# terms

id: PBO:0081407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 254","termid":"PBO:0081407"}


id: GO:0015462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein(out) = ADP + phosphate + protein(in).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type protein transporter activity","secondary_identifiers":["EC:7.4.2.5"],"synonyms":[{"name":"ABC-type protein transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled protein transmembrane transporter activity","type":"related"},{"name":"pilin/fimbrilin exporter activity","type":"narrow"},{"name":"protein ABC transporter","type":"exact"},{"name":"protein-transmembrane transporting ATPase activity","type":"related"},{"name":"protein-transporting ATPase activity","type":"broad"}],"termid":"GO:0015462"}


id: PBO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.6","termid":"PBO:0003413"}


id: PBO:0067179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 237, pseudogene","termid":"PBO:0067179"}


id: PBO:0039760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1","termid":"PBO:0039760"}


id: PBO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin K","termid":"PBO:0042212"}


id: PBO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 2","termid":"PBO:0043209"}


id: CHEBI:63247
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reducing agent","termid":"CHEBI:63247"}


id: GO:0021994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural folds are fused extending from the initial closure points.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"progression of neural tube closure","termid":"GO:0021994"}


id: GO:0009211
data:
  {"annotated_genes":["SJAG_04487","SJAG_00885","SJAG_04657","SJAG_04665","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114054,88540,85512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[95076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[103331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009211","terms_by_termid":{"GO:0006235":null,"GO:0009212":null,"GO:0046081":null}}


id: PBO:0087800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate; FRT2 has a paralog, FRT1, that arose from the whole genome duplication","termid":"PBO:0087800"}


id: PBO:0087536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins to influence multiple processes such as cell cycle progression, heat-shock resistance, mating, sporulation, telomeric silencing and early stages of mitophagy; orthologous to human NAA15; expression of both human NAA10 and NAA15 functionally complements ard1 nat1 double mutant although single mutations are not complemented by their orthologs","termid":"PBO:0087536"}


id: PBO:0055796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a)","termid":"PBO:0055796"}


id: PBO:0074154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E2B","termid":"PBO:0074154"}


id: FYPO:0007117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to leucine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during leucine starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to leucine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007117"}


id: PBO:0057543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 659","termid":"PBO:0057543"}


id: GO:0035065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone acetylation (obsolete GO:0035065)","termid":"GO:0035065"}


id: PBO:0040145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1B histone chaperone","termid":"PBO:0040145"}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: GO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex.","definition_xrefs":["PMID:15771591","ISBN:0781735149","PMID:15531770","GOC:add","PMID:16153240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"peptide or polysaccharide antigen processing and presentation of via MHC class II","type":"exact"}],"termid":"GO:0002504"}


id: PBO:0074289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 4","termid":"PBO:0074289"}


id: GO:1990627
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100965],"is_not":false,"summary":null,"term":"GO:1990627"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial inner membranes to form a single membrane.","definition_xrefs":["PMID:17055438","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0061024"],"is_obsolete":false,"name":"mitochondrial inner membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion inner membrane fusion","type":"exact"}],"termid":"GO:1990627","terms_by_termid":{"GO:1990627":null}}


id: FYPO:0004601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to hydroxyurea. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001929"},{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to hydroxyurea","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to HU","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004601"}


id: PBO:0074279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 1","termid":"PBO:0074279"}


id: PBO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5 (predicted)","termid":"PBO:0002282"}


id: GO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eclosion","synonyms":[{"name":"down regulation of eclosion","type":"exact"},{"name":"down-regulation of eclosion","type":"exact"},{"name":"downregulation of eclosion","type":"exact"},{"name":"inhibition of eclosion","type":"narrow"}],"termid":"GO:0045804"}


id: SO:1000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: GO:0000103
data:
  {"annotated_genes":["SJAG_03475","SJAG_01786","SJAG_01192","SJAG_04060","SJAG_05027","SJAG_00084","SJAG_04953","SJAG_01693","SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83923,86148,93898,103583,111492,111599,113521],"is_not":false,"summary":null,"term":"GO:0000103"},{"annotations":[103584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010134"},{"annotations":[84916,96081,103585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019379"}]},"cv_name":"biological_process","definition":"The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00084":null,"SJAG_01192":null,"SJAG_01693":null,"SJAG_01702":null,"SJAG_01786":null,"SJAG_03475":null,"SJAG_04060":null,"SJAG_04953":null,"SJAG_05027":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfate assimilation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019378"],"synonyms":[{"name":"sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"sulphate assimilation","type":"exact"},{"name":"sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:0000103","terms_by_termid":{"GO:0000103":null,"GO:0010134":null,"GO:0019379":null}}


id: PBO:0058225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4515","termid":"PBO:0058225"}


id: GO:0097701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress where the fluid is flowing across a solid surface with periodic variations. For example, the endothelium in straight parts of the artery tree is subjected to pulsatile shear stress with a significant forward direction, which is believed to be an important physiological stimulus enhancing vessel compliance and conferring anti-thrombotic, anti-adhesive, and anti-inflammatory effects.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:21768538","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fluid shear stress","termid":"GO:0034405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pulsatile fluid shear stress","termid":"GO:0097701"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: PBO:0077961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 14-2","termid":"PBO:0077961"}


id: FYPO:0001577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a tetrapeptide such as Leu-Ser-Lys-Leu as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002060","FYPO:0000003","FYPO:0002058","FYPO:0001985","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on tetrapeptide nitrogen source","synonyms":[{"name":"abolished growth on tetrapeptide nitrogen source","type":"broad"},{"name":"abolished tetrapeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on tetrapeptide nitrogen source","type":"exact"},{"name":"cell population growth on tetrapeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001577"}


id: PATO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A increased size quality inhering in an organ or tissue by virtue of the bearer's exhibiting increased number of cells.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Hyperplastic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperplastic","secondary_identifiers":["PATO:0000943"],"synonyms":[{"name":"hyperplasia","type":"exact"},{"name":"overdeveloped","type":"related"}],"termid":"PATO:0000644"}


id: PBO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1 pseudogene 2","termid":"PBO:0051032"}


id: PBO:0030099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ornithine_level","termid":"PBO:0030099"}


id: PBO:0085238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; also activates the phosphotyrosyl phosphatase activity of protein phosphatase 2A (PP2A); regulates G1 phase progression, the osmoresponse, microtubule dynamics; subunit of the Tap42p-Pph21p-Rrd2p complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0085238"}


id: GO:0018279
data:
  {"annotated_genes":["SJAG_04571","SJAG_01069","SJAG_00394","SJAG_03333","SJAG_03656","SJAG_01006","SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91428,97430,98649,105364,107153,109838,112906],"is_not":false,"summary":null,"term":"GO:0018279"}]},"cv_name":"biological_process","definition":"The glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine and N4 glucosyl asparagine also occur. This modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification.","definition_xrefs":["GOC:jsg","RESID:AA0151","RESID:AA0421","RESID:AA0420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation","termid":"GO:0006487"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00394":null,"SJAG_01006":null,"SJAG_01069":null,"SJAG_03333":null,"SJAG_03656":null,"SJAG_04127":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein N-linked glycosylation via asparagine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid N-linked glycosylation via asparagine","type":"exact"}],"termid":"GO:0018279","terms_by_termid":{"GO:0018279":null}}


id: MOD:00027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-tryptophan.","definition_xrefs":["RESID:AA0018","DeltaMass:0","PubMed:2059637","PubMed:6692818","ChEBI:29954","PubMed:9324768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tryptophan residue","synonyms":[{"name":"(2S)-2-amino-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"L-tryptophan","type":"exact"},{"name":"Trp","type":"exact"},{"name":"alpha-amino-beta-(3-indolyl)propionoic acid","type":"exact"},{"name":"beta(3-indolyl)alanine","type":"exact"}],"termid":"MOD:00027"}


id: GO:0032286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature central nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"central nervous system myelin maintenance","synonyms":[{"name":"central nervous system myelin sheath maintenance","type":"exact"},{"name":"myelin maintenance in central nervous system","type":"exact"}],"termid":"GO:0032286"}


id: FYPO:0006196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal and have abnormal orientation. The normal orientation is parallel to the long axis of the cell.","definition_xrefs":["PMID:11432827","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"misoriented interphase microtubules","termid":"FYPO:0003328"},{"relation_name":"has_part","term_name":"short interphase microtubules","termid":"FYPO:0006103"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"short misoriented interphase microtubules","synonyms":[{"name":"short misoriented cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short misoriented interphase cytoplasmic microtubules","type":"exact"},{"name":"short misoriented interphase microtubules during mitotic cell cycle","type":"related"},{"name":"short misoriented interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006196"}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: PATO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000590 relative thickness value (obsolete PATO:0000590)","termid":"PATO:0000590"}


id: FYPO:0004477
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to calcium ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to calcium ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased RNA level during cellular response to calcium","type":"exact"},{"name":"decreased RNA level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to calcium ion","type":"exact"},{"name":"reduced RNA level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004477"}


id: GO:0097699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF_miRNA","GOC:BHF","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to fluid shear stress","type":"exact"}],"termid":"GO:0097699"}


id: PBO:0066826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 125","termid":"PBO:0066826"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: FYPO:0002248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mannose binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased mannose binding","termid":"FYPO:0002248"}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: GO:0075205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The cAMP-mediated signal transduction is defined as a series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075205)","synonyms":[{"name":"modulation by host of symbiont cAMP-mediated signaling","type":"related"},{"name":"modulation by host of symbiont cAMP-mediated signalling","type":"exact"},{"name":"regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075205"}


id: GO:0098814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The low level of synaptic transmission that occurs via spontaneous neurotransmitter release into the synaptic cleft in the absence of a presynaptic action potential.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"spontaneous synaptic transmission","synonyms":[{"name":"basal synaptic transmission","type":"exact"}],"termid":"GO:0098814"}


id: PBO:0059942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 28","termid":"PBO:0059942"}


id: PBO:0041944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 5","termid":"PBO:0041944"}


id: PBO:0057122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR205 host gene","termid":"PBO:0057122"}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: PBO:0060991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHERF family PDZ scaffold protein 2","termid":"PBO:0060991"}


id: GO:0039009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the rectal diverticulum over time, from its formation to the mature structure. The rectal diverticulum is an outgrowth of the cloaca and links the pronephric kidney to the exterior.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:18226983","XAO:0001015","PMID:10535314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rectal diverticulum development","synonyms":[{"name":"pronephric rectal diverticulum development","type":"exact"}],"termid":"GO:0039009"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: PBO:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substrate_is","termid":"PBO:0000015"}


id: SO:1000186
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000186 sequence_variant_causing_cryptic_splice_donor_activation (obsolete SO:1000186)","synonyms":[{"name":"sequence variant causing cryptic splice donor activation","type":"exact"}],"termid":"SO:1000186"}


id: PR:O13926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0665 family protein C23C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.06c","synonyms":[{"name":"Spom972h-SPAC23C4.06c","type":"exact"}],"termid":"PR:O13926"}


id: GO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"negatively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen metabolic process","termid":"GO:0010713"}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: FYECO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the duration or frequency of one or more steps in a protocol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth timing","termid":"FYECO:0000122"}


id: PBO:0088342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A scaffold subunit Paa1","termid":"PBO:0088342"}


id: GO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"protein-hormone receptor activity","termid":"GO:0016500"}


id: PBO:0057677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268a","termid":"PBO:0057677"}


id: GO:0050221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha,15-trihydroxyprosta-5,13-dienoate + NADP+ = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate + NADPH.","definition_xrefs":["MetaCyc:PROSTAGLANDIN-E2-9-REDUCTASE-RXN","EC:1.1.1.189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"prostaglandin E2 9-reductase activity","secondary_identifiers":["Reactome:R-HSA-2161651","RHEA:24508"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha,15-trihydroxyprosta-5,13-dienoate:NADP+ 9-oxidoreductase activity","type":"related"},{"name":"9-keto-prostaglandin E(2) reductase activity","type":"related"},{"name":"9-keto-prostaglandin E2 reductase activity","type":"related"},{"name":"9-ketoprostaglandin reductase activity","type":"related"},{"name":"PGE(2) 9-ketoreductase activity","type":"related"},{"name":"PGE(2) 9-oxoreductase activity","type":"related"},{"name":"PGE-9-ketoreductase activity","type":"related"},{"name":"PGE2 9-ketoreductase activity","type":"related"},{"name":"PGE2 9-oxoreductase activity","type":"related"},{"name":"PGE2-9-OR","type":"related"},{"name":"PGE2-9-ketoreductase activity","type":"related"},{"name":"prostaglandin E 9-ketoreductase activity","type":"related"},{"name":"prostaglandin E2-9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E(2) 9-oxoreductase activity","type":"related"},{"name":"prostaglandin-E2 9-oxoreductase activity","type":"related"},{"name":"reductase, 15-hydroxy-9-oxoprostaglandin","type":"related"}],"termid":"GO:0050221"}


id: GO:0030129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin coat found on a synaptic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin vesicle coat","termid":"GO:0030125"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0031410"],"is_obsolete":false,"name":"clathrin coat of synaptic vesicle","termid":"GO:0030129"}


