# terms

id: GO:0102038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrobenzyl alcohol + O2 = 4-nitrobenzaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-nitrobenzyl alcohol oxidase activity","secondary_identifiers":["MetaCyc:R362-RXN"],"termid":"GO:0102038"}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044866"},{"relation_name":"is_a","term_name":"negative regulation by host of symbiont catalytic activity","termid":"GO:0052403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044869"}


id: FYPO:0003781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the nuclear envelope is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear envelope morphology","termid":"FYPO:0003751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear envelope morphology during mitotic interphase","synonyms":[{"name":"normal nuclear envelope morphology during interphase during vegetative growth","type":"exact"},{"name":"normal nuclear envelope morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"normal nuclear membrane morphology during mitotic interphase","type":"narrow"}],"termid":"FYPO:0003781"}


id: SO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small nucleolar RNAs (snoRNAs) are short non-coding RNAs enriched in the nucleolus as components of small nucleolar ribonucleoproteins. They guide ribose methylation and pseudouridylation of rRNAs and snRNAs, and a subgroup regulate excision of rRNAs from rRNA precursor transcripts. snoRNAs may also guide rRNA acetylation and tRNA methylation, and regulate mRNA abundance and alternative splicing.","definition_xrefs":["GOC:kgc","PMID:31828325"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:snoRNA","type":"exact"},{"name":"small nucleolar RNA","type":"exact"}],"termid":"SO:0000275"}


id: PBO:0070199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 124 pseudogene","termid":"PBO:0070199"}


id: FYPO:0006640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body during anaphase B","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body during anaphase B","type":"exact"},{"name":"abnormal protein localization to mitotic SPB during anaphase B","type":"exact"},{"name":"abnormal protein localization to spindle pole body during anaphase B during vegetative growth","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006640"}


id: GO:1902990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in mitotic cell cycle.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0032200","GO:0007049"],"is_obsolete":false,"name":"mitotic telomere maintenance via semi-conservative replication","synonyms":[{"name":"equal telomere replication involved in mitotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in mitotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in mitotic cell cycle","type":"narrow"}],"termid":"GO:1902990"}


id: GO:0045139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete copper sensitivity/resistance (obsolete GO:0045139)","synonyms":[{"name":"copper sensitivity/resistance","type":"exact"}],"termid":"GO:0045139"}


id: PBO:0071164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 3","termid":"PBO:0071164"}


id: PBO:0079776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose glycoprotein glucosyltransferase 1","termid":"PBO:0079776"}


id: GO:0015780
data:
  {"annotated_genes":["SJAG_04406","SJAG_01177","SJAG_01960","SJAG_00339","SJAG_04697","SJAG_00434","SJAG_04162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[85116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[84520,111616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[108437,111617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[65669,101041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00339":null,"SJAG_00434":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide-sugar transport","type":"related"}],"termid":"GO:0015780","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:1990407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcitonin gene-related peptide (CGRP).","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family binding","termid":"GO:0097644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcitonin gene-related peptide binding","synonyms":[{"name":"CGRP polypeptide binding","type":"exact"},{"name":"calcitonin-gene-related peptide binding","type":"exact"},{"name":"calcitonin-gene-related polypeptide binding","type":"exact"}],"termid":"GO:1990407"}


id: GO:0010177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-4-methylthiobutanoate + acetyl-CoA + H2O = 2-(2'-methylthio)ethylmalic-acid + coenzyme A + H+.","definition_xrefs":["MetaCyc:RXN-2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"2-(2'-methylthio)ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.17"],"synonyms":[{"name":"methylthioalkylmalate synthase activity","type":"broad"}],"termid":"GO:0010177"}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: PBO:0044473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 2","termid":"PBO:0044473"}


id: PBO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 20","termid":"PBO:0075164"}


id: GO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + peptide = CoA + N-alpha-propionylpeptide. This reaction is the propionylation of the N-terminal amino acid residue of a peptide or protein.","definition_xrefs":["GOC:dph","PMID:23043182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"peptide alpha-N-propionyltransferase activity","synonyms":[{"name":"N-terminal propionyltransferase activity","type":"exact"}],"termid":"GO:0061607"}


id: PBO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19A","termid":"PBO:0044739"}


id: GO:0005851
data:
  {"annotated_genes":["SJAG_02471","SJAG_01659","SJAG_01576","SJAG_02307","SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88867,92764,93907,96577,110045],"is_not":false,"summary":null,"term":"GO:0005851"}]},"cv_name":"cellular_component","definition":"A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon.","definition_xrefs":["PMID:9438375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01576":null,"SJAG_01659":null,"SJAG_02307":null,"SJAG_02471":null,"SJAG_03678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-2B","type":"exact"},{"name":"eif2B","type":"exact"}],"termid":"GO:0005851","terms_by_termid":{"GO:0005851":null}}


id: SO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III. This promoter is intragenic and includes an A box, an intermediate element, and a C box. This is well conserved in the 5s rRNA promoters across species.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_1","synonyms":[{"name":"RNApol III promoter type 1","type":"exact"}],"termid":"SO:0000617"}


id: PBO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blt1","termid":"PBO:0003844"}


id: PBO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 3","termid":"PBO:0060695"}


id: PBO:0068231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 2","termid":"PBO:0068231"}


id: GO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cilium","termid":"GO:0061512"}


id: GO:0086077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an AV node cell to a bundle of His cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrioventricular node cell-bundle of His cell electrical coupling","type":"exact"}],"termid":"GO:0086077"}


id: PBO:0068199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 506","termid":"PBO:0068199"}


id: PBO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 11","termid":"PBO:0062131"}


id: PBO:0028881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation","termid":"PBO:0028881"}


id: PBO:0063632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 10","termid":"PBO:0063632"}


id: PBO:0068289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEK-C17orf49 readthrough","termid":"PBO:0068289"}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: GO:0098691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses dopamine as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dopaminergic synapse","termid":"GO:0098691"}


id: PBO:0079789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A10","termid":"PBO:0079789"}


id: PBO:0058558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6500","termid":"PBO:0058558"}


id: PATO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001084 relative acceleration value (obsolete PATO:0001084)","termid":"PATO:0001084"}


id: SO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A joining gene that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_gene","synonyms":[{"name":"IG_joining_gene","type":"exact"},{"name":"Immunoglobulin_Joining_Gene","type":"exact"},{"name":"immunoglobulin_J_gene","type":"exact"}],"termid":"SO:0002125"}


id: PBO:0054119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1485","termid":"PBO:0054119"}


id: PBO:0038622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 3","termid":"PBO:0038622"}


id: GO:0007603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"is_a","term_name":"detection of visible light","termid":"GO:0009584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction, visible light","synonyms":[{"name":"visual cascade","type":"exact"},{"name":"visual transduction","type":"exact"}],"termid":"GO:0007603"}


id: PBO:0055679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase H","termid":"PBO:0055679"}


id: GO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracyclic triterpenoid compounds, terpenoids with six isoprene units and 4 carbon rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetracyclic triterpenoid metabolic process","synonyms":[{"name":"tetracyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0010685"}


id: PBO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Sck2","termid":"PBO:0002818"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: PBO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.14","termid":"PBO:0000867"}


id: PBO:0084078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein that couples the Ski complex and exosome; putative pseudo-translational GTPase involved in 3'-to-5' mRNA decay pathway; interacts with both the cytoplasmic exosome and the Ski complex; eRF3-like domain targets nonstop mRNA for degradation; null mutants have a superkiller phenotype; SKI7 has a paralog, HBS1, that arose from the whole genome duplication","termid":"PBO:0084078"}


id: GO:0050217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyhexan-3-one = 2 propanal.","definition_xrefs":["RHEA:11100","EC:4.1.2.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"propioin synthase activity","secondary_identifiers":["MetaCyc:PROPIOIN-SYNTHASE-RXN","KEGG_REACTION:R00038"],"synonyms":[{"name":"4-hydroxy-3-hexanone aldolase activity","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase (propanal-forming)","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase activity","type":"related"}],"termid":"GO:0050217"}


id: GO:1905932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","PMID:25089138","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905917"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905930"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","termid":"GO:1905420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of VSMC differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"activation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"positive regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"positive regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"up-regulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"upregulation of vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905932"}


id: GO:0015782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of CMP-N-acetylneuraminate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate transmembrane transport","synonyms":[{"name":"CMP-N-acetylneuraminate transport","type":"related"},{"name":"CMP-sialic acid transport","type":"broad"}],"termid":"GO:0015782"}


id: GO:1904139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:19100238","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell migration","termid":"GO:1904139"}


id: PBO:0035889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_processing_during_vegetative_growth","termid":"PBO:0035889"}


id: PBO:0059105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 1","termid":"PBO:0059105"}


id: PBO:0029910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_level","termid":"PBO:0029910"}


id: GO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the single stranded telomeric 3' overhang, a conserved feature that ranges in length from 12 nt in budding yeast to approximately 500 nt in humans.","definition_xrefs":["PMID:16096639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomeric 3' overhang formation","synonyms":[{"name":"telomere 3'-end processing","type":"exact"},{"name":"telomere end processing","type":"related"}],"termid":"GO:0031860"}


id: PBO:0053568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 583","termid":"PBO:0053568"}


id: FYPO:0005810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase, re-entering the cell cycle phase from which it entered G0 (G1 or G2). Cell length is normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell","termid":"FYPO:0005566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0005568","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"T-shaped cell during recovery from quiescence","synonyms":[{"name":"T-shaped cell during cell cycle re-entry","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence","type":"exact"},{"name":"T-shaped cell during recovery from stationary phase","type":"related"},{"name":"T-shaped cell during transition from cell quiescence","type":"exact"},{"name":"cell morphology, T shaped during recovery from quiescence","type":"exact"}],"termid":"FYPO:0005810"}


id: FYPO:0000261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. Multiple different phenotypes due to a single mutation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pleiotropic effects (obsolete FYPO:0000261)","synonyms":[{"name":"pleiotropic effects during vegetative growth","type":"exact"}],"termid":"FYPO:0000261"}


id: PBO:0075906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6","termid":"PBO:0075906"}


id: PR:O43043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element-binding protein cleavage-activating protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.15c","synonyms":[{"name":"SCAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SREBP cleavage-activating protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-scp1","type":"exact"}],"termid":"PR:O43043"}


id: PBO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrof olatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0011151"}


id: PBO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug95","termid":"PBO:0016975"}


id: PR:O74786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec9 gene.","definition_xrefs":["UniProtKB:O74786","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.02c","synonyms":[{"name":"Spom972h-sec9","type":"exact"}],"termid":"PR:O74786"}


id: GO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl sulfoxide, DMSO (C2H6OS), an alkyl sulfoxide that is practically odorless in its purified form. As a highly polar organic liquid, it is a powerful solvent. Its biological activities include the ability to penetrate plant and animal tissues and to preserve living cells during freezing.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dimethyl sulfoxide metabolic process","secondary_identifiers":["UM-BBD_pathwayID:sulf"],"synonyms":[{"name":"DMSO metabolic process","type":"exact"},{"name":"DMSO metabolism","type":"exact"},{"name":"dimethyl sulfoxide metabolism","type":"exact"},{"name":"dimethyl sulphoxide metabolic process","type":"exact"},{"name":"dimethyl sulphoxide metabolism","type":"exact"}],"termid":"GO:0018907"}


id: PBO:0091787
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Premature Initiation of Mitosis","termid":"PBO:0091787"}


id: GO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a nephron tubule over time, from its initial formation to the mature structure. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule development","termid":"GO:0061326"},{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule development","termid":"GO:0072080"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: PBO:0028301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity_during_mitosis","termid":"PBO:0028301"}


id: PBO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga8","termid":"PBO:0000466"}


id: PBO:0040563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 3","termid":"PBO:0040563"}


id: PBO:0080354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 9, pseudogene","termid":"PBO:0080354"}


id: GO:1990356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of a SUMO (small ubiquitin-related modifier) protein bound to a SUMO-conjugating E2 ligase. Sumoylation of the E2 ligase is an intermediate step required for the formation of covalent bonds between a SUMO protein and its ultimate protein target. SUMO is transferred to the E2 ligase by a SUMO-activating E1 enzyme. Sumoylation of the target protein is either facilitated directly by the sumoylated E2 ligase or aided by an optional E3 ligase.","definition_xrefs":["GOC:bhm","PMID:18691969"],"gene_count":0,"genotype_count":0,"name":"obsolete sumoylated E2 ligase complex (obsolete GO:1990356)","termid":"GO:1990356"}


id: GO:0018768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate + H2O = 2-aminobenzoate + cis-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoate hydrolase activity","secondary_identifiers":["EC:3.7.1.13"],"termid":"GO:0018768"}


id: GO:0042122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"alginic acid catabolic process","synonyms":[{"name":"alginate catabolic process","type":"exact"},{"name":"alginate catabolism","type":"exact"},{"name":"alginic acid breakdown","type":"exact"},{"name":"alginic acid catabolism","type":"exact"},{"name":"alginic acid degradation","type":"exact"}],"termid":"GO:0042122"}


id: GO:0072308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"},{"relation_name":"is_a","term_name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"},{"relation_name":"negatively_regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072308"}


id: GO:0072116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the pronephros. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"is_a","term_name":"kidney rudiment formation","termid":"GO:0072003"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros formation","synonyms":[{"name":"pronephric kidney formation","type":"exact"}],"termid":"GO:0072116"}


id: PBO:0052428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIT ligand","termid":"PBO:0052428"}


id: SO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one V-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_cluster","synonyms":[{"name":"V cluster","type":"exact"},{"name":"V-CLUSTER","type":"exact"}],"termid":"SO:0000526"}


id: PBO:0077809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 regulated apoptosis inducing protein 1","termid":"PBO:0077809"}


id: GO:0016584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GOC:bf","PMID:11447119","PMID:8676389"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome positioning (obsolete GO:0016584)","synonyms":[{"name":"nucleosome spacing","type":"exact"}],"termid":"GO:0016584"}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: GO:0170038
data:
  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id: GO:0031994
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id: PBO:0085968
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id: PBO:0050523
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id: PBO:0002477
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id: GO:0042744
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id: FYPO:0000062
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id: PBO:0034267
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id: PBO:0017841
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id: PBO:0073012
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id: GO:0014808
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id: GO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002300"}


id: PBO:0065948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component B","termid":"PBO:0065948"}


