# terms

id: PBO:0051071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-18","termid":"PBO:0051071"}


id: GO:0006957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, alternative pathway","synonyms":[{"name":"complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0006957"}


id: GO:0010478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A respiratory electron flow (from NAD(P)H to plastoquinone (PQ) and O2) involving both a nonphotochemical reduction and re-oxidation of PQ pool.","definition_xrefs":["GOC:mtg_electron_transport","PMID:17573537","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"chlororespiration","termid":"GO:0010478"}


id: PBO:0055609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3048","termid":"PBO:0055609"}


id: GO:2000467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycogen (starch) synthase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of glycogen (starch) synthase activity","termid":"GO:2000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycogen (starch) synthase activity","synonyms":[{"name":"positive regulation of UDP-glucose-glycogen glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of UDP-glycogen synthase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen synthetase activity","type":"exact"},{"name":"positive regulation of UDPG-glycogen transglucosylase activity","type":"exact"},{"name":"positive regulation of UDPglucose:glycogen 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"positive regulation of glycogen (starch) synthetase activity","type":"exact"},{"name":"positive regulation of uridine diphosphoglucose-glycogen glucosyltransferase activity","type":"exact"}],"termid":"GO:2000467"}


id: PBO:0088310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase Ape2","termid":"PBO:0088310"}


id: PBO:0081558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 480","termid":"PBO:0081558"}


id: GO:0120212
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A centrosome-based structure consisting of two cylindrical microtubule-based centrioles and associated components which anchors the flagellum to the sperm head.","definition_xrefs":["GOC:krc","PMID:30032984","PMID:24415959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm head-tail coupling apparatus","secondary_identifiers":["MP:0009830"],"synonyms":[{"name":"HTCA","type":"related"},{"name":"head-tail coupling apparatus","type":"exact"},{"name":"implantation fossa","type":"related"},{"name":"sperm connecting piece","type":"related"},{"name":"sperm neck","type":"related"}],"termid":"GO:0120212"}


id: GO:0030253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are secreted into the extracellular milieu via the type I secretion system; secretion occurs in a continuous process without the distinct presence of periplasmic intermediates and does not involve proteolytic processing of secreted proteins.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type I secretion system","synonyms":[{"name":"protein secretion by the TOSS","type":"exact"},{"name":"protein secretion by the type I protein secretion system","type":"exact"},{"name":"type I protein secretion system","type":"exact"}],"termid":"GO:0030253"}


id: GO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"C21-steroid hormone biosynthetic process","synonyms":[{"name":"C21-steroid hormone anabolism","type":"exact"},{"name":"C21-steroid hormone biosynthesis","type":"exact"},{"name":"C21-steroid hormone formation","type":"exact"},{"name":"C21-steroid hormone synthesis","type":"exact"}],"termid":"GO:0006700"}


id: GO:0050664
data:
  {"annotated_genes":["SJAG_05033","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78077,104592],"is_not":false,"summary":null,"term":"GO:0050664"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["EC:1.6.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor","type":"related"}],"termid":"GO:0050664","terms_by_termid":{"GO:0050664":null}}


id: PBO:0001843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase catalytic subunit Dpm1","termid":"PBO:0001843"}


id: PBO:0068403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 222","termid":"PBO:0068403"}


id: PBO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX interactor 1, dimerization protein","termid":"PBO:0060222"}


id: SO:0002368
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for plastid SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_rRNA_gene","termid":"SO:0002366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_SSU_rRNA_gene","synonyms":[{"name":"plastid small subunit rRNA gene","type":"exact"}],"termid":"SO:0002368"}


id: GO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + H2O = (2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate + methanol. A carboxylesterase that hydrolyzes the ester linkage of juvenile hormone.","definition_xrefs":["RHEA:16393","PMID:11267890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"juvenile-hormone esterase activity","secondary_identifiers":["MetaCyc:JUVENILE-HORMONE-ESTERASE-RXN","EC:3.1.1.59"],"synonyms":[{"name":"JH esterase activity","type":"related"},{"name":"JH-esterase activity","type":"related"},{"name":"juvenile hormone analog esterase activity","type":"related"},{"name":"juvenile hormone carboxyesterase activity","type":"related"},{"name":"methyl-(2E,6E)-(10R,11S)-10,11-epoxy-3,7,11-trimethyltrideca-2,6-dienoate acylhydrolase activity","type":"related"}],"termid":"GO:0004453"}


id: PBO:0012033
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC3H7.11 is related to the N-terminal region of YOR239W","termid":"PBO:0012033"}


id: PBO:0028949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip","termid":"PBO:0028949"}


id: PBO:0063001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestagen associated endometrial protein pseudogene 1","termid":"PBO:0063001"}


id: PBO:0076165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 1","termid":"PBO:0076165"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: SO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7_methylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_methylguanosine","secondary_identifiers":["RNAMOD:031"],"synonyms":[{"name":"7-methylguanosine","type":"exact"},{"name":"m7G","type":"exact"},{"name":"seven methylguanosine","type":"exact"}],"termid":"SO:0001326"}


id: PBO:0065294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 1","termid":"PBO:0065294"}


id: GO:0075016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a swollen, flattened portion of a symbiont filament is formed on or near its host organism, to adhere to and for the purpose of penetrating the host surface.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium formation","synonyms":[{"name":"appressorium formation for entry into host, on or near host","type":"exact"},{"name":"appressorium formation on or near host","type":"related"},{"name":"formation of an appressorium by symbiont on or near host","type":"exact"}],"termid":"GO:0075016"}


id: PBO:0040313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 7","termid":"PBO:0040313"}


id: GO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epistomal sclerite are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"epistomal sclerite development","termid":"GO:0048724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite morphogenesis","termid":"GO:0048719"}


id: GO:0099024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An infolding of the plasma membrane.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane invagination","termid":"GO:0010324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane invagination","termid":"GO:0099024"}


id: GO:0017042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycosyl-N-acylsphingosine + H2O = a sugar + N-acylsphingosine.","definition_xrefs":["PMID:10692580","PMID:9762914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glycosylceramidase activity","secondary_identifiers":["EC:3.2.1.62","MetaCyc:RXN-22900","MetaCyc:GALACTOSYLCERAMIDASE-RXN","MetaCyc:GLYCOSYLCERAMIDASE-RXN"],"synonyms":[{"name":"cerebrosidase activity","type":"related"},{"name":"glycosyl ceramide glycosylhydrolase activity","type":"related"},{"name":"glycosyl-N-acylsphingosine glycohydrolase activity","type":"related"}],"termid":"GO:0017042"}


id: GO:0033102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an acidocalcisome.","definition_xrefs":["GOC:ecd","PMID:11378195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"acidocalcisome","termid":"GO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"acidocalcisome membrane","termid":"GO:0033102"}


id: PBO:0079278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 2","termid":"PBO:0079278"}


id: PBO:0085337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoglucomutase; catalyzes the conversion from glucose-1-phosphate to glucose-6-phosphate, which is a key step in hexose metabolism; functions as the acceptor for a Glc-phosphotransferase; protein abundance increases in response to DNA replication stress; PGM2 has a paralog, PGM1, that arose from the whole genome duplication","termid":"PBO:0085337"}


id: GO:0070178
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["CHEBI:16523","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-serine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-serine metabolism","type":"exact"}],"termid":"GO:0070178","terms_by_termid":{"GO:0036088":null}}


id: GO:0097640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-ornithine import across plasma membrane","secondary_identifiers":["GO:1903411"],"synonyms":[{"name":"L-ornithine import into cell","type":"exact"}],"termid":"GO:0097640"}


id: PBO:0084392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs; also enters the nucleus and positively regulates transcription initiation; unlike most Sm-like proteins, Lsm1p requires both its SM-domain and C-terminal domain for RNA-binding; binds to mRNAs under glucose starvation, most often in the 3' UTR; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0084392"}


id: GO:0009663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["GOC:mah","PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmodesma organization","synonyms":[{"name":"plasmodesma organisation","type":"exact"},{"name":"plasmodesma organization and biogenesis","type":"related"},{"name":"plasmodesmata organization and biogenesis","type":"related"}],"termid":"GO:0009663"}


id: PBO:0039383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelotin","termid":"PBO:0039383"}


id: PBO:0047773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box B2","termid":"PBO:0047773"}


id: GO:0045347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class II biosynthetic process","termid":"GO:0045346"},{"relation_name":"negatively_regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class II biosynthetic process","synonyms":[{"name":"down regulation of MHC class II biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class II biosynthetic process","type":"exact"},{"name":"downregulation of MHC class II biosynthetic process","type":"exact"},{"name":"inhibition of MHC class II biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class II anabolism","type":"exact"},{"name":"negative regulation of MHC class II biosynthesis","type":"exact"},{"name":"negative regulation of MHC class II formation","type":"exact"},{"name":"negative regulation of MHC class II synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045347"}


id: GO:0016750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"succinyltransferase activity","termid":"GO:0016748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"O-succinyltransferase activity","termid":"GO:0016750"}


id: PATO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001101 stiffness value (obsolete PATO:0001101)","termid":"PATO:0001101"}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: PBO:0054839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2253","termid":"PBO:0054839"}


id: PR:O42709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc23 gene.","definition_xrefs":["UniProtKB:O42709","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.10","synonyms":[{"name":"Spom972h-cdc23","type":"exact"},{"name":"cdc23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42709"}


id: PBO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phosphate phosphatase Gep4 (predicted)","termid":"PBO:0034808"}


id: PBO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit, Spc105/KNL-1 family member, blinkin, Spc7","termid":"PBO:0018138"}


id: GO:0090133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"},{"relation_name":"part_of","term_name":"mesendoderm development","termid":"GO:0048382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm migration","termid":"GO:0090133"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: PBO:0075690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 1 pseudogene 1","termid":"PBO:0075690"}


id: PBO:0081376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 214","termid":"PBO:0081376"}


id: GO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant RNAs within the cytoplasm.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic RNA surveillance","synonyms":[{"name":"cytoplasmic RNA quality control","type":"exact"},{"name":"cytoplasmic aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071026"}


id: GO:0018511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2,3-dihydroxy-2,3-dihydro-p-cumate + NAD+ = 2,3-dihydroxy-p-cumate + H+ + NADH.","definition_xrefs":["EC:1.3.1.58","RHEA:23772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0396","KEGG_REACTION:R05240","MetaCyc:RXN-665"],"synonyms":[{"name":"cis-2,3-dihydroxy-2,3-dihydro-p-cumate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018511"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of symbiont process","synonyms":[{"name":"modification by host of symbiont morphology or physiology","type":"related"}],"termid":"GO:0051851"}


id: PBO:0043725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 4","termid":"PBO:0043725"}


id: PBO:0065141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin","termid":"PBO:0065141"}


id: GO:0160053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of new phosphodiester bonds between a pair of short, unique DNA target sequences; occurs through a phosphoseryl intermediate in which the target sequence is first cleaved by the nucleophilic attack by a serine in the active site.","definition_xrefs":["PMID:29316791","PMID:16756503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific recombinase activity","termid":"GO:0009009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"serine-based site-specific recombinase activity","termid":"GO:0160053"}


id: GO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. Examples include legs, arms or some types of fin.","definition_xrefs":["GOC:dph","PMID:11487378","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb development","secondary_identifiers":["Wikipedia:Limb_development"],"synonyms":[{"name":"limb bud development","type":"narrow"},{"name":"paired limb/fin development","type":"exact"}],"termid":"GO:0060173"}