id: PBO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0001375"}


id: FYPO:0007985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly occurs earlier than normal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"early eMTOC assembly","termid":"FYPO:0007985"}


id: PBO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.20.4.1","termid":"PBO:0005615"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: PBO:0053801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1056","termid":"PBO:0053801"}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: PBO:0088173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylitol dehydrogenase; involved in utilization of xylose as a carbon source; not present in S288C, but located in a 65kb insertion on the right arm of chromosome XV in many wine strains such as EC1118 and AWRI1631","termid":"PBO:0088173"}


id: GO:0016158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = D-myo-inositol 1,2,4,5,6-pentakisphosphate + phosphate.","definition_xrefs":["EC:3.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"3-phytase activity","secondary_identifiers":["MetaCyc:RXN0-1001","RHEA:16989"],"synonyms":[{"name":"1-phytase activity","type":"related"},{"name":"myo-inositol-hexakisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"myo-inositol-hexaphosphate 3-phosphohydrolase activity","type":"exact"},{"name":"phytase activity","type":"broad"},{"name":"phytate 1-phosphatase activity","type":"related"},{"name":"phytate 3-phosphatase activity","type":"exact"}],"termid":"GO:0016158"}


id: GO:0006084
data:
  {"annotated_genes":["SJAG_02380","SJAG_01989","SJAG_04499","SJAG_04865","SJAG_02158","SJAG_00866","SJAG_03349","SJAG_02741","SJAG_01402","SJAG_01474","SJAG_03715","SJAG_00947","SJAG_02769","SJAG_01139","SJAG_02006","SJAG_03731","SJAG_00982","SJAG_03064","SJAG_03290","SJAG_03163","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87543,94140,110411,111819],"is_not":false,"summary":null,"term":"GO:0006084"},{"annotations":[94477,89349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[91107,110305,104662,83578,114487,95117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[90548,92693,84848,110968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[108136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[107436,111537],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_04499":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"acetyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetyl coenzyme A metabolic process","type":"exact"},{"name":"acetyl coenzyme A metabolism","type":"exact"},{"name":"acetyl-CoA metabolism","type":"exact"}],"termid":"GO:0006084","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0019287":null,"GO:0019427":null,"GO:0033512":null,"GO:1990181":null,"GO:2001211":null}}


id: GO:0003239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the conus arteriosus is generated and organized. The conus arteriosus is a valved chamber with thick muscular walls stemming from the ventricle and connecting to the pulmonary trunk.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"conus arteriosus development","termid":"GO:0003238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conus arteriosus morphogenesis","termid":"GO:0003239"}


id: FYPO:0006296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription by glucose (glucose repression) occurs to a greater extent than normal. Specific genes that are normally not transcribed in the presence of glucose are not derepressed in the mutant under conditions that derepress transcription in wild type cells.","definition_xrefs":["PomBase:mah","GO:0045014","PMID:20139237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription by glucose","termid":"FYPO:0000044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased negative regulation of transcription by glucose","synonyms":[{"name":"glucose repression defects","type":"related"},{"name":"increased glucose repression","type":"exact"},{"name":"increased glucose repression during vegetative growth","type":"exact"},{"name":"increased negative regulation of transcription by glucose during mitotic cell cycle","type":"related"},{"name":"increased negative regulation of transcription by glucose during vegetative growth","type":"exact"},{"name":"increased transcription of glucose starvation gene during vegetative growth","type":"related"}],"termid":"FYPO:0006296"}


id: PBO:0074662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50B","termid":"PBO:0074662"}


id: PBO:0080249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 12, pseudogene","termid":"PBO:0080249"}


id: PBO:0083007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother","termid":"PBO:0083007"}


id: PBO:0064557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannose kinase","termid":"PBO:0064557"}


id: GO:2000041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in axis elongation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0141113"},{"relation_name":"is_a","term_name":"regulation of planar cell polarity pathway involved in axis elongation","termid":"GO:2000040"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in axis elongation","termid":"GO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in axis elongation","termid":"GO:2000041"}


id: FYPO:0003176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome segregation is normal (i.e. indistinguishable from wild type). Meiotic chromosome segregation is the entire process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}


id: PR:Q9P7I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nts1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.19c","synonyms":[{"name":"Spom972h-nts1","type":"exact"}],"termid":"PR:Q9P7I7"}


id: GO:1990410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular adrenomedullin combining with a dimeric adrenomedullin receptor on the surface of the target cell.","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adrenomedullin receptor signaling pathway","synonyms":[{"name":"AM receptor signaling pathway","type":"exact"}],"termid":"GO:1990410"}


id: PBO:0088035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein; functions as ubiquitin-Atg8p adaptor in ubiquitin-dependent autophagy; serves as proteaphagy receptor for inactivated 26S proteasomes; contains CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE5 has a paralog, DON1, that arose from the whole genome duplication; human TOLLIP is a functional CUE-domain homolog, can complement yeast null mutant, rescuing hypersensitivity of cue5 null mutant cells to Htt-96Q","termid":"PBO:0088035"}


id: PBO:0054952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2366","termid":"PBO:0054952"}


id: PBO:0055782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 2","termid":"PBO:0055782"}


id: PBO:0039746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein M","termid":"PBO:0039746"}


id: CHEBI:338412
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomycin","termid":"CHEBI:338412"}


id: PBO:0070145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 59 pseudogene","termid":"PBO:0070145"}


id: PomGeneEx:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at levels, or produced at rates, that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluctuates","synonyms":[{"name":"gene expression fluctuates","type":"exact"},{"name":"gene product level fluctuates","type":"exact"}],"termid":"PomGeneEx:0000008"}


id: PBO:0073709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Skint1 like (pseudogene)","termid":"PBO:0073709"}


id: GO:1902282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a ventricular cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:8528244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1902282"}


id: PBO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 1","termid":"PBO:0061304"}


id: GO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sterol(in) = ADP + phosphate + sterol(out).","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled lipid transmembrane transporter activity","termid":"GO:0034040"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type sterol transporter activity","synonyms":[{"name":"ATP-coupled sterol transmembrane transporter activity","type":"related"},{"name":"ATP-dependent sterol transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled sterol transmembrane transporter activity","type":"related"},{"name":"sterol-transporting ATPase activity","type":"related"}],"termid":"GO:0034041"}


id: FYPO:0002433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell shape (obsolete FYPO:0002433)","synonyms":[{"name":"inviable, abnormally shaped vegetative cell population","type":"exact"},{"name":"lethal; vegetative cell population with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002433"}


id: PBO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 3","termid":"PBO:0042824"}


id: GO:0014706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells.","definition_xrefs":["GOC:dph","CL:0000737","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle tissue development","termid":"GO:0014706"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: GO:0043236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a laminin, a major glycoprotein constituent of the basement membrane of cells.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"laminin binding","secondary_identifiers":["GO:0043238","GO:0043239"],"synonyms":[{"name":"laminin-2 binding","type":"narrow"},{"name":"laminin-4 binding","type":"narrow"}],"termid":"GO:0043236"}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: GO:0036299
data:
  {"annotated_genes":["SJAG_00727"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85724],"is_not":false,"summary":null,"term":"GO:0036299"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA by a mechanism that does not involve homologous DNA recombination.","definition_xrefs":["PMID:11154259","PMID:22064477","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstrand cross-link repair","termid":"GO:0036297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00727":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"non-recombinational interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination-independent ICL repair","type":"exact"},{"name":"recombination-independent interstrand cross-link repair","type":"exact"}],"termid":"GO:0036299","terms_by_termid":{"GO:0036299":null}}


id: GO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amyloid-beta peptide/protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amyloid-beta binding","synonyms":[{"name":"beta-amyloid binding","type":"exact"}],"termid":"GO:0001540"}


id: PATO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/frequency"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frequency","termid":"PATO:0000044"}


id: PR:P87231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crossover junction endonuclease MUS81 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04324","PANTHER:PTHR13451:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease mus81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.05c","secondary_identifiers":["UniProtKB:P87231"],"synonyms":[{"name":"Spom972h-MUS81","type":"exact"}],"termid":"PR:P87231"}


id: PBO:0038521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 3","termid":"PBO:0038521"}


id: FYPO:0003510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing silver ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on silver ions","synonyms":[{"name":"normal cell population growth in presence of silver ions","type":"exact"},{"name":"normal cell population growth on silver ions","type":"exact"},{"name":"normal cellular response to silver ions","type":"related"},{"name":"normal growth on silver","type":"related"},{"name":"normal vegetative cell population growth on silver ions","type":"exact"}],"termid":"FYPO:0003510"}


id: GO:0060336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of response to type II interferon","termid":"GO:0060331"},{"relation_name":"is_a","term_name":"regulation of type II interferon-mediated signaling pathway","termid":"GO:0060334"},{"relation_name":"negatively_regulates","term_name":"type II interferon-mediated signaling pathway","termid":"GO:0060333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type II interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation of gamma-interferon-mediated signaling pathway","type":"related"},{"name":"negative regulation of immune interferon-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interferon-gamma-mediated signaling pathway","type":"broad"},{"name":"negative regulation of interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"negative regulation of type II IFN-mediated signaling pathway","type":"broad"}],"termid":"GO:0060336"}


id: GO:0106370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + S-adenosyl-L-methionine = N(pros)-methyl-L-histidyl-[protein] + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:67076","PMID:33563959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016741","GO:0008276","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-L-histidine N-pros-methyltransferase activity","termid":"GO:0106370"}


id: PBO:0043796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like","termid":"PBO:0043796"}


id: PBO:0029471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_acid_phosphatase_activity","termid":"PBO:0029471"}


id: GO:0038193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thromboxane A2 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:15893915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"thromboxane A2 signaling pathway","synonyms":[{"name":"TXA(2) receptor signaling","type":"exact"},{"name":"TXA2 signaling","type":"exact"}],"termid":"GO:0038193"}


id: PBO:0042477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH3 antisense RNA 1","termid":"PBO:0042477"}


id: PBO:0031358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_benomyl","termid":"PBO:0031358"}


id: GO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor recycling","termid":"GO:0001919"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"negatively_regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor recycling","synonyms":[{"name":"down regulation of receptor recycling","type":"exact"},{"name":"down-regulation of receptor recycling","type":"exact"},{"name":"downregulation of receptor recycling","type":"exact"},{"name":"inhibition of receptor recycling","type":"narrow"}],"termid":"GO:0001920"}


id: GO:0061143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a primary alveolar septum over time, from its formation to the mature structure. A primary alveolar septum is a specialized epithelium that surrounds the saccule as it forms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar primary septum development","termid":"GO:0061143"}


id: PBO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHSL1 antisense RNA 1","termid":"PBO:0061006"}


id: PBO:0084014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycogen synthase kinase 3 (GSK-3) homolog; one of four GSK-3 homologs in S. cerevisiae that function to activate Msn2p-dependent transcription of stress responsive genes and that function in protein degradation; MRK1 has a paralog, RIM11, that arose from the whole genome duplication","termid":"PBO:0084014"}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: GO:0015779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucuronosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Glucuronosides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of glucuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glucuronoside transport","synonyms":[{"name":"glucuronide transport","type":"exact"}],"termid":"GO:0015779"}


id: PBO:0083052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol kinase; localized to the endoplasmic reticulum (ER); overproduction induces enlargement of ER-like membrane structures and suppresses a temperature-sensitive sly1 mutation; contains a CTP transferase domain","termid":"PBO:0083052"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: PBO:0091281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HydroxyUrea Sensitive","termid":"PBO:0091281"}


id: PBO:0110200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, Hsp90 co-chaperone Wos2","termid":"PBO:0110200"}


id: FYPO:0000611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested in S phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic S phase","synonyms":[{"name":"abnormal cell cycle arrest in S phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in S phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with incompletely replicated DNA","type":"exact"},{"name":"mitotic cell cycle progression in S phase: arrested","type":"related"}],"termid":"FYPO:0000611"}


id: GO:0018314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent cross-linking of pyrroloquinoline-quinone to peptidyl-glutamic acid and peptidyl-tyrosine.","definition_xrefs":["RESID:AA0283","PMID:7665488"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-pyrroloquinoline-quinone linkage (obsolete GO:0018314)","synonyms":[{"name":"protein-pyrroloquinoline-quinone linkage","type":"exact"}],"termid":"GO:0018314"}


id: PBO:0076412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 6 like","termid":"PBO:0076412"}


id: PBO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 24","termid":"PBO:0071606"}


id: PBO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA papillary thyroid carcinoma tumor suppressor","termid":"PBO:0110039"}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:jl","GOC:pm","PMID:22022213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: FYPO:0006312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-3'-diphospho-5'-guanosine diphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"reduced DNA-3'-diphospho-5'-guanosine diphosphatase activity","type":"exact"}],"termid":"FYPO:0006312"}


