"exact"}],"termid":"GO:0071913","terms_by_termid":{"GO:0071913":null}}


id: GO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to tumor cell","termid":"GO:0002836"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"immune response to tumor cell","termid":"GO:0002418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immune response to tumor cell","synonyms":[{"name":"activation of immune response to tumor cell","type":"narrow"},{"name":"positive regulation of immune response to tumour cell","type":"exact"},{"name":"stimulation of immune response to tumor cell","type":"narrow"},{"name":"up regulation of immune response to tumor cell","type":"exact"},{"name":"up-regulation of immune response to tumor cell","type":"exact"},{"name":"upregulation of immune response to tumor cell","type":"exact"}],"termid":"GO:0002839"}


id: PBO:0075965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 6","termid":"PBO:0075965"}


id: PBO:0034090
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_paralogy_relationship_with","termid":"PBO:0034090"}


id: PATO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated blue","synonyms":[{"name":"bright blue","type":"related"}],"termid":"PATO:0001265"}


id: PBO:0077652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 1A","termid":"PBO:0077652"}


id: FYECO:0000179
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cysteine","synonyms":[{"name":"C added","type":"exact"},{"name":"Cys added","type":"exact"}],"termid":"FYECO:0000179"}


id: GO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming a pro-T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell lineage commitment","synonyms":[{"name":"pro-T cell fate commitment","type":"exact"},{"name":"pro-T lymphocyte fate commitment","type":"exact"},{"name":"pro-T lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002680"}


id: PBO:0083334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the characterized ORF BDF1/YLR399C","termid":"PBO:0083334"}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: GO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrofolate reduction (obsolete GO:0006762)","synonyms":[{"name":"dihydrofolate reduction","type":"exact"}],"termid":"GO:0006762"}


id: PATO:0002521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a funnel.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"funnel-shaped","termid":"PATO:0002521"}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PBO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 2","termid":"PBO:0044260"}


id: MOD:01172
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-alanyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["RESID:AA0424","PubMed:12626404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAla","type":"exact"},{"name":"LIPID GPI-like-anchor amidated alanine","type":"exact"},{"name":"N-alanyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01172"}


id: PBO:0071655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 19","termid":"PBO:0071655"}


id: GO:0018034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-alanine amide by hydrolysis and oxidation of an interior Ala-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0081"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-alanine amidation (obsolete GO:0018034)","termid":"GO:0018034"}


id: GO:1902979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979"}


id: PBO:0053561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 571","termid":"PBO:0053561"}


id: PBO:0027976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene","termid":"PBO:0027976"}


id: PBO:0042354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD96 molecule","termid":"PBO:0042354"}


id: GO:0071098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to the Src family tyrosine kinase Fyn.","definition_xrefs":["PMID:11684709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-Fyn complex","synonyms":[{"name":"ITGA6-ITGB4-FYN complex","type":"narrow"}],"termid":"GO:0071098"}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: GO:0046883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hormone secretion","termid":"GO:0046883"}


id: PBO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 subunit Bit61","termid":"PBO:0005564"}


id: GO:2000718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"is_a","term_name":"regulation of centromeric sister chromatid cohesion","termid":"GO:0070602"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000718"}


id: PBO:0088706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S10","termid":"PBO:0088706"}


id: PBO:0077095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoglobulin and mucin domain containing 4","termid":"PBO:0077095"}


id: GO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"vitamin D metabolic process","synonyms":[{"name":"calciferol metabolic process","type":"narrow"},{"name":"calciferol metabolism","type":"narrow"},{"name":"cholecalciferol metabolic process","type":"narrow"},{"name":"cholecalciferol metabolism","type":"narrow"},{"name":"ergocalciferol metabolic process","type":"narrow"},{"name":"ergocalciferol metabolism","type":"narrow"},{"name":"vitamin D metabolism","type":"exact"}],"termid":"GO:0042359"}


id: PBO:0062694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 5","termid":"PBO:0062694"}


id: FYPO:0004667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is normal (i.e. indistinguishable from wild type) at the centromeric regions during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic sister chromatid cohesion","termid":"FYPO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic sister chromatid cohesion at centromere","synonyms":[{"name":"normal meiotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"normal sister chromatid cohesion at centromere during meiosis","type":"exact"}],"termid":"FYPO:0004667"}