id: GO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of apical-to-basolateral delivery of soluble and particulate antigens to underlying mucosal-associated lymphoid tissue.","definition_xrefs":["PMID:15681746","PMID:11896763","GOC:jal","PMID:12843411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"mucosal immune response","termid":"GO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling in MALT","type":"exact"},{"name":"antigen transport in MALT","type":"related"},{"name":"antigen transport in mucosal-associated lymphoid tissue","type":"related"}],"termid":"GO:0002404"}


id: GO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the variable lymphocyte receptors (VLR) of jawless fish.","definition_xrefs":["GOC:add","PMID:16373579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of variable lymphocyte receptors of jawless fish","termid":"GO:0002202"}


id: PBO:0087245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-rich protein of unknown function; predicted to be palmitoylated; overproduction suppresses growth inhibition caused by exposure to immunosuppressant leflunomide; MLF3 has a paralog, VHS2, that arose from the whole genome duplication","termid":"PBO:0087245"}


id: GO:0010415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the mannan backbone, the unsubstituted polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"unsubstituted mannan metabolic process","synonyms":[{"name":"unsubstituted mannan metabolism","type":"exact"}],"termid":"GO:0010415"}


id: FYPO:0006742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PMID:30134042","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal transcription from MCB promoter","synonyms":[{"name":"normal expression of MBF target genes","type":"related"},{"name":"normal transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0006742"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: GO:1903665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual reproduction","synonyms":[{"name":"down regulation of asexual reproduction","type":"exact"},{"name":"down-regulation of asexual reproduction","type":"exact"},{"name":"downregulation of asexual reproduction","type":"exact"},{"name":"inhibition of asexual reproduction","type":"narrow"}],"termid":"GO:1903665"}


id: PBO:0089500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1764 family conserved eukaryotic protein, fungi, plants, apicomplexa","termid":"PBO:0089500"}


id: PBO:0068373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 166","termid":"PBO:0068373"}


id: GO:0160008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[protein] = (2E)-2-butenoate + L-lysyl-[protein].","definition_xrefs":["PMID:34608293","PMID:30279482","PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"protein decrotonylase activity","secondary_identifiers":["RHEA:69172"],"termid":"GO:0160008"}


id: PBO:0091971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17 (no initiator methionine)","termid":"PBO:0091971"}


id: PR:P87055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.07","synonyms":[{"name":"Spom972h-SPAC57A10.07","type":"exact"}],"termid":"PR:P87055"}


id: GO:0060161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the dopamine receptor protein signaling pathway. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"positively_regulates","term_name":"dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine receptor signaling pathway","synonyms":[{"name":"positive regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060161"}


id: PBO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEK kinase (MEKK) Mkh1","termid":"PBO:0000485"}


id: PBO:0082669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the DNA ligase IV complex; this complex mediates nonhomologous end joining in DNA double-strand break repair; sumoylated by Siz1p and Nfi1p SUMO ligases on Lys301; physically interacts with Dnl4p and Nej1p; homologous to mammalian XRCC4 protein","termid":"PBO:0082669"}


id: PBO:0071338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 2","termid":"PBO:0071338"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:0005262
data:
  {"annotated_genes":["SJAG_05229","SJAG_02019","SJAG_01090","SJAG_04668","SJAG_02532","SJAG_02877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88448,88506,91790,95712,110497],"is_not":false,"summary":null,"term":"GO:0005262"},{"annotations":[95713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[88507,109995,88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a calcium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transporter activity","termid":"GO:0015085"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01090":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8949178","Reactome:R-HSA-139854","Reactome:R-HSA-9663785","Reactome:R-HSA-8949145","Reactome:R-HSA-139855","Reactome:R-HSA-210420","Reactome:R-HSA-3295579"],"termid":"GO:0005262","terms_by_termid":{"GO:0005262":null,"GO:0008331":null,"GO:0015275":null}}


id: PBO:0062359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily S member 1","termid":"PBO:0062359"}


id: GO:0045945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase III.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase III","termid":"GO:0006359"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase III","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter","type":"narrow"},{"name":"positive regulation of transcription from Pol III promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0045945"}


id: PBO:0012301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRV2","termid":"PBO:0012301"}


id: PBO:0049320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GS homeobox 2","termid":"PBO:0049320"}


id: FYPO:0007028
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring at the medial cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to medial cortex septin ring during vegetative growth","synonyms":[{"name":"normal protein localisation to medial cortex septin ring during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortex septin ring during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007028"}


id: GO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2.","definition_xrefs":["GOC:krc","Wikipedia:Alkyne","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne biosynthetic process","synonyms":[{"name":"alkyne anabolism","type":"exact"},{"name":"alkyne biosynthesis","type":"exact"},{"name":"alkyne formation","type":"exact"},{"name":"alkyne synthesis","type":"exact"}],"termid":"GO:0043453"}


id: PBO:0005189
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'","termid":"PBO:0005189"}


id: GO:0019143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-phospho-3-deoxy-D-manno-oct-2-ulosonate + H2O = 3-deoxy-D-manno-octulosonate + phosphate.","definition_xrefs":["RHEA:11500","EC:3.1.3.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3-deoxy-manno-octulosonate-8-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R03350","MetaCyc:KDO-8PPHOSPHAT-RXN"],"synonyms":[{"name":"3-deoxy-D-manno-octulosonate-8-phosphate 8-phosphohydrolase activity","type":"related"}],"termid":"GO:0019143"}


id: GO:0019356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinate nucleotide from other compounds, including tryptophan.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"nicotinate nucleotide biosynthetic process","termid":"GO:0019357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate nucleotide biosynthetic process from tryptophan","synonyms":[{"name":"nicotinate nucleotide anabolism from tryptophan","type":"exact"},{"name":"nicotinate nucleotide formation from tryptophan","type":"exact"},{"name":"nicotinate nucleotide synthesis from tryptophan","type":"exact"}],"termid":"GO:0019356"}


id: PBO:0080246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 9 pseudogene","termid":"PBO:0080246"}


id: PBO:0091870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alditol NADP+ 1-oxidoreductase activity","termid":"PBO:0091870"}


id: PBO:0110232
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudo HisTone","termid":"PBO:0110232"}


id: SO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome that has been introduced by backcrossing with a separate species.","definition_xrefs":["PMID:11454782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introgressed_chromosome_region","synonyms":[{"name":"introgressed chromosome region","type":"exact"}],"termid":"SO:0000664"}


id: GO:0010487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methioninamine + spermidine = S-methyl-5'-thioadenosine + thermospermine + H+.","definition_xrefs":["EC:2.5.1.79","MetaCyc:RXN-11190","PMID:17560575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"thermospermine synthase activity","secondary_identifiers":["RHEA:30515"],"termid":"GO:0010487"}


id: GO:0051557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"leucoanthocyanidin metabolic process","termid":"GO:0051556"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin biosynthetic process","termid":"GO:0051557"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: FYPO:0000992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3-phosphate measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphoinositide level","termid":"FYPO:0001290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular phosphatidylinositol-3-phosphate level","synonyms":[{"name":"abnormal cellular phosphatidylinositol-3-phosphate level","type":"exact"},{"name":"altered PI-3-P accumulation","type":"related"},{"name":"altered cellular PI(3)P level","type":"exact"},{"name":"altered cellular PI-3-P level","type":"exact"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during mitotic cell cycle","type":"related"},{"name":"altered cellular phosphatidylinositol-3-phosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0000992"}


id: PBO:0043837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1B","termid":"PBO:0043837"}


id: PBO:0050936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 6","termid":"PBO:0050936"}


id: PBO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation","termid":"PBO:0031751"}


id: PR:000046670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe sre2 gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor sre2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"Spom-sre2","type":"exact"},{"name":"sterol regulatory element-binding protein 2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046670"}


id: SO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 5 carbon.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_methylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf","http://www.insdc.org/files/feature_table.html#7.4.2"],"synonyms":[{"name":"5 methylcytosine","type":"exact"},{"name":"5-mC","type":"exact"},{"name":"m-5C","type":"exact"},{"name":"m5c","type":"exact"}],"termid":"SO:0001918"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: GO:1990476
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool that remain unreleased even after prolonged stimulation causes a saturating degree of vesicular turnover. 50-80% of the total number of synaptic vesicles at a resting terminal bouton are in this pool.","definition_xrefs":["GOC:pad","PMID:22745285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle, resting pool","synonyms":[{"name":"reserve pool of synaptic vesicles","type":"exact"},{"name":"resting pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990476"}


id: GO:0052710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine, also known as histidine betaine or hercynine, a trimethylated derivative of histidine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine metabolic process","termid":"GO:0052708"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolic process","synonyms":[{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine breakdown","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine catabolism","type":"exact"},{"name":"N-alpha,N-alpha,N-alpha-trimethyl-L-histidine degradation","type":"exact"},{"name":"hercynine breakdown","type":"exact"},{"name":"hercynine catabolic process","type":"exact"},{"name":"hercynine catabolism","type":"exact"},{"name":"hercynine degradation","type":"exact"},{"name":"histidine betaine breakdown","type":"exact"},{"name":"histidine betaine catabolic process","type":"exact"},{"name":"histidine betaine catabolism","type":"exact"},{"name":"histidine betaine degradation","type":"exact"}],"termid":"GO:0052710"}


id: GO:0034115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion involved in gastrulation","termid":"GO:0070587"},{"relation_name":"negatively_regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"}


id: PBO:0070238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 176 pseudogene","termid":"PBO:0070238"}


id: PBO:0029770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_tapered_cells_(obsolete_FYPO:0002469)","termid":"PBO:0029770"}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["GOC:mengo_curators","PMID:19746965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: GO:0047903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose + NADP+ = 5-dehydro-D-fructose + NADPH.","definition_xrefs":["EC:1.1.1.124","MetaCyc:FRUCTOSE-5-DEHYDROGENASE-NADP+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fructose 5-dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:14069"],"synonyms":[{"name":"5-keto-D-fructose reductase (NADP+)","type":"related"},{"name":"5-ketofructose reductase (NADP(+)) activity","type":"related"},{"name":"5-ketofructose reductase (NADP)","type":"related"},{"name":"5-ketofructose reductase (NADP+) activity","type":"related"},{"name":"D-(-)fructose:(NADP+) 5-oxidoreductase activity","type":"related"},{"name":"D-fructose:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"fructose 5-(nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047903"}


id: GO:1904048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["GOC:pad","GOC:TermGenie","PMID:22314364","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of spontaneous synaptic transmission","termid":"GO:0150003"},{"relation_name":"regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"regulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904048"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["PMID:14690602","PMID:2397458","GOC:BHF_telomere","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200","GO:0006310"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: PR:Q10303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone cofactor E-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein alp21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.10","secondary_identifiers":["UniProtKB:Q10303"],"synonyms":[{"name":"Spom972h-TBCEL","type":"exact"},{"name":"altered polarity protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of tsm one protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10303"}


id: GO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The asymmetrical division of a neuroblast, the neural precursor in the central nervous system, giving rise to another neuroblast and a ganglion mother cell.","definition_xrefs":["PMID:11163136","PMID:11250167"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroblast division (obsolete GO:0045034)","synonyms":[{"name":"neuroblast cell division","type":"exact"},{"name":"neuroblast division","type":"exact"},{"name":"neuroblast division (sensu Nematoda and Protostomia)","type":"exact"},{"name":"neuroblast division (sensu Vertebrata)","type":"exact"}],"termid":"GO:0045034"}


id: PBO:0046457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 antisense RNA 1","termid":"PBO:0046457"}


id: GO:0097690
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an iron ion transmembrane transporter.","definition_xrefs":["GOC:BHF","GOC:kom","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter inhibitor activity","termid":"GO:0141110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"iron ion transmembrane transporter inhibitor activity","synonyms":[{"name":"iron channel inhibitor activity","type":"exact"}],"termid":"GO:0097690"}


id: GO:0007533
data:
  {"annotated_genes":["SJAG_02556","SJAG_02828","SJAG_03221","SJAG_02226","SJAG_02079","SJAG_02724","SJAG_01410","SJAG_03997","SJAG_02401","SJAG_01076","SJAG_01601","SJAG_01495","SJAG_01677","SJAG_02460","SJAG_00073","SJAG_01465","SJAG_01419","SJAG_00247","SJAG_03097","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92274,92751,95146,95210,106368,106889,114780],"is_not":false,"summary":null,"term":"GO:0007533"},{"annotations":[84084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[104579,92273,85299,85422,96655,102697,112854,95208,84085,114779,102127,106888,106367,111077,93525],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[104580,99309,90181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type determination","termid":"GO:0007531"},{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_01076":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type switching","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mating type switching and recombination","type":"related"}],"termid":"GO:0007533","terms_by_termid":{"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: PBO:0052983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte activating 3","termid":"PBO:0052983"}


id: GO:0009701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid biosynthetic process","termid":"GO:0009717"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid phytoalexin biosynthetic process","synonyms":[{"name":"isoflavonoid phytoalexin anabolism","type":"exact"},{"name":"isoflavonoid phytoalexin biosynthesis","type":"exact"},{"name":"isoflavonoid phytoalexin formation","type":"exact"},{"name":"isoflavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009701"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: GO:0140050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["GOC:BHF_miRNA","PMID:21778427","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"},{"relation_name":"negatively_regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140050"}


id: PBO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell_during_vegetative_growth","termid":"PBO:0030409"}


id: GO:1902375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any tRNA 3'-trailer cleavage, endonucleolytic that takes place in nucleus.","definition_xrefs":["GOC:TermGenie","PMID:23928301"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear tRNA 3'-trailer cleavage, endonucleolytic (obsolete GO:1902375)","synonyms":[{"name":"endonucleolytic tRNA 3'-end cleavage in cell nucleus","type":"exact"},{"name":"endonucleolytic tRNA 3'-end cleavage in nucleus","type":"exact"},{"name":"endonucleolytic tRNA 3'-trailer cleavage in cell nucleus","type":"related"},{"name":"endonucleolytic tRNA 3'-trailer cleavage in nucleus","type":"related"},{"name":"tRNA 3'-end cleavage, endonucleolytic in cell nucleus","type":"exact"},{"name":"tRNA 3'-end cleavage, endonucleolytic in nucleus","type":"exact"},{"name":"tRNA 3'-trailer cleavage, endonucleolytic in cell nucleus","type":"exact"}],"termid":"GO:1902375"}


id: FYPO:0005425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, is curved along the long axis, and contains cytoplasmic microtubules that are longer than normal and curved. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long curved microtubules","termid":"FYPO:0004863"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000005","FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"curved elongated vegetative cell with long curved interphase microtubules","synonyms":[{"name":"curved elongated cell with elongated curved interphase microtubules","type":"exact"},{"name":"curved elongated cell with long curved interphase microtubules during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell with long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"curved elongated vegetative cell with long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"curved elongated vegetative cell with long curved interphase microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005425"}