id: GO:0033260
data:
  {"annotated_genes":["SJAG_00863","SJAG_05197","SJAG_03840","SJAG_02394","SJAG_01677","SJAG_00728","SJAG_00327","SJAG_02627","SJAG_02992","SJAG_04210","SJAG_00400","SJAG_01076","SJAG_02294","SJAG_02199","SJAG_01823","SJAG_03495","SJAG_02908","SJAG_02439","SJAG_00272","SJAG_00399","SJAG_02822","SJAG_03720","SJAG_00857","SJAG_03160","SJAG_02172","SJAG_01410","SJAG_00364","SJAG_00814","SJAG_01068","SJAG_04671","SJAG_04183","SJAG_01884","SJAG_00696","SJAG_02690","SJAG_03898","SJAG_00874","SJAG_02074","SJAG_00536","SJAG_04995","SJAG_00618","SJAG_03780","SJAG_01374","SJAG_04150","SJAG_03843","SJAG_02818","SJAG_04816","SJAG_04272","SJAG_04994","SJAG_02800","SJAG_01010","SJAG_00884","SJAG_01624","SJAG_01267","SJAG_05180","SJAG_03855","SJAG_02348","SJAG_06022","SJAG_05232","SJAG_02162","SJAG_02198","SJAG_00573","SJAG_02098","SJAG_05239","SJAG_03722","SJAG_04877","SJAG_04341","SJAG_02607","SJAG_03438","SJAG_04879","SJAG_01221","SJAG_02039","SJAG_03695","SJAG_01210","SJAG_02667","SJAG_01832","SJAG_05301","SJAG_01762","SJAG_01354","SJAG_02079","SJAG_03525","SJAG_00729","SJAG_03048","SJAG_00311","SJAG_03451","SJAG_00198","SJAG_03927","SJAG_04190","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111462,106014,109636,103414],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[108344,91338,103048,103416,111340,111464,98909,103313,109226,91160,106017,85704,108584,100992,109637,90066,111169,91371,100306,105181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[99405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[105647,94220,107969,103905,102485,108894,112320,95368,85717,100499,107615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[93531,104120,109639,90653,107970,111466,103417,102486,101392,108506,109248,103315,93428,111342,86566,95501,106631,108101,95508,89080,109227,90046,113381,99040,103907,107708,109554,111171,106292,88064,107450],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[91340,105183,100994,100310,114208,98911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[100995,91341,85705,100311,103049,91372,103418,90068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[107826,105198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[106632,86567,95509],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[106633,99407],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[92278,94347,103828,112864,85304,105155,92120,95151,95035,87067,103804,105628,108587,90928,91175],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[104961,112909],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[104962,93872,98454],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99041,93532],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[88748,96723,97580,88662,100235,96687,91162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[108104,113321,99408],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[102687,98459,85199,112301],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[98463],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[111344,91342,103316,106293,107617,111172,88065,103420,93533,100407,111343,102487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[95445],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[99033,108588,84459,100236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA 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DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication during S phase","type":"related"},{"name":"DNA replication involved in S phase","type":"exact"},{"name":"DNA replication involved in S-phase","type":"exact"},{"name":"nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:0033260","terms_by_termid":{"GO:0006279":null,"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902969":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904514":null,"GO:1990426":null,"GO:1990505":null}}


id: GO:0080153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the reductive pentose-phosphate cycle.","definition_xrefs":["PMID:20399532","PMID:17031544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of reductive pentose-phosphate cycle","termid":"GO:0080152"},{"relation_name":"is_a","term_name":"negative regulation of photosynthesis","termid":"GO:1905156"},{"relation_name":"negatively_regulates","term_name":"reductive pentose-phosphate cycle","termid":"GO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of reductive pentose-phosphate cycle","synonyms":[{"name":"negative regulation of C3 photosynthesis","type":"narrow"},{"name":"negative regulation of Calvin cycle","type":"narrow"}],"termid":"GO:0080153"}


id: GO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotinate + H2O + O2 = 2,6-dihydroxynicotinate + H2O2.","definition_xrefs":["RHEA:22808","EC:1.17.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"6-hydroxynicotinate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07221","MetaCyc:RXN-7585"],"synonyms":[{"name":"6-hydroxynicotinate hydroxylase activity","type":"related"},{"name":"6-hydroxynicotinate:O2 oxidoreductase activity","type":"related"},{"name":"6-hydroxynicotinic acid dehydrogenase activity","type":"related"},{"name":"6-hydroxynicotinic acid hydroxylase activity","type":"related"}],"termid":"GO:0043732"}


id: FYPO:0006669
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one cell mates with two partners, leading to the fusion of three cells. The resulting zygote can then undergo sporulation to form an ascus containing more than four spores.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mating between three cells","synonyms":[{"name":"abnormal conjugation between three cells","type":"exact"},{"name":"abnormal mating among three cells","type":"exact"}],"termid":"FYPO:0006669"}


id: PR:Q9P6R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.02","synonyms":[{"name":"Spom972h-cwf24","type":"exact"},{"name":"complexed with cdc5 protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R8"}


id: PBO:0045610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 21 (pseudogene)","termid":"PBO:0045610"}


id: GO:0140121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Lewy body.","definition_xrefs":["PMID:15158159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Lewy body formation","termid":"GO:0140121"}


id: PBO:0079476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twisted gastrulation BMP signaling modulator 1","termid":"PBO:0079476"}


id: PBO:0055951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 59","termid":"PBO:0055951"}


id: PR:P21536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.09","synonyms":[{"name":"A6L (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-ATPase subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp8","type":"exact"}],"termid":"PR:P21536"}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: FYPO:0002386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at centromere outer repeat","termid":"FYPO:0006818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"deceased protein localization to heterochromatin at centromere otr","type":"exact"},{"name":"decreased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"decreased protein localization to heterochromatin at pericentric region","type":"related"},{"name":"decreased protein localization to heterochromatin at pericentromeric region","type":"related"},{"name":"reduced protein localization to heterochromatin at centromere outer repeat","type":"exact"}],"termid":"FYPO:0002386"}


id: GO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of B cell deletion","termid":"GO:0002867"},{"relation_name":"is_a","term_name":"negative regulation of B cell apoptotic process","termid":"GO:0002903"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell deletion","synonyms":[{"name":"down regulation of B cell deletion","type":"exact"},{"name":"down-regulation of B cell deletion","type":"exact"},{"name":"downregulation of B cell deletion","type":"exact"},{"name":"inhibition of B cell deletion","type":"narrow"},{"name":"negative regulation of B lymphocyte deletion","type":"exact"},{"name":"negative regulation of B-cell deletion","type":"exact"},{"name":"negative regulation of B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002868"}


id: GO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of achromobactin, a citrate siderophore.","definition_xrefs":["PMID:10928541","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achromobactin metabolic process","termid":"GO:0042860"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"achromobactin catabolic process","synonyms":[{"name":"achromobactin breakdown","type":"exact"},{"name":"achromobactin catabolism","type":"exact"},{"name":"achromobactin degradation","type":"exact"}],"termid":"GO:0042862"}


id: PBO:0083532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SPT4/YGR063C","termid":"PBO:0083532"}


id: GO:0120306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of perturbations or damage to the actin cytoskeleton.","definition_xrefs":["GOC:vw","GOC:krc","PMID:32915139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actin cytoskeletal stress","references_by_uniquename":{"PMID:32915139":null},"secondary_identifiers":["GO:1903956","GO:1903957","GO:1904804","GO:1904805"],"synonyms":[{"name":"cellular response to actin cytoskeleton stress","type":"exact"},{"name":"cellular response to latrunculin A","type":"narrow"},{"name":"cellular response to latrunculin B","type":"narrow"},{"name":"response to latrunculin A","type":"narrow"},{"name":"response to latrunculin B","type":"narrow"}],"termid":"GO:0120306"}


id: PBO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 1","termid":"PBO:0070295"}


id: GO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a smoothened (smo) protein, which interacts with patched to transmit hedgehog signals.","definition_xrefs":["GOC:ceb","PMID:11731473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"smoothened binding","synonyms":[{"name":"smo binding","type":"exact"},{"name":"smo ligand","type":"narrow"},{"name":"smoothened ligand","type":"narrow"}],"termid":"GO:0005119"}


id: PBO:0043830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 2","termid":"PBO:0043830"}


id: GO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of blood vessels, especially arteries, due to constriction of smooth muscle cells that line the vessels, and usually causing an increase in blood pressure.","definition_xrefs":["GOC:pr","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction","secondary_identifiers":["GO:0045908","Wikipedia:Vasoconstriction"],"synonyms":[{"name":"negative regulation of blood vessel size","type":"exact"}],"termid":"GO:0042310"}


id: GO:0033005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"positively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation","termid":"GO:0033005"}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: PBO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BOI2","termid":"PBO:0016098"}


id: GO:0008376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-8855954","Reactome:R-HSA-8931648","Reactome:R-HSA-9605700"],"synonyms":[{"name":"GalNAc transferase activity","type":"exact"}],"termid":"GO:0008376"}


id: GO:0044459
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part (obsolete GO:0044459)","termid":"GO:0044459"}


id: GO:0099100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A cation channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated monoatomic ion channel activity","termid":"GO:0099099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated monoatomic cation channel activity","synonyms":[{"name":"G-protein gated cation channel activity","type":"broad"}],"termid":"GO:0099100"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["PMID:15684033","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: PATO:0000546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's lacking photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoinsensitive","synonyms":[{"name":"photoresistant","type":"related"}],"termid":"PATO:0000546"}


id: PBO:0086958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of phospholipase D (Spo14p); interacts with Spo14p and regulates its catalytic activity; capable of buffering the toxicity of C16:0 platelet activating factor, a lipid that accumulates intraneuronally in Alzheimer's patients","termid":"PBO:0086958"}


id: PR:P0CH07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi2 gene.","definition_xrefs":["PRO:DAN","UniProtKB:P0CH07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.12c","synonyms":[{"name":"SPAC1805.12c","type":"related"},{"name":"Spom972h-ubi2","type":"exact"},{"name":"uep1","type":"related"}],"termid":"PR:P0CH07"}


id: PBO:0039050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with FG repeats 2","termid":"PBO:0039050"}


id: SO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Incompatibility in the sequence due to some experimental problem.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_sequencing_information","secondary_identifiers":["BS:00125"],"synonyms":[{"name":"sequencing_information","type":"exact"}],"termid":"SO:0001082"}


id: GO:0052912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanine(748) in 23S rRNA = N(1)-methylguanine(748) in 23S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N1-)-methyltransferase activity","termid":"GO:0008989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (guanine(748)-N(1))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11599","KEGG_REACTION:R07233","RHEA:42904"],"synonyms":[{"name":"23S rRNA m(1)G(748) methyltransferase activity","type":"broad"}],"termid":"GO:0052912"}


id: MOD:01409
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three hydroxyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated residue","synonyms":[{"name":"Hy3Res","type":"exact"}],"termid":"MOD:01409"}


id: PBO:0028374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mitomycin_C","termid":"PBO:0028374"}


id: FYPO:0004538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"microtubules present in increased numbers","synonyms":[{"name":"increased level of MTs","type":"exact"},{"name":"microtubules present in greater numbers","type":"exact"},{"name":"microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004538"}


id: PBO:0075744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 3","termid":"PBO:0075744"}


id: MOD:00978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piperidine adduct to C-terminal Cys","termid":"MOD:00978"}


id: GO:1990512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Nuclear transcriptional repressor complex that is capable of negatively regulating CLOCK-BMAL-dependent transactivation of genes in a delayed negative feedback manner which generates circadian rhythms.","definition_xrefs":["PMID:24855952","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Cry-Per complex","termid":"GO:1990512"}


id: PR:Q9UTN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A global transcription activator SNF2L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02123","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit snf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.01","secondary_identifiers":["UniProtKB:Q9UTN6"],"synonyms":[{"name":"ATP-dependent helicase snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RSC complex subunit snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMARCA2","type":"exact"}],"termid":"PR:Q9UTN6"}


id: PBO:0028997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_amino_acid_import_during_vegetative_growth","termid":"PBO:0028997"}


id: PBO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1-like protein Git7","termid":"PBO:0003366"}


id: PBO:0042384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD276 molecule","termid":"PBO:0042384"}


id: GO:0060481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lobar bronchus epithelium from an initial condition to its mature state. This process begins with the formation of the lobar bronchus epithelium and ends with the mature structure. The lobar bronchus epithelium is the tissue made up of epithelial cells that lines the inside of the lobar bronchus.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lobar bronchus development","termid":"GO:0060482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lobar bronchus epithelium development","termid":"GO:0060481"}


id: GO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Kdo2-lipid A + phosphatidylethanolamine = phosphoethanolamine-Kdo2-lipid A + diacylglycerol.","definition_xrefs":["PMID:15795227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase activity","synonyms":[{"name":"EptB","type":"related"},{"name":"phosphoethanolamine transferase","type":"broad"}],"termid":"GO:0043838"}


id: GO:0009254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continual breakdown and regeneration of peptidoglycan required to maintain the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan turnover","secondary_identifiers":["GO:0009287"],"synonyms":[{"name":"murein turnover","type":"exact"}],"termid":"GO:0009254"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: MOD:01364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#S","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site S","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01364"}


id: PBO:0063666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins phospholipase 3","termid":"PBO:0063666"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: GO:0060308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of GTP cyclohydrolase I. GTP cyclohydrolase I activity catalyzes the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"GTP cyclohydrolase I regulator activity","termid":"GO:0060308"}


id: GO:0015465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An agent that can lyse cells.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete lysin activity (obsolete GO:0015465)","synonyms":[{"name":"lysin activity","type":"exact"}],"termid":"GO:0015465"}