id: GO:0102457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-vanilloyl-beta-D-glucose = H+ + cyanidin 3,7-di-O-beta-D-glucoside betaine + vanillate.","definition_xrefs":["GOC:pz","EC:2.4.1.300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 7-O-glucosyltransferase (vanilloyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-13969","RHEA:35431"],"termid":"GO:0102457"}


id: GO:0015352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of sterol from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete secondary active sterol transmembrane transporter activity (obsolete GO:0015352)","synonyms":[{"name":"sterol porter activity","type":"related"}],"termid":"GO:0015352"}


id: PBO:0072797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 3","termid":"PBO:0072797"}


id: GO:0031490
data:
  {"annotated_genes":["SJAG_00698","SJAG_00164","SJAG_00861","SJAG_00585","SJAG_05333","SJAG_04879","SJAG_01827","SJAG_03354","SJAG_02815","SJAG_03944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91638,103067,106020,107193,110465],"is_not":false,"summary":null,"term":"GO:0031490"},{"annotations":[102991,95663,105207,111425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[107952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Binding to DNA that is assembled into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"},{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00585":null,"SJAG_00698":null,"SJAG_00861":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03354":null,"SJAG_03944":null,"SJAG_04879":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"chromatin DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031490","terms_by_termid":{"GO:0031490":null,"GO:0043035":null,"GO:0140585":null}}


id: GO:0021637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"trigeminal nerve morphogenesis","termid":"GO:0021636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal nerve structural organization","synonyms":[{"name":"CN V structural organization","type":"related"},{"name":"trigeminal nerve structural organisation","type":"exact"}],"termid":"GO:0021637"}


id: PBO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament-based_movement","termid":"PBO:0035754"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: PBO:0064546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 8, pseudogene","termid":"PBO:0064546"}


id: PBO:0041991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34 pseudogene 1","termid":"PBO:0041991"}


id: PBO:0081966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZPR1 pseudogene 1","termid":"PBO:0081966"}


id: PBO:0053394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 323","termid":"PBO:0053394"}


id: PBO:0034058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinates","termid":"PBO:0034058"}


id: PBO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 3","termid":"PBO:0052125"}


id: PBO:0074582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2A","termid":"PBO:0074582"}


id: PBO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT ortholog 2","termid":"PBO:0003030"}


id: PBO:0066863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 163","termid":"PBO:0066863"}


id: PBO:0074037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 22","termid":"PBO:0074037"}


id: GO:0070691
data:
  {"annotated_genes":["SJAG_03061","SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104943,105103],"is_not":false,"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"A dimeric positive transcription elongation factor complex b that comprises a cyclin-dependent kinase containing the catalytic subunit, Cdk9, and a regulatory subunit, cyclin T.","definition_xrefs":["GOC:mah","Wikipedia:P-TEFb","PMID:16721054","GOC:vw","PMID:19328067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin/CDK positive transcription elongation factor complex","termid":"GO:0008024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01213":null,"SJAG_03061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"P-TEFb complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Bur1/Bur2 complex","type":"narrow"},{"name":"Sgv1/Bur2 complex","type":"narrow"},{"name":"cyclin-dependent kinase 9 (Cdk9)-cyclin T1 complex","type":"narrow"},{"name":"cyclin-dependent kinase 9 (Cdk9)-cyclin T2 complex","type":"narrow"},{"name":"dimeric positive transcription elongation factor complex b","type":"related"}],"termid":"GO:0070691","terms_by_termid":{"GO:0070691":null}}


id: PBO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoribonuclease (predicted)","termid":"PBO:0003335"}


id: GO:1903748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["PMID:16857185","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"negatively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"down regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"down-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"downregulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"inhibition of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"inhibition of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"negative regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"negative regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903748"}


id: PBO:0074102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 5","termid":"PBO:0074102"}


id: PBO:0066734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 31","termid":"PBO:0066734"}


id: GO:0008192
data:
  {"annotated_genes":["SJAG_04233","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[113841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"RNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008192","terms_by_termid":{"GO:0004484":null,"GO:0008193":null}}


id: PR:O13282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19879:SF0","PRO:DNx","OMA:SCHPO04393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.03c","secondary_identifiers":["UniProtKB:O13282"],"synonyms":[{"name":"Spom972h-TAF5","type":"exact"},{"name":"TAFII-72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 72 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13282"}


id: PBO:0018098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15 Mrp15 (predicted)","termid":"PBO:0018098"}


id: PATO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having the border, edge, or outline cut into a series of segments of circles resembling a scallop-shell.","definition_xrefs":["Oxford:EnglishDictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scalloped","synonyms":[{"name":"crenate","type":"exact"},{"name":"crenulate","type":"exact"}],"termid":"PATO:0001889"}


id: GO:0008818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide-GDP + alpha-ribazole-5'-phosphate = adenosylcobalamin-5'-phosphate + GMP.","definition_xrefs":["MetaCyc:COBALAMIN5PSYN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cobalamin 5'-phosphate synthase activity","secondary_identifiers":["RHEA:23560"],"termid":"GO:0008818"}


id: PBO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8 (predicted)","termid":"PBO:0000795"}


id: GO:0007402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a ganglion mother cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion mother cell fate determination","termid":"GO:0007402"}


id: GO:0030507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"spectrin binding","termid":"GO:0030507"}


id: PATO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000852 relative auditory threshold (obsolete PATO:0000852)","termid":"PATO:0000852"}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["GOC:dos","PMID:20098723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: PR:Q10659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane glycoprotein spo14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.01","synonyms":[{"name":"SEC12-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo14","type":"exact"},{"name":"sporulation-specific protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10659"}


id: PBO:0057534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 650","termid":"PBO:0057534"}


id: PBO:0072823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1","termid":"PBO:0072823"}


id: GO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic genitalia morphogenesis","synonyms":[{"name":"embryonic genital morphogenesis","type":"related"}],"termid":"GO:0030538"}


id: FYPO:0004533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal beta-glucan level","termid":"FYPO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cell wall beta-glucan level","synonyms":[{"name":"normal cell wall beta-D-glucan level","type":"exact"},{"name":"normal cell wall beta-glucan accumulation","type":"related"},{"name":"normal cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004533"}


id: PATO:0001576
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pressure which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pressure","termid":"PATO:0001025"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased pressure","synonyms":[{"name":"high pressure","type":"exact"}],"termid":"PATO:0001576"}


id: PBO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXC cluster antisense RNA 1","termid":"PBO:0050501"}


id: PBO:0067329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 420, pseudogene","termid":"PBO:0067329"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: SO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a chromosomal insertion,.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_attribute","synonyms":[{"name":"insertion attribute","type":"exact"}],"termid":"SO:0001512"}


id: GO:0001561
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107900],"is_not":false,"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"A metabolic pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway.","definition_xrefs":["PMID:10198260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"fatty acid oxidation","termid":"GO:0019395"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid alpha-oxidation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-2501"],"termid":"GO:0001561","terms_by_termid":{"GO:0001561":null}}


id: GO:1902768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoprenoid via 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GO_REF:0000092","PMID:23746261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isoprenoid biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","synonyms":[{"name":"isoprenoid anabolism via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid biosynthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid formation via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isoprenoid synthesis via 1-deoxy-D-xylulose 5-phosphate","type":"exact"}],"termid":"GO:1902768"}


id: PR:Q9UT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug28 gene.","definition_xrefs":["UniProtKB:Q9UT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 28 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.07","synonyms":[{"name":"Spom972h-mug28","type":"exact"}],"termid":"PR:Q9UT83"}


id: FYPO:0007031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips  does not occur during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell tip during mitotic interphase","termid":"FYPO:0003329"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006502"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cell cortex of cell tip during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cell cortex of cell tip during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell cortex of cell end during mitotic interphase during vegetative growth","type":"related"},{"name":"abolished protein localization to cell cortex of cell tip during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to cell tip cortex during mitotic interphase","type":"exact"},{"name":"protein localization to cell cortex of cell tip abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007031"}


id: GO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast development","termid":"GO:0048884"}


id: GO:0051587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of dopamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine uptake involved in synaptic transmission","termid":"GO:0051585"},{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of dopamine uptake involved in synaptic transmission","synonyms":[{"name":"inhibition of dopamine import involved in synaptic transmission","type":"exact"}],"termid":"GO:0051587"}


id: PBO:0044389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily B member 6","termid":"PBO:0044389"}


id: FYPO:0006360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a greater extent than normal in regions of pericentric heterochromatin.","definition_xrefs":["PMID:26438724","GO:0005721","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein exchange at pericentric heterochromatin","synonyms":[{"name":"increased protein exchange at centromeric heterochromatin","type":"exact"},{"name":"increased protein exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased protein exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"increased protein motility on centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0006360"}


id: GO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of activation-induced cell death of T cells.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activation-induced cell death of T cells","synonyms":[{"name":"regulation of AICD","type":"broad"},{"name":"regulation of activated T cell apoptosis","type":"broad"},{"name":"regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"regulation of antigen-driven apoptosis","type":"broad"}],"termid":"GO:0070235"}


id: PR:O74341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.08c","secondary_identifiers":["UniProtKB:O74341"],"synonyms":[{"name":"CCT-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT3","type":"exact"},{"name":"TCP-1-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74341"}


id: PBO:0048144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD6-FXYD2 readthrough","termid":"PBO:0048144"}


id: PBO:0054244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1626","termid":"PBO:0054244"}


id: PBO:0063784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10","termid":"PBO:0063784"}


id: PBO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor Nxt2","termid":"PBO:0001533"}


id: PBO:0075402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17 pseudogene 1","termid":"PBO:0075402"}


id: PBO:0014593
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA Maintenance","termid":"PBO:0014593"}


id: GO:0045427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via (phospho-5'-guanosine)-L-histidine (obsolete GO:0045427)","termid":"GO:0045427"}


id: GO:1990299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a Bub1-Bub3 complex; as a result, the complex is transported to, or maintained in, a specific location at the kinetochore.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Bub1-Bub3 complex localization to kinetochore","termid":"GO:1990299"}


id: GO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phylloquinone, a quinone-derived compound synthesized by green plants. Phylloquinone has vitamin K activity and is known as vitamin K1.","definition_xrefs":["GOC:jl","PMID:27337968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"phylloquinone metabolic process","synonyms":[{"name":"phylloquinone metabolism","type":"exact"},{"name":"phytomenadione metabolic process","type":"exact"},{"name":"phytomenadione metabolism","type":"exact"},{"name":"phytonadione metabolic process","type":"exact"},{"name":"phytonadione metabolism","type":"exact"},{"name":"phytylmenaquinone metabolic process","type":"exact"},{"name":"phytylmenaquinone metabolism","type":"exact"},{"name":"vitamin K1 metabolic process","type":"exact"},{"name":"vitamin K1 metabolism","type":"exact"}],"termid":"GO:0042374"}


id: PBO:0079367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 1","termid":"PBO:0079367"}


id: PBO:0070283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 24","termid":"PBO:0070283"}


id: GO:0002891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"positively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin mediated immune response","synonyms":[{"name":"activation of immunoglobulin mediated immune response","type":"narrow"},{"name":"stimulation of immunoglobulin mediated immune response","type":"narrow"},{"name":"up regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"up-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"upregulation of immunoglobulin mediated immune response","type":"exact"}],"termid":"GO:0002891"}