id: GO:0098893
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic endocytic zone membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone membrane","termid":"GO:0098844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"extrinsic component of postsynaptic endocytic zone","termid":"GO:0098893"}


id: PBO:0077645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 2","termid":"PBO:0077645"}


id: PBO:0039320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activating protein","termid":"PBO:0039320"}


id: FYPO:0003085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased replication fork arrest at mating-type locus","synonyms":[{"name":"decreased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at mating-type locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at mating-type locus","type":"exact"}],"termid":"FYPO:0003085"}


id: GO:0052877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and a copper protein is the acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, with a copper protein as acceptor","secondary_identifiers":["EC:1.4.9.-"],"termid":"GO:0052877"}


id: PBO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 3","termid":"PBO:0061099"}


id: PBO:0069863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1150, pseudogene","termid":"PBO:0069863"}


id: PBO:0044881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND6A divergent transcript","termid":"PBO:0044881"}


id: GO:0120043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle.","definition_xrefs":["GOC:krc","PMID:20170899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium shaft","termid":"GO:0120043"}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: FYPO:0000824
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115464,115466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115465,115467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"altered RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: abnormal","type":"related"},{"name":"abnormal RNA level","type":"exact"},{"name":"altered cellular RNA level","type":"exact"},{"name":"altered cellular mRNA level","type":"narrow"},{"name":"altered transcript level","type":"exact"}],"termid":"FYPO:0000824","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: GO:0047600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-abequose + D-mannosyl-L-rhamnosyl-D-galactose-1-diphospholipid = CDP + D-abequosyl-D-mannosyl-rhamnosyl-D-galactose-1-diphospholipid.","definition_xrefs":["MetaCyc:ABEQUOSYLTRANSFERASE-RXN","EC:2.4.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"abequosyltransferase activity","secondary_identifiers":["RHEA:34183"],"synonyms":[{"name":"CDP-abequose:D-mannosyl-L-rhamnosyl-D-galactose-1-diphospholipid D-abequosyltransferase activity","type":"related"},{"name":"trihexose diphospholipid abequosyltransferase activity","type":"related"}],"termid":"GO:0047600"}


id: PBO:0067673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 854, pseudogene","termid":"PBO:0067673"}


id: FYPO:0003720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the 2'-O-methylation of a nucleotide residue does not occur at a specific site in an rRNA molecule that is normally modified.","definition_xrefs":["PomBase:mah","PMID:17222800","GO:0000452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation abolished at specific site","termid":"FYPO:0003720"}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_03073","SJAG_04003","SJAG_04387","SJAG_02509","SJAG_03673","SJAG_02737","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97517,100093,103495,105686,108197,110018,112996],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["PMID:16611238","GOC:vw","PMID:11309419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: PR:Q9UUE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.03c","secondary_identifiers":["UniProtKB:Q9UUE6"],"synonyms":[{"name":"LysRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KARS","type":"exact"},{"name":"lysyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE6"}


id: PBO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_plus-end_during_mitotic_interphase","termid":"PBO:0035699"}


id: PBO:0091354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone chaperone Scm3","termid":"PBO:0091354"}


id: PBO:0089250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor, Noc1 related","termid":"PBO:0089250"}


id: GO:0035095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a nicotine stimulus.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to nicotine","termid":"GO:0035094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to nicotine","synonyms":[{"name":"behavioural response to nicotine","type":"exact"}],"termid":"GO:0035095"}


id: GO:1903193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquarterpene.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:21627333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"sesquarterpene metabolic process","termid":"GO:1903192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquarterpene biosynthetic process","synonyms":[{"name":"sesquarterpene anabolism","type":"exact"},{"name":"sesquarterpene biosynthesis","type":"exact"},{"name":"sesquarterpene formation","type":"exact"},{"name":"sesquarterpene synthesis","type":"exact"}],"termid":"GO:1903193"}


id: PBO:0045589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4","termid":"PBO:0045589"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["GOC:go_curators","Pfam:PF00017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: CHEBI:30812
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron dichloride","termid":"CHEBI:30812"}