id: PBO:0073945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 3","termid":"PBO:0073945"}


id: GO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion","synonyms":[{"name":"natriuresis","type":"broad"}],"termid":"GO:0035815"}


id: PBO:0076159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 3","termid":"PBO:0076159"}


id: PBO:0069131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 381, pseudogene","termid":"PBO:0069131"}


id: PBO:0069023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 268, pseudogene","termid":"PBO:0069023"}


id: PBO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr5","termid":"PBO:0002601"}


id: PATO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000238 relative odor_acuity (obsolete PATO:0000238)","termid":"PATO:0000238"}


id: GO:0018736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA + H2O = 3-hydroxypimeloyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA hydrolase activity","termid":"GO:0018736"}


id: PBO:0055148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2567","termid":"PBO:0055148"}


id: FYPO:0007396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell occurs to a lower extent than normal.","definition_xrefs":["GO:0140420","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased heme import","synonyms":[{"name":"decreased haem import","type":"exact"},{"name":"decreased heme import during mitotic cell cycle","type":"related"},{"name":"decreased heme import during vegetative growth","type":"exact"},{"name":"decreased heme import into cell","type":"exact"},{"name":"reduced heme import","type":"exact"}],"termid":"FYPO:0007396"}


id: PR:Q09758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein-cysteine N-palmitoyltransferase HHAT-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-bound O-acyltransferase C24H6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.01c","secondary_identifiers":["UniProtKB:Q09758"],"synonyms":[{"name":"Spom972h-HHATL","type":"exact"}],"termid":"PR:Q09758"}


id: PBO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of lithium","termid":"PBO:0005541"}


id: PBO:0070288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 29","termid":"PBO:0070288"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: GO:0033786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-beta-D-heptose-1-phosphate + ATP = ADP-D-glycero-D-manno-heptose.","definition_xrefs":["MetaCyc:RXN0-4342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779"],"is_obsolete":false,"name":"heptose-1-phosphate adenylyltransferase activity","secondary_identifiers":["RHEA:27465"],"synonyms":[{"name":"D-beta-D-heptose 1-phosphate adenylyltransferase activity","type":"exact"},{"name":"heptose 1-phosphate adenyltransferase activity","type":"exact"}],"termid":"GO:0033786"}


id: GO:1905443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:15533940","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of clathrin coat assembly","synonyms":[{"name":"regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905443"}


id: GO:0019010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesoic acid + S-adenosyl-methionine = methyl farnesoate + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:12135499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"farnesoic acid O-methyltransferase activity","synonyms":[{"name":"S-adenosyl-methionine:farnesoic acid O-methyltransferase activity","type":"exact"}],"termid":"GO:0019010"}


id: GO:0034937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: perchlorate + 2 H+ + 2 e- = chlorate + H2O.","definition_xrefs":["UM-BBD_reactionID:r0980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"perchlorate reductase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034937"}


id: PBO:0086724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; contains a PH domain and binds phosphatidylinositols and phosphatidylethanolamine in a large-scale study; YNL144C has a paralog, YHR131C, that arose from the whole genome duplication","termid":"PBO:0086724"}


id: SO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of transcribed_cluster defined by a set of transcribed sequences from the a unique gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_cluster","termid":"SO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unigene_cluster","synonyms":[{"name":"unigene cluster","type":"related"}],"termid":"SO:0001458"}


id: PBO:0084727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein of unknown function; associates with mitochondrial ribosome; localizes to the inner membrane with the C terminus facing the intermembrane space; ortholog of human RMND1, mutation in which is implicated in infantile encephaloneuromyopathy and defective mitochondrial translation","termid":"PBO:0084727"}


id: GO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"esculetin metabolic process","termid":"GO:0033492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"esculetin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5349"],"synonyms":[{"name":"esculetin anabolism","type":"exact"},{"name":"esculetin biosynthesis","type":"exact"},{"name":"esculetin formation","type":"exact"},{"name":"esculetin synthesis","type":"exact"}],"termid":"GO:0033493"}


id: GO:1901514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + lipo-chitin oligosaccharide(in) = ADP + phosphate + lipo-chitin oligosaccharide(out).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"lipo-chitin oligosaccharide transmembrane transporter activity","termid":"GO:1901513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled lipo-chitin oligosaccharide transmembrane transporter activity","synonyms":[{"name":"lipo-chitin oligosaccharide transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901514"}


id: FYECO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with phenylalanine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, phenylalanine nitrogen source","termid":"FYECO:0000296"}


id: PBO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S21","termid":"PBO:0003896"}


id: PBO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.1","termid":"PBO:0000131"}


id: PBO:0046811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F11 receptor","termid":"PBO:0046811"}


id: GO:0045185
data:
  {"annotated_genes":["SJAG_01993","SJAG_04982","SJAG_01001","SJAG_01017","SJAG_01738","SJAG_00030","SJAG_00368","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[100718,96255,90128,106933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[110389,93825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"},{"relation_name":"part_of","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01738":null,"SJAG_01993":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"active protein retrieval","type":"narrow"},{"name":"maintenance of protein localization","type":"related"},{"name":"protein retention","type":"narrow"},{"name":"protein sequestering","type":"narrow"}],"termid":"GO:0045185","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0042989":null,"GO:0097248":null}}


id: PBO:0075803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 2, pseudogene","termid":"PBO:0075803"}


id: PBO:0091456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3125118_3125119insT","termid":"PBO:0091456"}


id: FYPO:0003814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) does not occur. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072429","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased rate of DNA replication during cellular response to DNA damage","termid":"FYPO:0004241"},{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000298","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished response to S-phase DNA damage checkpoint signaling","synonyms":[{"name":"abolished response to S-phase DNA damage checkpoint signaling abolished","type":"exact"},{"name":"abolished response to S-phase DNA damage checkpoint signaling during mitotic cell cycle","type":"related"},{"name":"abolished response to S-phase DNA damage checkpoint signaling during vegetative growth","type":"exact"},{"name":"abolished response to intra-S DNA damage checkpoint signaling","type":"exact"},{"name":"abolished response to mitotic S-phase DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0003814"}


id: FYPO:0003036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to ultraviolet light. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to UV","synonyms":[{"name":"normal transcription during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal transcription during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003036"}


id: PBO:0067461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 586, pseudogene","termid":"PBO:0067461"}


id: GO:0102408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + sn-2-C16:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102408)","termid":"GO:0102408"}


id: SO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substitution_artifact","synonyms":[{"name":"substitution artifact","type":"exact"}],"termid":"SO:0002176"}


id: GO:2000500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of induction of apoptosis in response to chemical stimulus.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of induction of apoptosis in response to chemical stimulus (obsolete GO:2000500)","synonyms":[{"name":"positive regulation of induction of apoptosis in response to chemical stimulus","type":"exact"},{"name":"positive regulation of induction of apoptosis in response to chemical substance","type":"exact"}],"termid":"GO:2000500"}


id: PBO:0066460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 2","termid":"PBO:0066460"}


id: PBO:0048907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member B","termid":"PBO:0048907"}


id: PBO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A12","termid":"PBO:0044104"}


id: PBO:0056073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6C","termid":"PBO:0056073"}


id: GO:0042575
data:
  {"annotated_genes":["SJAG_02818","SJAG_05197","SJAG_05239","SJAG_00814","SJAG_02627","SJAG_04879","SJAG_02667","SJAG_04877","SJAG_01823","SJAG_02172","SJAG_02908","SJAG_02658","SJAG_00611","SJAG_04994","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113376,95495,93522,101386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[91336,100990,98907,105177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043625"},{"annotations":[106011,109633,111460,103409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008622"},{"annotations":[112420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005760"},{"annotations":[95389,98959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016035"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA polymerase activity and is involved in template directed synthesis of DNA.","definition_xrefs":["GOC:jl","PMID:12045093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_01823":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_02658":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042575","terms_by_termid":{"GO:0005658":null,"GO:0005760":null,"GO:0008622":null,"GO:0016035":null,"GO:0043625":null}}


id: PBO:0075906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6","termid":"PBO:0075906"}


id: PBO:0062919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidinergic receptor P2Y4","termid":"PBO:0062919"}


id: PBO:0091668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm2","termid":"PBO:0091668"}


id: PBO:0053531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 529","termid":"PBO:0053531"}


id: PBO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Rgg8 (predicted)","termid":"PBO:0001827"}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0059483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase A","termid":"PBO:0059483"}


id: PBO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein disulfide isomerase Pdi2","termid":"PBO:0090136"}


id: PBO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smb1","termid":"PBO:0002009"}


id: GO:0004378
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98383],"is_not":false,"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:29515","MetaCyc:RXN-5462"],"synonyms":[{"name":"GDP-D-mannose:D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol 3-alpha-mannosyltransferase activity","type":"exact"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase II","type":"related"},{"name":"GDP-mannose:glycolipid 1,3-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 3-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid II mannosyltransferase activity","type":"related"},{"name":"mannosyltransferase II activity","type":"related"}],"termid":"GO:0004378","terms_by_termid":{"GO:0004378":null}}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: PBO:0111805
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0111805"}


id: PATO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acceleration","termid":"PATO:0001028"}


id: PBO:0030732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_nitrogen_starvation","termid":"PBO:0030732"}


id: FYPO:0000640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is abnormal at the centromere central core. Chromatin silencing is the observed effect of processes that repress transcription at the centromere central core, which is normally assembled into CENP-A-containing chromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere central core","synonyms":[{"name":"abnormal centromere central core chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing at centromere central core during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere central core during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at centromeric central core","type":"exact"},{"name":"abnormal negative regulation of transcription at centromere central core","type":"related"},{"name":"abnormal transcriptional repression at centromere central core","type":"related"}],"termid":"FYPO:0000640"}


id: GO:0035843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound structure present in the nucleus of a spermatozoon. There is variation in the number of endonuclear canals between sperm of different organisms, and some species lack these structures altogether. The endonuclear canal may provide a supporting role for the sperm nucleus, and originates during spermiogenesis from an invagination of the nuclear envelope.","definition_xrefs":["GOC:bf","PMID:18359585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"male germ cell nucleus","termid":"GO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"endonuclear canal","termid":"GO:0035843"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: PBO:0058510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5700","termid":"PBO:0058510"}


id: GO:0055122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to very low light intensity stimulus","termid":"GO:0055122"}


id: GO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein metabolic process","synonyms":[{"name":"lutein metabolism","type":"exact"}],"termid":"GO:0062170"}


id: PBO:0081335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 134","termid":"PBO:0081335"}


id: GO:1901125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving candicidin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin metabolic process","synonyms":[{"name":"candicidin metabolism","type":"exact"}],"termid":"GO:1901125"}


id: PBO:0038800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 6 (pseudogene)","termid":"PBO:0038800"}


id: PR:O43020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S16, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.06","secondary_identifiers":["UniProtKB:O43020"],"synonyms":[{"name":"Spom972h-rpsP","type":"exact"}],"termid":"PR:O43020"}


id: PR:Q53EK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A non-structural maintenance of chromosomes element 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04590","PRO:DNx","PANTHER:PTHR20973:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosomes element 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.05","secondary_identifiers":["UniProtKB:Q53EK2"],"synonyms":[{"name":"Spom972h-NSMCE1","type":"exact"},{"name":"non-SMC element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q53EK2"}


id: PBO:0027935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_in_stationary_phase_during_glucose_starvation","termid":"PBO:0027935"}


id: GO:0070832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with three consecutive N-methylation steps that are carried out on phospho-bases, phosphoethanolamine, phospho-N-methylethanolamine, and phospho-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-choline","termid":"GO:0070832"}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: PBO:0052945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte associated protein 2","termid":"PBO:0052945"}


id: PBO:0091149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38","termid":"PBO:0091149"}


id: PBO:0072041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 11","termid":"PBO:0072041"}


id: GO:0051209
data:
  {"annotated_genes":["SJAG_03850","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89482],"is_not":false,"summary":null,"term":"GO:0051209"},{"annotations":[104736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the cytosolic compartment.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:mtg_lung","PMID:1814929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sequestering of calcium ion","termid":"GO:0051283"},{"relation_name":"is_a","term_name":"calcium ion transmembrane import into cytosol","termid":"GO:0097553"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) mobilization","type":"broad"},{"name":"calcium mobilization","type":"broad"},{"name":"cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+)","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051209","terms_by_termid":{"GO:0051209":null,"GO:0061454":null}}


id: PBO:0048492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 4","termid":"PBO:0048492"}


id: PBO:0059404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33 pseudogene 1","termid":"PBO:0059404"}


id: PR:P78968
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pzh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP-Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.08","synonyms":[{"name":"Spom972h-pzh1","type":"exact"}],"termid":"PR:P78968"}


id: PBO:0031312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell","termid":"PBO:0031312"}


id: GO:0046444
data:
  {"annotated_genes":["SJAG_04845","SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110180],"is_not":false,"summary":null,"term":"GO:0046444"},{"annotations":[111787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving FMN, riboflavin 5'-(dihydrogen phosphate), a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["PMID:20822113","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01937":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"FMN metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FMN metabolism","type":"exact"}],"termid":"GO:0046444","terms_by_termid":{"GO:0009398":null,"GO:0046444":null}}