id: PBO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_acetylation_during_vegetative_growth","termid":"PBO:0035922"}


id: GO:0046687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chromate","synonyms":[{"name":"chromate sensitivity/resistance","type":"related"}],"termid":"GO:0046687"}


id: PBO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase Tgs1 (predicted)","termid":"PBO:0000624"}


id: GO:0030845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway which proceeds with inhibition of phospholipase C (PLC) activity and a subsequent decrease in the levels of cellular inositol trisphosphate (IP3) and diacylglycerol (DAG).","definition_xrefs":["GOC:dph","GOC:tb","GOC:signaling","GOC:mah","PMID:8280098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-inhibiting G protein-coupled receptor signaling pathway","synonyms":[{"name":"G-protein-coupled inhibitory pathway of phospholipase C","type":"exact"},{"name":"GPCR signaling pathway coupled to inhibition of phospholipase C activity","type":"exact"},{"name":"GPCR signaling pathway via inhibition of PLC","type":"exact"},{"name":"PLC-inhibiting GPCR signaling pathway","type":"exact"},{"name":"inhibition of phospholipase C activity involved in G-protein coupled receptor signalling pathway","type":"narrow"},{"name":"phospholipase C inhibition","type":"related"},{"name":"phospholipase C-inhibiting G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0030845"}


id: GO:0180027
data:
  {"annotated_genes":["SJAG_05022","SJAG_03345","SJAG_04612","SJAG_03657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83952,85394,99496,109054],"is_not":false,"summary":null,"term":"GO:0180027"}]},"cv_name":"biological_process","definition":"A protein quality control pathway that removes ubiquitinated proteins from the nuclear inner membrane before transferring them to the proteasome for degradation.","definition_xrefs":["PMID:37694715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein quality control by the ubiquitin-proteasome system","termid":"GO:0071630"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_03657":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"inner nuclear membrane-associated protein degradation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"INMAD pathway","type":"exact"}],"termid":"GO:0180027","terms_by_termid":{"GO:0180027":null}}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: PBO:0029635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_growth","termid":"PBO:0029635"}


id: GO:0046516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"hypusine metabolic process","synonyms":[{"name":"hypusine metabolism","type":"exact"}],"termid":"GO:0046516"}


id: GO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors and decreases the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of the force of heart contraction by chemical signal","termid":"GO:0003108"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by acetylcholine","synonyms":[{"name":"decreased force of heart contraction by acetylcholine","type":"exact"}],"termid":"GO:0003060"}


id: GO:0072502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of trivalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular trivalent inorganic anion homeostasis (obsolete GO:0072502)","termid":"GO:0072502"}


id: PBO:0051006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 4","termid":"PBO:0051006"}


id: PBO:0030509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protein_kinase_inhibitor","termid":"PBO:0030509"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0073403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 6","termid":"PBO:0073403"}


id: PR:P40379
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator protein rec16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.06","synonyms":[{"name":"Spom972h-rep1","type":"exact"},{"name":"zinc finger protein rep1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40379"}


id: PBO:0077087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 2","termid":"PBO:0077087"}


id: PBO:0062538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 3 pseudogene","termid":"PBO:0062538"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: PBO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1A","termid":"PBO:0043672"}


id: PBO:0073501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine rich tetratricopeptide repeat co-chaperone beta","termid":"PBO:0073501"}


id: PBO:0072958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCEL antisense RNA 1","termid":"PBO:0072958"}


id: PBO:0004804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress Responsive Orphan","termid":"PBO:0004804"}


id: GO:0009229
data:
  {"annotated_genes":["SJAG_03362","SJAG_04282","SJAG_04866","SJAG_00381","SJAG_02421","SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90395,95607,109662,109668,110079,112086],"is_not":false,"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"thiamine diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP biosynthesis","type":"exact"},{"name":"TPP biosynthetic process","type":"exact"},{"name":"thiamin diphosphate biosynthetic process","type":"exact"},{"name":"thiamin pyrophosphate biosynthesis","type":"exact"},{"name":"thiamin pyrophosphate biosynthetic process","type":"exact"},{"name":"thiamine diphosphate anabolism","type":"exact"},{"name":"thiamine diphosphate biosynthesis","type":"exact"},{"name":"thiamine diphosphate formation","type":"exact"},{"name":"thiamine diphosphate synthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthetic process","type":"exact"}],"termid":"GO:0009229","terms_by_termid":{"GO:0009229":null}}


id: PBO:0016093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csi1","termid":"PBO:0016093"}


id: PBO:0017942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transmembrane transporter Can1","termid":"PBO:0017942"}


id: PBO:0056307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 3","termid":"PBO:0056307"}


id: PBO:0066539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 5","termid":"PBO:0066539"}


id: GO:0097641
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113404],"is_not":false,"summary":null,"term":"GO:0097641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate (alpha-ketoglutarate) + O2 + xanthine = CO2 + succinate + urate.","definition_xrefs":["GOC:vw","PMID:17429948","RHEA:43120","PMID:15948966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate-dependent xanthine dioxygenase activity","type":"exact"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine dioxygenase activity","type":"related"},{"name":"alpha-ketoglutarate- and Fe(II)-dependent xanthine hydroxylase activity","type":"related"}],"termid":"GO:0097641","terms_by_termid":{"GO:0097641":null}}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: PBO:0049813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 5","termid":"PBO:0049813"}


id: PBO:0038343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_on_by","termid":"PBO:0038343"}


id: PBO:0025449
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine transcarbamylase deficiency","termid":"PBO:0025449"}


id: FYPO:0001568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutamate level","synonyms":[{"name":"increased cellular L-glutamate level","type":"exact"},{"name":"increased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamate level during vegetative growth","type":"exact"},{"name":"increased glutamate accumulation","type":"related"}],"termid":"FYPO:0001568"}


id: GO:0061431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methionine stimulus.","definition_xrefs":["GOC:dph","PMID:7891681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to methionine","termid":"GO:1904640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methionine","termid":"GO:0061431"}


id: PBO:0051534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4","termid":"PBO:0051534"}


id: PBO:0089916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5","termid":"PBO:0089916"}


id: GO:0034457
data:
  {"annotated_genes":["SJAG_03252","SJAG_02372","SJAG_02681"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87613,87782,89792],"is_not":false,"summary":null,"term":"GO:0034457"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a subcomplex of the 90S preribosome. In S. cerevisiae, it is composed of Mpp10p, Imp3p and Imp4p.","definition_xrefs":["PMID:17515605","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02372":null,"SJAG_02681":null,"SJAG_03252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0005730","GO:0032991","GO:0005634","GO:0030684"],"is_obsolete":false,"name":"Mpp10 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034457","terms_by_termid":{"GO:0034457":null}}


id: PR:Q9Y7Z5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 33 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetra-spanning protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.04","secondary_identifiers":["UniProtKB:Q9Y7Z5"],"synonyms":[{"name":"Spom972h-TMEM33","type":"exact"}],"termid":"PR:Q9Y7Z5"}


id: PBO:0074845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36B","termid":"PBO:0074845"}


id: PBO:0078307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 3-1","termid":"PBO:0078307"}


id: PBO:0108624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosome assembly protein Rsm22 fusion protein","termid":"PBO:0108624"}


id: PR:Q9P792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nbr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZZ-type zinc finger-containing protein P35G2.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.11c","synonyms":[{"name":"Spom972h-nbr1","type":"exact"}],"termid":"PR:Q9P792"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: PATO:0000974
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000974 relative porosity (obsolete PATO:0000974)","termid":"PATO:0000974"}


id: PBO:0059832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal response element binding transcription factor 2","termid":"PBO:0059832"}


id: GO:0019854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006766","GO:0005975","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"L-ascorbic acid catabolic process","secondary_identifiers":["MetaCyc:PWY0-301"],"synonyms":[{"name":"L-ascorbic acid breakdown","type":"exact"},{"name":"L-ascorbic acid catabolism","type":"exact"},{"name":"L-ascorbic acid degradation","type":"exact"},{"name":"ascorbate catabolic process","type":"exact"},{"name":"ascorbate catabolism","type":"exact"},{"name":"vitamin C catabolic process","type":"exact"},{"name":"vitamin C catabolism","type":"exact"}],"termid":"GO:0019854"}


id: GO:0007494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midgut over time, from its formation to the mature structure. The midgut is the middle part of the alimentary canal from the stomach, or entrance of the bile duct, to, or including, the large intestine.","definition_xrefs":["GOC:jid","UBERON:0001045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midgut development","termid":"GO:0007494"}


id: PBO:0085146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar serine-rich protein; role in preribosome assembly or transport; may function as a chaperone of small nucleolar ribonucleoprotein particles (snoRNPs); immunologically and structurally to rat Nopp140","termid":"PBO:0085146"}


id: PBO:0080307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 71 pseudogene","termid":"PBO:0080307"}


id: PBO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILK associated serine/threonine phosphatase","termid":"PBO:0051624"}


id: GO:0110119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of very-low-density lipoprotein particle clearance.","definition_xrefs":["GOC:BHF","PMID:25510864","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle clearance","termid":"GO:0110119"}


id: PBO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, 3'-phosphoadenosine 5'-phosphosulfate/ 5'-adenylyl sulfate Mrx21","termid":"PBO:0090092"}


id: PBO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_cell_cycle_phase","termid":"PBO:0031157"}


id: PBO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps29","termid":"PBO:0002200"}


id: PBO:0004197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Aps2 (predicted)","termid":"PBO:0004197"}


id: PBO:0017003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR95","termid":"PBO:0017003"}


id: GO:0141076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a TRAF-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22407319","PMID:20335533","PMID:31311877"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host TRAF-mediated signal transduction (obsolete GO:0141076)","synonyms":[{"name":"disruption of host TRAF-mediated signal transduction","type":"exact"},{"name":"inhibition of host TRAF-mediated signal transduction","type":"exact"},{"name":"inhibition of host TRAFs","type":"narrow"},{"name":"negative regulation of host TRAF-mediated signal transduction","type":"exact"},{"name":"suppression of host TRAF activity","type":"narrow"},{"name":"suppression of host TRAF-mediated signal transduction","type":"exact"},{"name":"suppression of host tumor necrosis factor receptor-associated factor signaling","type":"exact"},{"name":"symbiont-mediated suppression of host TRAF-mediated signal transduction","type":"related"}],"termid":"GO:0141076"}


id: PBO:0049899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD2 antisense RNA 1","termid":"PBO:0049899"}


id: PBO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 4","termid":"PBO:0042900"}


id: PBO:0044255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biogenesis 43 C-terminal homolog","termid":"PBO:0044255"}


id: PR:O94623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein REV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11076:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rev1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.01c","secondary_identifiers":["UniProtKB:O94623"],"synonyms":[{"name":"SPBC1347.01c","type":"related"},{"name":"Spom972h-REV1","type":"exact"},{"name":"reversionless protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94623"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: GO:0098580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Chromatin that is part of an active sex chromosome.","definition_xrefs":["GOC:dos","PMID:23816838"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin of active sex chromosome (obsolete GO:0098580)","termid":"GO:0098580"}


id: GO:0033599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland epithelial cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland epithelial cell proliferation","termid":"GO:0033599"}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: PBO:0077559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 266","termid":"PBO:0077559"}


id: FYPO:0007910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a vegetative cell has a reduced volume or dimensions compared to a size previously observed for the same cell.","definition_xrefs":["PMID:19189958","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vegetative cell shrinkage","termid":"FYPO:0007910"}