id: GO:1990103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing DNA-bound DnaA attached to HU. HU is a dimer encoded by two closely related genes. Essential for the initiation of replication in bacteria; stimulates the DnaA-dependent unwinding of oriC.","definition_xrefs":["PMID:18179598","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"DnaA-HU complex","synonyms":[{"name":"DnaA-HU-DNA complex","type":"exact"}],"termid":"GO:1990103"}


id: PR:O74921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C757.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.11c","synonyms":[{"name":"Spom972h-SPCC757.11c","type":"exact"}],"termid":"PR:O74921"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04340","PANTHER:PTHR23427:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: PBO:0078892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-1","termid":"PBO:0078892"}


id: PBO:0029088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029088"}


id: GO:1904415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenophagy.","definition_xrefs":["PMID:21617041","GOC:PARL","GOC:TermGenie","GOC:pad","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"xenophagy","termid":"GO:0098792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"regulation of xenophagy","termid":"GO:1904415"}


id: GO:0103023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ITP + H2O = IDP + H+ + phosphate.","definition_xrefs":["GOC:pz","PMID:16216582","RHEA:28330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ITPase activity","secondary_identifiers":["EC:3.6.1.73","MetaCyc:RXN0-5073"],"termid":"GO:0103023"}


id: GO:0010156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of sporocyte, the haploid spores of angiosperms which are initiated by the differentiation of a subset of floral cells into sporocytes, which then undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["PMID:10465788"],"gene_count":0,"genotype_count":0,"name":"obsolete sporocyte morphogenesis (obsolete GO:0010156)","synonyms":[{"name":"sporocyte morphogenesis","type":"exact"}],"termid":"GO:0010156"}


id: GO:0047295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate = 2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate + diphosphate.","definition_xrefs":["EC:2.5.1.42","RHEA:18109","PMID:15356000","PMID:16494480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"geranylgeranylglycerol-phosphate geranylgeranyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04520","MetaCyc:2.5.1.42-RXN"],"synonyms":[{"name":"(S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase activity","type":"exact"},{"name":"geranylgeranyl diphosphate:sn-3-O-(geranylgeranyl)glycerol 1-phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyloxyglycerol phosphate geranylgeranyltransferase activity","type":"related"},{"name":"geranylgeranyltransferase II","type":"related"}],"termid":"GO:0047295"}


id: PR:Q9HDU3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gal10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional protein gal10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.12c","synonyms":[{"name":"Spom972h-gal10","type":"exact"}],"termid":"PR:Q9HDU3"}


id: GO:0030739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + O-demethylpuromycin = S-adenosyl-L-homocysteine + puromycin.","definition_xrefs":["EC:2.1.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"O-demethylpuromycin O-methyltransferase activity","secondary_identifiers":["RHEA:22280","MetaCyc:2.1.1.38-RXN"],"synonyms":[{"name":"O-demethylpuromycin methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:O-demethylpuromycin O-methyltransferase activity","type":"related"}],"termid":"GO:0030739"}


id: GO:0050522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces a known acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other known acceptors","secondary_identifiers":["EC:1.20.98.-"],"termid":"GO:0050522"}


id: PBO:0079443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 1","termid":"PBO:0079443"}


id: GO:0140961
data:
  {"annotated_genes":["SJAG_04516","SJAG_02599","SJAG_01344","SJAG_00988","SJAG_03497","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89396,93467,104496,114219,93112,93151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a metal ion.","definition_xrefs":["PMID:26729300","PMID:33046888","PMID:34442707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of metal ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular detoxification of metal cation","type":"exact"}],"termid":"GO:0140961","terms_by_termid":{"GO:0098849":null}}


id: PBO:0086020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086020"}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: PBO:0076325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYP antisense RNA 1","termid":"PBO:0076325"}


id: PBO:0016895
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KNS1","termid":"PBO:0016895"}


id: PBO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 6","termid":"PBO:0061115"}


id: GO:0009413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating flooding, short-term immersion in water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flooding","termid":"GO:0009413"}


id: GO:0002555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a platelet or group of platelets.","definition_xrefs":["GOC:add","PMID:9117517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"platelet degranulation","termid":"GO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"histamine secretion by platelet","termid":"GO:0002555"}


id: GO:1990887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol + S-adenosyl-L-methionine = ubiquinol-n + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol O-methyltransferase activity (obsolete GO:1990887)","termid":"GO:1990887"}