id: GO:0006241
data:
  {"annotated_genes":["SJAG_02887","SJAG_05024","SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96151],"is_not":false,"summary":null,"term":"GO:0006241"},{"annotations":[83942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[89061,110978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CTP metabolic process","termid":"GO:0046036"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTP anabolism","type":"exact"},{"name":"CTP biosynthesis","type":"exact"},{"name":"CTP formation","type":"exact"},{"name":"CTP synthesis","type":"exact"}],"termid":"GO:0006241","terms_by_termid":{"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: GO:0036167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reversible switch of a cell from one phenotype to another that occurs upon infection of a host or host cell. For example, Candida albicans switches from a unicellular form to an invasive multicellular filamentous form upon infection of host tissue. Phenotypic switching begins with changes in cell morphology and altered gene expression patterns and ends when the morphology of a population of cells has reverted back to the default state, accompanied by altered expression patterns.","definition_xrefs":["Wikipedia:Phenotypic_switching","GOC:di","PMID:16696644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"},{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenotypic switching in response to host","termid":"GO:0036167"}


id: GO:0021656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 2. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 structural organization","synonyms":[{"name":"rhombomere 2 structural organisation","type":"exact"}],"termid":"GO:0021656"}


id: PBO:0076974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 5","termid":"PBO:0076974"}


id: PR:O43061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug136 gene.","definition_xrefs":["UniProtKB:O43061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 136 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.08","synonyms":[{"name":"Spom972h-mug136","type":"exact"}],"termid":"PR:O43061"}


id: PBO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0000261"}


id: PATO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex quadrilateral is a parallelogram if and only if any one of the following statements are true:\\n1. Each diagonal divides the quadrilateral into two congruent triangles with the same orientation.\\n2. The opposite sides are congruent in pairs.\\n3. The diagonals bisect each other.\\n4. The opposite angles are congruent in pairs.\\n5. The sum of the squares of the sides equals the sum of the squares of the diagonals. (This is the parallelogram law)\\n6.It possesses rotational symmetry.\\n7.One pair of opposite sides are parallel and congruent.\\n8.Two pairs of adjacent angles are supplementary.","definition_xrefs":["wikipedia:Parallelogram"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parallelogram","termid":"PATO:0002317"}


id: FYPO:0004107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during mitotic G2 phase","synonyms":[{"name":"normal protein accumulation during mitotic G2 phase","type":"related"},{"name":"normal protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004107"}


id: PBO:0040594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 2","termid":"PBO:0040594"}


id: PBO:0076594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 15","termid":"PBO:0076594"}


id: GO:0032983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluK1-3 (also called GluR5-7), GluK4 (KA1) and GluK5 (KA2) subunits.","definition_xrefs":["PMID:18655795","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"},{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"},{"relation_name":"is_a","term_name":"sodium channel complex","termid":"GO:0034706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"kainate selective glutamate receptor complex","termid":"GO:0032983"}


id: PBO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-methylase subunit Trm72 (predicted)","termid":"PBO:0013480"}


id: PBO:0004315
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.48","termid":"PBO:0004315"}


id: PBO:0078653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (CTT) 6-1","termid":"PBO:0078653"}


id: PBO:0070863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 1","termid":"PBO:0070863"}


id: FYECO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for more than 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth >24 hrs","synonyms":[{"name":"growth >24 hours","type":"exact"}],"termid":"FYECO:0000217"}


id: GO:0005930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.","definition_xrefs":["GOC:bf","GOC:cilia","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"ciliary plasm","termid":"GO:0097014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axoneme","secondary_identifiers":["GO:0035086","Wikipedia:Axoneme","GO:0035085"],"synonyms":[{"name":"ciliary axoneme","type":"exact"},{"name":"cilium axoneme","type":"exact"},{"name":"flagellar axoneme","type":"exact"},{"name":"flagellum axoneme","type":"exact"}],"termid":"GO:0005930"}


id: GO:0140788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a L-glutamate across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:29642010","PMID:27133463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-glutamate uniporter activity","secondary_identifiers":["RHEA:66336"],"synonyms":[{"name":"glutamate uniporter activity","type":"broad"}],"termid":"GO:0140788"}


id: PBO:0038579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1","termid":"PBO:0038579"}


id: GO:2000008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to the cell surface.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell surface","termid":"GO:0034394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell surface","synonyms":[{"name":"regulation of protein localisation at cell surface","type":"exact"},{"name":"regulation of protein localization at cell surface","type":"exact"}],"termid":"GO:2000008"}


id: FYPO:0002992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature G1/S phase transition during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to methyl methanesulfonate","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to MMS","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002992"}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: GO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanoyl-CoA + enzyme N6-(dihydrolipoyl)lysine = CoA + enzyme N6-(S-[2-methylpropanoyl]dihydrolipoyl)lysine.","definition_xrefs":["RHEA:18865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity","secondary_identifiers":["GO:0004147","EC:2.3.1.168","MetaCyc:2.3.1.168-RXN"],"synonyms":[{"name":"2-methylpropanoyl-CoA:enzyme-6-N-(dihydrolipoyl)lysine:S-(2-methylpropanoyl)transferase activity","type":"related"},{"name":"2-methylpropanoyl-CoA:enzyme-N6-(dihydrolipoyl)lysine:S-(2-methylpropanoyl)transferase activity","type":"related"},{"name":"dihydrolipoamide branched chain acyltransferase activity","type":"exact"},{"name":"dihydrolipoamide branched chain transacylase activity","type":"exact"},{"name":"dihydrolipoyl transacylase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:2-methylpropanoyl-CoA S-(2-methylpropanoyl)transferase activity","type":"exact"}],"termid":"GO:0043754"}


id: GO:0047067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H(2) + menaquinone = reduced menaquinone.","definition_xrefs":["RHEA:18641","EC:1.12.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with a quinone or similar compound as acceptor","termid":"GO:0046994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydrogen:quinone oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R02965","MetaCyc:1.12.5.1-RXN"],"synonyms":[{"name":"hydrogen-ubiquinone oxidoreductase activity","type":"related"},{"name":"hydrogen:menaquinone oxidoreductase activity","type":"related"},{"name":"membrane-bound hydrogenase activity","type":"narrow"},{"name":"quinone-reactive Ni/Fe-hydrogenase activity","type":"related"}],"termid":"GO:0047067"}


id: PBO:0058752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6876","termid":"PBO:0058752"}


id: GO:0031154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the culminant over time, from its formation to the mature structure. Culmination begins with a morphogenetic change of the finger-like or migratory slug giving rise to an organized structure containing a stalk and a sorus. This process is the final stage of sorocarp development.","definition_xrefs":["GOC:mah","ISBN:0521583640","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"sorocarp development","termid":"GO:0030587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"culmination involved in sorocarp development","synonyms":[{"name":"culminant development","type":"exact"},{"name":"culmination during fruiting body development","type":"exact"},{"name":"culmination during sorocarp development","type":"related"}],"termid":"GO:0031154"}


id: FYPO:0004831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1902967","GO:1990023","PMID:16824200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone","termid":"FYPO:0003841"},{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle during anaphase","termid":"FYPO:0007729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase","type":"exact"}],"termid":"FYPO:0004831"}


id: GO:0070276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any halogen, elements of Group VII; includes metabolism of halogen-containing compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"halogen metabolic process","synonyms":[{"name":"halogen metabolism","type":"exact"}],"termid":"GO:0070276"}


id: FYPO:0008119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure indistinguishable from wild type) when the cell is subject to phophate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal morphology during phosphate starvation","termid":"FYPO:0008119"}


id: PBO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 4","termid":"PBO:0044653"}


id: GO:0018559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1-dichloro-2-(dihydroxy-4'-chorophenyl)-2-(4-chlorophenyl)ethene + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate.","definition_xrefs":["UM-BBD_reactionID:r0442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethene 1,2-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"synonyms":[{"name":"1,1-dichloro-2-(dihydroxy-4-chlorophenyl)-(4-chlorophenyl)ethylene 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018559"}


id: PBO:0068918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 161, pseudogene","termid":"PBO:0068918"}


id: PBO:0054308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1700","termid":"PBO:0054308"}


id: GO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular complex that binds lipoprotein receptors VLDLR and APOER2, cadherin-related neuronal receptors (CNRs) or alpha3beta1 integrin and induces various downstream, reelin-dependent, phosphorylation cascades. It ultimately affects polarization, differentiation, neuronal migration and layer formation in the embryonic brain and neuron growth, maturation, and synaptic activity in the postnatal and adult brain.","definition_xrefs":["GOC:bhm","PMID:21844191","PMID:28887403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"reelin complex","termid":"GO:0110157"}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: GO:0009506
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"},{"relation_name":"part_of","term_name":"symplast","termid":"GO:0055044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plasmodesma","secondary_identifiers":["Wikipedia:Plasmodesma"],"synonyms":[{"name":"plasmodesmata","type":"exact"}],"termid":"GO:0009506"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: PBO:0080223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasoactive intestinal peptide receptor 2","termid":"PBO:0080223"}


id: PBO:0054411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1807","termid":"PBO:0054411"}


id: PBO:0091702
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YKR002W","termid":"PBO:0091702"}


id: PBO:0065853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 4","termid":"PBO:0065853"}


id: GO:0048804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of female genitalia are generated and organized from the genital disc.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived genitalia morphogenesis","termid":"GO:0048805"},{"relation_name":"is_a","term_name":"female genitalia morphogenesis","termid":"GO:0048807"},{"relation_name":"part_of","term_name":"imaginal disc-derived female genitalia development","termid":"GO:0007486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived female genitalia morphogenesis","synonyms":[{"name":"female genital morphogenesis","type":"broad"}],"termid":"GO:0048804"}


id: PBO:0034371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_1_homology_relationship_with","termid":"PBO:0034371"}


id: GO:0030876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an alpha and a beta receptor subunit and an interleukin ligand. In human, Interleukin-19, -20 and -24 bind IL20RA/IL20RB receptor subunits and Interleukin-20 and -24 bind IL22RA1/IL20RB receptor subunits.","definition_xrefs":["PMID:12351624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"interleukin-20 receptor complex","synonyms":[{"name":"IL-20 receptor complex","type":"exact"}],"termid":"GO:0030876"}


id: GO:1903720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23675531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"negatively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of I-kappaB phosphorylation","synonyms":[{"name":"down regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down regulation of IKB phosphorylation","type":"exact"},{"name":"down regulation of IkappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"down-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of IKB phosphorylation","type":"exact"},{"name":"down-regulation of IkappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"downregulation of I-kappaB phosphorylation","type":"exact"},{"name":"downregulation of IKB phosphorylation","type":"exact"},{"name":"downregulation of IkappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"inhibition of I-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of IKB phosphorylation","type":"narrow"},{"name":"inhibition of IkappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"negative regulation of IKB phosphorylation","type":"exact"},{"name":"negative regulation of IkappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903720"}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_00244","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111124,101260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[101261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971","KEGG_REACTION:R05779"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: SO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of intronic nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_1_intron_homing_endonuclease_target_region","synonyms":[{"name":"group 1 intron homing endonuclease target region","type":"exact"}],"termid":"SO:0000354"}


id: GO:0004897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ciliary neurotrophic factor (CNTF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor activity","synonyms":[{"name":"CNTF receptor activity","type":"exact"},{"name":"gp130","type":"related"}],"termid":"GO:0004897"}


id: PBO:0039861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 25","termid":"PBO:0039861"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: GO:0102045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-3,4-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:8285670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-chlorobenzoate-3,4-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10422"],"termid":"GO:0102045"}


id: PBO:0017920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain Sqs1(predicted)","termid":"PBO:0017920"}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: PBO:0072531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 61","termid":"PBO:0072531"}


id: GO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylation (obsolete GO:0016577)","termid":"GO:0016577"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: PBO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf21","termid":"PBO:0001613"}


id: PATO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality in which the EM radiation is within the fiat range of the spectrum visible deemed to be light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optical quality","termid":"PATO:0001300"}


id: PBO:0029547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_degradation_of_DSR-containing_RNA","termid":"PBO:0029547"}


id: PBO:0069297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 553, pseudogene","termid":"PBO:0069297"}


id: GO:0019059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of processes involved in the start of virus infection of cells.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of viral infection (obsolete GO:0019059)","synonyms":[{"name":"initiation of viral infection","type":"exact"}],"termid":"GO:0019059"}


id: PBO:0080529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 2A","termid":"PBO:0080529"}