id: PBO:0044792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 5","termid":"PBO:0044792"}


id: PBO:0059440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A10","termid":"PBO:0059440"}


id: PBO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle_assembly","termid":"PBO:0031484"}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: PBO:0056952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-17-92a-1 cluster host gene","termid":"PBO:0056952"}


id: PBO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (predicted)","termid":"PBO:0005077"}


id: PBO:0043084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic beta 4 subunit","termid":"PBO:0043084"}


id: PBO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR48 family Bun107","termid":"PBO:0000346"}


id: PBO:0091443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Staurosporine-related Protein Kinase","termid":"PBO:0091443"}


id: FYPO:0004488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of one or more lysine residues in specific proteins, or at specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein acetylation during vegetative growth","termid":"FYPO:0002392"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein lysine methylation during vegetative growth","synonyms":[{"name":"abolished peptidyl-lysine methylation during vegetative growth","type":"exact"},{"name":"abolished protein acetylation during mitotic cell cycle","type":"related"},{"name":"protein lysine methylation abolished during vegetative growth","type":"exact"},{"name":"protein lysine methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004488"}


id: GO:1905554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF_telomere","PMID:23201774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"negatively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vessel branching","synonyms":[{"name":"down regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down regulation of patterning of blood vessels","type":"exact"},{"name":"down-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down-regulation of patterning of blood vessels","type":"exact"},{"name":"downregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"downregulation of patterning of blood vessels","type":"exact"},{"name":"inhibition of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"inhibition of patterning of blood vessels","type":"narrow"},{"name":"negative regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905554"}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["UniProtKB:O14109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: PBO:0111682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase implicated in lipid catobolism or detoxification","termid":"PBO:0111682"}


id: PBO:0086424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative haloacid dehalogenase-like hydrolase; non-essential gene; overexpression causes a cell cycle delay or arrest; protein abundance increases in response to DNA replication stress","termid":"PBO:0086424"}


id: PBO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT3 interacting zinc finger 1","termid":"PBO:0047634"}


id: PR:Q9Y7N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-amino-acid oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino-acid oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.07c","secondary_identifiers":["UniProtKB:Q9Y7N4"],"synonyms":[{"name":"DAAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAMOX (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAO (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DAO","type":"exact"}],"termid":"PR:Q9Y7N4"}


id: PBO:0029520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_septated_spheroid_cells_(obsolete_FYPO:0002194)","termid":"PBO:0029520"}


id: PBO:0051823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2","termid":"PBO:0051823"}


id: GO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode larval development","termid":"GO:0061062"}


id: PBO:0067092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 128, pseudogene","termid":"PBO:0067092"}


id: GO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the importin-alpha family.","definition_xrefs":["PMID:15350979","PMID:17170104","PMID:23734157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"importin-alpha family protein binding","termid":"GO:0061676"}


id: PBO:0081005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 42","termid":"PBO:0081005"}


id: GO:0008791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + L-arginine = CoA + N2-succinyl-L-arginine.","definition_xrefs":["EC:2.3.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"arginine N-succinyltransferase activity","secondary_identifiers":["RHEA:15185","MetaCyc:ARGININE-N-SUCCINYLTRANSFERASE-RXN"],"synonyms":[{"name":"AOST activity","type":"related"},{"name":"AST activity","type":"related"},{"name":"AstA","type":"related"},{"name":"arginine and ornithine N(2)-succinyltransferase activity","type":"related"},{"name":"arginine and ornithine N2-succinyltransferase activity","type":"related"},{"name":"arginine succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine 2-N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:L-arginine N2-succinyltransferase activity","type":"related"}],"termid":"GO:0008791"}


id: GO:0102875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:2-2-18:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-18:2-2-18:2-monogalactosyldiacylglycerol desaturase activity","secondary_identifiers":["EC:1.14.19.35","MetaCyc:RXN-8366"],"termid":"GO:0102875"}


id: GO:0021858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic inhibitory neuron in the basal ganglia. Differentiation includes the processes involved in commitment of a neuroblast to a GABAergic neuron.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph","PMID:16226447","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation in basal ganglia","termid":"GO:0021858"}


id: PBO:0083285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified genes STE18 and ECM2","termid":"PBO:0083285"}


id: GO:0009590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gravitational stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gravity","synonyms":[{"name":"perception of gravity","type":"related"}],"termid":"GO:0009590"}


id: PBO:0043184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine inducible SH2 containing protein","termid":"PBO:0043184"}


id: PATO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000835 auditory acuity value (obsolete PATO:0000835)","termid":"PATO:0000835"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: GO:0015349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of thyroid hormones from one side of a membrane to the other. Thyroid hormone are any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"thyroid hormone transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-9631987","Reactome:R-HSA-879575"],"termid":"GO:0015349"}


id: PATO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castrated male","termid":"PATO:0002367"}


id: GO:0035528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine in glycosidic linkage with uridine diphosphate, that contribute to the biosynthesis of chitin.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-N-acetylglucosamine biosynthesis involved in chitin biosynthesis (obsolete GO:0035528)","synonyms":[{"name":"UDP-GlcNAc biosynthesis involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthesis","type":"exact"},{"name":"UDP-GlcNAc biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine anabolism involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine biosynthetic process involved in chitin biosynthetic process","type":"exact"},{"name":"UDP-N-acetylglucosamine formation involved in chitin biosynthesis","type":"exact"},{"name":"UDP-N-acetylglucosamine synthesis involved in chitin biosynthesis","type":"exact"}],"termid":"GO:0035528"}


id: FYPO:0004747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cortical patches at one or both cell tips than normal during early mitosis (before anaphase).","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"actin cortical patches present in increased numbers at cell tip during early mitosis","synonyms":[{"name":"F-actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"accumulation of actin cortical patches at cell tip during early mitosis","type":"related"},{"name":"actin cortical patches in increased numbers at cell tip during early mitosis during vegetative growth","type":"exact"},{"name":"actin cortical patches present in greater numbers at cell tip during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell end during early mitosis","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during cell growth during early mitotic nuclear division","type":"exact"},{"name":"actin cortical patches present in increased numbers at cell tip during early mitosis during mitotic cell cycle","type":"related"},{"name":"actin patches present in increased numbers at cell tip during early mitosis","type":"exact"},{"name":"additional actin cortical patches present at cell tip during early mitosis","type":"exact"},{"name":"extra actin cortical patches at cell tip during early mitosis","type":"exact"},{"name":"increased number of actin patches at cell tip in early mitosis","type":"exact"}],"termid":"FYPO:0004747"}


id: GO:0043224
data:
  {"annotated_genes":["SJAG_02162","SJAG_02591","SJAG_00341","SJAG_02651","SJAG_03219","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86725,90451,93870,100928,105150,106388],"is_not":false,"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the nucleus, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear SCF complex","type":"exact"},{"name":"nuclear Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"nuclear cullin complex","type":"exact"}],"termid":"GO:0043224","terms_by_termid":{"GO:0043224":null}}


id: PBO:0016125
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene is located in the silent mating type region, it is only transcribed when at the mat1 locus, see mat1-Mc","termid":"PBO:0016125"}


id: PBO:0081550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 470","termid":"PBO:0081550"}


id: GO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of only SMAD proteins; may be homomeric or heteromeric. Heteromeric complexes act as transcription factors while homomeric complexes exist but are transcriptionally inactive. Hetero- versus homotrimerization is largely enthalpy driven.","definition_xrefs":["PMID:9670020","GOC:bhm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SMAD protein complex","synonyms":[{"name":"SMAD complex","type":"exact"}],"termid":"GO:0071141"}


id: GO:0036132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 15-keto-prostaglandin + NAD(P)H + H+ -> 13,14-dihydro-15-keto-prostaglandin + NAD(P)+. This reaction is the reduction of 15-keto-prostaglandin.","definition_xrefs":["PMID:17449869","EC:1.3.1.48","GOC:mw","KEGG_REACTION:R04556","KEGG_REACTION:R04557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"13-prostaglandin reductase activity","secondary_identifiers":["Reactome:R-HSA-2161692"],"synonyms":[{"name":"15-ketoprostaglandin delta13-reductase activity","type":"related"},{"name":"15-oxo-delta13-prostaglandin reductase activity","type":"related"},{"name":"15-oxoprostaglandin 13-reductase activity","type":"exact"},{"name":"delta13-15-ketoprostaglandin reductase activity","type":"related"},{"name":"prostaglandin 13-reductase activity","type":"related"},{"name":"prostaglandin delta13-reductase activity","type":"related"}],"termid":"GO:0036132"}


id: PBO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2 Dlp1","termid":"PBO:0002346"}


id: PBO:0076154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 2","termid":"PBO:0076154"}


id: PBO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member D","termid":"PBO:0043280"}


id: PBO:0056152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule actin crosslinking factor 1","termid":"PBO:0056152"}


id: FYPO:0003868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains fewer mitochondria than normal during G0 phase.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondria present in decreased numbers during G0","synonyms":[{"name":"decreased number of mitochondria during G0","type":"exact"},{"name":"fewer mitochondria during G0","type":"exact"},{"name":"mitochondria present in decreased numbers during cell quiescence","type":"exact"},{"name":"mitochondria present in decreased numbers during quiescence","type":"exact"},{"name":"mitochondria present in reduced numbers during G0","type":"exact"}],"termid":"FYPO:0003868"}


id: PBO:0050657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 7, pseudogene","termid":"PBO:0050657"}


id: GO:1990602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which functions to transport the importin alpha-subunit into the nucleus through the nuclear pore to facilitate another round of mRNP incorporation and regulation. In Drosophila it consists of Cdm (Imp13), Mago and Tsu (Y14).","definition_xrefs":["GOC:bhm","PMID:20122403"],"gene_count":0,"genotype_count":0,"name":"obsolete importin alpha-subunit nuclear import complex (obsolete GO:1990602)","synonyms":[{"name":"Cdm-Mago-Tsu complex","type":"narrow"},{"name":"Importin13-Mago-Tsu complex","type":"narrow"}],"termid":"GO:1990602"}


id: GO:0047677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8R,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["RHEA:14985","EC:1.13.11.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arachidonate 8(R)-lipoxygenase activity","secondary_identifiers":["MetaCyc:ARACHIDONATE-8-LIPOXYGENASE-RXN","KEGG_REACTION:R01594"],"synonyms":[{"name":"8(R)-lipoxygenase activity","type":"related"},{"name":"8-lipoxygenase activity","type":"narrow"},{"name":"arachidonate 8-lipoxygenase activity","type":"broad"},{"name":"arachidonate:oxygen 8-oxidoreductase activity","type":"related"}],"termid":"GO:0047677"}


id: GO:1990674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the cis portion of the Golgi complex.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi cis cisterna","termid":"GO:0000137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi cis cisterna membrane","synonyms":[{"name":"Golgi apparatus cis cisterna membrane","type":"exact"},{"name":"cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990674"}