id: GO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"negative regulation of B cell apoptotic process","termid":"GO:0002903"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell deletion","synonyms":[{"name":"down regulation of B cell deletion","type":"exact"},{"name":"down-regulation of B cell deletion","type":"exact"},{"name":"downregulation of B cell deletion","type":"exact"},{"name":"inhibition of B cell deletion","type":"narrow"},{"name":"negative regulation of B lymphocyte deletion","type":"exact"},{"name":"negative regulation of B-cell deletion","type":"exact"},{"name":"negative regulation of B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002868"}


id: GO:0048539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone marrow development","termid":"GO:0048539"}


id: FYPO:0004705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic sister chromatid separation","synonyms":[{"name":"delayed mitotic sister chromatid separation","type":"exact"},{"name":"delayed onset of mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"delayed onset of sister chromatid separation during mitosis","type":"exact"},{"name":"delayed onset of sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004705"}


id: PBO:0086928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration; regulated via allosteric activation by fructose bisphosphate; CDC19 has a paralog, PYK2, that arose from the whole genome duplication","termid":"PBO:0086928"}


id: GO:0015443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out).","definition_xrefs":["EC:3.6.3.15"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-transporting two-sector ATPase activity (obsolete GO:0015443)","synonyms":[{"name":"sodium-transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:0015443"}


id: GO:0060046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of acrosome reaction","termid":"GO:0060046"}


id: GO:0031895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1B vasopressin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"V1B vasopressin receptor binding","synonyms":[{"name":"V1B vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031895"}


id: PBO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 4","termid":"PBO:0048521"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: PBO:0067707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 5","termid":"PBO:0067707"}


id: PBO:0078770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-2","termid":"PBO:0078770"}


id: PBO:0112275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA leakage protein Rsm1","termid":"PBO:0112275"}


id: PBO:0079930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocanate hydratase 1","termid":"PBO:0079930"}


id: PBO:0064547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 9, pseudogene","termid":"PBO:0064547"}


id: GO:0033130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an acetylcholine receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor binding","termid":"GO:0033130"}


id: PBO:0026836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)_polymerase_activity","termid":"PBO:0026836"}


id: PBO:0031235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_horsetail_movement","termid":"PBO:0031235"}


id: GO:1900960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"negatively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"down regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"down-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"downregulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"inhibition of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"inhibition of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"negative regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900960"}


id: SO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_to_gene_feature","synonyms":[{"name":"gene to gene feature","type":"exact"}],"termid":"SO:0000067"}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: PBO:0077016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS3 antisense RNA 1","termid":"PBO:0077016"}


id: GO:0008123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADPH + H+ + O2 = 7-alpha-hydroxycholesterol + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cholesterol 7-alpha-monooxygenase activity","secondary_identifiers":["RHEA:21812","MetaCyc:CHOLESTEROL-7-ALPHA-MONOOXYGENASE-RXN","Reactome:R-HSA-192051"],"synonyms":[{"name":"cholesterol 7-alpha-hydroxylase activity","type":"exact"},{"name":"cholesterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating)","type":"related"},{"name":"cytochrome P450 CYP7A1","type":"narrow"}],"termid":"GO:0008123"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: PATO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A single physical entity inhering in an bearer by virtue of the bearer's quantities or relative ratios of subparts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composition","secondary_identifiers":["PATO:0002015"],"synonyms":[{"name":"composed of","type":"exact"},{"name":"compositionality","type":"exact"},{"name":"content","type":"exact"},{"name":"structure, composition","type":"exact"}],"termid":"PATO:0000025"}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: GO:1904358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance via telomere lengthening.","definition_xrefs":["GOC:nc","PMID:23959892","GOC:BHF","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomere lengthening","termid":"GO:1904356"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via telomere lengthening","synonyms":[{"name":"activation of telomere maintenance via telomere lengthening","type":"narrow"},{"name":"up regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"up-regulation of telomere maintenance via telomere lengthening","type":"exact"},{"name":"upregulation of telomere maintenance via telomere lengthening","type":"exact"}],"termid":"GO:1904358"}


id: GO:0045176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, apical regions of the cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"apical protein localization","synonyms":[{"name":"apical protein localisation","type":"exact"},{"name":"establishment and maintenance of apical protein localization","type":"exact"},{"name":"establishment and maintenance of protein localization in apical part of cell","type":"exact"}],"termid":"GO:0045176"}