id: PBO:0040523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-azacytidine induced 2","termid":"PBO:0040523"}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["Wikipedia:Habituation","PMID:11390637","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: PBO:0077763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 22","termid":"PBO:0077763"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["PMID:7729583","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: GO:0043414
data:
  {"annotated_genes":["SJAG_02350","SJAG_04735","SJAG_02821","SJAG_02024","SJAG_04890","SJAG_04649","SJAG_03901","SJAG_03332","SJAG_05249","SJAG_00499","SJAG_00255","SJAG_00943","SJAG_04680","SJAG_00744","SJAG_02377","SJAG_01261","SJAG_00325","SJAG_03289","SJAG_02281","SJAG_03877","SJAG_01269","SJAG_02042","SJAG_04367","SJAG_01958","SJAG_03008","SJAG_04034","SJAG_02417","SJAG_03410","SJAG_04453","SJAG_04736","SJAG_01375","SJAG_04848","SJAG_02099","SJAG_00722","SJAG_02637","SJAG_02386","SJAG_03016","SJAG_03713","SJAG_02302","SJAG_05334","SJAG_03367","SJAG_01314","SJAG_04993","SJAG_04181","SJAG_00886","SJAG_03773","SJAG_02352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[97457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[92319,91003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[91292,91727,87426,112268,109687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[65111,94947,85759,105169,59078,63070,94506,63678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[94882,104164,106271,90233,107411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[58334,111771,115009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[106230,102833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[86579,101841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[92320,93948,101990,98972,86580,104546,108218,94169,110889,94176,84727,87057,90031,97048,88900,90802,114001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[95492,97458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[100219,103337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[110890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[84418,90032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[93949,98973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The covalent attachment of a methyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylation","termid":"GO:0032259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02637":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule methylation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0043414","terms_by_termid":{"GO:0000452":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0031167":null,"GO:0036261":null,"GO:0070475":null,"GO:0070476":null,"GO:0070901":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null}}


id: GO:0036060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a slit diaphragm, specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration.","definition_xrefs":["PMID:20633639","GOC:mtg_kidney_jan10","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm assembly","termid":"GO:0036058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"slit diaphragm assembly","termid":"GO:0036060"}


id: GO:0003789
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88643],"is_not":false,"summary":null,"term":"GO:0003789"}]},"cv_name":"molecular_function","definition":"Binding to an actin subunit and promoting its dissociation from an actin filament by a local change in actin subunit conformation and orientation, and severing of filaments.","definition_xrefs":["PMID:23727096","PMID:23395798","PMID:11812157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex destabilizing activity","termid":"GO:0140776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"actin filament severing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003789","terms_by_termid":{"GO:0003789":null}}


id: PBO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_maintenance","termid":"PBO:0031308"}


id: FYPO:0004017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"},{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000652","FYPO:0000654","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cytochrome-c oxidase activity","termid":"FYPO:0004017"}


id: GO:1905552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GO_REF:0000058","PMID:22768340","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"positively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"activation of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization in ER","type":"narrow"},{"name":"activation of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"activation of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"positive regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"positive regulation of protein localization in ER","type":"exact"},{"name":"positive regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization in ER","type":"exact"},{"name":"up regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization in ER","type":"exact"},{"name":"up-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"up-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization in ER","type":"exact"},{"name":"upregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"upregulation of protein localization to endoplasmic reticulum","type":"exact"}],"termid":"GO:1905552"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108420],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14633","EC:7.2.2.3","MetaCyc:RXN-17739"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["EC:4.1.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: SO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long, intervening non-coding RNA.","definition_xrefs":["PMID:23463798","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA_gene","synonyms":[{"name":"lincRNA gene","type":"exact"}],"termid":"SO:0001641"}


id: PBO:0004168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paxillin-like protein Pxl1","termid":"PBO:0004168"}


id: FYPO:0009010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to ultraviolet light.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress","termid":"FYPO:0002046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to UV during vegetative growth","synonyms":[{"name":"resistance to ultraviolet light during vegetative growth","type":"exact"}],"termid":"FYPO:0009010"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12172:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: FYPO:0002691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing menadione.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on menadione","synonyms":[{"name":"normal cell population growth in presence of menadione","type":"exact"},{"name":"normal cell population growth on menadione","type":"exact"},{"name":"normal cellular response to menadione","type":"related"},{"name":"normal vegetative cell population growth on menadione","type":"exact"}],"termid":"FYPO:0002691"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0054273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1661","termid":"PBO:0054273"}


id: FYPO:0002761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule bundle formation","synonyms":[{"name":"abnormal microtubule array formation","type":"related"}],"termid":"FYPO:0002761"}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: GO:0102615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + NADPH + O2 + H+ = 2alpha-hydroxy-ent-cassadiene + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ent-cassadiene-C2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15462","RHEA:55484"],"termid":"GO:0102615"}


id: PBO:0072125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 2","termid":"PBO:0072125"}


id: PBO:0053869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1144","termid":"PBO:0053869"}


id: GO:0005637
data:
  {"annotated_genes":["SJAG_01745","SJAG_03491","SJAG_03449","SJAG_00680","SJAG_03657","SJAG_05226","SJAG_01263","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85210,87440,89940,98897,99494,102008,113594,114192],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[102009,113595],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01263":null,"SJAG_01745":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1612527463"],"synonyms":[{"name":"inner envelope","type":"broad"},{"name":"inner nuclear membrane","type":"exact"},{"name":"nucleus inner membrane","type":"exact"}],"termid":"GO:0005637","terms_by_termid":{"GO:0005637":null,"GO:1990862":null}}


id: PBO:0030181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population","termid":"PBO:0030181"}


id: PBO:0070393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAR related orphan receptor A","termid":"PBO:0070393"}


id: PBO:0064232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 2","termid":"PBO:0064232"}


id: PBO:0053999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1323","termid":"PBO:0053999"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: PR:Q9P374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C19B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.07c","synonyms":[{"name":"Spom972h-SPAC19B12.07c","type":"exact"}],"termid":"PR:Q9P374"}


id: PBO:0049373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 3","termid":"PBO:0049373"}


id: PBO:0052974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 4","termid":"PBO:0052974"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-4002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: GO:0071933
data:
  {"annotated_genes":["SJAG_01732","SJAG_03455","SJAG_04001","SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86995,94024,99346,103230],"is_not":false,"summary":null,"term":"GO:0071933"}]},"cv_name":"molecular_function","definition":"Binding to an Arp2/3 complex, a protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_02228":null,"SJAG_03455":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Arp2/3 complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071933","terms_by_termid":{"GO:0071933":null}}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["GOC:pz","EC:4.2.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: PBO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichodermin","termid":"PBO:0030262"}


id: PBO:0081819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 12, Y-linked","termid":"PBO:0081819"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: PATO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's parts or projections being interlocked; for example, the fingers of two hands that are clasped.","definition_xrefs":["PATOC:wdahdul"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interdigitated","termid":"PATO:0001960"}


id: GO:1903985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal D-glucose absorption.","definition_xrefs":["GOA:als","GO_REF:0000058","GOC:TermGenie","PMID:22114352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal D-glucose absorption","termid":"GO:0001951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal D-glucose absorption","termid":"GO:1903985"}


id: PBO:0028261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_decreased_numbers","termid":"PBO:0028261"}


id: PBO:0063492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 3","termid":"PBO:0063492"}


id: FYPO:0001832
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which phosphoglycerate mutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished phosphoglycerate mutase activity","synonyms":[{"name":"phosphoglycerate mutase activity abolished","type":"exact"}],"termid":"FYPO:0001832"}


id: PBO:0091012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio1","termid":"PBO:0091012"}


id: PBO:0029957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cerulenin","termid":"PBO:0029957"}


id: PBO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKTN antisense RNA 1","termid":"PBO:0047667"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: PBO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme Hus5","termid":"PBO:0000767"}


id: PBO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complements E. coli PyrB","termid":"PBO:0034706"}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: GO:2000748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation rhythm.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defecation","termid":"GO:2000294"},{"relation_name":"is_a","term_name":"regulation of defecation rhythm","termid":"GO:2000746"},{"relation_name":"positively_regulates","term_name":"defecation rhythm","termid":"GO:0035882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of defecation rhythm","synonyms":[{"name":"positive regulation of DMP","type":"exact"},{"name":"positive regulation of defecation behavior","type":"related"},{"name":"positive regulation of defecation cycle","type":"exact"},{"name":"positive regulation of defecation motor program","type":"exact"}],"termid":"GO:2000748"}


id: FYPO:0000116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to zinc ions. Cells stop growing (and may die) at a concentration of zinc ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to zinc","synonyms":[{"name":"hypersensitive to zinc","type":"exact"},{"name":"sensitive to zinc during mitotic cell cycle","type":"related"},{"name":"sensitive to zinc during vegetative growth","type":"exact"},{"name":"sensitive to zinc ions","type":"exact"}],"termid":"FYPO:0000116"}


id: PBO:0073744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3","termid":"PBO:0073744"}


id: PBO:0046245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 2","termid":"PBO:0046245"}


id: PBO:0082799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; promotes association of TRAPPII-specific subunits with the TRAPP core complex; sedlin related; human Sedlin mutations cause SEDT, a skeletal disorder","termid":"PBO:0082799"}


id: GO:0008370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. These are terms that have been removed from the active component ontology.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component (obsolete GO:0008370)","termid":"GO:0008370"}


id: FYECO:0000248
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115333,115597],"is_not":false,"summary":null,"term":"FYECO:0000248"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which latrunculin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ latA","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"+ latrunculin A","type":"related"}],"termid":"FYECO:0000248","terms_by_termid":{"FYECO:0000248":null,"FYPO_EXT:0000001":null}}


id: PBO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation","termid":"PBO:0036194"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.47-RXN","EC:2.4.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acylsphingosine galactosyltransferase activity (obsolete GO:0047263)","synonyms":[{"name":"UDP galactose-N-acylsphingosine galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acylsphingosine D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acylsphingosine D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-acylsphingosine galactosyltransferase activity","type":"related"}],"termid":"GO:0047263"}


id: PBO:0064368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2","termid":"PBO:0064368"}


id: PBO:0079384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI pseudogene 2","termid":"PBO:0079384"}


id: PBO:0085768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase related to mammalian GSK-3 glycogen synthase kinases; GSK-3 homologs (Mck1p, Rim11p, Mrk1p, Ygk3p) are involved in control of Msn2p-dependent transcription of stress responsive genes and in protein degradation; YGK3 has a paralog, MCK1, that arose from the whole genome duplication","termid":"PBO:0085768"}


id: GO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a symbiont organism mediated by a substance secreted by a host organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via secreted substance (obsolete GO:0052213)","synonyms":[{"name":"interaction with symbiont via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with symbiont via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052213"}


id: PBO:0059573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1X pseudogene 1","termid":"PBO:0059573"}


id: PATO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which occurs during the light cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light phase","termid":"PATO:0000503"}


id: PBO:0062626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 3 pseudogene","termid":"PBO:0062626"}


id: PBO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2","termid":"PBO:0048789"}


id: PBO:0004405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-succinyltransferase, e2 component of oxoglutarate dehydrogenase complex Kdg2 (predicted)","termid":"PBO:0004405"}


id: PBO:0063994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 28","termid":"PBO:0063994"}


id: GO:0035305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the stops, prevents, or reduces the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dephosphorylation","synonyms":[{"name":"down regulation of dephosphorylation","type":"exact"},{"name":"down-regulation of dephosphorylation","type":"exact"},{"name":"downregulation of dephosphorylation","type":"exact"},{"name":"inhibition of dephosphorylation","type":"narrow"}],"termid":"GO:0035305"}


id: GO:1904729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal lipid absorption.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18768481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal lipid absorption","termid":"GO:1904729"}


id: GO:0140925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-phenylalanine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11069779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"phenylalanine transport","termid":"GO:0015823"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-phenylalanine import across plasma membrane","termid":"GO:0140925"}


id: PBO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.2.8","termid":"PBO:0001461"}


id: GO:1904524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA amplification.","definition_xrefs":["PMID:26195783","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA amplification","synonyms":[{"name":"down regulation of DNA amplification","type":"exact"},{"name":"down-regulation of DNA amplification","type":"exact"},{"name":"downregulation of DNA amplification","type":"exact"},{"name":"inhibition of DNA amplification","type":"narrow"}],"termid":"GO:1904524"}


id: GO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate commitment","termid":"GO:0060222"},{"relation_name":"regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"}


id: PATO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased size","secondary_identifiers":["PATO:0001202"],"synonyms":[{"name":"big","type":"related"},{"name":"enlarged","type":"related"},{"name":"expanded","type":"related"},{"name":"great","type":"related"},{"name":"large","type":"related"}],"termid":"PATO:0000586"}


id: GO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor is necessary for cleavage but not for poly(A) addition in mRNA 3' end processing; can stimulate poly(A) addition on substrates with a CstF binding site upstream of the AAUAAA hexanucleotide.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage stimulation factor activity (obsolete GO:0030365)","synonyms":[{"name":"CstF","type":"exact"},{"name":"cleavage stimulation factor activity","type":"exact"}],"termid":"GO:0030365"}


id: PBO:0089329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant","termid":"PBO:0089329"}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_03680","SJAG_01777","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102013,110059],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[102011,85894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: PBO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptin (predicted)","termid":"PBO:0004425"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["PMID:16624291","Wikipedia:Bleb_(cell_biology)","PMID:12083798","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: SO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a gene from the 5' most TSS to the 3' TSS.","definition_xrefs":["BBOP:nw"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001240 TSS_region (obsolete SO:0001240)","synonyms":[{"name":"TSS region","type":"exact"}],"termid":"SO:0001240"}


id: GO:0106347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-O-methyladenosine in U2 snRNA + S-adenosyl-L-methionine = an N6-methyl-2'-O-methyladenosine in U2 snRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:62672","PMID:31913360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"U2 snRNA 2'-O-methyladenosine m6 methyltransferase activity","termid":"GO:0106347"}