id: GO:1901216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:TermGenie","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of neuron death (obsolete GO:1901216)","synonyms":[{"name":"activation of neuron cell death","type":"narrow"},{"name":"activation of neuron death","type":"narrow"},{"name":"activation of neuronal cell death","type":"narrow"},{"name":"positive regulation of neuron cell death","type":"exact"},{"name":"positive regulation of neuronal cell death","type":"exact"},{"name":"up regulation of neuron cell death","type":"exact"},{"name":"up regulation of neuron death","type":"exact"},{"name":"up regulation of neuronal cell death","type":"exact"},{"name":"up-regulation of neuron cell death","type":"exact"},{"name":"up-regulation of neuron death","type":"exact"},{"name":"up-regulation of neuronal cell death","type":"exact"},{"name":"upregulation of neuron cell death","type":"exact"},{"name":"upregulation of neuron death","type":"exact"},{"name":"upregulation of neuronal cell death","type":"exact"}],"termid":"GO:1901216"}


id: PBO:0003083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor G (predicted)","termid":"PBO:0003083"}


id: GO:0072687
data:
  {"annotated_genes":["SJAG_03048","SJAG_03926","SJAG_03073","SJAG_00460","SJAG_01613","SJAG_02320","SJAG_04745","SJAG_03540","SJAG_05196","SJAG_01805","SJAG_02241","SJAG_03989","SJAG_04140","SJAG_02286","SJAG_00930","SJAG_03915","SJAG_01546","SJAG_04412","SJAG_01837","SJAG_03681","SJAG_01464","SJAG_04623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85491,89890,90863,98432,99360,103887,107252,109293,111960,112726,114679],"is_not":false,"summary":null,"term":"GO:0072687"},{"annotations":[83907],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990574"},{"annotations":[112727,99623,114713,97498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990385"},{"annotations":[90864,95294,98892,92863,87391,103159,114854,89891,95975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of meiosis. Several proteins, such as budding yeast Spo21p, fission yeast Spo2 and Spo13, and C. elegans mei-1, localize specifically to the meiotic spindle and are absent from the mitotic spindle.","definition_xrefs":["GOC:vw","GOC:mah","PMID:11408572","PMID:18367542","PMID:8027178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00930":null,"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02241":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03681":null,"SJAG_03915":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072687","terms_by_termid":{"GO:0072687":null,"GO:0090619":null,"GO:1990385":null,"GO:1990574":null}}


id: PBO:0055591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3027","termid":"PBO:0055591"}


id: GO:1902269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of polyamine transmembrane transport","termid":"GO:1902267"},{"relation_name":"positively_regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of polyamine transmembrane transport","synonyms":[{"name":"activation of polyamine transmembrane transport","type":"narrow"},{"name":"up regulation of polyamine transmembrane transport","type":"exact"},{"name":"up-regulation of polyamine transmembrane transport","type":"exact"},{"name":"upregulation of polyamine transmembrane transport","type":"exact"}],"termid":"GO:1902269"}


id: PR:O13699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug132 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 132 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.06c","synonyms":[{"name":"Spom972h-mug132","type":"exact"}],"termid":"PR:O13699"}


id: GO:0060360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of leucine import as a result of an ammonium ion stimulus. Leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-leucine import across plasma membrane","termid":"GO:1905533"},{"relation_name":"part_of","term_name":"cellular response to ammonium ion","termid":"GO:0071242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of leucine import in response to ammonium ion","synonyms":[{"name":"negative regulation of leucine uptake in response to ammonium ion","type":"exact"}],"termid":"GO:0060360"}


id: GO:0106417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopaminechrome = 5,6-dihydroxyindole.","definition_xrefs":["RHEA:70199","PMID:34388859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"dopaminechrome tautomerase activity","termid":"GO:0106417"}


id: PBO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor","termid":"PBO:0060879"}


id: PBO:0076207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 17","termid":"PBO:0076207"}


id: PBO:0079621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L6","termid":"PBO:0079621"}


id: GO:0099404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which telomeres of sister chromatids are joined during mitosis.","definition_xrefs":["GOC:BHF_telomere","GOC:mah","GOC:rph","PMID:26373281","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion, telomeric","synonyms":[{"name":"mitotic sister chromatid cohesion at telomere","type":"exact"},{"name":"sister chromatid cohesion at telomere at mitosis","type":"exact"},{"name":"telomeric mitotic sister chromatin cohesion","type":"exact"}],"termid":"GO:0099404"}


id: GO:1902763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"negatively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic skeletal joint development","synonyms":[{"name":"down regulation of embryonic skeletal joint development","type":"exact"},{"name":"down-regulation of embryonic skeletal joint development","type":"exact"},{"name":"downregulation of embryonic skeletal joint development","type":"exact"},{"name":"inhibition of embryonic skeletal joint development","type":"narrow"}],"termid":"GO:1902763"}


id: GO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sub-structure within the large single mitochondrion of kinetoplastid parasites and which is closely associated with the flagellar pocket and basal body of the flagellum.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"kinetoplast","secondary_identifiers":["Wikipedia:Kinetoplast"],"termid":"GO:0020023"}


id: PR:Q9URX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C922.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.06","synonyms":[{"name":"Spom972h-SPAC922.06","type":"exact"}],"termid":"PR:Q9URX0"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: GO:0071167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex import into nucleus (obsolete GO:0071167)","synonyms":[{"name":"RNP import into nucleus","type":"exact"},{"name":"ribonucleoprotein complex import into cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus import","type":"exact"},{"name":"ribonucleoprotein complex targeting to nucleus","type":"exact"},{"name":"ribonucleoprotein complex transport from cytoplasm to nucleus","type":"exact"},{"name":"ribonucleoprotein import into nucleus","type":"exact"}],"termid":"GO:0071167"}


id: PBO:0039940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3A","termid":"PBO:0039940"}


id: SO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Polypeptide region present in the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"part_of","term_name":"membrane_structure","termid":"SO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intramembrane_polypeptide_region","secondary_identifiers":["BS:00156"],"synonyms":[{"name":"intramembrane","type":"related"},{"name":"intramembrane polypeptide region","type":"exact"}],"termid":"SO:0001075"}


id: _global:regulates_o_results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that applies between a process that regulates the specification of some cell type or structure and the specified cell type or structure.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_specification_of","secondary_identifiers":["GOREL:0001027"],"synonyms":[{"name":"regulates_o_results_in_specification_of","type":"exact"}],"termid":"_global:regulates_o_results_in_specification_of"}


id: PBO:0029085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_clotrimazole","termid":"PBO:0029085"}


id: PBO:0054364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1757","termid":"PBO:0054364"}


id: PBO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1","termid":"PBO:0039689"}


id: PBO:0076011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 2","termid":"PBO:0076011"}


id: GO:0032078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"negative regulation of deoxyribonuclease activity","termid":"GO:0032076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodeoxyribonuclease activity","synonyms":[{"name":"down regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of endodeoxyribonuclease activity","type":"exact"},{"name":"endodeoxyribonuclease inhibitor","type":"related"},{"name":"inhibition of endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0032078"}


id: GO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein metabolic process","synonyms":[{"name":"down regulation of lipoprotein metabolic process","type":"exact"},{"name":"down-regulation of lipoprotein metabolic process","type":"exact"},{"name":"downregulation of lipoprotein metabolic process","type":"exact"},{"name":"inhibition of lipoprotein metabolic process","type":"narrow"},{"name":"negative regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050748"}


id: PBO:0061987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily B member 7 pseudogene","termid":"PBO:0061987"}


id: GO:1903218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["PMID:12398416","GOC:sart","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","synonyms":[{"name":"regulation of 'malic' enzyme","type":"related"},{"name":"regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"regulation of NADP-malic enzyme activity","type":"exact"},{"name":"regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"regulation of NADP-specific malic enzyme","type":"related"},{"name":"regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903218"}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: GO:0004057
data:
  {"annotated_genes":["SJAG_02705"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93047],"is_not":false,"summary":null,"term":"GO:0004057"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-terminal L-alpha-aminoacyl-[protein] + L-arginyl-tRNA(Arg) = H+ + N-terminal L-arginyl-L-amino acid-[protein] + tRNA(Arg).","definition_xrefs":["PMID:16492767","PMID:9858543","RHEA:10208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arginyl-tRNA--protein transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042172","EC:2.3.2.8","MetaCyc:ARGINYLTRANSFERASE-RXN"],"synonyms":[{"name":"arginine transferase activity","type":"broad"},{"name":"arginyl-tRNA protein transferase activity","type":"exact"},{"name":"arginyltransferase activity","type":"broad"}],"termid":"GO:0004057","terms_by_termid":{"GO:0004057":null}}


id: GO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filopodium assembly","termid":"GO:0051489"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of filopodium assembly","synonyms":[{"name":"activation of filopodium formation","type":"narrow"},{"name":"positive regulation of filopodia biosynthesis","type":"exact"},{"name":"positive regulation of filopodia formation","type":"exact"},{"name":"positive regulation of filopodium formation","type":"exact"},{"name":"stimulation of filopodium formation","type":"narrow"},{"name":"up regulation of filopodium formation","type":"exact"},{"name":"up-regulation of filopodium formation","type":"exact"},{"name":"upregulation of filopodium formation","type":"exact"}],"termid":"GO:0051491"}


id: RO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","termid":"RO:0002222"}


id: GO:0102944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + medicagenate = UDP(3-) + a medicagenate monoglucoside.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"medicagenate UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9035"],"termid":"GO:0102944"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: PBO:0063875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 1","termid":"PBO:0063875"}


id: PBO:0069824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1110, pseudogene","termid":"PBO:0069824"}


id: PBO:0028276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septum","termid":"PBO:0028276"}


id: PBO:0080314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 78 pseudogene","termid":"PBO:0080314"}


id: PBO:0052981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta like 1","termid":"PBO:0052981"}


id: GO:0098004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.","definition_xrefs":["VZ:3956","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus tail fiber assembly","termid":"GO:0098004"}


id: GO:1901716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"down regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down regulation of GABA catabolic process","type":"exact"},{"name":"down regulation of GABA catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down-regulation of GABA catabolic process","type":"exact"},{"name":"down-regulation of GABA catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"downregulation of GABA catabolic process","type":"exact"},{"name":"downregulation of GABA catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolism","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolism","type":"exact"},{"name":"inhibition of GABA catabolic process","type":"exact"},{"name":"inhibition of GABA catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"inhibition of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid degradation","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"negative regulation of GABA catabolic process","type":"exact"},{"name":"negative regulation of GABA catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901716"}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: PBO:0047842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase","termid":"PBO:0047842"}


id: PBO:0060467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1","termid":"PBO:0060467"}


id: GO:0035662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 4 protein, a pattern recognition receptor that binds bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18304834","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor 4 binding","synonyms":[{"name":"TLR4 binding","type":"exact"}],"termid":"GO:0035662"}


id: PBO:0108575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex armadillo-type fold Ipi1","termid":"PBO:0108575"}


id: GO:0120317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of the sperm mitochondrial sheath, the tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum.","definition_xrefs":["PMID:32791035","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"sperm flagellum assembly","termid":"GO:0120316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrial sheath assembly","termid":"GO:0120317"}


id: PBO:0051685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inka box actin regulator 1","termid":"PBO:0051685"}


id: PBO:0076283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYF2 pre-mRNA splicing factor","termid":"PBO:0076283"}


id: PR:Q7LKZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM50A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM50 family protein C1020.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.12c","secondary_identifiers":["UniProtKB:Q7LKZ5"],"synonyms":[{"name":"Spom972h-FAM50A","type":"exact"}],"termid":"PR:Q7LKZ5"}


id: PBO:0051385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 2","termid":"PBO:0051385"}


id: PBO:0027425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ionizing_radiation","termid":"PBO:0027425"}