id: PBO:0073027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scribble planar cell polarity protein","termid":"PBO:0073027"}


id: FYPO:0000653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects DNA binding. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"DNA binding phenotype","synonyms":[{"name":"fission yeast DNA binding phenotype","type":"exact"}],"termid":"FYPO:0000653"}


id: PBO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi5 complex subunit Swi2","termid":"PBO:0002146"}


id: GO:0009155
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"deoxyribonucleotide catabolic process","termid":"GO:0009264"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide breakdown","type":"exact"},{"name":"purine deoxyribonucleotide catabolism","type":"exact"},{"name":"purine deoxyribonucleotide degradation","type":"exact"}],"termid":"GO:0009155","terms_by_termid":{"GO:0035863":null}}


id: GO:1902309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-serine dephosphorylation.","definition_xrefs":["GOC:TermGenie","PMID:11953308","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein dephosphorylation","termid":"GO:0035308"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine dephosphorylation","termid":"GO:1902308"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine dephosphorylation","synonyms":[{"name":"down regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"downregulation of peptidyl-serine dephosphorylation","type":"exact"},{"name":"inhibition of peptidyl-serine dephosphorylation","type":"narrow"}],"termid":"GO:1902309"}


id: PBO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 50, NatE catalytic subunit","termid":"PBO:0060413"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["EC:6.4.1.6","RHEA:18385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05735","MetaCyc:6.4.1.6-RXN"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: PBO:0110347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5RAP3 pseudogene 1","termid":"PBO:0110347"}


id: PBO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11","termid":"PBO:0090071"}


id: PBO:0074325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1","termid":"PBO:0074325"}


id: GO:0019068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.","definition_xrefs":["ISBN:0121585336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion assembly","secondary_identifiers":["GO:0042963"],"synonyms":[{"name":"bacteriophage assembly","type":"narrow"},{"name":"phage assembly","type":"narrow"},{"name":"viral assembly","type":"exact"},{"name":"viral particle assembly","type":"exact"},{"name":"virion assembly and maintenance","type":"exact"},{"name":"virion organization","type":"exact"},{"name":"virus assembly","type":"exact"},{"name":"virus particle assembly","type":"exact"}],"termid":"GO:0019068"}


id: GO:0007253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of NF-kappaB transcription factor activity","termid":"GO:0032088"},{"relation_name":"is_a","term_name":"cytoplasmic sequestering of transcription factor","termid":"GO:0042994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0051179","GO:0010467"],"is_obsolete":false,"name":"cytoplasmic sequestering of NF-kappaB","synonyms":[{"name":"cytoplasmic NF-kappaB retention","type":"exact"},{"name":"cytoplasmic NF-kappaB sequestration","type":"exact"},{"name":"cytoplasmic NF-kappaB storage","type":"exact"},{"name":"cytoplasmic retention of NF-kappaB","type":"exact"},{"name":"cytoplasmic sequestration of NF-kappaB","type":"exact"},{"name":"cytoplasmic storage of NF-kappaB","type":"exact"},{"name":"maintenance of NF-kappaB location in cytoplasm","type":"exact"}],"termid":"GO:0007253"}


id: GO:0097571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two nuclei found in Giardia species (trophozoite stage). It is located on the left side of the cell when viewed from the dorsal side.","definition_xrefs":["ISBN:0-444-81258-X","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"left nucleus","termid":"GO:0097571"}


id: GO:0005983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of starch, the most important reserve polysaccharide in plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch metabolic process","termid":"GO:0005982"},{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"starch catabolic process","secondary_identifiers":["MetaCyc:PWY-842"],"synonyms":[{"name":"starch breakdown","type":"exact"},{"name":"starch catabolism","type":"exact"},{"name":"starch degradation","type":"exact"}],"termid":"GO:0005983"}


id: PBO:0017775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Nst1","termid":"PBO:0017775"}


id: PBO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.10","termid":"PBO:0004485"}