id: GO:1905669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TORC1 complex.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000079","PMID:21952218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"TORC1 complex assembly","synonyms":[{"name":"TOR complex 1 assembly","type":"exact"},{"name":"TOR complex 1 formation","type":"exact"},{"name":"TORC 1 complex assembly","type":"exact"},{"name":"TORC 1 complex formation","type":"exact"},{"name":"TORC1 assembly","type":"exact"},{"name":"TORC1 complex formation","type":"exact"},{"name":"TORC1 formation","type":"exact"},{"name":"dTOR/dRaptor complex assembly","type":"narrow"},{"name":"dTOR/dRaptor complex formation","type":"narrow"},{"name":"dTORC1 assembly","type":"narrow"},{"name":"dTORC1 formation","type":"narrow"},{"name":"mTORC1 assembly","type":"narrow"},{"name":"mTORC1 formation","type":"narrow"},{"name":"nutrient sensitive complex assembly","type":"exact"},{"name":"nutrient sensitive complex formation","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex assembly","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex formation","type":"exact"}],"termid":"GO:1905669"}


id: GO:0032366
data:
  {"annotated_genes":["SJAG_00261","SJAG_01407","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97554,97746,102389],"is_not":false,"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_01329":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular sterol transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032366","terms_by_termid":{"GO:0032366":null}}


id: GO:0036279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm in response to deprivation of glucose.","definition_xrefs":["PMID:3541942","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to glucose starvation","termid":"GO:0042149"},{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus in response to glucose starvation","termid":"GO:0036279"}


id: GO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-methylcytosine metabolic process","termid":"GO:0019857"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-methylcytosine biosynthetic process","synonyms":[{"name":"5-methylcytosine anabolism","type":"exact"},{"name":"5-methylcytosine biosynthesis","type":"exact"},{"name":"5-methylcytosine formation","type":"exact"},{"name":"5-methylcytosine synthesis","type":"exact"}],"termid":"GO:0046082"}


id: PBO:0068080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 386","termid":"PBO:0068080"}


id: GO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The protein localization to chromatin by which a cohesin ring complex is topologically linked to dsDNA (leading strand) as part of the mitotic cell cycle.","definition_xrefs":["PMID:29358048","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cohesin loading","termid":"GO:0061780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic cohesin dsDNA (leading strand) loading","termid":"GO:0062021"}


id: FYPO:0003426
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to pheromone","synonyms":[{"name":"decreased RNA accumulation during cellular response to pheromone","type":"related"},{"name":"decreased transcript level during cellular response to pheromone","type":"exact"},{"name":"reduced RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0003426"}


id: GO:0021765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cingulate gyrus over time from its initial formation until its mature state. The cingulate gyrus is a ridge in the cerebral cortex located dorsal to the corpus callosum.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cingulate gyrus development","termid":"GO:0021765"}


id: PBO:0061718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2B antisense RNA 1","termid":"PBO:0061718"}


id: PBO:0049801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocretin neuropeptide precursor","termid":"PBO:0049801"}


id: GO:0052053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host enzyme activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host catalytic activity (obsolete GO:0052053)","synonyms":[{"name":"down regulation by symbiont of host enzyme activity","type":"exact"},{"name":"down-regulation by symbiont of host enzyme activity","type":"exact"},{"name":"downregulation by symbiont of host enzyme activity","type":"exact"},{"name":"inhibition by symbiont of host enzyme activity","type":"narrow"},{"name":"inhibition of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host enzyme activity","type":"exact"},{"name":"negative regulation by symbiont of host molecular function","type":"broad"}],"termid":"GO:0052053"}


id: FYPO:0001684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to purvalanol A","synonyms":[{"name":"decreased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"decreased transcript level during cellular response to purvalanol A","type":"exact"},{"name":"reduced RNA level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001684"}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: PBO:0063968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 2","termid":"PBO:0063968"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: PR:O94661
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02782","PANTHER:PTHR20913:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.03c","secondary_identifiers":["UniProtKB:O94661"],"synonyms":[{"name":"Spom972h-TBC1D20","type":"exact"}],"termid":"PR:O94661"}


id: PBO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"changed_by","termid":"PBO:0014743"}


id: PBO:0040599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG cochaperone 3","termid":"PBO:0040599"}


id: GO:0160077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a single lipid droplet is created from the fusion of two or more lipid droplets.","definition_xrefs":["PMID:34508658","PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet fusion","termid":"GO:0160077"}


id: PBO:0089592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-aminobenzoate synthase","termid":"PBO:0089592"}


id: PBO:0075425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 11B","termid":"PBO:0075425"}


id: PBO:0078930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-2","termid":"PBO:0078930"}


id: PBO:0040951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 22","termid":"PBO:0040951"}


id: GO:0005872
data:
  {"annotated_genes":["SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95299],"is_not":false,"summary":null,"term":"GO:0005872"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the minus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"minus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005872","terms_by_termid":{"GO:0005872":null}}


id: FYPO:0000261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. Multiple different phenotypes due to a single mutation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pleiotropic effects (obsolete FYPO:0000261)","synonyms":[{"name":"pleiotropic effects during vegetative growth","type":"exact"}],"termid":"FYPO:0000261"}


id: PBO:0063228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 Y-linked","termid":"PBO:0063228"}


id: PBO:0074581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 1B","termid":"PBO:0074581"}


id: GO:0047461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphate + (+)-delta-cadinene.","definition_xrefs":["EC:4.2.3.13","MetaCyc:4.6.1.11-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(+)-delta-cadinene synthase activity","secondary_identifiers":["RHEA:19525"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (cyclizing, (+)-delta-cadinene-forming)","type":"related"},{"name":"D-cadinene synthase activity","type":"related"}],"termid":"GO:0047461"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00443","PANTHER:PTHR10359:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: PBO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 9","termid":"PBO:0042247"}


id: PBO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein (prediected)","termid":"PBO:0000451"}


id: GO:1905449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["GOC:TermGenie","PMID:18832707","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"regulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905449"}


id: PBO:0075753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit beta","termid":"PBO:0075753"}


id: FYPO:0006254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of ribosomal footprint lengths in a cell differs from wild type. Ribosomal footprints are RNA fragments protected by the ribosome, and normally range from 28-31 nucleotides long.","definition_xrefs":["PomBase:mah","PMID:28945192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ribosome footprint size distribution","synonyms":[{"name":"abnormal ribosome footprint length distribution","type":"exact"},{"name":"abnormal ribosome footprint size distribution during mitotic cell cycle","type":"related"},{"name":"abnormal ribosome footprint size distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006254"}


id: PR:O94472
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pbn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.02","synonyms":[{"name":"Spom972h-SPCC1919.02","type":"exact"}],"termid":"PR:O94472"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: GO:0032172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane within the germ tube of filamentous fungi at sites where a septum will form; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"part_of","term_name":"germ tube","termid":"GO:0032179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"germ tube septin ring","termid":"GO:0032172"}


id: PBO:0088525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex zinc finger subunit Yth1","termid":"PBO:0088525"}


id: GO:1905936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germ cell proliferation","termid":"GO:1905936"}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: GO:1902281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP-dependent RNA helicase activity.","definition_xrefs":["GOC:rb","PMID:23721653","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of helicase activity","termid":"GO:0051097"},{"relation_name":"is_a","term_name":"regulation of RNA helicase activity","termid":"GO:1902280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA helicase activity","synonyms":[{"name":"down regulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"down-regulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"downregulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"inhibition of ATP-dependent RNA helicase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:1902281"}


id: PBO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked non-specific mental retardation","termid":"PBO:0001530"}


id: PBO:0052022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 2","termid":"PBO:0052022"}


id: PBO:0012606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012606"}


id: FYPO:0008001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to menadione when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr","PMID:35618649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to menadione in stationary phase","synonyms":[{"name":"sensitive to menadione during stationary phase","type":"exact"}],"termid":"FYPO:0008001"}


id: PBO:0027597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0027597"}


id: PBO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 8","termid":"PBO:0070855"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: GO:0102031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-acetamido-4,6-dideoxy-alpha-D-galactose + beta-D-ManNAcA-(1->4)-alpha-D-GlcNAc-1-diphospho-ditrans,polycis-undecaprenol = H+ + alpha-D-FucNAc4-(1->4)-beta-D-ManNAcA-(1->4)-D-GlcNAc-undecaprenyl diphosphate + dTDP.","definition_xrefs":["EC:2.4.1.325","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"4-acetamido-4,6-dideoxy-D-galactose transferase activity","secondary_identifiers":["MetaCyc:FUC4NACTRANS-RXN","RHEA:28759"],"termid":"GO:0102031"}


id: PBO:0050801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HtrA serine peptidase 1","termid":"PBO:0050801"}


id: PBO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 8","termid":"PBO:0060572"}


id: PBO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 9","termid":"PBO:0075179"}


id: MOD:01733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01733"}


id: PBO:0074703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71C","termid":"PBO:0074703"}


id: GO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of protecting a cell from natural killer cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protection from natural killer cell mediated cytotoxicity","synonyms":[{"name":"protection from NK cell mediated cell death","type":"exact"},{"name":"protection from NK cell mediated cell killing","type":"exact"},{"name":"protection from NK cell mediated cytolysis","type":"related"},{"name":"protection from NK cell mediated cytotoxicity","type":"exact"},{"name":"protection from natural killer cell mediated cell death","type":"exact"},{"name":"protection from natural killer cell mediated cell killing","type":"exact"},{"name":"protection from natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0042270"}


id: SO:1000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the secondary structure (folding) of the RNA transcript molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000126 sequence_variant_affecting_transcript_secondary_structure (obsolete SO:1000126)","synonyms":[{"name":"mutation affecting transcript secondary structure","type":"related"},{"name":"sequence variant affecting transcript secondary structure","type":"exact"}],"termid":"SO:1000126"}


id: PBO:0065577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 2","termid":"PBO:0065577"}


id: FYPO:0002052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal sporulation frequency","synonyms":[{"name":"normal ascospore formation frequency","type":"exact"},{"name":"normal sporulation occurrence","type":"exact"}],"termid":"FYPO:0002052"}


id: PBO:0018168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit Lsg1","termid":"PBO:0018168"}


id: PBO:0091425
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrameric(1)","termid":"PBO:0091425"}


id: GO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion development","synonyms":[{"name":"trigeminal ganglia development","type":"related"}],"termid":"GO:0061551"}


id: PBO:0083123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; involved in synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; G353A missense mutation in human ortholog ALG3 implicated in carbohydrate deficient glycoprotein syndrome type IV, which is characterized by microcephaly, severe epilepsy, minimal psychomotor development, partial deficiency of sialic acids in serum glycoproteins; wild-type human ALG3 can complement yeast alg3 mutant","termid":"PBO:0083123"}


id: PBO:0085264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in the vacuolar membrane; VBA3 has a paralog, VBA5, that arose from a segmental duplication","termid":"PBO:0085264"}


id: GO:0150020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"basal dendrite morphogenesis","termid":"GO:0150019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite arborization","termid":"GO:0150020"}


id: GO:0101025
data:
  {"annotated_genes":["SJAG_04883","SJAG_04319","SJAG_04509","SJAG_04972","SJAG_03219","SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105985,94457,93785,89149,84047,106392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"The process in which a nuclear membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101025","terms_by_termid":{"GO:0101026":null}}


id: PBO:0057129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 212","termid":"PBO:0057129"}


id: PBO:0081626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 556","termid":"PBO:0081626"}


id: PBO:0090059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutamate-tRNA ligase Gus1","termid":"PBO:0090059"}


id: PBO:0089600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor Gdi1","termid":"PBO:0089600"}


id: PBO:0091117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial intermembrane space Cmc1","termid":"PBO:0091117"}


id: PBO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1B2, pseudogene","termid":"PBO:0043025"}


id: PBO:0081911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 878","termid":"PBO:0081911"}


id: PBO:0077078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 1","termid":"PBO:0077078"}


id: PR:O60101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglycerate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.04c","secondary_identifiers":["UniProtKB:O60101"],"synonyms":[{"name":"SPBC14F5.04c","type":"related"},{"name":"Spom972h-pgk","type":"exact"}],"termid":"PR:O60101"}


id: PBO:0073168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted and transmembrane 1","termid":"PBO:0073168"}


id: PBO:0061505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: PBO:0017800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl metalloaminopeptidase Aap1","termid":"PBO:0017800"}


id: PBO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034443"}


id: PBO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor like 1","termid":"PBO:0047588"}


id: PBO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein Nab3","termid":"PBO:0090323"}


id: PBO:0088662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic protease, yapsin family, unknown specificity Yps1","termid":"PBO:0088662"}


id: GO:0072761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to capsazepine","termid":"GO:1901594"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to capsazepine","termid":"GO:0072761"}


id: GO:0043641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"},{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"novobiocin metabolic process","secondary_identifiers":["Wikipedia:Novobiocin"],"synonyms":[{"name":"novobiocin metabolism","type":"exact"}],"termid":"GO:0043641"}


id: PBO:0054965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2379","termid":"PBO:0054965"}