id: PBO:0067046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 66, pseudogene","termid":"PBO:0067046"}


id: GO:1901198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium ion transport into cytosol that is involved in cellular response to calcium ion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport into cytosol","termid":"GO:0010524"},{"relation_name":"part_of","term_name":"cellular response to calcium ion","termid":"GO:0071277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to calcium ion","synonyms":[{"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to Ca2+ ion","type":"exact"}],"termid":"GO:1901198"}


id: PBO:0062047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 34","termid":"PBO:0062047"}


id: PBO:0061203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC3 like DNA replication regulator","termid":"PBO:0061203"}


id: PATO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the mat1-Mc and mat1-Mi on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"h minus","synonyms":[{"name":"M","type":"exact"},{"name":"h -","type":"exact"}],"termid":"PATO:0001345"}


id: GO:0035450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to its lumenal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid thylakoid membrane","termid":"GO:0035449"},{"relation_name":"is_a","term_name":"extrinsic component of plastid inner membrane","termid":"GO:0035453"},{"relation_name":"part_of","term_name":"stromal side of plastid inner membrane","termid":"GO:0098570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of lumenal side of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to lumenal leaflet of plastid thylakoid membrane","type":"exact"},{"name":"extrinsic to lumenal side of plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to lumenal side of plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035450"}


id: GO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyadenosine + ATP = ADP + dAMP + 2 H+.","definition_xrefs":["EC:2.7.1.76","RHEA:23452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxynucleoside kinase activity","termid":"GO:0019136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"deoxyadenosine kinase activity","secondary_identifiers":["MetaCyc:DEOXYADENOSINE-KINASE-RXN","KEGG_REACTION:R02089"],"synonyms":[{"name":"ATP:deoxyadenosine 5'-phosphotransferase activity","type":"related"},{"name":"deoxyadenosine kinase (phosphorylating)","type":"related"},{"name":"purine-deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0004136"}


id: GO:1902006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23415322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of proline biosynthetic process","termid":"GO:1902005"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proline biosynthetic process","synonyms":[{"name":"down regulation of proline anabolism","type":"exact"},{"name":"down regulation of proline biosynthesis","type":"exact"},{"name":"down regulation of proline biosynthetic process","type":"exact"},{"name":"down regulation of proline formation","type":"exact"},{"name":"down regulation of proline synthesis","type":"exact"},{"name":"down-regulation of proline anabolism","type":"exact"},{"name":"down-regulation of proline biosynthesis","type":"exact"},{"name":"down-regulation of proline biosynthetic process","type":"exact"},{"name":"down-regulation of proline formation","type":"exact"},{"name":"down-regulation of proline synthesis","type":"exact"},{"name":"downregulation of proline anabolism","type":"exact"},{"name":"downregulation of proline biosynthesis","type":"exact"},{"name":"downregulation of proline biosynthetic process","type":"exact"},{"name":"downregulation of proline formation","type":"exact"},{"name":"downregulation of proline synthesis","type":"exact"},{"name":"inhibition of proline anabolism","type":"exact"},{"name":"inhibition of proline biosynthesis","type":"exact"},{"name":"inhibition of proline biosynthetic process","type":"narrow"},{"name":"inhibition of proline formation","type":"exact"},{"name":"inhibition of proline synthesis","type":"exact"},{"name":"negative regulation of proline anabolism","type":"exact"},{"name":"negative regulation of proline biosynthesis","type":"exact"},{"name":"negative regulation of proline formation","type":"exact"},{"name":"negative regulation of proline synthesis","type":"exact"}],"termid":"GO:1902006"}


id: GO:0010487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methioninamine + spermidine = S-methyl-5'-thioadenosine + thermospermine + H+.","definition_xrefs":["EC:2.5.1.79","PMID:17560575","MetaCyc:RXN-11190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"thermospermine synthase activity","secondary_identifiers":["RHEA:30515"],"termid":"GO:0010487"}


id: PBO:0055456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2888","termid":"PBO:0055456"}


id: PBO:0080454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 1","termid":"PBO:0080454"}


id: PBO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control (predicted)","termid":"PBO:0005330"}


id: GO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the swelling of soft tissues of the bitten organism as a result of excess water accumulation.","definition_xrefs":["PMID:20562011","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in induction of edema in another organism","synonyms":[{"name":"envenomation resulting in induction of edema in other organism","type":"exact"},{"name":"envenomation resulting in induction of oedema in other organism","type":"exact"}],"termid":"GO:0044398"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: GO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(R),10(R)-dihydrodiolphenanthrene is the principal intermediate metabolite.","definition_xrefs":["UM-BBD_pathwayID:pha3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene catabolic process","termid":"GO:0042216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene","synonyms":[{"name":"phenanthrene breakdown via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"},{"name":"phenanthrene degradation via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"}],"termid":"GO:0018956"}


id: GO:0010295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisate + H+ + NADPH + O2 = (+)-8'-hydroxyabscisate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.137","RHEA:12897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-abscisic acid 8'-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.93-RXN","KEGG_REACTION:R07202"],"synonyms":[{"name":"(+)-ABA 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-Hydroxylase activity, Abscisate 8'-hydroxylase activity","type":"related"},{"name":"ABA 8'-hydroxylase activity","type":"related"},{"name":"abscisate,NADPH:oxygen oxidoreductase (8'-hydroxylating)","type":"related"},{"name":"abscisic acid 8'-hydroxylase activity","type":"exact"}],"termid":"GO:0010295"}


id: GO:1902493
data:
  {"annotated_genes":["SJAG_02920","SJAG_02927","SJAG_04205","SJAG_03145","SJAG_03045","SJAG_06449","SJAG_03628","SJAG_02726","SJAG_04355","SJAG_00349","SJAG_03792","SJAG_03036","SJAG_00184","SJAG_03668","SJAG_03230","SJAG_04274","SJAG_02066","SJAG_02458","SJAG_02990","SJAG_00545","SJAG_04631","SJAG_00584","SJAG_00087","SJAG_03215","SJAG_01385","SJAG_02629","SJAG_04179","SJAG_01711","SJAG_00411","SJAG_02541","SJAG_00187","SJAG_04097","SJAG_03579","SJAG_04815","SJAG_00641","SJAG_04613","SJAG_01475","SJAG_01016","SJAG_02385","SJAG_04793","SJAG_00676","SJAG_01009","SJAG_01826","SJAG_00783","SJAG_03599","SJAG_03752","SJAG_02773","SJAG_04131","SJAG_05282","SJAG_03776","SJAG_02165","SJAG_01658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[84578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[95755,101369,86874,100505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[85528,114017,106487,112852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[111403,98643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[99664,101548,108855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[102573,90056,101370,103990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[97767,88474,90111,95045,93327,100782,102940,90405,97050,114591,111651,109216,100116,105133,108305,86813,95756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[107815,108616,109043,101829,103753,111442,94599,84641,113600,113648,99450,112347,84494,85413,87512,93919,103395,102964,110370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[69907,62464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of acetyltransferase activity.","definition_xrefs":["PMID:8077207","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01826":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03045":null,"SJAG_03145":null,"SJAG_03215":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04631":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902493","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0043189":null,"GO:0046695":null,"GO:1990467":null}}


id: GO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host induced systemic resistance","secondary_identifiers":["GO:0052298"],"synonyms":[{"name":"modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of induced systemic resistance in host","type":"exact"},{"name":"perturbation of host induced systemic resistance","type":"exact"}],"termid":"GO:0052159"}


id: GO:2001215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:2001215)","synonyms":[{"name":"regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"related"},{"name":"regulation of HMG-CoA reductase activity","type":"related"}],"termid":"GO:2001215"}


id: GO:0035035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an histone acetyltransferase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"histone acetyltransferase binding","synonyms":[{"name":"histone acetylase binding","type":"exact"}],"termid":"GO:0035035"}


id: GO:0043068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of programmed cell death","secondary_identifiers":["GO:0043071"],"synonyms":[{"name":"activation of programmed cell death","type":"narrow"},{"name":"positive regulation of non-apoptotic programmed cell death","type":"narrow"},{"name":"stimulation of programmed cell death","type":"narrow"},{"name":"up regulation of programmed cell death","type":"exact"},{"name":"up-regulation of programmed cell death","type":"exact"},{"name":"upregulation of programmed cell death","type":"exact"}],"termid":"GO:0043068"}


id: PBO:0018239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose alpha-glucosidase Agl1","termid":"PBO:0018239"}


id: PBO:0058596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6728","termid":"PBO:0058596"}


id: PBO:0077604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11F","termid":"PBO:0077604"}


id: FYPO:0005990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to the cell cortex of the cell tip during karyogamy involved in conjugation with cellular fusion, but does not remain there continuously.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy","synonyms":[{"name":"abnormal maintenance of protein localization in cell cortex of cell tip during karyogamy","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal maintenance of protein location in cell cortex of cell tip during nuclear fusion during mating","type":"exact"},{"name":"unstable protein localisation to cell cortex of cell tip during karyogamy","type":"exact"},{"name":"unstable protein localization to cell cortex of cell tip during karyogamy","type":"exact"}],"termid":"FYPO:0005990"}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_02392","SJAG_04332","SJAG_03602","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90642,91954,94530,112071],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: PBO:0082511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the DNA polymerase I alpha-primase complex; required for the initiation of DNA replication during mitotic DNA synthesis and premeiotic DNA synthesis","termid":"PBO:0082511"}


id: GO:0051952
data:
  {"annotated_genes":["SJAG_03591","SJAG_05346","SJAG_02605","SJAG_03970","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[94966,106611,89424,87841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[89425,94967,87842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051952","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa bonds in small molecule substrates. Highly selective action to release kallidin (lysyl-bradykinin) from kininogen involves hydrolysis of Met-Xaa or Leu-Xaa. The rat enzyme is unusual in liberating bradykinin directly from autologous kininogens by cleavage at two Arg-Xaa bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tissue kallikrein activity (obsolete GO:0004293)","synonyms":[{"name":"bradykininogenase","type":"broad"},{"name":"callicrein","type":"related"},{"name":"depot-padutin","type":"related"},{"name":"dilminal D","type":"related"},{"name":"glandular kallikrein activity","type":"related"},{"name":"glumorin","type":"related"},{"name":"kallidinogenase","type":"broad"},{"name":"kidney kallikrein","type":"related"},{"name":"kininogenase","type":"broad"},{"name":"kininogenin activity","type":"related"},{"name":"onokrein P","type":"related"},{"name":"padreatin","type":"related"},{"name":"padutin","type":"related"},{"name":"pancreatic kallikrein","type":"related"},{"name":"salivary kallikrein","type":"related"},{"name":"submandibular kallikrein","type":"related"},{"name":"submaxillary kallikrein","type":"related"},{"name":"tissue kallikrein activity","type":"exact"},{"name":"urinary kallikrein","type":"related"},{"name":"urokallikrein","type":"related"}],"termid":"GO:0004293"}


id: PATO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility which is relative high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mobile","termid":"PATO:0000299"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mobility","termid":"PATO:0002282"}


id: PBO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 24","termid":"PBO:0071418"}