id: GO:0033889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 3-sulfate groups of the N-sulfo-D-glucosamine 3-O-sulfate units of heparin.","definition_xrefs":["EC:3.1.6.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-sulfoglucosamine-3-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.15-RXN"],"synonyms":[{"name":"N-sulfo-3-sulfoglucosamine 3-sulfohydrolase activity","type":"related"},{"name":"chondroitinsulfatase activity","type":"broad"}],"termid":"GO:0033889"}


id: PBO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 35","termid":"PBO:0046241"}


id: GO:0060518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells from one site to another contributing to the elongation of the primary prostatic bud.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"primary prostatic bud elongation","termid":"GO:0060516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in prostatic bud elongation","termid":"GO:0060518"}


id: PBO:0077321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59 like","termid":"PBO:0077321"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: GO:0035715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 2.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 2 binding","synonyms":[{"name":"CCL2 binding","type":"exact"}],"termid":"GO:0035715"}


id: GO:0006803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione conjugation reaction (obsolete GO:0006803)","synonyms":[{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0006803"}


id: FYPO:0005727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which deactivation of the mitotic spindle assembly checkpoint occurs more slowly than normal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PMID:21664573","PomBase:mah","PMID:19592249","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"decreased rate of deactivation of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased rate of deactivation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint deactivation","type":"exact"},{"name":"decreased rate of mitotic spindle assembly checkpoint silencing","type":"exact"},{"name":"delayed inactivation of the SAC","type":"broad"},{"name":"delayed inactivation of the mitotic SAC","type":"exact"},{"name":"delayed inactivation of the mitotic spindle assembly checkpoint","type":"exact"},{"name":"reduced rate of deactivation of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005727"}


id: PBO:0083859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD pyrophosphatase; hydrolyzes FAD as the preferred substrate but also acts on NADH and ADP-ribose at lower rates; activity is dependent upon K+ and divalent metal cations; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and nucleus; FPY1 is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0083859"}


id: FYPO:0002639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is greater than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:22065639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"increased distance between mitotic kinetochores","type":"related"},{"name":"increased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"increased interkinetochore distance before anaphase onset","type":"exact"},{"name":"increased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"increased sister kinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0002639"}


id: GO:0009955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial pattern specification","synonyms":[{"name":"adaxial/abaxial pattern formation","type":"related"}],"termid":"GO:0009955"}


id: PBO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AI member 1 pseudogene","termid":"PBO:0061970"}


id: PBO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ2 antisense RNA 1","termid":"PBO:0052206"}


id: PBO:0071680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 12","termid":"PBO:0071680"}


id: PR:P87158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps401 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.08","synonyms":[{"name":"Spom972h-rps401","type":"exact"}],"termid":"PR:P87158"}


id: FYPO:0001866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal adenylyl cyclase activity","synonyms":[{"name":"normal adenylate cyclase activity","type":"exact"}],"termid":"FYPO:0001866"}


id: GO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgA isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"IgA receptor activity","termid":"GO:0019766"}


id: PBO:0085483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable subtilisin-family protease; role in formation of the dityrosine layer of spore walls; localizes to the spore wall and also the nuclear envelope and ER region in mature spores","termid":"PBO:0085483"}


id: PBO:0057243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 448","termid":"PBO:0057243"}


id: PATO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000160 relative incidence (obsolete PATO:0000160)","termid":"PATO:0000160"}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["PMID:22588719","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: GO:0008550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An intrinsic activity of alpha-tubulin involved in tubulin folding, division plane formation in prokaryotic cells and others.","definition_xrefs":["MetaCyc:3.6.1.51-RXN","EC:3.6.5.6"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin GTPase activity (obsolete GO:0008550)","synonyms":[{"name":"tubulin GTPase activity","type":"exact"}],"termid":"GO:0008550"}


id: GO:0098724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Symmetric division of a stem cell to produce two stem cells of the same type as the parent. Symmetric stem cell division is necessary for amplification of stem cell populations in the absence of sources of stem cells external to an existing population.","definition_xrefs":["PMID:19948499","PMID:23303905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"is_a","term_name":"symmetric cell division","termid":"GO:0098725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric stem cell division","termid":"GO:0098724"}


id: PBO:0081576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 503","termid":"PBO:0081576"}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02383","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86904,87772],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN","EC:2.7.7.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14785","Reactome:R-HSA-8941312"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: GO:0102864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-18:2-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:3-2-18:2-phosphatidylcholine desaturase activity","secondary_identifiers":["MetaCyc:RXN-8331"],"termid":"GO:0102864"}