id: GO:0018817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-oxohept-3-ene-1,7-dioate + H2O = 2,4-dihydroxy-hept-trans-2-ene-1,7-dioate.","definition_xrefs":["UM-BBD_reactionID:r0369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxo-hept-3-ene-1,7-dioate hydratase activity","secondary_identifiers":["MetaCyc:HYDROXYHEPTA-DIENEDIOATE-HYDROXY-RXN","RHEA:42072"],"synonyms":[{"name":"2-oxo-hepta-3-ene-1,7-dioate hydratase activity","type":"exact"},{"name":"2-oxo-hepta-3-ene-1,7-dioic acid hydratase activity","type":"exact"},{"name":"HpaH","type":"related"}],"termid":"GO:0018817"}


id: PBO:0090463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Dis3","termid":"PBO:0090463"}


id: PBO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug100","termid":"PBO:0017009"}


id: PBO:0004981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF2429 family","termid":"PBO:0004981"}


id: PBO:0054282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1673","termid":"PBO:0054282"}


id: PBO:0068780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 17, pseudogene","termid":"PBO:0068780"}


id: GO:0060445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the salivary gland is generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}


id: PBO:0049834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDHD5 antisense RNA 1","termid":"PBO:0049834"}


id: GO:0071119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha7-beta1 integrin complex bound to nicotinamide riboside kinase 2 (also known as muscle integrin binding protein, MIBP).","definition_xrefs":["PMID:12941630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha7-beta1 integrin-nicotinamide riboside kinase complex","synonyms":[{"name":"ITGA7-ITGB1-ITGB1BP3 complex","type":"narrow"}],"termid":"GO:0071119"}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: PBO:0049759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C1 regulator 1","termid":"PBO:0049759"}


id: GO:0018800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxopent-3-ene-1,2,5-tricarboxylate = 2-oxohept-3-enedioate + CO2.","definition_xrefs":["EC:4.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase activity","secondary_identifiers":["RHEA:14397","MetaCyc:4.1.1.68-RXN","UM-BBD_reactionID:r0367"],"synonyms":[{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,6-dioate decarboxylase activity","type":"related"},{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase activity","type":"exact"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase (2-oxohept-3-enedioate-forming)","type":"related"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase activity","type":"related"},{"name":"HpaG-2","type":"related"},{"name":"HpaG2","type":"related"},{"name":"OPET decarboxylase activity","type":"exact"}],"termid":"GO:0018800"}


id: PBO:0082201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 1,2-mannosyltransferase; involved in glycosyl phosphatidyl inositol (GPI) biosynthesis; required for addition of the fourth, side branching mannose to the GPI core structure","termid":"PBO:0082201"}


id: PBO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn2","termid":"PBO:0000710"}


id: GO:0060460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the left lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"left lung development","termid":"GO:0060459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung morphogenesis","termid":"GO:0060460"}


id: GO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst","termid":"GO:0060263"}


id: GO:0015680
data:
  {"annotated_genes":["SJAG_00449","SJAG_03231","SJAG_04553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98205,100778,103554],"is_not":false,"summary":null,"term":"GO:0015680"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of copper ions to a target protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_03231":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein maturation by copper ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intracellular copper delivery","type":"exact"},{"name":"intracellular copper ion delivery","type":"related"},{"name":"intracellular copper ion transport","type":"broad"}],"termid":"GO:0015680","terms_by_termid":{"GO:0015680":null}}


id: GO:0010325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose family oligosaccharides (RFOs, such as raffinose, stachyose, verbascose and other molecules with a higher degree of galactosyl polymerization).","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"raffinose family oligosaccharide biosynthetic process","synonyms":[{"name":"raffinose family oligosaccharide biosynthesis","type":"exact"}],"termid":"GO:0010325"}


id: PATO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convolute","termid":"PATO:0001966"}


id: GO:0005313
data:
  {"annotated_genes":["SJAG_03256","SJAG_00626","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92665,94326,99927],"is_not":false,"summary":null,"term":"GO:0005313"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-glutamate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5624256","RHEA:66336","Reactome:R-HSA-210444","Reactome:R-HSA-428052"],"synonyms":[{"name":"L-glutamate transporter activity","type":"broad"},{"name":"glutamate transmembrane transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0005313","terms_by_termid":{"GO:0005313":null}}


id: MOD:01791
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal phosphohistidine residue to phosphohistidine immonium ion.","definition_xrefs":["PubMed:20847263","PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phosphorylated L-histidine","termid":"MOD:00890"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01791"}


id: GO:0033513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA, via the intermediate 5-aminopentanamide.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-lysine catabolic process to acetyl-CoA via 5-aminopentanamide","synonyms":[{"name":"L-lysine breakdown to acetyl-CoA via 5-aminopentanamide","type":"exact"},{"name":"L-lysine degradation to acetyl-CoA via 5-aminopentanamide","type":"exact"}],"termid":"GO:0033513"}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: GO:0016620
data:
  {"annotated_genes":["SJAG_02235","SJAG_00674","SJAG_00660","SJAG_00869","SJAG_03903","SJAG_03293","SJAG_00027","SJAG_06622","SJAG_03828","SJAG_02961","SJAG_03786","SJAG_00234","SJAG_02945","SJAG_02135","SJAG_00482","SJAG_00636","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[75033,96948,102883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[111847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[96245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[105473,105474,105475,105020,105476,105021,105017,105018,105022,105470,105471,105019,105023,105472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[97281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[94262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[84574,83595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[83596,84575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222583","EC:1.2.1.-"],"termid":"GO:0016620","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004777":null,"GO:0036243":null}}


id: MOD:00548
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:195","PubMed:15283597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA-d0","synonyms":[{"name":"APTA-d0","type":"related"},{"name":"QAT","type":"related"}],"termid":"MOD:00548"}


id: MOD:00015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamic acid.","definition_xrefs":["RESID:AA0006","PubMed:4922541","PubMed:1881881","PubMed:6692818","PubMed:9326660","PubMed:957425","ChEBI:29972","DeltaMass:0","PubMed:4565668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid residue","synonyms":[{"name":"(2S)-2-aminopentanedioic acid","type":"exact"},{"name":"1-aminopropane-1,3-dicarboxylic acid","type":"exact"},{"name":"2-aminoglutaric acid","type":"exact"},{"name":"2-azanylpentanedioic acid","type":"exact"},{"name":"Glu","type":"exact"},{"name":"L-glutamic acid","type":"exact"},{"name":"alpha-aminoglutaric acid","type":"exact"},{"name":"glutaminic acid","type":"exact"}],"termid":"MOD:00015"}


id: FYPO:0004427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of the ribosomal small subunit protein S6 begins later than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:24247430","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","synonyms":[{"name":"delayed onset of dephosphorylation of ribosomal S6 during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of ribosomal S6 dephosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004427"}


id: GO:0007264
data:
  {"annotated_genes":["SJAG_03681","SJAG_03508","SJAG_04597","SJAG_03376","SJAG_00329","SJAG_02169","SJAG_03488","SJAG_03353","SJAG_03592","SJAG_01386","SJAG_00229","SJAG_04943","SJAG_02514","SJAG_01790","SJAG_00883","SJAG_00082","SJAG_03048","SJAG_04776","SJAG_03361","SJAG_03342","SJAG_04455","SJAG_02379","SJAG_02232","SJAG_03936","SJAG_02520","SJAG_01188","SJAG_04329","SJAG_00078","SJAG_03631","SJAG_00600","SJAG_06270","SJAG_04468","SJAG_04464","SJAG_01805","SJAG_01464","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107428],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[87831,111967,89021,88939,95672,89561,86849,91749,97353,101098,103301,95752,103611,106243],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[87271],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0046579"},{"annotations":[89912,83688,86131,106595,98470],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[101120,107081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[68925,112564],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032483"},{"annotations":[86094,100574,109437],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031029"},{"annotations":[95618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[85375,102445,83690,111530,103208,90520,103162,97024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00329":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03361":null,"SJAG_03376":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"small GTPase-mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Ras family protein signal transduction","type":"narrow"},{"name":"small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0007264","terms_by_termid":{"GO:0007266":null,"GO:0031028":null,"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0031291":null,"GO:0032483":null,"GO:0046579":null,"GO:0046580":null}}


id: GO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22128786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: PBO:0049008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gephyrin","termid":"PBO:0049008"}


id: GO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of solute translocation in which two solutes equilibrate across an osmotic barrier, and the translocation of one solute is coupled to the translocation of the other in the same direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete symport (obsolete GO:0015983)","synonyms":[{"name":"symport","type":"exact"}],"termid":"GO:0015983"}


id: PBO:0061262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 pseudogene 1","termid":"PBO:0061262"}


id: GO:0008638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Covalent addition of a specific tagging molecule to a protein, targeting the tagged protein for some fate e.g. degradation.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tagging activity (obsolete GO:0008638)","synonyms":[{"name":"protein tagging activity","type":"exact"}],"termid":"GO:0008638"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: PBO:0046915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member B","termid":"PBO:0046915"}


id: GO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"positively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult salivary gland boundary specification","synonyms":[{"name":"activation of adult salivary gland determination","type":"narrow"},{"name":"positive regulation of adult salivary gland determination","type":"exact"},{"name":"stimulation of adult salivary gland determination","type":"narrow"},{"name":"up regulation of adult salivary gland determination","type":"exact"},{"name":"up-regulation of adult salivary gland determination","type":"exact"},{"name":"upregulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045711"}


id: GO:0061449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an olfactory bulb tufted cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb tufted cell development","termid":"GO:0061449"}


id: PBO:0040472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR interacting protein","termid":"PBO:0040472"}


id: GO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The invasion by a symbiont of a host organism cell by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete entry of symbiont into host cell by promotion of host phagocytosis (obsolete GO:0052066)","synonyms":[{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction","type":"related"},{"name":"entry of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of symbiont into host cell by promotion of host phagocytosis","type":"exact"}],"termid":"GO:0052066"}


id: PBO:0056936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-1","termid":"PBO:0056936"}


id: PBO:0077187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 10","termid":"PBO:0077187"}


id: GO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate specification","termid":"GO:0048665"}


id: PBO:0056939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR7-3 host gene","termid":"PBO:0056939"}


id: PBO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62 C-terminal like","termid":"PBO:0061675"}


id: FYPO:0001733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body separation is abnormal. Spindle pole body separation is the process in which duplicated spindle pole bodies detach and migrate apart within the nuclear membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body organization","termid":"FYPO:0006387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0000054","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body separation","synonyms":[{"name":"abnormal mitotic SPB separation","type":"exact"},{"name":"abnormal spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body separation during vegetative growth","type":"exact"}],"termid":"FYPO:0001733"}


id: PR:O14295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- plr1 gene.","definition_xrefs":["UniProtKB:O14295","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.11","synonyms":[{"name":"PL reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PL-red (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-plr1","type":"exact"}],"termid":"PR:O14295"}


id: PBO:0060029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 17","termid":"PBO:0060029"}


id: GO:0036507
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of one or more mannose residues from a mannosylated protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation","termid":"GO:0006517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein demannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein de-mannosylation","type":"exact"}],"termid":"GO:0036507","terms_by_termid":{"GO:1904380":null}}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: MOD:01737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated N-terminal","termid":"MOD:01718"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01737"}


id: PBO:0089690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCP1 homology domain, HAD hydrolase superfamily","termid":"PBO:0089690"}


id: PBO:0062280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily I member 1","termid":"PBO:0062280"}


id: PBO:0073053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCY1 like pseudokinase 1","termid":"PBO:0073053"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: GO:0003984
data:
  {"annotated_genes":["SJAG_03985"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109325],"is_not":false,"summary":null,"term":"GO:0003984"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 pyruvate = 2-acetolactate + CO2.","definition_xrefs":["RHEA:25249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016744","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acetolactate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.2.1.6","MetaCyc:ACETOLACTSYN-RXN"],"synonyms":[{"name":"acetohydroxy acid synthetase activity","type":"related"},{"name":"acetohydroxyacid synthase activity","type":"related"},{"name":"acetolactate pyruvate-lyase (carboxylating) activity","type":"related"},{"name":"acetolactic synthetase activity","type":"related"},{"name":"alpha-acetohydroxy acid synthetase activity","type":"related"},{"name":"alpha-acetohydroxyacid synthase activity","type":"related"},{"name":"alpha-acetolactate synthase activity","type":"related"},{"name":"alpha-acetolactate synthetase activity","type":"related"},{"name":"pyruvate:pyruvate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0003984","terms_by_termid":{"GO:0003984":null}}


id: PBO:0074688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 68","termid":"PBO:0074688"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: PBO:0048583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 7","termid":"PBO:0048583"}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14739239","RHEA:41740","PMID:20483913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0140101","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: PR:P46960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A geranylgeranyl transferase type-2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11774:SF5","OMA:SCHPO00626","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl transferase type-2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.02","secondary_identifiers":["UniProtKB:P46960"],"synonyms":[{"name":"GGTase-II-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RABGGTB","type":"exact"},{"name":"geranylgeranyl transferase type II subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein geranyl-geranyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46960"}


id: PBO:0069656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 933, pseudogene","termid":"PBO:0069656"}


id: GO:0071840
data:
  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