id: PATO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light purple","termid":"PATO:0001260"}


id: PBO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 37","termid":"PBO:0052797"}


id: PBO:0053280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin-like receptor pseudogene 1","termid":"PBO:0053280"}


id: PBO:0091459
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3197528_3197529insG","termid":"PBO:0091459"}


id: GO:0044806
data:
  {"annotated_genes":["SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108581],"is_not":false,"summary":null,"term":"GO:0044806"}]},"cv_name":"biological_process","definition":"The process by which G-quadruplex (also known as G4) DNA, which is a four-stranded DNA structure held together by guanine base pairing, is unwound or 'melted'.","definition_xrefs":["GOC:jl","GOC:se","PMID:23657261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA geometric change","termid":"GO:0032392"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G-quadruplex DNA unwinding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044806","terms_by_termid":{"GO:0044806":null}}


id: GO:0019132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of peptides after specific recognition of a C-terminal tripeptide, Xaa-Yaa-Zaa, in which Xaa is preferably Ala or Leu, Yaa is preferably Ala or Tyr, and Zaa is preferably Ala. Cleavage is at a variable distance from the C-terminus; a typical cleavage is -Ala-Ala-Arg-Ala-Ala-Lys-Glu-Asn-Tyr-Ala-Leu-Ala-Ala.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal processing peptidase activity (obsolete GO:0019132)","synonyms":[{"name":"C-terminal processing peptidase activity","type":"exact"},{"name":"CtpA gene product (Synechocystis sp.)","type":"related"},{"name":"Tsp protease","type":"narrow"},{"name":"photosystem II D1 protein processing peptidase","type":"narrow"},{"name":"protease Re","type":"related"},{"name":"tail-specific protease activity","type":"related"}],"termid":"GO:0019132"}


id: GO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"peribacteroid membrane","termid":"GO:0043661"}


id: PBO:0071194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 35","termid":"PBO:0071194"}


id: PR:P28829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- byr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P28829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase byr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.05","synonyms":[{"name":"MAPK kinase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAPKKK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-byr2","type":"exact"},{"name":"protein kinase ste8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P28829"}


id: PBO:0059502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 6","termid":"PBO:0059502"}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: GO:1901976
data:
  {"annotated_genes":["SJAG_01297","SJAG_02336","SJAG_01837","SJAG_02451","SJAG_03327","SJAG_03681","SJAG_00883","SJAG_03353","SJAG_02169","SJAG_01679","SJAG_03126","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104320,86843,110330,109851,108022,111957,95669,103298,99975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[109856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[97410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[90300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001047"],"synonyms":[{"name":"regulation of G1/S checkpoint","type":"related"},{"name":"regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901976","terms_by_termid":{"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0049506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 13","termid":"PBO:0049506"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: GO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monoferuloyl di-(hydroxyferuloyl) spermidine + NADPH + O2 = tri-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072552"}


id: PBO:0026882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II-regulated_genes_during_nitrogen_starvation","termid":"PBO:0026882"}


id: PR:Q92355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sen1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase sen1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.10c","synonyms":[{"name":"Spom972h-sen1","type":"exact"}],"termid":"PR:Q92355"}


id: GO:0045883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur utilization","termid":"GO:0006792"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur utilization","synonyms":[{"name":"activation of sulfur utilization","type":"narrow"},{"name":"positive regulation of sulphur utilization","type":"exact"},{"name":"stimulation of sulfur utilization","type":"narrow"},{"name":"up regulation of sulfur utilization","type":"exact"},{"name":"up-regulation of sulfur utilization","type":"exact"},{"name":"upregulation of sulfur utilization","type":"exact"}],"termid":"GO:0045883"}


id: PBO:0068504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 93, pseudogene","termid":"PBO:0068504"}


id: PBO:0067329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 420, pseudogene","termid":"PBO:0067329"}


id: PBO:0070402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP2 activator of ARL3 GTPase","termid":"PBO:0070402"}


id: GO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: peptidyl-L-amino acid + H2O = peptide + L-amino acid. Little or no action with -Asp, -Glu, -Arg, -Lys or -Pro.","definition_xrefs":["EC:3.4.17.1"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase A activity (obsolete GO:0004182)","synonyms":[{"name":"carboxypeptidase A activity","type":"exact"},{"name":"carboxypolypeptidase activity","type":"related"},{"name":"pancreatic carboxypeptidase A","type":"related"},{"name":"tissue carboxypeptidase A","type":"related"}],"termid":"GO:0004182"}


id: SO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U5_LTR_region","termid":"SO:0000422"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_five_prime_LTR_region","synonyms":[{"name":"U5 5' long terminal repeat region","type":"exact"},{"name":"U5 five prime LTR region","type":"exact"}],"termid":"SO:0000428"}


id: PBO:0028860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0028860"}


id: PBO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase Hat1","termid":"PBO:0000733"}


id: PBO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 3","termid":"PBO:0046685"}


id: PBO:0082428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame; may encode a non-functional member of the conserved, often subtelomerically-encoded Cos protein family","termid":"PBO:0082428"}


id: PBO:0033765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad51_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033765"}


id: GO:1904930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any membrane that is part of an amphisome.","definition_xrefs":["PMID:17984323","GO_REF:0000064","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome membrane","termid":"GO:0000421"},{"relation_name":"part_of","term_name":"amphisome","termid":"GO:0044753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"amphisome membrane","termid":"GO:1904930"}


id: GO:0021738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fastigial nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fastigial nucleus development","termid":"GO:0021738"}


id: SO:0001666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sub element of the DCE core promoter element with consensus sequence CTGT.","definition_xrefs":["PMID:16858867","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"DCE","termid":"SO:0001664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE_SII","synonyms":[{"name":"DCE SII","type":"exact"}],"termid":"SO:0001666"}


id: GO:0043541
data:
  {"annotated_genes":["SJAG_04821","SJAG_00924","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94437,94770,99653],"is_not":false,"summary":null,"term":"GO:0043541"}]},"cv_name":"cellular_component","definition":"A multienzyme, heterooligomeric complex involved in dolichyl-linked oligosaccharide synthesis. In yeast the complex is composed of Alg7p, which catalyzes the first step (GlcNAc1-PP-Dol from dolichol-phosphate and UDP-GlcNAc), and Alg13p plus Alg14p, the catalytic and anchoring subunits respectively, which together catalyze the second step (GlcNAc2-PP-dolichol from GlcNAc1-PP-Dol and UDP-GlcNAc) of dolichyl-linked oligosaccharide synthesis.","definition_xrefs":["PMID:19129246","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00924":null,"SJAG_03311":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043541","terms_by_termid":{"GO:0043541":null}}


id: PBO:0086647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0086647"}


id: FYPO:0002337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has one nucleus that is not in the normal location, is elongated, and is inviable.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","synonyms":[{"name":"elongated inviable vegetative cell, with mislocalized mononucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"inviable elongated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"inviable elongated mononucleate cell with displaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"inviable elongated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with asymmetrically localized nucleus","type":"exact"},{"name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"inviable long mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"inviable vegetative elongated mononucleate cell with mislocalized nucleus","type":"exact"},{"name":"lethal; elongated mononucleate vegetative cell with mislocalized nucleus","type":"exact"}],"termid":"FYPO:0002337"}


id: GO:1903601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thermospermine.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine metabolic process","synonyms":[{"name":"thermospermine metabolism","type":"exact"}],"termid":"GO:1903601"}


id: PR:O14367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transport inducer 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.01c","synonyms":[{"name":"Spom972h-gti1","type":"exact"}],"termid":"PR:O14367"}


id: PBO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_induce","termid":"PBO:0034177"}


id: SO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig of BAC reads.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"},{"relation_name":"part_of","term_name":"BAC","termid":"SO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_read_contig","synonyms":[{"name":"BAC read contig","type":"exact"}],"termid":"SO:0001866"}


id: PBO:0086371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; similar to Phanerochaete chrysosporium aryl alcohol dehydrogenase; ORFs AAD6/YFL056C and AAD16/YFL057C are displaced from one another by -1 frameshift; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086371"}


id: GO:1990129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication restart after a stalled replication fork has been repaired.","definition_xrefs":["PMID:17139333","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication restart (obsolete GO:1990129)","synonyms":[{"name":"pre-primosome complex involved in replication restart","type":"exact"}],"termid":"GO:1990129"}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: PBO:0091367
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant","termid":"PBO:0091367"}


id: GO:0018568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphenanthrene + O2 = H+ + 2-hydroxy-2 H-benzo[h]chromene-2-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3,4-dihydroxyphenanthrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0018568"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: PBO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu25","termid":"PBO:0017005"}


id: FYPO:0007058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to vacuole","synonyms":[{"name":"normal protein localisation to vacuole","type":"exact"},{"name":"normal protein localization in vacuole","type":"exact"},{"name":"normal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0007058"}


id: GO:0086091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cardiac conduction process that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate by cardiac conduction","termid":"GO:0086091"}


id: GO:0048021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that alters the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of melanin.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of melanin biosynthetic process","synonyms":[{"name":"regulation of melanin anabolism","type":"exact"},{"name":"regulation of melanin biosynthesis","type":"exact"},{"name":"regulation of melanin formation","type":"exact"},{"name":"regulation of melanin synthesis","type":"exact"}],"termid":"GO:0048021"}


id: PBO:0011140
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CAN1","termid":"PBO:0011140"}


id: SO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxywybutosine","secondary_identifiers":["RNAMOD:039"],"synonyms":[{"name":"OHyW","type":"exact"}],"termid":"SO:0001334"}


id: GO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H2O = a prenal + L-cysteine + H2O2.","definition_xrefs":["GOC:hjd","RHEA:53892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"prenylcysteine oxidase activity","secondary_identifiers":["EC:1.8.3.5","MetaCyc:RXN-18932"],"synonyms":[{"name":"S-prenyl-L-cysteine:oxygen oxidoreductase activity","type":"related"},{"name":"prenylcysteine lyase activity","type":"related"}],"termid":"GO:0001735"}


id: PATO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000837 auditory threshold value (obsolete PATO:0000837)","termid":"PATO:0000837"}


id: GO:0034917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylhex-2-enoyl-CoA + H2O = 3-hydroxy-2-methylhexanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-methylhex-2-enoyl-CoA hydratase activity","termid":"GO:0034917"}


id: GO:0006382
data:
  {"annotated_genes":["SJAG_04189","SJAG_00352","SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97190,100317,100030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"The conversion of an adenosine residue to inosine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenosine to inosine editing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006382","terms_by_termid":{"GO:0002100":null}}


id: PBO:0027187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_organization","termid":"PBO:0027187"}


id: GO:1904185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:15004232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"equatorial microtubule organizing center assembly","synonyms":[{"name":"EMTOC assembly","type":"exact"},{"name":"EMTOC formation","type":"exact"},{"name":"equatorial microtubule organising centre assembly","type":"exact"},{"name":"equatorial microtubule organising centre formation","type":"exact"},{"name":"equatorial microtubule organizing center formation","type":"exact"}],"termid":"GO:1904185"}


id: FYPO:0004436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis occurs to a greater extent than normal. Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["PMID:17515930","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased error-prone translesion synthesis","synonyms":[{"name":"increased DNA repair via error-prone translesion synthesis","type":"exact"},{"name":"increased error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"increased error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0004436"}


id: GO:1990513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex which interacts with E-box regulatory elements in target genes, including Period (Per1, Per2, Per3) and Cryptochrome (Cry1, Cry2), to activate their transcription during the daytime. The CRY-PER complexes inhibit CLOCK-BMAL1-driven transcription in a negative feedback loop to generate circadian rhythms.","definition_xrefs":["GOC:bhm","PMID:23229515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CLOCK-BMAL transcription complex","synonyms":[{"name":"CLOCK/BMAL complex","type":"exact"}],"termid":"GO:1990513"}


id: PBO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 7","termid":"PBO:0044141"}


id: PBO:0001334
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue","termid":"PBO:0001334"}


id: PBO:0083749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; with Tim23p, contributes to the architecture and function of the import channel; may link the import motor to the core Translocase of the Inner Mitochondrial membrane (TIM23 complex)","termid":"PBO:0083749"}


id: PBO:0058104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4319","termid":"PBO:0058104"}


id: GO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production","secondary_identifiers":["GO:0042107","GO:0050663","GO:0042089","GO:0042032"],"synonyms":[{"name":"cytokine biosynthetic process","type":"narrow"},{"name":"cytokine metabolic process","type":"narrow"},{"name":"cytokine secretion","type":"narrow"},{"name":"interferon production","type":"narrow"},{"name":"interferon secretion","type":"narrow"},{"name":"interleukin production","type":"narrow"},{"name":"interleukin secretion","type":"narrow"}],"termid":"GO:0001816"}


id: PBO:0042831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 4, pseudogene","termid":"PBO:0042831"}


id: PBO:0048424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-tRNA amidotransferase subunit C","termid":"PBO:0048424"}


id: FYPO:0000209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during the first meiotic nuclear division is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal attachment of spindle microtubules to kinetochore during meiosis I","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"abnormal attachment of spindle microtubules to meiosis I kinetochore","type":"exact"},{"name":"abnormal kinetochore mono-orientation at meiosis I","type":"exact"},{"name":"abnormal kinetochore orientation at meiosis I","type":"exact"},{"name":"abnormal sister kinetochore mono-orientation","type":"exact"}],"termid":"FYPO:0000209"}


id: GO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dADP catabolic process","synonyms":[{"name":"dADP breakdown","type":"exact"},{"name":"dADP catabolism","type":"exact"},{"name":"dADP degradation","type":"exact"}],"termid":"GO:0046057"}


id: PBO:0084451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family","termid":"PBO:0084451"}


id: PBO:0089235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial nuclease Lcl3, implicated in DNA repair","termid":"PBO:0089235"}


id: FYPO:0002870
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115319],"is_not":false,"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a non-growing cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to new cell tip","termid":"FYPO:0004977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to non-growing cell tip","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to non-growing cell tip","type":"exact"},{"name":"increased protein localization to new non-growing cell tip","type":"exact"},{"name":"increased protein localization to non-growing cell end","type":"exact"},{"name":"increased protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to non-growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0002870","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: PBO:0039615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 2","termid":"PBO:0039615"}