id: GO:0004671
data:
  {"annotated_genes":["SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83996],"is_not":false,"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["EC:2.1.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-terminal carboxyl O-methyltransferase activity","termid":"GO:0003880"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0008276","GO:0003824","GO:0140096","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647977","MetaCyc:2.1.1.100-RXN","GO:0018225","KEGG_REACTION:R04496","RHEA:21672","Reactome:R-HSA-6788650"],"synonyms":[{"name":"S-adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase activity","type":"related"},{"name":"S-farnesylcysteine methyltransferase activity","type":"related"},{"name":"farnesyl cysteine C-terminal methyltransferase activity","type":"related"},{"name":"farnesyl-protein carboxymethyltransferase activity","type":"related"},{"name":"farnesylated protein C-terminal O-methyltransferase activity","type":"related"},{"name":"isoprenylated protein methyltransferase activity","type":"related"},{"name":"isoprenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylated protein carboxyl methyltransferase activity","type":"related"},{"name":"prenylated protein methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxyl methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylcysteine carboxymethyltransferase activity","type":"related"},{"name":"prenylcysteine methyltransferase activity","type":"related"},{"name":"protein C-terminal farnesylcysteine O-methyltransferase activity","type":"related"},{"name":"protein S-farnesylcysteine C-terminal methyltransferase activity","type":"related"},{"name":"protein-S-isoprenylcysteine O-methyltransferase activity","type":"exact"}],"termid":"GO:0004671","terms_by_termid":{"GO:0004671":null}}


id: PBO:0018284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator Fub2 (predicted)","termid":"PBO:0018284"}


id: GO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Tat complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by Tat complex (obsolete GO:0085025)","synonyms":[{"name":"modification by symbiont of host morphology or physiology via protein secreted by the Tat secretion system","type":"exact"}],"termid":"GO:0085025"}


id: GO:0035935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"androgen secretion","termid":"GO:0035935"}


id: PBO:0044845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130D (pseudogene)","termid":"PBO:0044845"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["PMID:24105262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: PR:P87130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim17-A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.16c","secondary_identifiers":["UniProtKB:P87130"],"synonyms":[{"name":"SPAC3A12.16c","type":"related"},{"name":"Spom972h-TIMM17A","type":"exact"},{"name":"mitochondrial protein import protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87130"}


id: GO:0098665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of serotonin receptor activity.","definition_xrefs":["GOC:bhm","PMID:16116092","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serotonin receptor complex","synonyms":[{"name":"5-HT receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor complex","type":"exact"},{"name":"5HT receptor complex","type":"exact"}],"termid":"GO:0098665"}


id: PBO:0072024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9","termid":"PBO:0072024"}


id: PATO:0000893
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000893 backcross fertility value (obsolete PATO:0000893)","termid":"PATO:0000893"}


id: PBO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal DNA (rDNA) transcription factor Rrn3","termid":"PBO:0001432"}


id: PATO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-malignant","synonyms":[{"name":"benign","type":"related"}],"termid":"PATO:0002096"}


id: GO:0046429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + H2O + 2 oxidized ferredoxin = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate + 2 reduced ferredoxin.","definition_xrefs":["EC:1.17.7.1","PMID:11752431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)","secondary_identifiers":["KEGG_REACTION:R08689","MetaCyc:RXN0-882","RHEA:26119"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-en-1-yl-diphosphate:oxidized ferredoxin oxidoreductase activity","type":"exact"},{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase activity","type":"broad"},{"name":"1-hydroxy-2-methyl-2-butenyl 4-diphosphate synthase activity","type":"broad"}],"termid":"GO:0046429"}


id: PBO:0085946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; not an essential gene; YLR413W has a paralog, FAT3, that arose from the whole genome duplication","termid":"PBO:0085946"}


id: GO:0102545
data:
  {"annotated_genes":["SJAG_03204","SJAG_02093","SJAG_02091","SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86250,87984,87993,96896,99063,110824,113034],"is_not":false,"summary":null,"term":"GO:0102545"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + a phosphatidylcholine = sn-glycero-3-phosphocholine + 2 H+ + 2 a carboxylate.","definition_xrefs":["GOC:pz","MetaCyc:RXN-14899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null,"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphatidyl phospholipase B activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0102545","terms_by_termid":{"GO:0102545":null}}


id: FYPO:0000534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body localization is abnormal. Spindle pole body localization is the process in which a whole spindle pole body is transported to, or maintained in, a specific location.","definition_xrefs":["GO:0070631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body localization","synonyms":[{"name":"abnormal mitotic SPB localization","type":"exact"},{"name":"abnormal mitotic spindle pole body localisation","type":"exact"},{"name":"abnormal position of mitotic spindle pole body","type":"related"},{"name":"abnormal spindle pole body localization during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body localization during vegetative growth","type":"exact"},{"name":"position of spindle pole body: abnormal","type":"related"}],"termid":"FYPO:0000534"}


id: GO:0052063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of nitric oxide as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host nitric oxide production (obsolete GO:0052063)","synonyms":[{"name":"activation by organism of defense-related host NO production","type":"exact"},{"name":"activation by organism of defense-related host nitric oxide production","type":"exact"},{"name":"activation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"induction by organism of defense-related host NO production","type":"exact"},{"name":"induction by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"related"},{"name":"positive regulation by organism of defense-related host NO production","type":"related"},{"name":"positive regulation by organism of defense-related nitric oxide production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"stimulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"up-regulation by symbiont of defense-related host nitric oxide production","type":"related"},{"name":"upregulation by symbiont of defense-related host nitric oxide production","type":"related"}],"termid":"GO:0052063"}


id: MOD:00232
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form N6-(phospho-5'-adenosine)-L-lysine.","definition_xrefs":["DeltaMass:316","PubMed:4944632","Unimod:405#K","PubMed:3882425","RESID:AA0227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-adenosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-adenosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-adenylic-N6-L-lysine","type":"exact"},{"name":"ACT_SITE N6-AMP-lysine intermediate","type":"exact"},{"name":"AMP Lysyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-lysine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(zeta)-5'-adenylic-L-lysine","type":"exact"},{"name":"N6-(phospho-5'-adenosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-adenosine phosphoramidester","type":"exact"},{"name":"N6AMPLys","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"epsilon-5'-adenylic-L-lysine","type":"exact"}],"termid":"MOD:00232"}


id: GO:1901799
data:
  {"annotated_genes":["SJAG_03048","SJAG_00475","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[103014,86529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:21669198","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00475":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"down-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"down-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"downregulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"downregulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"inhibition of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasome-mediated protein catabolic process","type":"exact"},{"name":"inhibition of proteasome-mediated protein catabolism","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"negative regulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901799","terms_by_termid":{"GO:0032435":null,"GO:1905785":null}}


id: GO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional gene silencing of host genes that are homologous to viral genes after viral infection.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host gene silencing in virus induced gene silencing (obsolete GO:0060146)","termid":"GO:0060146"}


id: PBO:0052989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 1","termid":"PBO:0052989"}


id: GO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + phosphate = D-fructose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sucrose phosphorylase activity","secondary_identifiers":["RHEA:24048","MetaCyc:SUCROSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"disaccharide glucosyltransferase activity","type":"broad"},{"name":"sucrose glucosyltransferase activity","type":"related"},{"name":"sucrose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0009018"}


id: PBO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 6","termid":"PBO:0060919"}


id: GO:0019218
data:
  {"annotated_genes":["SJAG_01307","SJAG_02104","SJAG_04018","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101899,84716,84715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid metabolism","type":"exact"}],"termid":"GO:0019218","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: GO:1905911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dauer entry.","definition_xrefs":["GO_REF:0000058","PMID:21531333","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of dauer entry","termid":"GO:1905909"},{"relation_name":"positively_regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer entry","synonyms":[{"name":"activation of dauer entry","type":"narrow"},{"name":"activation of nematode entry into dormancy","type":"narrow"},{"name":"positive regulation of nematode entry into dormancy","type":"exact"},{"name":"up regulation of dauer entry","type":"exact"},{"name":"up regulation of nematode entry into dormancy","type":"exact"},{"name":"up-regulation of dauer entry","type":"exact"},{"name":"up-regulation of nematode entry into dormancy","type":"exact"},{"name":"upregulation of dauer entry","type":"exact"},{"name":"upregulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905911"}


id: PBO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MRRF","termid":"PBO:0003478"}


id: PBO:0050578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 3A1","termid":"PBO:0050578"}


id: GO:0170023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific soluble sweet compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:24474785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0038023","GO:0005215"],"is_obsolete":false,"name":"ionotropic sweet taste receptor activity","termid":"GO:0170023"}


id: PBO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(6)(p23)","termid":"PBO:0047887"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: PBO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_thiamine","termid":"PBO:0030374"}


id: PBO:0074142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B2","termid":"PBO:0074142"}


id: PBO:0062795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 1","termid":"PBO:0062795"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: GO:0061487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which DNA-dependent DNA replication is started at a late origin of replication. A late origin of replication refers to an origin that is activated late in S phase.","definition_xrefs":["GOC:dph","PMID:19221029"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication initiation from late origin (obsolete GO:0061487)","synonyms":[{"name":"late replication origin firing","type":"exact"}],"termid":"GO:0061487"}


id: PBO:0087609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member with similarity to mammalian Rbbp7","termid":"PBO:0087609"}


id: PBO:0056657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 24","termid":"PBO:0056657"}


id: PBO:0034376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_contribute_to","termid":"PBO:0034376"}


id: PBO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 9","termid":"PBO:0071980"}


id: GO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stabilization of the structure of beta-galactosidase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-galactosidase stabilization activity (obsolete GO:0017030)","synonyms":[{"name":"beta-galactosidase stabilization activity","type":"exact"}],"termid":"GO:0017030"}


id: PBO:0082203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; type II membrane protein; member of the KRE2/MNT1 mannosyltransferase family; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0082203"}


id: PBO:0062804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 3","termid":"PBO:0062804"}


id: SO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a genomic feature, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_truncation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:feature_truncation","type":"exact"},{"name":"VEP:feature_truncation","type":"exact"},{"name":"feature truncation","type":"exact"}],"termid":"SO:0001906"}


id: PBO:0088399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L14","termid":"PBO:0088399"}


id: PBO:0000168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh1 (predicted)","termid":"PBO:0000168"}


id: PBO:0053206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 4","termid":"PBO:0053206"}


id: GO:0034675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha6 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha6-beta1 complex","synonyms":[{"name":"ITGA6-ITGB1 complex","type":"narrow"},{"name":"VLA-6 complex","type":"exact"},{"name":"alpha6-beta1 integrin complex","type":"exact"}],"termid":"GO:0034675"}


id: PBO:0062368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 3 pseudogene","termid":"PBO:0062368"}


id: PBO:0078283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 16-1","termid":"PBO:0078283"}


id: GO:1903221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences.","definition_xrefs":["PMID:23093942","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"prevention of genomic instability induced by DNA replication fork arrest","type":"related"},{"name":"regulation of mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork restart","type":"related"},{"name":"regulation of mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1903221"}


id: FYPO:0003279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more Golgi cisternae than normal. Golgi cisternae are the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.","definition_xrefs":["GO:0031985","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal Golgi morphology","termid":"FYPO:0000349"},{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"excess Golgi cisternae present","synonyms":[{"name":"Golgi cisternae present in greater amount","type":"exact"},{"name":"accumulation of Golgi cisternae","type":"exact"},{"name":"excess Golgi cisternae present during mitotic cell cycle","type":"related"},{"name":"excess Golgi cisternae present during vegetative growth","type":"exact"}],"termid":"FYPO:0003279"}


id: PBO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A9","termid":"PBO:0047006"}


id: PBO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog Lnp1","termid":"PBO:0014616"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: PBO:0069383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 643, pseudogene","termid":"PBO:0069383"}