id: GO:0070130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial translation","synonyms":[{"name":"negative regulation of mitochondrial protein anabolism","type":"exact"},{"name":"negative regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"negative regulation of mitochondrial protein formation","type":"exact"},{"name":"negative regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070130"}


id: GO:0048499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle.","definition_xrefs":["GOC:jl","GOC:mah","PMID:10620806","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"synaptic vesicle membrane organization","synonyms":[{"name":"SLMV biogenesis","type":"narrow"},{"name":"synaptic vesicle membrane organisation","type":"exact"},{"name":"synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:0048499"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: PBO:0050917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 3","termid":"PBO:0050917"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: GO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of posterior gap gene expression mediated largely by the effects of other gap genes; in insects this is exemplified by hunchback and tailless repression of knirps.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of posterior gap gene boundaries (obsolete GO:0007361)","termid":"GO:0007361"}


id: PATO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001123 relative power value (obsolete PATO:0001123)","termid":"PATO:0001123"}


id: PBO:0039986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1","termid":"PBO:0039986"}


id: PBO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 87","termid":"PBO:0071085"}


id: GO:0048461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the flower. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower structural organization","secondary_identifiers":["GO:0048412"],"synonyms":[{"name":"flower structural organisation","type":"exact"}],"termid":"GO:0048461"}


id: GO:0033046
data:
  {"annotated_genes":["SJAG_01837","SJAG_00883","SJAG_04999","SJAG_01330","SJAG_01679","SJAG_04259","SJAG_04126","SJAG_02451","SJAG_02169","SJAG_03681","SJAG_01297","SJAG_01082","SJAG_03126","SJAG_04699","SJAG_03353","SJAG_00460","SJAG_02336","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111957,109851,99975,95669,103298,110330,86843,108022,104320],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[97876,110559,95517,112729,86845,102377,109855,105977,111606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102378,111607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90299],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112733],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90300],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid segregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid segregation","termid":"GO:0033045"},{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033046","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:2000816":null}}


id: GO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a CD8-positive, alpha-beta T cell population by cell division.","definition_xrefs":["GOC:BHF","CL:0000625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}


id: PBO:0056778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 27","termid":"PBO:0056778"}


id: PBO:0042944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline O-acetyltransferase","termid":"PBO:0042944"}


id: GO:0032823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell differentiation","synonyms":[{"name":"regulation of NK cell differentiation","type":"exact"},{"name":"regulation of natural killer cell development","type":"related"}],"termid":"GO:0032823"}


id: PBO:0064942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease associated domain containing 1","termid":"PBO:0064942"}


id: GO:0015141
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97741],"is_not":false,"summary":null,"term":"GO:0015141"},{"annotations":[97742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"succinate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015141","terms_by_termid":{"GO:0015141":null,"GO:0097434":null}}


id: FYPO:0003055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is delayed at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PomBase:mah","PMID:23117617","PMID:24173580","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of homologous chromosome pairing","termid":"FYPO:0003026"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"delayed homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"delayed onset of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"delayed onset of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003055"}


id: PBO:0047797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box H1","termid":"PBO:0047797"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


id: GO:0061677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate = pyruvate + D-glyceraldehyde.","definition_xrefs":["RHEA:35583","PMID:12824170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconate aldolase activity","secondary_identifiers":["MetaCyc:DHDOGALDOL-RXN","GO:0043725","EC:4.1.2.51"],"synonyms":[{"name":"2-keto-3-deoxygluconate aldolase activity","type":"exact"},{"name":"KDG aldolase activity","type":"exact"}],"termid":"GO:0061677"}


id: PBO:0055473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2906","termid":"PBO:0055473"}


id: PBO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc11","termid":"PBO:0000805"}


id: PBO:0056490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated zinc finger protein","termid":"PBO:0056490"}


id: MOD:00440
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a palmitoyl group.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"palmitoylated residue","synonyms":[{"name":"Hexadecanoylated residue","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"exact"},{"name":"PamRes","type":"exact"}],"termid":"MOD:00440"}


id: PBO:0080380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS11 divergent transcript","termid":"PBO:0080380"}