id: GO:1903407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:8160880","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"regulation of P-type sodium:potassium-exchanging transporter activity","termid":"GO:1903406"},{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transporter activity","termid":"GO:2000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"down regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"down regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"down regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"down regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"down regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down regulation of Na+,K+ pump","type":"related"},{"name":"down regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"down regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"down regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"down regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"down regulation of Na,K-pump","type":"related"},{"name":"down regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"down regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"down regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"down regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"down-regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"down-regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"down-regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"down-regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of Na+,K+ pump","type":"related"},{"name":"down-regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"down-regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"down-regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"down-regulation of Na,K-pump","type":"related"},{"name":"down-regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"down-regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"down-regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"down-regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"downregulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"downregulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"downregulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"downregulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"downregulation of Na+,K+ pump","type":"related"},{"name":"downregulation of Na+,K+-ATPase activity","type":"exact"},{"name":"downregulation of Na+/K+-ATPase activity","type":"exact"},{"name":"downregulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"downregulation of Na,K-activated ATPase activity","type":"exact"},{"name":"downregulation of Na,K-pump","type":"related"},{"name":"downregulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"downregulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"downregulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"downregulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"inhibition of (Na+ + K+)-ATPase activity","type":"narrow"},{"name":"inhibition of (Na+ + K+)-activated ATPase activity","type":"narrow"},{"name":"inhibition of ATP phosphohydrolase (Na+/K+-exchanging)","type":"narrow"},{"name":"inhibition of Na(+)/K(+)-ATPase activity","type":"narrow"},{"name":"inhibition of Na(+)/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of Na+,K+ pump","type":"related"},{"name":"inhibition of Na+,K+-ATPase activity","type":"narrow"},{"name":"inhibition of Na+/K+-ATPase activity","type":"narrow"},{"name":"inhibition of Na+/K+-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of Na,K-activated ATPase activity","type":"narrow"},{"name":"inhibition of Na,K-pump","type":"related"},{"name":"inhibition of sodium/potassium-exchanging ATPase activity","type":"narrow"},{"name":"inhibition of sodium/potassium-transporting ATPase activity","type":"narrow"},{"name":"inhibition of sodium:potassium exchanging ATPase activity","type":"narrow"},{"name":"inhibition of sodium:potassium-exchanging ATPase activity","type":"narrow"},{"name":"negative regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"negative regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"negative regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"negative regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"negative regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of Na+,K+ pump","type":"related"},{"name":"negative regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"negative regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"negative regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"negative regulation of Na,K-pump","type":"related"},{"name":"negative regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"negative regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"negative regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"negative regulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903407"}


id: GO:0008544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.","definition_xrefs":["GOC:go_curators","UBERON:0001003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis development","synonyms":[{"name":"hypodermis development","type":"related"}],"termid":"GO:0008544"}


id: GO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete specific RNA polymerase II transcription factor activity (obsolete GO:0003704)","synonyms":[{"name":"specific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0003704"}


id: PBO:0111438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger Vcx1","termid":"PBO:0111438"}


id: GO:0070284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminoimidazole ribonucleotide + S-adenosylmethionine = 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate + 5'deoxyadenosine.","definition_xrefs":["PMID:18953358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase activity","synonyms":[{"name":"HMP-P synthase activity","type":"exact"},{"name":"ThiC","type":"related"}],"termid":"GO:0070284"}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: PR:O13873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PCI domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02053","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein CSN12 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.08","secondary_identifiers":["UniProtKB:O13873"],"synonyms":[{"name":"Spom972h-PCID2","type":"exact"}],"termid":"PR:O13873"}


id: PBO:0075988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starch binding domain 1","termid":"PBO:0075988"}


id: PBO:0049893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 3","termid":"PBO:0049893"}


id: GO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type I secretion system (obsolete GO:0085021)","termid":"GO:0085021"}


id: GO:0003120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of epinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating epinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating adrenaline","type":"exact"}],"termid":"GO:0003120"}


id: PBO:0076056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 2","termid":"PBO:0076056"}


id: PR:O36025
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain-containing protein mpd2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.13c","synonyms":[{"name":"Spom972h-mpd2","type":"exact"}],"termid":"PR:O36025"}


id: PBO:0067107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 149, pseudogene","termid":"PBO:0067107"}


id: GO:0140442
data:
  {"annotated_genes":["SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91359],"is_not":false,"summary":null,"term":"GO:0140442"}]},"cv_name":"molecular_function","definition":"Binding to hydrogen peroxide (H2O2) and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:20919928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"peroxide sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140442","terms_by_termid":{"GO:0140442":null}}


id: PBO:0066965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 267","termid":"PBO:0066965"}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["UniProtKB:Q9P7H1","PR:000027624"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: PBO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger containing protein Phf2","termid":"PBO:0000774"}


id: PBO:0084697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial external NADH dehydrogenase; type II NAD(P)H:quinone oxidoreductase that catalyzes the oxidation of cytosolic NADH; Nde1p and Nde2p provide cytosolic NADH to the mitochondrial respiratory chain; NDE1 has a paralog, NDE2, that arose from the whole genome duplication","termid":"PBO:0084697"}


id: PBO:0061120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 9 pseudogene 1","termid":"PBO:0061120"}


id: _global:activated_by
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activated_by","secondary_identifiers":["GOREL:0000507"],"synonyms":[{"name":"activated by","type":"exact"},{"name":"activated_by_chemical","type":"exact"},{"name":"activated_by_substance","type":"exact"},{"name":"activity_increased_by","type":"exact"}],"termid":"_global:activated_by"}


id: PBO:0079493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNDC12 antisense RNA 1","termid":"PBO:0079493"}


id: PBO:0066307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 1","termid":"PBO:0066307"}


id: GO:0090497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell migration","termid":"GO:0090497"}


id: GO:1900579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid metabolic process","termid":"GO:0010685"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolism","type":"exact"}],"termid":"GO:1900579"}


id: PBO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D9","termid":"PBO:0050521"}


id: PBO:0087532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nucleotide Excision Repair Factor 1 (NEF1); recognizes and binds damaged DNA during nucleotide excision repair (NER); also involved in regulation of transcription; contains zinc finger motif; homolog of human XPA protein","termid":"PBO:0087532"}


id: PBO:0086079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to hexose transporters; expression is induced by low levels of glucose and repressed by high levels of glucose","termid":"PBO:0086079"}


id: GO:1902682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in the pericentric heterochromatin.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to pericentric heterochromatin","synonyms":[{"name":"protein localisation in centromeric heterochromatin","type":"exact"}],"termid":"GO:1902682"}


id: PATO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal orientation","synonyms":[{"name":"anterodorsally directed","type":"exact"}],"termid":"PATO:0002491"}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: GO:0035176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior directed towards society, or taking place between members of the same species. Occurs predominantly, or only, in individuals that are part of a group.","definition_xrefs":["PMID:12848939","GOC:jh2","Wikipedia:Social_behavior"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"social behavior","synonyms":[{"name":"cooperative behavior","type":"related"},{"name":"social behaviour","type":"exact"}],"termid":"GO:0035176"}


id: PBO:0072657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 9","termid":"PBO:0072657"}


id: PBO:0042516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--inositol 3-phosphatidyltransferase","termid":"PBO:0042516"}


id: PBO:0072812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 8","termid":"PBO:0072812"}


id: GO:1905455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["PMID:27010503","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"},{"relation_name":"positively_regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid progenitor cell differentiation","synonyms":[{"name":"activation of myeloid progenitor cell differentiation","type":"narrow"},{"name":"up regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"up-regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"upregulation of myeloid progenitor cell differentiation","type":"exact"}],"termid":"GO:1905455"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["ISBN:0879695897","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: GO:0006881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining iron ions in an extracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of iron ion","termid":"GO:0097577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0098771","GO:0008150"],"is_obsolete":false,"name":"extracellular sequestering of iron ion","synonyms":[{"name":"extracellular iron ion retention","type":"exact"},{"name":"extracellular iron ion sequestering","type":"exact"},{"name":"extracellular iron ion sequestration","type":"exact"},{"name":"extracellular iron ion storage","type":"exact"},{"name":"extracellular retention of iron ion","type":"exact"},{"name":"extracellular sequestration of iron ion","type":"exact"},{"name":"extracellular storage of iron ion","type":"exact"}],"termid":"GO:0006881"}


id: PBO:0066553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 17","termid":"PBO:0066553"}


id: PBO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 15","termid":"PBO:0071292"}


id: GO:0004379
data:
  {"annotated_genes":["SJAG_00102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104432],"is_not":false,"summary":null,"term":"GO:0004379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide.","definition_xrefs":["EC:2.3.1.97"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-184392","Reactome:R-HSA-2534087","RHEA:15521","MetaCyc:2.3.1.97-RXN","GO:0019106"],"synonyms":[{"name":"N-myristoyltransferase activity","type":"exact"},{"name":"myristoyl-CoA-protein N-myristoyltransferase activity","type":"related"},{"name":"myristoyl-coenzyme A:protein N-myristoyl transferase activity","type":"related"},{"name":"myristoylating enzymes","type":"related"},{"name":"peptide N-myristoyltransferase activity","type":"related"},{"name":"peptide N-tetradecanoyltransferase activity","type":"related"},{"name":"protein N-myristoyltransferase activity","type":"related"},{"name":"tetradecanoyl-CoA:glycylpeptide N-tetradecanoyltransferase activity","type":"related"}],"termid":"GO:0004379","terms_by_termid":{"GO:0004379":null}}


id: GO:0065009
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101209,91390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of a molecular function","type":"exact"}],"termid":"GO:0065009","terms_by_termid":{"GO:1904530":null}}


id: PATO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000465 marked (obsolete PATO:0000465)","termid":"PATO:0000465"}


id: SO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the genome of known length that is composed by ordering and aligning two or more different regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome_assembly#Genome_assembly"],"termid":"SO:0001248"}


id: PATO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Violet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"violet","termid":"PATO:0001424"}


id: PR:Q10491
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec74 gene.","definition_xrefs":["UniProtKB:Q10491","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf guanine nucleotide exchange factor sec74 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.01","synonyms":[{"name":"Spom972h-sec74","type":"exact"}],"termid":"PR:Q10491"}


id: GO:0033183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone ubiquitination (obsolete GO:0033183)","termid":"GO:0033183"}


id: GO:0004930
data:
  {"annotated_genes":["SJAG_01699","SJAG_01345","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[93147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["Wikipedia:GPCR","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-114558","GO:0016526","Reactome:R-HSA-167408","GO:0001624","GO:0001623","Reactome:R-HSA-114552","GO:0001625","GO:0001622"],"synonyms":[{"name":"EBV-induced receptor","type":"narrow"},{"name":"Epstein-Barr Virus-induced receptor activity","type":"narrow"},{"name":"G protein coupled receptor activity","type":"exact"},{"name":"G protein linked receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity","type":"exact"},{"name":"G-protein coupled receptor activity, unknown ligand","type":"narrow"},{"name":"G-protein linked receptor activity","type":"exact"},{"name":"GPCR activity","type":"exact"},{"name":"Mas proto-oncogene receptor activity","type":"narrow"},{"name":"RDC1 receptor activity","type":"narrow"},{"name":"SREB receptor","type":"narrow"},{"name":"ligand-dependent GPCR activity","type":"exact"},{"name":"orphan G protein coupled receptor activity","type":"narrow"},{"name":"orphan G-protein coupled receptor activity","type":"narrow"},{"name":"orphan GPCR activity","type":"narrow"},{"name":"receptor activity, G-protein coupled","type":"exact"},{"name":"super conserved receptor expressed in brain receptor activity","type":"narrow"}],"termid":"GO:0004930","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:1990576":null}}


id: GO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a virion.","definition_xrefs":["GOC:jid","GOC:rph","PMID:213106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion membrane","termid":"GO:0055036"}


id: GO:0017044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanocyte-stimulating hormone, any of three peptide hormones that are produced by the intermediate lobe of the pituitary gland and, upon receptor binding, cause dispersal of melanosomes in melanophores of poikilothermic vertebrates.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0140677","GO:0005515","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"melanocyte-stimulating hormone activity","synonyms":[{"name":"alpha-melanocyte stimulating hormone activity","type":"narrow"},{"name":"alpha-melanophore stimulating hormone activity","type":"narrow"},{"name":"melanocyte stimulating hormone activity","type":"exact"}],"termid":"GO:0017044"}


id: GO:0030837
data:
  {"annotated_genes":["SJAG_01943","SJAG_01993","SJAG_04703","SJAG_04982","SJAG_00279","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94983,84410,88608,88424,110381,114660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[93822,110384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin polymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actin filament polymerization","type":"exact"},{"name":"down-regulation of actin filament polymerization","type":"exact"},{"name":"downregulation of actin filament polymerization","type":"exact"},{"name":"inhibition of actin filament polymerization","type":"narrow"},{"name":"negative regulation of actin polymerization","type":"exact"},{"name":"negative regulation of actin polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030837","terms_by_termid":{"GO:0042989":null,"GO:0051016":null}}


id: PBO:0081079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 11","termid":"PBO:0081079"}


id: PBO:0060719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8","termid":"PBO:0060719"}


id: PBO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 28","termid":"PBO:0070493"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_00284","SJAG_03938","SJAG_02320","SJAG_02166","SJAG_03357","SJAG_04044","SJAG_04391","SJAG_03005","SJAG_03864","SJAG_01925","SJAG_03268","SJAG_03011","SJAG_00938","SJAG_04960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89316,113771],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[113756,109937,110219,114855,95631,84774,86869,98000],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[112246,104207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: MOD:00087
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-myristoyl-L-lysine.","definition_xrefs":["Unimod:45#K","OMSSA:81","PubMed:8346241","PubMed:1402651","RESID:AA0078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-myristoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(tetradecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(tetradecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-myristoyl lysine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N(zeta)-myristoyllysine","type":"exact"},{"name":"N6-(1-oxotetradecyl)-L-lysine","type":"exact"},{"name":"N6-(C14:0 aliphatic acyl)lysine","type":"exact"},{"name":"N6-myristoyl-L-lysine","type":"exact"},{"name":"N6-myristoylated L-lysine","type":"exact"},{"name":"N6MyrLys","type":"exact"},{"name":"epsilon-myristoyllysine","type":"exact"},{"name":"myristoylationk","type":"exact"}],"termid":"MOD:00087"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: GO:0140824
data:
  {"annotated_genes":["SJAG_00141","SJAG_03166","SJAG_01199","SJAG_01216","SJAG_02515"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104901,113415],"is_not":false,"summary":null,"term":"GO:0140824"},{"annotations":[101102,104900,91298,113414,69273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-dithiol + a hydroperoxide = [thioredoxin]-disulfide + an alcohol + H2O.","definition_xrefs":["RHEA:62620","PMID:12707274","PMID:19820102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin activity","termid":"GO:0051920"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0051920","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thioredoxin-dependent peroxiredoxin activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.11.1.24"],"termid":"GO:0140824","terms_by_termid":{"GO:0008379":null,"GO:0140824":null}}