id: PR:O13777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1610.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.01","synonyms":[{"name":"Spom972h-saf5","type":"exact"}],"termid":"PR:O13777"}


id: PBO:0012251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP complex subunit 4, Csc4","termid":"PBO:0012251"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","PMID:8423010","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: GO:0019568
data:
  {"annotated_genes":["SJAG_03958","SJAG_02010","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91122,91858,97258],"is_not":false,"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"arabinose metabolic process","termid":"GO:0019566"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose breakdown","type":"exact"},{"name":"arabinose catabolism","type":"exact"},{"name":"arabinose degradation","type":"exact"}],"termid":"GO:0019568","terms_by_termid":{"GO:0019568":null}}


id: PBO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotatin","termid":"PBO:0072676"}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: SO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of nucleotide sequence of a virus, a submicroscopic particle that replicates by infecting a host cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal_mobile_genetic_element","termid":"SO:0001038"},{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral_sequence","synonyms":[{"name":"viral sequence","type":"exact"},{"name":"virus sequence","type":"exact"}],"termid":"SO:0001041"}


id: PBO:0077139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TJAP1 pseudogene 1","termid":"PBO:0077139"}


id: PBO:0075819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 3","termid":"PBO:0075819"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: GO:0071923
data:
  {"annotated_genes":["SJAG_03591","SJAG_05978","SJAG_01825","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87840,102320,111397,102415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["PMID:17113138","GOC:lb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"},{"relation_name":"is_a","term_name":"regulation of cohesin loading","termid":"GO:0071922"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to chromatin","termid":"GO:0120186"},{"relation_name":"negatively_regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923","terms_by_termid":{"GO:1905412":null}}


id: GO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitter receptors.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor biosynthetic process (obsolete GO:0045212)","synonyms":[{"name":"neurotransmitter receptor anabolism","type":"exact"},{"name":"neurotransmitter receptor biosynthesis","type":"exact"},{"name":"neurotransmitter receptor formation","type":"exact"},{"name":"neurotransmitter receptor synthesis","type":"exact"}],"termid":"GO:0045212"}


id: PBO:0043949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta B1","termid":"PBO:0043949"}


id: PBO:0027135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere-nuclear_envelope_distance","termid":"PBO:0027135"}


id: GO:0048757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to form a membrane-bounded organelle into a pigment granule containing pigment. Maturation is a developmental process, independent of morphogenetic (shape) change, that is required for a cell or structure to attain its fully functional state.","definition_xrefs":["GOC:dgh","GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"cellular pigment accumulation","termid":"GO:0043482"},{"relation_name":"part_of","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule maturation","termid":"GO:0048757"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:24339919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: PBO:0017788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related CDK inhibitor Srw1","termid":"PBO:0017788"}


id: PR:O74428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tco89 gene.","definition_xrefs":["UniProtKB:O74428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.12","synonyms":[{"name":"Spom972h-tco89","type":"exact"}],"termid":"PR:O74428"}


id: PBO:0088200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc metalloendopeptidase; found in the cytoplasm and intermembrane space of mitochondria; with Cym1p, involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteins; protein abundance increases in response to DNA replication stress","termid":"PBO:0088200"}


id: PBO:0029034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiosis_I","termid":"PBO:0029034"}


id: PATO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having one nucleus.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleated","termid":"PATO:0002505"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mononucleate","termid":"PATO:0001407"}


id: GO:0120048
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91295],"is_not":false,"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in U6 snRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in U6 snRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:32266935","PMID:28525753","RHEA:52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"U6 snRNA (adenine-(43)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-18779","EC:2.1.1.346"],"termid":"GO:0120048","terms_by_termid":{"GO:0120048":null}}


id: PBO:0074044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 26","termid":"PBO:0074044"}


id: GO:0097680
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109966,112390],"is_not":false,"summary":null,"term":"GO:0097680"}]},"cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).","definition_xrefs":["GOC:rph","PMID:18584027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via classical nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-NHEJ","type":"related"},{"name":"canonical nonhomologous end joining","type":"exact"}],"termid":"GO:0097680","terms_by_termid":{"GO:0097680":null}}


id: PBO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 8","termid":"PBO:0047550"}


id: GO:0004240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal transit peptides from precursor proteins imported into the mitochondrion, typically with Arg in position P2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial processing peptidase activity (obsolete GO:0004240)","synonyms":[{"name":"MPP","type":"exact"},{"name":"alpha-mitochondrial processing peptidase","type":"narrow"},{"name":"beta-mitochondrial processing peptidase","type":"narrow"},{"name":"matrix peptidase","type":"related"},{"name":"matrix processing peptidase","type":"related"},{"name":"matrix processing proteinase","type":"related"},{"name":"mitochondrial processing peptidase activity","type":"exact"},{"name":"mitochondrial protein precursor-processing proteinase activity","type":"related"},{"name":"processing enhancing peptidase (for one of two subunits)","type":"related"},{"name":"processing enhancing peptidase activity","type":"narrow"}],"termid":"GO:0004240"}


id: PBO:0005566
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.11","termid":"PBO:0005566"}


id: FYPO:0000602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1 phase of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic G1 phase progression","synonyms":[{"name":"abnormal G1 phase progression during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G1 phase progression during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle progression in G1","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: abnormal","type":"related"}],"termid":"FYPO:0000602"}


id: PBO:0059351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15 pseudogene 2","termid":"PBO:0059351"}


id: PBO:0052702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 3","termid":"PBO:0052702"}


id: GO:0097323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a B cell to another cell via adhesion molecules.","definition_xrefs":["GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"B cell adhesion","termid":"GO:0097323"}


id: GO:0062175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"brexanolone catabolic process","synonyms":[{"name":"allopregnanolone breakdown","type":"exact"},{"name":"allopregnanolone catabolic process","type":"exact"},{"name":"allopregnanolone catabolism","type":"exact"},{"name":"allopregnanolone degradation","type":"exact"},{"name":"allotetrahydroprogesterone breakdown","type":"exact"},{"name":"allotetrahydroprogesterone catabolic process","type":"exact"},{"name":"allotetrahydroprogesterone catabolism","type":"exact"},{"name":"allotetrahydroprogesterone degradation","type":"exact"},{"name":"brexanolone breakdown","type":"exact"},{"name":"brexanolone catabolism","type":"exact"},{"name":"brexanolone degradation","type":"exact"}],"termid":"GO:0062175"}


id: PR:O14185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- stg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.10c","synonyms":[{"name":"Spom972h-stg1","type":"exact"},{"name":"calponin homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14185"}


id: GO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.","definition_xrefs":["ISBN:0395448956","PMID:20160973","GOC:jl","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavior","secondary_identifiers":["GO:0044708","GO:0044709","GO:0023032","Wikipedia:Behavior"],"synonyms":[{"name":"behavioral response to stimulus","type":"exact"},{"name":"behaviour","type":"exact"},{"name":"behavioural response to stimulus","type":"exact"},{"name":"single-organism behavior","type":"related"}],"termid":"GO:0007610"}


id: PBO:0065330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 54","termid":"PBO:0065330"}


id: GO:0070366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte differentiation","synonyms":[{"name":"regulation of liver cell differentiation","type":"exact"}],"termid":"GO:0070366"}


id: PBO:0005345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sed5 Vesicle Protein Svp26 (predicted)","termid":"PBO:0005345"}


id: PBO:0046652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase activator","termid":"PBO:0046652"}


id: PBO:0067195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 259, pseudogene","termid":"PBO:0067195"}


id: FYPO:0005278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more glucose-repressed mRNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Glucose-repressed mRNAs are transcribed from genes whose transcription is negatively regulated when glucose is present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of glucose-repressed gene mRNA during vegetative growth","synonyms":[{"name":"decreased glucose-repressed gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of glucose-repressed gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of glucose-repressed gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of glucose-repressed gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of glucose-repressed gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005278"}


id: PBO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 8","termid":"PBO:0050938"}


id: PBO:0068915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 158, pseudogene","termid":"PBO:0068915"}


id: PBO:0067399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 505, pseudogene","termid":"PBO:0067399"}


id: PBO:0066683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 1","termid":"PBO:0066683"}


id: PBO:0080474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitronectin","termid":"PBO:0080474"}


id: PBO:0029101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sulfate_import","termid":"PBO:0029101"}


id: GO:0106328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46884"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-seryl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (obsolete GO:0106328)","termid":"GO:0106328"}


id: GO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a component or product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"complement binding","termid":"GO:0001848"}


id: GO:1901981
data:
  {"annotated_genes":["SJAG_02177","SJAG_01769","SJAG_00216","SJAG_04960","SJAG_02166","SJAG_00173","SJAG_01748","SJAG_04963","SJAG_00724","SJAG_02587","SJAG_00368","SJAG_02468","SJAG_00115","SJAG_02392","SJAG_01516","SJAG_04077","SJAG_04024","SJAG_02657","SJAG_01135","SJAG_01143","SJAG_01783","SJAG_00152","SJAG_02248","SJAG_04010","SJAG_01382","SJAG_04219","SJAG_00971","SJAG_05179","SJAG_00638","SJAG_02572","SJAG_01945","SJAG_00314","SJAG_01519","SJAG_03250","SJAG_04644","SJAG_00118","SJAG_00117","SJAG_03851","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91964],"is_not":false,"summary":null,"term":"GO:1901981"},{"annotations":[113507,84215,98510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[94703,93708,95412,96367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[95918,106064,108528,93709,95917,105865,95785,86704,104726,96368,111290,92039,94704,100898,105718,97795,87608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[95376,95413,102089,110950,113094,85746,114530,97852,98003,114998,97842,102665,84147,86872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[108568,94809,96201,90611,95377,98511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol phosphate.","definition_xrefs":["PMID:23445487","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00724":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02177":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02657":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901981","terms_by_termid":{"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: SO:0001732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_methylation_site","synonyms":[{"name":"H3K27 methylation site","type":"exact"}],"termid":"SO:0001732"}


id: GO:1905465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"G-quadruplex DNA unwinding","termid":"GO:0044806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of G-quadruplex DNA unwinding","termid":"GO:1905465"}


id: GO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity required for the process of mRNA cleavage.","definition_xrefs":["GOC:mah","PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage factor activity (obsolete GO:0030363)","synonyms":[{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0030363"}


id: GO:0047082
data:
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id: GO:0014007
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microglia differentiation","termid":"GO:0014006"},{"relation_name":"is_a","term_name":"negative regulation of macrophage differentiation","termid":"GO:0045650"},{"relation_name":"is_a","term_name":"negative regulation of glial cell differentiation","termid":"GO:0045686"},{"relation_name":"negatively_regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglia differentiation","synonyms":[{"name":"down regulation of microglia differentiation","type":"exact"},{"name":"down-regulation of microglia differentiation","type":"exact"},{"name":"downregulation of microglia differentiation","type":"exact"},{"name":"inhibition of microglia differentiation","type":"narrow"},{"name":"negative regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014007"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: PBO:0088617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-C2H2 type zinc finger subunit Pir2","termid":"PBO:0088617"}


id: GO:0097285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a specific cell type.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-type specific apoptotic process (obsolete GO:0097285)","synonyms":[{"name":"cell-type specific apoptosis","type":"narrow"}],"termid":"GO:0097285"}


id: PBO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping enzyme, scavenger","termid":"PBO:0044641"}


id: GO:0006810
data:
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