id: GO:0032404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mismatch repair complex binding","termid":"GO:0032404"}


id: GO:0097391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 13 (CXCL13) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 13 production","synonyms":[{"name":"CXCL13 production","type":"exact"}],"termid":"GO:0097391"}


id: PBO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 3","termid":"PBO:0050803"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0004672","GO:0016740","GO:0038023","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PBO:0088682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85b","termid":"PBO:0088682"}


id: GO:2000850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of corticosteroid hormone secretion","termid":"GO:2000847"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"}


id: GO:0141078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a RIG-I signaling pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19936053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host receptor-mediated signal transduction","termid":"GO:0075111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host RIG-I signaling pathway","synonyms":[{"name":"disruption of host RIG-1 signaling pathway","type":"exact"},{"name":"disruption of host RIG-I signaling pathway","type":"exact"}],"termid":"GO:0141078"}


id: PBO:0077455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 5","termid":"PBO:0077455"}


id: GO:0033030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil apoptotic process","synonyms":[{"name":"down regulation of neutrophil apoptosis","type":"exact"},{"name":"down-regulation of neutrophil apoptosis","type":"exact"},{"name":"downregulation of neutrophil apoptosis","type":"exact"},{"name":"inhibition of neutrophil apoptosis","type":"narrow"},{"name":"negative regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033030"}


id: PBO:0017060
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biased repeat containing protein - 6 copies of 'WKKAREEDKAE' repeat and 6 copies of a smaller 'WRNSMDE' repeat","termid":"PBO:0017060"}


id: PBO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_S_phase_progression","termid":"PBO:0031605"}


id: GO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin-3-O-D-rhamnosyl-(1,6)-D-glucoside + UDP-D-glucose = cyanidin-3-O-[D-rhamnosyl-(1,6)-D-glucoside]-5-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.116-RXN","EC:2.4.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyanidin-3-rhamnosylglucoside 5-O-glucosyltransferase activity","secondary_identifiers":["RHEA:12144"],"synonyms":[{"name":"UDP-glucose:cyanidin-3-O-D-rhamnosyl-1,6-D-glucoside 5-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-beta-L-rhamnosyl-(1->6)-beta-D-glucoside 5-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"cyanidin-3-O-rutinoside 5-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cyanidin 3-rhamnosylglucoside 5-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047214"}


id: PBO:0069156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 408, pseudogene","termid":"PBO:0069156"}


id: GO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of APC-Cdc20 complex activity regulating the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of APC-Cdc20 complex activity (obsolete GO:0060565)","synonyms":[{"name":"inhibition of APC activity during mitotic cell cycle","type":"exact"},{"name":"inhibition of APC-Cdc20 complex activity","type":"exact"},{"name":"inhibition of APC/C activity during mitotic cell cycle","type":"related"},{"name":"inhibition of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"inhibition of mitotic anaphase-promoting complex activity","type":"related"}],"termid":"GO:0060565"}


id: PBO:0082215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 4 subunit of the 20S proteasome; may replace alpha 3 subunit (Pre9p) under stress conditions to create a more active proteasomal isoform; GFP-fusion protein relocates from cytosol to the mitochondrial surface upon oxidative stress","termid":"PBO:0082215"}


id: FYPO:0002406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, contains one or more septa, and is curved along the long axis, and the cell diameter is larger than normal and the cell length is shorter than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"viable curved stubby vegetative cell","termid":"FYPO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"viable curved stubby septated vegetative cell","synonyms":[{"name":"curved stubby septated viable cell","type":"exact"},{"name":"viable curved stubby septated cell during vegetative growth","type":"exact"},{"name":"viable curved stubby septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable curved watermelon-shaped septated vegetative cell","type":"exact"}],"termid":"FYPO:0002406"}


id: PBO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase (predicted)","termid":"PBO:0002083"}


id: GO:1990792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glial cell derived neurotrophic factor stimulus.","definition_xrefs":["PMID:20877310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to glial cell derived neurotrophic factor","termid":"GO:1990790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glial cell derived neurotrophic factor","synonyms":[{"name":"cellular response to ATF","type":"exact"},{"name":"cellular response to GDNF","type":"exact"},{"name":"cellular response to astrocyte-derived trophic factor","type":"exact"}],"termid":"GO:1990792"}