id: GO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["PMID:20974832","ISBN:0198506732","PMID:22216004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid A metabolic process","synonyms":[{"name":"lipid A metabolism","type":"exact"}],"termid":"GO:0046493"}


id: GO:0070929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.","definition_xrefs":["GOC:mah","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"trans-translation","termid":"GO:0070929"}


id: GO:0097069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"},{"relation_name":"is_a","term_name":"response to thyroxine","termid":"GO:0097068"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroxine stimulus","synonyms":[{"name":"cellular response to T4 stimulus","type":"exact"}],"termid":"GO:0097069"}


id: FYPO:0001735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal iron-sulfur cluster transfer","synonyms":[{"name":"abnormal iron-sulfur cluster transfer during mitotic cell cycle","type":"related"},{"name":"abnormal iron-sulfur cluster transfer during vegetative growth","type":"exact"},{"name":"abnormal iron-sulphur cluster transfer","type":"exact"}],"termid":"FYPO:0001735"}


id: PBO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0000416"}


id: GO:0007601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of light stimulus","termid":"GO:0050953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual perception","secondary_identifiers":["Wikipedia:Visual_perception"],"synonyms":[{"name":"sense of sight","type":"exact"},{"name":"sensory visual perception","type":"exact"},{"name":"vision","type":"exact"}],"termid":"GO:0007601"}


id: PBO:0059482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage scavenger receptor 1","termid":"PBO:0059482"}


id: GO:1904440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:18353247","GOC:kom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of iron ion transmembrane transport","termid":"GO:0034761"},{"relation_name":"is_a","term_name":"regulation of iron ion import across plasma membrane","termid":"GO:1904438"},{"relation_name":"positively_regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"positively_regulates","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0098771","GO:0055085"],"is_obsolete":false,"name":"positive regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903991"],"synonyms":[{"name":"activation of ferrous ion import into cell","type":"narrow"},{"name":"activation of ferrous iron import across plasma membrane","type":"narrow"},{"name":"positive regulation of ferrous ion import into cell","type":"related"},{"name":"positive regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"positive regulation of ferrous iron import into cell","type":"related"},{"name":"up regulation of ferrous ion import into cell","type":"related"},{"name":"up regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"up-regulation of ferrous ion import into cell","type":"related"},{"name":"up-regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"upregulation of ferrous ion import into cell","type":"related"},{"name":"upregulation of ferrous iron import across plasma membrane","type":"related"}],"termid":"GO:1904440"}


id: GO:1904014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["PMID:1505525","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to serotonin","termid":"GO:1904014"}


id: PBO:0112791
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphate Quality Regulator","termid":"PBO:0112791"}


id: PBO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein inhibiting regulator of actin dynamics","termid":"PBO:0043854"}


id: PBO:0081907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 865","termid":"PBO:0081907"}


id: GO:1902181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verruculogen.","definition_xrefs":["PMID:23649274","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"verruculogen metabolic process","termid":"GO:1902179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"verruculogen biosynthetic process","synonyms":[{"name":"verruculogen anabolism","type":"exact"},{"name":"verruculogen biosynthesis","type":"exact"},{"name":"verruculogen formation","type":"exact"},{"name":"verruculogen synthesis","type":"exact"}],"termid":"GO:1902181"}


id: GO:1990721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is capable of dephosphorylation of alky, aryl and acyl orthophosphate monoesters and phosphorylated proteins. Optimal activity in acidic environment (pH 4-6). In mammals it consists of a homodimer of ACPP.","definition_xrefs":["GOC:bhm","PMID:12525165"],"gene_count":0,"genotype_count":0,"name":"obsolete prostatic acid phosphatase complex (obsolete GO:1990721)","synonyms":[{"name":"ACPP homodimer complex","type":"narrow"},{"name":"PAP complex","type":"exact"},{"name":"prostatic acid phosphatase complex","type":"exact"}],"termid":"GO:1990721"}


id: PBO:0076543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taspase 1","termid":"PBO:0076543"}


id: PBO:0065499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis susceptibility 1 candidate 1","termid":"PBO:0065499"}


id: PBO:0036442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative stress transcription corepressor Oxs1","termid":"PBO:0036442"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["GOC:cjm","MP:0009834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: PBO:0110388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPE1 pseudogene 2","termid":"PBO:0110388"}


id: PBO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetate transmembrane transporter (predicted)","termid":"PBO:0001009"}


id: GO:0071444
data:
  {"annotated_genes":["SJAG_01978","SJAG_01718","SJAG_03209","SJAG_01345","SJAG_00990","SJAG_02233","SJAG_03340","SJAG_00993","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85365,102335,88285,92475,93145,89415],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84295,103202],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"},{"annotations":[101586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pheromone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular pheromone response","type":"exact"}],"termid":"GO:0071444","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: FYECO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerophosphocholine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerophosphocholine","secondary_identifiers":["PMID:38133430"],"termid":"FYECO:0000439"}


id: GO:1903282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutathione peroxidase activity","synonyms":[{"name":"regulation of GSH peroxidase activity","type":"exact"},{"name":"regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"regulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903282"}


id: PBO:0081767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 699","termid":"PBO:0081767"}


id: PATO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having two horns or horn-shaped branches.","definition_xrefs":["mondofacto:mondofacto"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bicornuate","termid":"PATO:0002161"}


id: PBO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear distribution C pseudogene 2","termid":"PBO:0061614"}


id: GO:1990858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.","definition_xrefs":["PMID:26306444","PMID:25996210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lectin","termid":"GO:1990840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lectin","termid":"GO:1990858"}


id: MOD:01074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a napthylacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napthylacetyl modified residue","termid":"MOD:01074"}


id: PBO:0039409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 13","termid":"PBO:0039409"}


id: PBO:0028611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylate_kinase_activity","termid":"PBO:0028611"}


id: PBO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 2","termid":"PBO:0070467"}


id: PBO:0083104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p","termid":"PBO:0083104"}


id: FYPO:0000710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to nitrogen starvation, which normally occurs in G1 phase, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"abnormal mitotic cell cycle arrest in response to nitrogen depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000710"}


id: GO:1903575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cornified envelope.","definition_xrefs":["GOC:pm","GOC:TermGenie","PMID:22226963","PMID:24794495","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"cornified envelope assembly","synonyms":[{"name":"cornified envelope formation","type":"exact"}],"termid":"GO:1903575"}


id: GO:0004563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides.","definition_xrefs":["EC:3.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"beta-N-acetylhexosaminidase activity","secondary_identifiers":["Reactome:R-HSA-9035982","Reactome:R-HSA-9840884","Reactome:R-HSA-9638076","Reactome:R-HSA-9035983","Reactome:R-HSA-9035978","Reactome:R-HSA-1605632","Reactome:R-HSA-2105001","Reactome:R-HSA-1638053","Reactome:R-HSA-3656259","Reactome:R-HSA-3662344","Reactome:R-HSA-1605595","Reactome:R-HSA-2162225","Reactome:R-HSA-9638078","Reactome:R-HSA-9840833","MetaCyc:3.2.1.52-RXN","Reactome:R-HSA-9638075","Reactome:R-HSA-9035976"],"synonyms":[{"name":"N-acetyl-beta-D-hexosaminidase activity","type":"related"},{"name":"N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"N-acetyl-beta-hexosaminidase activity","type":"related"},{"name":"N-acetylhexosaminidase activity","type":"related"},{"name":"beta-D-N-acetylhexosaminidase activity","type":"related"},{"name":"beta-D-hexosaminidase activity","type":"related"},{"name":"beta-N-acetyl-D-hexosaminidase activity","type":"related"},{"name":"beta-N-acetyl-D-hexosaminide N-acetylhexosaminohydrolase activity","type":"related"},{"name":"beta-acetylaminodeoxyhexosidase activity","type":"related"},{"name":"beta-acetylhexosaminidinase activity","type":"related"},{"name":"beta-hexosaminidase activity","type":"related"},{"name":"hexosaminidase A","type":"related"}],"termid":"GO:0004563"}


id: PBO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030633"}


id: GO:0140274
data:
  {"annotated_genes":["SJAG_04140","SJAG_01837","SJAG_03048","SJAG_01224","SJAG_00082","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94720],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[86127,89907,98464,107265,112736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[112739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"},{"annotations":[112740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"The cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01224":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"repair of kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140274","terms_by_termid":{"GO:0140273":null,"GO:0140274":null,"GO:0140429":null,"GO:1904967":null}}


id: PBO:0047148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM181A antisense RNA 1","termid":"PBO:0047148"}


id: PBO:0043914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase 1","termid":"PBO:0043914"}


id: SO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase III type 1.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000845 RNApol_III_promoter_type_1_region (obsolete SO:0000845)","termid":"SO:0000845"}


id: SO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as selenocysteine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_selenocysteine","termid":"SO:0000885"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_selenocysteine","synonyms":[{"name":"gene with stop codon redefined as selenocysteine","type":"exact"}],"termid":"SO:0000710"}


id: PBO:0085216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase for Vac8p; required for vacuolar membrane fusion; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; autoacylates; required for vacuolar integrity under stress conditions","termid":"PBO:0085216"}


id: PBO:0030512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_reversine","termid":"PBO:0030512"}


id: GO:0044521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant muscle damage in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21150580","PMID:10620318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in muscle damage in another organism","synonyms":[{"name":"envenomation resulting in muscle damage in other organism","type":"exact"}],"termid":"GO:0044521"}


id: PBO:0057641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1233-1","termid":"PBO:0057641"}


id: GO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a female.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"female meiosis chromosome segregation","termid":"GO:0016321"}


id: FYPO:0006607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex shows an abnormal pattern of localization to the complex over time.","definition_xrefs":["PomBase:mah","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"abnormal bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"abnormal pattern of intermittent protein localization to Cdr2 medial cortical node complex","type":"exact"},{"name":"abnormal pattern of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"abnormal transient protein localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006607"}


id: GO:0047977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,9E,14Z)-(8x,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate + H2O = (5Z,9E,14Z)-(8x,11x,12S)-8,11,12-trihydroxyicosa-5,9,14-trienoate.","definition_xrefs":["EC:3.3.2.7","MetaCyc:HEPOXILIN-EPOXIDE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"hepoxilin-epoxide hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2161949","RHEA:16665"],"synonyms":[{"name":"(5Z,9E,14Z)-(8xi,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate hydrolase activity","type":"related"},{"name":"hepoxilin A(3) hydrolase activity","type":"related"},{"name":"hepoxilin A3 hydrolase activity","type":"related"},{"name":"hepoxilin epoxide hydrolase activity","type":"related"},{"name":"hepoxylin hydrolase activity","type":"related"}],"termid":"GO:0047977"}


id: PBO:0068387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 187","termid":"PBO:0068387"}


id: FYPO:0000748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercury ions. Cells stop growing (and may die) at a concentration of mercury ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to mercury","synonyms":[{"name":"hypersensitive to mercury","type":"exact"},{"name":"sensitive to mercury during mitotic cell cycle","type":"related"},{"name":"sensitive to mercury during vegetative growth","type":"exact"},{"name":"sensitive to mercury ions","type":"exact"}],"termid":"FYPO:0000748"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:25046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r1622","EC:3.7.1.14","MetaCyc:RXN-12070"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: PR:O13726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium/hydrogen exchanger 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Na(+)/H(+) antiporter C15A10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.06","secondary_identifiers":["UniProtKB:O13726"],"synonyms":[{"name":"Spom972h-SLC9A9","type":"exact"}],"termid":"PR:O13726"}


id: GO:0035493
data:
  {"annotated_genes":["SJAG_03403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101771],"is_not":false,"summary":null,"term":"GO:0035493"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a SNARE complex, a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["PMID:10872468","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0044085","GO:0016192","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"SNARE complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035493","terms_by_termid":{"GO:0035493":null}}


id: GO:0044850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle","secondary_identifiers":["Wikipedia:Menstrual_cycle"],"termid":"GO:0044850"}


id: PATO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality of being covered with short hairs or soft down.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent hair","termid":"PATO:0001320"}


id: PBO:0084227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF","termid":"PBO:0084227"}


id: FYPO:0004680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyadenylated 5.8S rRNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal polyadenylated 5.8S rRNA level","synonyms":[{"name":"normal polyadenylated 5.8S rRNA accumulation","type":"related"},{"name":"normal polyadenylated 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal polyadenylated 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"normal polyadenylated 5.8S rRNA transcript level","type":"exact"}],"termid":"FYPO:0004680"}


id: PBO:0062841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 7","termid":"PBO:0062841"}


id: PBO:0084713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane insertase; mediates the insertion of both mitochondrial- and nuclear-encoded proteins from the matrix into the inner membrane; also has a role in insertion of carrier proteins into the inner membrane; acts as a voltage-gated ion channel, activated by substrate peptides; interacts with mitochondrial ribosomes; conserved from bacteria to animals","termid":"PBO:0084713"}


id: PBO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 2 Y-linked","termid":"PBO:0061812"}


id: PBO:0076112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18","termid":"PBO:0076112"}


id: PBO:0059128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 6","termid":"PBO:0059128"}


id: PBO:0040893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A pseudogene 2","termid":"PBO:0040893"}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: PBO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_vegetative_growth","termid":"PBO:0036011"}


id: GO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication by electrical coupling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication by electrical coupling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086044"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: PBO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Sqt1 (predicted)","termid":"PBO:0001599"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: PBO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 3","termid":"PBO:0046455"}


id: GO:1904427
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22910094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion membrane transport","type":"narrow"},{"name":"activation of calcium ion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane calcium transport","type":"narrow"},{"name":"positive regulation of calcium ion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane calcium transport","type":"exact"},{"name":"up regulation of calcium ion membrane transport","type":"exact"},{"name":"up regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane calcium transport","type":"exact"},{"name":"up-regulation of calcium ion membrane transport","type":"exact"},{"name":"up-regulation of calcium ion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane calcium transport","type":"exact"},{"name":"upregulation of calcium ion membrane transport","type":"exact"},{"name":"upregulation of calcium ion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane calcium transport","type":"exact"}],"termid":"GO:1904427","terms_by_termid":{"GO:1905665":null}}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:9321918","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: PBO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 111 pseudogene","termid":"PBO:0070191"}


id: PBO:0040389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit C1","termid":"PBO:0040389"}


id: PBO:0075716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin","termid":"PBO:0075716"}


id: GO:0035310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum cell fate specification","termid":"GO:0035310"}


id: PBO:0005429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Snd1","termid":"PBO:0005429"}


id: GO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of non-rapid eye movement (NREM) sleep.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, non-REM sleep","termid":"GO:0045188"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, non-REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, non-REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, non-REM sleep","type":"narrow"},{"name":"negative regulation of non-REM sleep","type":"exact"}],"termid":"GO:0042323"}


id: PBO:0027796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_oxaliplatin","termid":"PBO:0027796"}


id: GO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one relatively unspecialized immature cystocyte of the germ-line cyst in the germarium acquires the specialized features of an oocyte. An example of this process can be found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte differentiation","termid":"GO:0009994"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"related"}],"termid":"GO:0030706"}


id: GO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"positively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode male tail tip morphogenesis","termid":"GO:0110039"}


id: PBO:0075863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 3","termid":"PBO:0075863"}


id: PBO:0073459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A2","termid":"PBO:0073459"}


id: PBO:0085500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein arginine N-methyltransferase; exhibits septin and Hsl1p-dependent localization to the bud neck in budded cells and periodic Hsl1p-dependent phosphorylation; required with Hsl1p, and Elm1p for the mother-bud neck recruitment, phosphorylation, and degradation of Swe1p; responsible for symmetric dimethylation of histone H4 on Arg3; relocalizes away from bud neck upon DNA replication stress; human homolog PRMT5 can complement yeast hsl7 mutant","termid":"PBO:0085500"}


id: SO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a coding genomic variant.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_variant_quality","synonyms":[{"name":"coding variant quality","type":"exact"}],"termid":"SO:0001814"}


id: PBO:0028821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_fewer_than_four_spores","termid":"PBO:0028821"}


id: GO:0048015
data:
  {"annotated_genes":["SJAG_05330","SJAG_00114","SJAG_04537","SJAG_01519","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89311,89478,92033,93690,107194],"is_not":false,"summary":null,"term":"GO:0048015"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.","definition_xrefs":["GOC:ceb","GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00321":null,"SJAG_01519":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phosphatidylinositol-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phospholipid-mediated signaling","type":"broad"},{"name":"phosphatidylinositol-mediated signal transduction","type":"exact"},{"name":"phosphatidylinositol-mediated signalling","type":"exact"},{"name":"phosphoinositide-mediated signaling","type":"exact"},{"name":"phosphoinositide-mediated signalling","type":"exact"}],"termid":"GO:0048015","terms_by_termid":{"GO:0048015":null}}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: SO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the deletion, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_ablation","synonyms":[{"name":"feature ablation","type":"exact"}],"termid":"SO:0001879"}


id: GO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either active or passive, by which an organism avoids the effects of the symbiont organism's immune response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont immune response (obsolete GO:0051842)","synonyms":[{"name":"evasion or tolerance of symbiont immune response","type":"exact"},{"name":"immune evasion","type":"broad"}],"termid":"GO:0051842"}


id: GO:0004263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr-Xaa > Trp-Xaa > Phe-Xaa > Leu-Xaa.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin activity (obsolete GO:0004263)","synonyms":[{"name":"alpha-chymar","type":"related"},{"name":"alpha-chymar ophth","type":"related"},{"name":"alpha-chymotrypsin A","type":"related"},{"name":"alpha-chymotrypsin activity","type":"narrow"},{"name":"avazyme","type":"related"},{"name":"chymar","type":"related"},{"name":"chymotest","type":"related"},{"name":"chymotrypsin A activity","type":"narrow"},{"name":"chymotrypsin B activity","type":"narrow"},{"name":"chymotrypsin activity","type":"exact"},{"name":"chymotrypsins A and B","type":"related"},{"name":"enzeon","type":"related"},{"name":"quimar","type":"related"},{"name":"quimotrase activity","type":"related"}],"termid":"GO:0004263"}


id: GO:0060490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of the lung epithelial tube.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in lung morphogenesis","termid":"GO:0060490"}


id: GO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenine + H2O = hypoxanthine + NH3.","definition_xrefs":["EC:3.5.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"adenine deaminase activity","secondary_identifiers":["MetaCyc:ADENINE-DEAMINASE-RXN","RHEA:23688"],"synonyms":[{"name":"ADase activity","type":"related"},{"name":"adenase activity","type":"related"},{"name":"adenine aminase activity","type":"related"},{"name":"adenine aminohydrolase activity","type":"related"}],"termid":"GO:0000034"}


id: PBO:0054517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1917","termid":"PBO:0054517"}


id: GO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + O2 = L-xylo-hex-3-ulonolactone + H2O2.","definition_xrefs":["EC:1.1.3.8","MetaCyc:L-GULONOLACTONE-OXIDASE-RXN","RHEA:32363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-gulonolactone oxidase activity","synonyms":[{"name":"GLO activity","type":"related"},{"name":"L-gulono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone oxidase activity","type":"related"},{"name":"L-gulono-gamma-lactone:O2 oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone:oxidoreductase activity","type":"related"}],"termid":"GO:0050105"}


id: GO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075151)","synonyms":[{"name":"positive regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075151"}


id: GO:0140977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of acetone. These may include chemical modification, for example to methylglyoxal.","definition_xrefs":["PMID:22314896","PMID:26958851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of acetone","termid":"GO:0140977"}


id: FYPO:0000471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mating type switching is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating type switching","termid":"FYPO:0000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mating type switching","synonyms":[{"name":"increased mating type switching during mitotic cell cycle","type":"related"},{"name":"increased mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: increased","type":"related"}],"termid":"FYPO:0000471"}


id: PR:P0CT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-2 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.08","synonyms":[{"name":"Spom972h-Tf2-2","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT35"}


id: PBO:0004582
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.57","termid":"PBO:0004582"}


id: PBO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 2","termid":"PBO:0060423"}


id: GO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-lysophosphatidylserine + H2O = sn-glycerol-phosphoserine + a carboxylate.","definition_xrefs":["EC:3.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-acyl-2-lysophosphatidylserine acylhydrolase activity","synonyms":[{"name":"phosphatidylserine-specific phospholipase A1 activity","type":"broad"}],"termid":"GO:0052740"}


id: FYPO:0001833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased phosphoglycerate mutase activity","termid":"FYPO:0001833"}


id: FYPO:0009051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing ammonium as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on ammonium nitrogen source","synonyms":[{"name":"increased growth on ammonium nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on ammonium nitrogen source","type":"exact"}],"termid":"FYPO:0009051"}


id: SO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons ATH (ATT, ATC and ATA).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine","synonyms":[{"name":"I","type":"exact"},{"name":"Ile","type":"exact"}],"termid":"SO:0001438"}


id: PBO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak1","termid":"PBO:0002650"}


id: GO:0045733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"acetate catabolic process","secondary_identifiers":["GO:0019663"],"synonyms":[{"name":"acetate breakdown","type":"exact"},{"name":"acetate catabolism","type":"exact"},{"name":"acetate degradation","type":"exact"},{"name":"homoacetate catabolic process","type":"related"}],"termid":"GO:0045733"}


id: GO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0000117)","synonyms":[{"name":"G2/M-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G2/M transition of mitotic cell cycle","type":"related"}],"termid":"GO:0000117"}


id: GO:0052175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host carbohydrate (obsolete GO:0052175)","termid":"GO:0052175"}


id: PBO:0068097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 404","termid":"PBO:0068097"}


id: FYPO:0004233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased and begins later than normal.","definition_xrefs":["PMID:21118960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased and delayed mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004233"}


id: MOD:00601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively produces an heterocyclic amino acid with a covalent bond between the side chain and either its alpha amino or 1-carboxyl group, possibly breaking the peptide chain.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclized residue","synonyms":[{"name":"CycRes","type":"exact"}],"termid":"MOD:00601"}


id: PBO:0030064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphoglycerate_mutase_activity","termid":"PBO:0030064"}


id: PR:O74498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FAS-associated factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04839","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.11","secondary_identifiers":["UniProtKB:O74498"],"synonyms":[{"name":"Spom972h-FAF2","type":"exact"}],"termid":"PR:O74498"}


id: PATO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's motion characteristic.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flow rate","termid":"PATO:0001574"}


id: PBO:0045692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNLRB2 antisense RNA 1","termid":"PBO:0045692"}


id: GO:0043129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of a steady-state level of a surface-active agent that maintains the surface tension of a liquid.","definition_xrefs":["PMID:9751757","PMID:23708874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"surfactant homeostasis","secondary_identifiers":["GO:0050828"],"synonyms":[{"name":"regulation of liquid surface tension","type":"related"},{"name":"regulation of surface tension of a liquid","type":"related"},{"name":"surfactant activity","type":"related"}],"termid":"GO:0043129"}


id: PBO:0011983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simialr to S. pombe SPBC12C2.03c (paralog)","termid":"PBO:0011983"}


id: PBO:0083649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-beta-1,3-glucanase; major protein of the cell wall, involved in cell wall maintenance; involved in incorporation of newly synthesized mannoprotein molecules into the cell wall","termid":"PBO:0083649"}


id: GO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger (called a death ligand), and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic or necrotic cell death.","definition_xrefs":["GOC:rl","GOC:bf","GOC:mtg_apoptosis","PMID:10209153","GOC:ecd","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"death receptor activity","synonyms":[{"name":"apoptosis-activating receptor activity","type":"related"}],"termid":"GO:0005035"}


id: GO:0160040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A migrasome-mediated selective removal of damaged mitochondria process that maintains mitochondrion homeostasis in migrating cells.","definition_xrefs":["PMID:34108688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"migracytosis","termid":"GO:0140495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0007005"],"is_obsolete":false,"name":"mitocytosis","termid":"GO:0160040"}


id: PBO:0013131
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PUS1","termid":"PBO:0013131"}


id: PBO:0013744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter Mfs2 (predicted)","termid":"PBO:0013744"}


id: GO:1901373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid hydroperoxide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid hydroperoxide transport","termid":"GO:1901373"}


id: PBO:0027185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring","termid":"PBO:0027185"}


id: RO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","definition_xrefs":["GOC:cjm","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"RO:0002432"}


id: PBO:0087837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiosulfate sulfurtransferase; contains a rhodanese-like domain; localized to the mitochondrial outer membrane; protein abundance increases in response to DNA replication stress; similar to the human TSTD gene","termid":"PBO:0087837"}


id: PBO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 26","termid":"PBO:0080040"}


id: PBO:0038379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occurent_part_of","termid":"PBO:0038379"}


id: GO:0006997
data:
  {"annotated_genes":["SJAG_01050","SJAG_02286","SJAG_04578","SJAG_03592","SJAG_03783","SJAG_01460","SJAG_02763","SJAG_00883","SJAG_01242","SJAG_04936","SJAG_03219","SJAG_00900","SJAG_04271","SJAG_01075","SJAG_03891","SJAG_04464","SJAG_01833","SJAG_03182","SJAG_02045","SJAG_01579","SJAG_04972","SJAG_03313","SJAG_01745","SJAG_03892","SJAG_03844","SJAG_01613","SJAG_00840","SJAG_01906","SJAG_01370","SJAG_04319","SJAG_00680","SJAG_04883","SJAG_00416","SJAG_03491","SJAG_03940","SJAG_01356","SJAG_01467","SJAG_04509","SJAG_02210","SJAG_04489","SJAG_01422","SJAG_03449","SJAG_02778","SJAG_02737","SJAG_00810","SJAG_03982","SJAG_05207","SJAG_00934","SJAG_03593","SJAG_03073","SJAG_01834","SJAG_03200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112994,107525,84676,87109,83914,87488,95304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000742"},{"annotations":[89938,97511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[106389,93782,89146,105982,84047,94454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[106530],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[107076,115379,115171,115350],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[99228,102627,96969,115368,94056,115370,99813,115367,84109,92068,87446,115369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99750],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[87829,99814,106390,96676,106531,108808,115384],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006998"},{"annotations":[87447,114187],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[84677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[99543,103793,115268,88044,85212,87561,87448,105801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[92738],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"},{"annotations":[103837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051292"},{"annotations":[87817,103841,86259,102216,112520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006999"},{"annotations":[109360,110483,100173,88175,104230,103302,108172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleus.","definition_xrefs":["GOC:mah","GOC:ems","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00883":null,"SJAG_00900":null,"SJAG_00934":null,"SJAG_01050":null,"SJAG_01075":null,"SJAG_01242":null,"SJAG_01356":null,"SJAG_01370":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01579":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01906":null,"SJAG_02045":null,"SJAG_02210":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_02763":null,"SJAG_02778":null,"SJAG_03073":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03593":null,"SJAG_03783":null,"SJAG_03844":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_03982":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04936":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"secondary_identifiers":["GO:0048287"],"synonyms":[{"name":"nuclear morphology","type":"related"},{"name":"nuclear organisation","type":"exact"},{"name":"nuclear organization","type":"exact"},{"name":"nuclear organization and biogenesis","type":"related"},{"name":"nucleus organization and biogenesis","type":"related"}],"termid":"GO:0006997","terms_by_termid":{"GO:0000183":null,"GO:0000742":null,"GO:0006998":null,"GO:0006999":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0051292":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: PBO:0028879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2B-K119_ubiquitination","termid":"PBO:0028879"}


id: PBO:0089488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein","termid":"PBO:0089488"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: GO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.","definition_xrefs":["MetaCyc:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dihydroneopterin monophosphate phosphatase activity","secondary_identifiers":["RHEA:25306"],"synonyms":[{"name":"dihydroneopterin monophosphate dephosphorylase activity","type":"exact"}],"termid":"GO:0019176"}


id: GO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate + H2O = dolichol + phosphate.","definition_xrefs":["EC:3.1.3.51","MetaCyc:DOLICHYL-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"dolichyl-phosphatase activity","secondary_identifiers":["RHEA:13797"],"synonyms":[{"name":"Dol-P phosphatase activity","type":"related"},{"name":"Dol-P-P phosphohydrolase activity","type":"exact"},{"name":"dolichol monophosphatase activity","type":"related"},{"name":"dolichol phosphatase activity","type":"related"},{"name":"dolichol phosphate phosphatase activity","type":"related"},{"name":"dolichyl monophosphate phosphatase activity","type":"related"},{"name":"dolichyl phosphate phosphatase activity","type":"related"},{"name":"dolichyl pyrophosphate phosphatase activity","type":"exact"},{"name":"dolichyl-phosphate phosphohydrolase activity","type":"related"},{"name":"polyisoprenyl phosphate phosphatase activity","type":"related"},{"name":"polyprenylphosphate phosphatase activity","type":"related"}],"termid":"GO:0047873"}


id: GO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["UniProtKB-KW:KW-0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis","secondary_identifiers":["Wikipedia:Cytolysis"],"synonyms":[{"name":"autolysin activity","type":"related"},{"name":"bacteriocin activity","type":"related"},{"name":"bacteriolytic toxin activity","type":"related"},{"name":"holin","type":"related"},{"name":"lysin activity","type":"related"},{"name":"lysis","type":"broad"},{"name":"necrosis","type":"related"}],"termid":"GO:0019835"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: GO:0006419
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990762"},{"annotations":[89820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070143"}]},"cv_name":"biological_process","definition":"The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. The alanyl-tRNA synthetase is a class-II synthetases. The activated amino acid is transferred to the 3'-OH group of an alanine accetping tRNA.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"alanyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006419","terms_by_termid":{"GO:0070143":null,"GO:1990762":null}}


id: PBO:0059011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase like 1","termid":"PBO:0059011"}


id: GO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a root hair cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"},{"relation_name":"is_a","term_name":"trichoblast maturation","termid":"GO:0048764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell differentiation","termid":"GO:0048765"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: PBO:0028478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_growing_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028478"}


id: FYPO:0005204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity occurs to a greater extent than normal.","definition_xrefs":["PMID:9563836","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"increased activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"increased positive regulation of DNA polymerase activity","type":"broad"},{"name":"increased positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"related"},{"name":"increased positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0005204"}


id: PBO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_4-nitroquinoline_N-oxide","termid":"PBO:0030516"}


id: PBO:0063567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase B","termid":"PBO:0063567"}


id: PBO:0030281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_equatorial_microtubule_organizing_center","termid":"PBO:0030281"}


id: PBO:0058000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3924","termid":"PBO:0058000"}


id: PBO:0041262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q B chain","termid":"PBO:0041262"}


id: GO:1905939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gonad development.","definition_xrefs":["GO_REF:0000058","PMID:15342467","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gonad development","synonyms":[{"name":"regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905939"}


id: GO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to C-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["GOC:dph","GOC:kmv","PMID:18329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"C-rich strand telomeric DNA binding","termid":"GO:0061730"}


id: PR:Q9P789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein P35G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.14","synonyms":[{"name":"Spom972h-puf2","type":"exact"}],"termid":"PR:Q9P789"}


id: GO:0010758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage chemotaxis","termid":"GO:0010758"}


id: GO:0046037
data:
  {"annotated_genes":["SJAG_04634","SJAG_04849","SJAG_01298","SJAG_00964","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63673,98317],"is_not":false,"summary":null,"term":"GO:0046037"},{"annotations":[97268,59002,104337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP metabolism","type":"exact"}],"termid":"GO:0046037","terms_by_termid":{"GO:0006177":null,"GO:0032263":null,"GO:0046037":null}}


id: GO:0032038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin II heavy chain binding","termid":"GO:0032038"}


id: PBO:0042410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 23","termid":"PBO:0042410"}


id: PBO:0079834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine monophosphate synthetase","termid":"PBO:0079834"}


id: GO:0007548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the sex of an organism by physical differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex differentiation","secondary_identifiers":["Wikipedia:Sexual_differentiation"],"termid":"GO:0007548"}


id: PBO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y4","termid":"PBO:0070328"}


id: PATO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000832 relative visual acuity value (obsolete PATO:0000832)","termid":"PATO:0000832"}


id: PBO:0044980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 33","termid":"PBO:0044980"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: PBO:0069365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 625, pseudogene","termid":"PBO:0069365"}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: GO:0008365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of the chitin-based cuticle of adults following the apolysis of the pupal cuticle. The adult insect cuticle contains cuticullin, a protein epicuticle and a lamellate procuticle. An example of this process is adult chitin-based cuticle development in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle development","synonyms":[{"name":"adult chitin-based cuticle anabolism","type":"exact"},{"name":"adult chitin-based cuticle biosynthetic process","type":"exact"},{"name":"adult chitin-based cuticle formation","type":"exact"},{"name":"adult chitin-based cuticle synthesis","type":"exact"},{"name":"adult cuticle anabolism","type":"broad"},{"name":"adult cuticle biosynthetic process","type":"broad"},{"name":"adult cuticle formation","type":"broad"},{"name":"adult cuticle synthesis","type":"broad"}],"termid":"GO:0008365"}


id: PBO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Batten's disease","termid":"PBO:0001312"}


id: GO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized.","definition_xrefs":["GOC:dsf","GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system morphogenesis","synonyms":[{"name":"skeletal morphogenesis","type":"exact"}],"termid":"GO:0048705"}


id: PBO:0049002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase 1","termid":"PBO:0049002"}


id: PBO:0073274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN9 divergent transcript","termid":"PBO:0073274"}


id: GO:0070546
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080130"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-phenylalanine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-phenylalanine aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070546","terms_by_termid":{"GO:0080130":null}}


id: PBO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Dbl5","termid":"PBO:0013120"}


id: GO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species.","definition_xrefs":["GOC:krc","PMID:17786051"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing ATP as source of linkage phosphate (obsolete GO:0000969)","termid":"GO:0000969"}


id: PBO:0040726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 1","termid":"PBO:0040726"}


id: GO:0052857
data:
  {"annotated_genes":["SJAG_02462"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85440],"is_not":false,"summary":null,"term":"GO:0052857"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-NADPHX = (S)-NADPHX.","definition_xrefs":["PMID:21994945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"NADPHX epimerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.1.99.6","Reactome:R-HSA-6806966","RHEA:32227"],"termid":"GO:0052857","terms_by_termid":{"GO:0052857":null}}


id: SO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that always exists within the promoter region of a gene. When multiple transcripts exist for a gene, the separate transcripts may have separate core_promoter_elements.","definition_xrefs":["GREEKC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_promoter_element","synonyms":[{"name":"core promoter element","type":"exact"}],"termid":"SO:0002309"}


id: PBO:0057006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-99a-let-7c cluster host gene","termid":"PBO:0057006"}


id: PBO:0002454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 2 (predicted)","termid":"PBO:0002454"}


id: GO:0071739
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"IgD immunoglobulin complex, circulating","synonyms":[{"name":"IgD antibody","type":"exact"}],"termid":"GO:0071739"}


id: PBO:0071250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 91","termid":"PBO:0071250"}


id: PBO:0013808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103","termid":"PBO:0013808"}


id: GO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"mesoderm morphogenesis","termid":"GO:0048332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm formation","termid":"GO:0001707"}


id: PBO:0082063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase; member of a family of enoyl-CoA hydratase/isomerases; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; phosphorylated; mutation affects fluid-phase endocytosis","termid":"PBO:0082063"}


id: FYPO:0001570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glutathione level during vegetative growth","synonyms":[{"name":"decreased cellular GSH level during vegetative growth","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during vegetative growth","type":"exact"},{"name":"decreased cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"decreased cellular reduced glutathione level during vegetative growth","type":"exact"},{"name":"decreased glutathione accumulation during vegetative growth","type":"related"},{"name":"reduced cellular glutathione level during vegetative growth","type":"exact"}],"termid":"FYPO:0001570"}


id: PBO:0069077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 324, pseudogene","termid":"PBO:0069077"}


id: GO:0061629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence-specific DNA binding RNA polymerase II transcription factor, any of the factors that interact selectively and non-covalently with a specific DNA sequence in order to modulate transcription.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor binding","termid":"GO:0140297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase II-specific DNA-binding transcription factor binding","secondary_identifiers":["GO:0001103","GO:0001102","GO:0001085"],"synonyms":[{"name":"RNA polymerase II activating transcription factor binding","type":"related"},{"name":"RNA polymerase II repressing transcription factor binding","type":"related"},{"name":"RNA polymerase II sequence-specific DNA binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II sequence-specific DNA-binding transcription factor binding","type":"exact"},{"name":"RNA polymerase II transcription factor binding","type":"related"}],"termid":"GO:0061629"}


id: GO:0140339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to phosphatidylglycerol and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0120013"],"is_obsolete":false,"name":"phosphatidylglycerol transfer activity","synonyms":[{"name":"phosphatidylglycerol carrier activity","type":"exact"}],"termid":"GO:0140339"}


id: PBO:0088879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41 type 2a phosphatase regulator Tip41","termid":"PBO:0088879"}


id: GO:0061534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell, in which the gamma-aminobutyric acid acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"},{"relation_name":"part_of","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion, neurotransmission","termid":"GO:0061534"}


id: GO:0035384
data:
  {"annotated_genes":["SJAG_02006","SJAG_00866","SJAG_04007","SJAG_02158","SJAG_01402","SJAG_02741","SJAG_03313","SJAG_03290","SJAG_00982","SJAG_03064","SJAG_03731","SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94474,89346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[95115,114480,83578,104659,110300,91104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[103540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester metabolic process","termid":"GO:0035383"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01402":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02741":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03731":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"thioester biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thioester anabolism","type":"exact"},{"name":"thioester biosynthesis","type":"exact"},{"name":"thioester formation","type":"exact"},{"name":"thioester synthesis","type":"exact"}],"termid":"GO:0035384","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0019427":null,"GO:0035338":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0091181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 1","termid":"PBO:0091181"}


id: PBO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 127","termid":"PBO:0042064"}


id: PBO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4L antisense RNA 1","termid":"PBO:0044684"}


id: PBO:0064979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 35, pseudogene","termid":"PBO:0064979"}


id: PBO:0038454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate-semialdehyde synthase","termid":"PBO:0038454"}


id: GO:0036495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"negative regulation of translation in response to endoplasmic reticulum stress","termid":"GO:1902010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"negative regulation of translation initiation in response to ER stress","type":"related"}],"termid":"GO:0036495"}


id: GO:0055103
data:
  {"annotated_genes":["SJAG_03494","SJAG_00177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990609"},{"annotations":[101797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180016"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ligase.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ligase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055103","terms_by_termid":{"GO:0180016":null,"GO:1990609":null}}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19332:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: GO:0071193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP2 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-KChIP2 channel complex","secondary_identifiers":["CORUM:607"],"termid":"GO:0071193"}


id: PBO:0055728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 2","termid":"PBO:0055728"}


id: PBO:0073392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 6 pseudogene 1","termid":"PBO:0073392"}


id: FYPO:0003807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria form branched structures.","definition_xrefs":["PMID:19373772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"net-like mitochondrial morphology","synonyms":[{"name":"branched mitochondria","type":"exact"},{"name":"branched mitochondria during vegetative growth","type":"exact"},{"name":"branched mitochondrion","type":"exact"}],"termid":"FYPO:0003807"}


id: GO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic trimming involved in rRNA processing (obsolete GO:0000459)","synonyms":[{"name":"exonucleolytic trimming during rRNA processing","type":"related"}],"termid":"GO:0000459"}


id: GO:1903488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lactation.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:19563620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lactation","termid":"GO:1903487"},{"relation_name":"negatively_regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lactation","synonyms":[{"name":"down regulation of lactation","type":"exact"},{"name":"down-regulation of lactation","type":"exact"},{"name":"downregulation of lactation","type":"exact"},{"name":"inhibition of lactation","type":"narrow"}],"termid":"GO:1903488"}


id: PBO:0091873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pho84 repressing sense RNA Prt2","termid":"PBO:0091873"}


id: GO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"IMP catabolic process","synonyms":[{"name":"IMP breakdown","type":"exact"},{"name":"IMP catabolism","type":"exact"},{"name":"IMP degradation","type":"exact"}],"termid":"GO:0006204"}


id: PBO:0071592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 9","termid":"PBO:0071592"}


id: GO:1905820
data:
  {"annotated_genes":["SJAG_02380","SJAG_01679","SJAG_02451","SJAG_03048","SJAG_03350","SJAG_04573","SJAG_00883","SJAG_00145","SJAG_01837","SJAG_02336","SJAG_01805","SJAG_00666","SJAG_02498","SJAG_01297","SJAG_04259","SJAG_04968","SJAG_02169","SJAG_03126","SJAG_03681","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109851,110330,86843,108022,104320,99975,103298,95669,111957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[91259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[89906,96216,98463,110331,98189,107436,93794,110829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[112735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[95691,93795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromosome separation.","definition_xrefs":["GO_REF:0000058","PMID:21795393","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"positively_regulates","term_name":"chromosome separation","termid":"GO:0051304"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromatid release","type":"related"},{"name":"activation of chromosome separation","type":"narrow"},{"name":"activation of rDNA separation","type":"narrow"},{"name":"positive regulation of chromatid release","type":"related"},{"name":"positive regulation of rDNA separation","type":"narrow"},{"name":"up regulation of chromatid release","type":"related"},{"name":"up regulation of chromosome separation","type":"exact"},{"name":"up regulation of rDNA separation","type":"narrow"},{"name":"up-regulation of chromatid release","type":"related"},{"name":"up-regulation of chromosome separation","type":"exact"},{"name":"up-regulation of rDNA separation","type":"narrow"},{"name":"upregulation of chromatid release","type":"related"},{"name":"upregulation of chromosome separation","type":"exact"},{"name":"upregulation of rDNA separation","type":"narrow"}],"termid":"GO:1905820","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1901970":null,"GO:1902426":null,"GO:1905191":null,"GO:1905824":null}}


id: GO:0005159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin-like growth factor receptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin-like growth factor receptor binding","secondary_identifiers":["GO:0005067"],"synonyms":[{"name":"IGF receptor binding","type":"exact"},{"name":"insulin-like growth factor","type":"narrow"},{"name":"insulin-like growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005159"}


id: PBO:0088372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiprotein bridging factor Mbf1","termid":"PBO:0088372"}


id: PBO:0074557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 10","termid":"PBO:0074557"}


id: PBO:0090393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD finger protein Cph1","termid":"PBO:0090393"}


id: GO:0048219
data:
  {"annotated_genes":["SJAG_04739"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94195],"is_not":false,"summary":null,"term":"GO:0048219"}]},"cv_name":"biological_process","definition":"The directed movement of substances from one Golgi cisterna to another, mediated by small transport vesicles.","definition_xrefs":["GOC:jid","GOC:mah","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"inter-Golgi cisterna vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inter-Golgi cisterna transport","type":"exact"}],"termid":"GO:0048219","terms_by_termid":{"GO:0048219":null}}


id: PBO:0038878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 5","termid":"PBO:0038878"}


id: GO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate.","definition_xrefs":["EC:3.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"arylesterase activity","secondary_identifiers":["RHEA:17309","UM-BBD_reactionID:r0757","MetaCyc:ARYLESTERASE-RXN"],"synonyms":[{"name":"A-esterase activity","type":"broad"},{"name":"aromatic esterase","type":"narrow"},{"name":"aryl-ester hydrolase","type":"narrow"},{"name":"paraoxonase activity","type":"broad"}],"termid":"GO:0004064"}


id: PBO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (predicted)","termid":"PBO:0002196"}


id: PBO:0063092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAQR9 antisense RNA 1","termid":"PBO:0063092"}


id: GO:2000227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"negatively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic A cell differentiation","synonyms":[{"name":"negative regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000227"}


id: PBO:0071651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 15","termid":"PBO:0071651"}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: GO:1902272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"}


id: PBO:0052826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 126, pseudogene","termid":"PBO:0052826"}


id: GO:0046327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"glycerol biosynthetic process","termid":"GO:0006114"},{"relation_name":"part_of","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glycerol biosynthetic process from pyruvate","synonyms":[{"name":"glycerol anabolism from pyruvate","type":"exact"},{"name":"glycerol formation from pyruvate","type":"exact"},{"name":"glycerol synthesis from pyruvate","type":"exact"},{"name":"glyceroneogenesis","type":"exact"}],"termid":"GO:0046327"}


id: GO:0005452
data:
  {"annotated_genes":["SJAG_01183","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107032],"is_not":false,"summary":null,"term":"GO:0005452"},{"annotations":[98937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion(out) + solute(in) = inorganic anion (in) + solute(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"solute:inorganic anion antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5656248","Reactome:R-HSA-1237038","Reactome:R-HSA-427666","Reactome:R-HSA-1247665","Reactome:R-HSA-425577","Reactome:R-HSA-425482","Reactome:R-HSA-5627737"],"synonyms":[{"name":"inorganic anion exchanger activity","type":"exact"}],"termid":"GO:0005452","terms_by_termid":{"GO:0005452":null,"GO:0140987":null}}


id: GO:0035581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining an extracellular signaling ligand, such that the ligand is unable to bind to its cell surface receptor.","definition_xrefs":["GOC:BHF","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular negative regulation of signal transduction","termid":"GO:1900116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of extracellular ligand from receptor","synonyms":[{"name":"extracellular sequestering of receptor ligand","type":"exact"},{"name":"negative regulation of protein bioavailability","type":"related"}],"termid":"GO:0035581"}


id: GO:0034582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-4-methyloctanoyl-CoA = 4-methyl-3-oxooctanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-hydroxy-4-methyloctanoyl-CoA dehydrogenase activity","termid":"GO:0034582"}


id: FYECO:0000224
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which histidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ his","synonyms":[{"name":"histidine added","type":"exact"}],"termid":"FYECO:0000224"}


id: PBO:0005426
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional septation initiation network required","termid":"PBO:0005426"}


id: GO:1905105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ouabain stimulus.","definition_xrefs":["PMID:23643758","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to ouabain (obsolete GO:1905105)","termid":"GO:1905105"}


id: GO:0044431
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the Golgi apparatus, a compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi apparatus part (obsolete GO:0044431)","synonyms":[{"name":"Golgi component","type":"exact"},{"name":"Golgi subcomponent","type":"exact"}],"termid":"GO:0044431"}


id: PBO:0061192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 2","termid":"PBO:0061192"}


id: GO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:aruk","PMID:20005821","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of astrocyte differentiation","termid":"GO:0048710"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte activation","termid":"GO:0061888"}


id: PBO:0070181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 96 pseudogene","termid":"PBO:0070181"}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: PBO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2","termid":"PBO:0045994"}


id: PBO:0062453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 125 pseudogene","termid":"PBO:0062453"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: PBO:0049236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 7","termid":"PBO:0049236"}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: GO:1902972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA ligation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication DNA ligation","termid":"GO:1902333"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"premeiotic DNA replication DNA ligation","synonyms":[{"name":"DNA ligation involved in meiotic DNA replication","type":"exact"},{"name":"DNA ligation involved in meiotic cell cycle DNA replication","type":"related"}],"termid":"GO:1902972"}


id: PBO:0046500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exoribonuclease 1","termid":"PBO:0046500"}


id: FYPO:0001146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of misfolded glycoprotein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased misfolded glycoprotein degradation during vegetative growth","synonyms":[{"name":"decreased misfolded glycoprotein catabolic process during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein catabolism during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein degradation during mitotic cell cycle","type":"related"},{"name":"reduced misfolded glycoprotein degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0001146"}


id: PBO:0077557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM263 divergent transcript","termid":"PBO:0077557"}


id: GO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine O-sulfate + H2O = pyruvate + NH3 + sulfate.","definition_xrefs":["MetaCyc:SERINE-SULFATE-AMMONIA-LYASE-RXN","EC:4.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"serine-sulfate ammonia-lyase activity","secondary_identifiers":["RHEA:15605"],"synonyms":[{"name":"(L-SOS)lyase activity","type":"related"},{"name":"L-serine-O-sulfate ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"serine-sulphate ammonia-lyase activity","type":"exact"}],"termid":"GO:0050283"}


id: PBO:0048415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA3 antisense RNA 1","termid":"PBO:0048415"}


id: GO:0009141
data:
  {"annotated_genes":["SJAG_03852","SJAG_00027","SJAG_02135","SJAG_00915","SJAG_00438","SJAG_02369","SJAG_02105","SJAG_04422","SJAG_01471","SJAG_02009","SJAG_04849","SJAG_06621","SJAG_00705","SJAG_02796","SJAG_04657","SJAG_03114","SJAG_03676","SJAG_02564","SJAG_MIT37","SJAG_03373","SJAG_00633","SJAG_02598","SJAG_00885","SJAG_03660","SJAG_MIT09","SJAG_07003","SJAG_00412","SJAG_03903","SJAG_00605","SJAG_01298","SJAG_05314","SJAG_04122","SJAG_00836","SJAG_04334","SJAG_00985","SJAG_05204","SJAG_00685","SJAG_04495","SJAG_02887","SJAG_05024","SJAG_06622","SJAG_04048","SJAG_MIT15","SJAG_03708","SJAG_04487","SJAG_04192","SJAG_00133","SJAG_00461","SJAG_00533","SJAG_00136","SJAG_00542","SJAG_02107","SJAG_00964","SJAG_04665","SJAG_00839","SJAG_01310","SJAG_03797","SJAG_02038","SJAG_02945","SJAG_03828","SJAG_03925","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107901],"is_not":false,"summary":null,"term":"GO:0009141"},{"annotations":[83942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[92710,94227,95000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[99469,101515,101880,104993,104997,90624,104999,105462,112410,94092,104996,105464,105466,101881,104998,101516,91114,99727,104995,105463,94364,104994,101517,100538,105460,105461,105465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[96149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[89058,110971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[114623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[95072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[85509,88537,114047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[95074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[100540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94281,107639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[104338,98318,96150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[75022,71987],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[66430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[115076,115071,99738,99117,111901,103880,99767,85263,90941,103970,89969,104854,89370,88945,97895,115080,101065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[103330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[114027],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[102581,96151,89516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic 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triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009141","terms_by_termid":{"GO:0006096":null,"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009141":null,"GO:0009204":null,"GO:0009212":null,"GO:0009216":null,"GO:0015986":null,"GO:0035863":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046034":null,"GO:0046036":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: GO:0006077
data:
  {"annotated_genes":["SJAG_02446","SJAG_02590","SJAG_00771","SJAG_04073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90315,86717,112605,98536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->6)-beta-D-glucans, compounds composed of glucose residues linked by (1->6)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00771":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,6-beta-glucan metabolic process","type":"exact"},{"name":"1,6-beta-glucan metabolism","type":"exact"},{"name":"beta-1,6 glucan metabolic process","type":"exact"},{"name":"beta-1,6 glucan metabolism","type":"exact"}],"termid":"GO:0006077","terms_by_termid":{"GO:0006078":null}}


id: GO:0009571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a proplastid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"proplastid","termid":"GO:0009537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proplastid stroma","termid":"GO:0009571"}


id: PBO:0042923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 1","termid":"PBO:0042923"}


id: PBO:0017818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 Prp19","termid":"PBO:0017818"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: GO:0070802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metula development","termid":"GO:0070802"}


id: PBO:0004654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mde2 protein","termid":"PBO:0004654"}


id: GO:0043746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-aminoadipate semialdehyde + L-glutamate = 2-oxoglutarate + N2-acetyl-L-lysine.","definition_xrefs":["IMG:01450"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-lysine aminotransferase activity (obsolete GO:0043746)","synonyms":[{"name":"N-acetyl-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043746"}


id: PBO:0059244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14 pseudogene 1","termid":"PBO:0059244"}


id: GO:0141052
data:
  {"annotated_genes":["SJAG_03664","SJAG_03286","SJAG_02401","SJAG_03997","SJAG_03635","SJAG_01465","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83545,108297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[92754,109127,83547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[108298,113786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[90186,99315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:17947579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone demethylase activity","termid":"GO:0032452"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0032452","GO:0003674"],"is_obsolete":false,"name":"histone H3 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141052","terms_by_termid":{"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: PBO:0054193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1568","termid":"PBO:0054193"}


id: GO:2000557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immunoglobulin production in mucosal tissue.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"immunoglobulin production in mucosal tissue","termid":"GO:0002426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of immunoglobulin production in mucosal tissue","synonyms":[{"name":"regulation of antibody production in mucosal tissue","type":"exact"}],"termid":"GO:2000557"}


id: PBO:0056878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial contact site and cristae organizing system subunit 10","termid":"PBO:0056878"}


id: PBO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA,poly(A)-bearing (predicted)","termid":"PBO:0000116"}


id: PBO:0063270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 16","termid":"PBO:0063270"}


id: GO:1990688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a Golgi vesicle to the lipid bilayer membrane of the ERGIC. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","termid":"GO:1990668"},{"relation_name":"part_of","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"Golgi vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"Golgi vesicle fusion with ERGIC membrane","type":"exact"}],"termid":"GO:1990688"}


id: PBO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 6","termid":"PBO:0050671"}


id: PBO:0003582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0003582"}


id: GO:0061035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cartilage development","termid":"GO:0061035"}


id: GO:0016668
data:
  {"annotated_genes":["SJAG_03653","SJAG_01162","SJAG_05027","SJAG_04399","SJAG_00489","SJAG_01693","SJAG_02016","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91154],"is_not":false,"summary":null,"term":"GO:0016668"},{"annotations":[83581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004148"},{"annotations":[101285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[102858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047134"},{"annotations":[83928,113517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004783"},{"annotations":[78226,106161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00489":null,"SJAG_01162":null,"SJAG_01693":null,"SJAG_02016":null,"SJAG_03290":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016654","EC:1.8.1.-"],"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on NADH or NADPH, disulphide as acceptor","type":"exact"},{"name":"oxidoreductase activity, acting on a sulfur group of donors, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, acting on sulphur group of donors, NAD or NADP as acceptor","type":"exact"}],"termid":"GO:0016668","terms_by_termid":{"GO:0004148":null,"GO:0004362":null,"GO:0004783":null,"GO:0004791":null,"GO:0016668":null,"GO:0047134":null}}


id: GO:0003942
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94259],"is_not":false,"summary":null,"term":"GO:0003942"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-glutamate 5-semialdehyde + NADP+ + phosphate = N-acetyl-5-glutamyl phosphate + NADPH + H+.","definition_xrefs":["RHEA:21588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.2.1.38","MetaCyc:N-ACETYLGLUTPREDUCT-RXN"],"synonyms":[{"name":"N-acetyl-L-glutamate gamma-semialdehyde:NADP oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-L-glutamate-5-semialdehyde:NADP+ 5-oxidoreductase (phosphorylating)","type":"related"},{"name":"N-acetyl-glutamate semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamate 5-semialdehyde dehydrogenase activity","type":"related"},{"name":"N-acetylglutamic gamma-semialdehyde dehydrogenase activity","type":"related"},{"name":"NAGSA dehydrogenase activity","type":"broad"},{"name":"reductase, acetyl-gamma-glutamyl phosphate","type":"related"}],"termid":"GO:0003942","terms_by_termid":{"GO:0003942":null}}


id: GO:0120506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 2 S-adenosyl-L-methionine = 2H+ + N6,N6-methyl-L-lysyl79-[histone H3] + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15371351","PMID:14732680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0008276","GO:0016741","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K79 dimethyltransferase activity","termid":"GO:0120506"}


id: PBO:0088266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase domain protein","termid":"PBO:0088266"}


id: PBO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Tvp23 (predicted)","termid":"PBO:0004276"}


id: GO:0075526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription initiation process during which a nucleotide sequence between 10 and 20 nucleotides in size is cleaved from the 5' end of host mRNAs by a viral RNA-dependent polymerase. The capped leader sequence obtained is subsequently used to prime transcription on the viral genome, which ultimately leads to the synthesis of capped, translatable viral mRNAs.","definition_xrefs":["GOC:bf","VZ:839","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"negative stranded viral RNA transcription","termid":"GO:0039697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cap snatching","synonyms":[{"name":"cap snatching involved in viral mRNA transcription","type":"exact"}],"termid":"GO:0075526"}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: PBO:0066363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RD3 like","termid":"PBO:0066363"}


id: PBO:0080669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 21, pseudogene","termid":"PBO:0080669"}


id: PBO:0089320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3, implicated in negative regulation of ubiquitinated chromatin formation","termid":"PBO:0089320"}


id: PBO:0085837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress; YKR018C has a paralog, IML2, that arose from the whole genome duplication","termid":"PBO:0085837"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: GO:0019504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline.","definition_xrefs":["PMID:24520058","PMID:10689197","PMID:1804402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"L-proline betaine metabolic process","termid":"GO:0019502"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-proline betaine catabolic process","secondary_identifiers":["MetaCyc:P561-PWY"],"synonyms":[{"name":"stachydrine breakdown","type":"exact"},{"name":"stachydrine catabolic process","type":"exact"},{"name":"stachydrine catabolism","type":"exact"},{"name":"stachydrine degradation","type":"exact"}],"termid":"GO:0019504"}


id: GO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive energy taxis","termid":"GO:0052128"}


id: PBO:0004300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis protein Abc1/Coq8","termid":"PBO:0004300"}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: GO:0090572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase III promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III transcription repressor complex","termid":"GO:0090572"}


