# terms

id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: GO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-abscisic aldehyde + H2O + O2 = abscisate + H2O2 + H+.","definition_xrefs":["EC:1.2.3.14","RHEA:20529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"abscisic aldehyde oxidase activity","secondary_identifiers":["GO:0033725","KEGG_REACTION:R06957","MetaCyc:1.2.3.14-RXN"],"synonyms":[{"name":"AAO3","type":"related"},{"name":"AOdelta","type":"related"},{"name":"abscisic-aldehyde oxidase activity","type":"related"},{"name":"abscisic-aldehyde:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0010293"}


id: PBO:0036069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_polymerization","termid":"PBO:0036069"}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: FYPO:0001687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing benomyl.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on benomyl","synonyms":[{"name":"normal cell population growth in presence of benomyl","type":"exact"},{"name":"normal cell population growth on benomyl","type":"exact"},{"name":"normal cell population growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal cellular response to benomyl","type":"related"},{"name":"normal growth on methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"normal vegetative cell population growth on benomyl","type":"exact"}],"termid":"FYPO:0001687"}


id: GO:0043365
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dihydroflavodoxin + [formate C-acetyltransferase]-glycine = 5'-deoxyadenosine + L-methionine + flavodoxin semiquinone + [formate C-acetyltransferase]-glycin-2-yl radical.","definition_xrefs":["EC:1.97.1.4","GOC:jl","PMID:18307109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-radical enzyme activating activity","termid":"GO:0043364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"[formate-C-acetyltransferase]-activating enzyme activity","secondary_identifiers":["GO:0008862","MetaCyc:TDCEACT-RXN","RHEA:19225"],"synonyms":[{"name":"PFL activase activity","type":"related"},{"name":"PFL-glycine:S-adenosyl-L-methionine H transferase (flavodoxin-oxidizing, S-adenosyl-L-methionine-cleaving) activity","type":"related"},{"name":"[pyruvate formate-lyase]-activating enzyme activity","type":"related"},{"name":"formate C-acetyltransferase-glycine dihydroflavodoxin:S-adenosyl-L-methionine oxidoreductase (S-adenosyl-L-methionine cleaving)","type":"related"},{"name":"formate acetyltransferase activating enzyme activity","type":"related"},{"name":"formate acetyltransferase-glycine dihydroflavodoxin:S-adenosyl-L-methionine oxidoreductase (S-adenosyl-L-methionine cleaving) activity","type":"related"},{"name":"formate-C-acetyltransferase-activating enzyme","type":"related"},{"name":"pyruvate formate-lyase-activating enzyme","type":"related"}],"termid":"GO:0043365"}


id: PBO:0038936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (class II), pi polypeptide","termid":"PBO:0038936"}


id: PBO:0075268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 21","termid":"PBO:0075268"}


id: PBO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytoplasmic_protein_level_during_vegetative_growth","termid":"PBO:0030996"}


id: PBO:0080272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 35 pseudogene","termid":"PBO:0080272"}


id: GO:1900496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:1900494"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA biosynthetic process from acetyl-CoA","termid":"GO:0044579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006629","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA","synonyms":[{"name":"activation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"activation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"narrow"},{"name":"positive regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"up-regulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthesis from acetyl-CoA","type":"exact"},{"name":"upregulation of butyryl-CoA biosynthetic process from acetyl-CoA","type":"exact"}],"termid":"GO:1900496"}


id: GO:0009290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of DNA into a cell that contributes to the process of transformation, the uptake of foreign genetic material into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transport","termid":"GO:0051027"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"part_of","term_name":"DNA-mediated transformation","termid":"GO:0009294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"DNA import into cell involved in transformation","synonyms":[{"name":"DNA import into cell","type":"broad"},{"name":"DNA transport into cell during transformation","type":"related"},{"name":"cellular DNA import during transformation","type":"related"},{"name":"cellular DNA uptake","type":"broad"}],"termid":"GO:0009290"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["PMID:22366062","Wikipedia:Gap_junction","GOC:mtg_muscle","ISBN:0815332181","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: PBO:0074838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32A","termid":"PBO:0074838"}


id: PBO:0068920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 163, pseudogene","termid":"PBO:0068920"}


id: PBO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2C subunit","termid":"PBO:0002262"}


id: GO:0046080
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dUTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUTP metabolism","type":"exact"}],"termid":"GO:0046080","terms_by_termid":{"GO:0046081":null}}


id: PBO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear telomere cap complex subunit Ten1","termid":"PBO:0005292"}


id: GO:0031986
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which protein is stored.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"proteinoplast","secondary_identifiers":["Wikipedia:Proteinoplast"],"termid":"GO:0031986"}


id: PBO:0064121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 1, transient receptor potential cation channel","termid":"PBO:0064121"}


id: PBO:0080017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 3","termid":"PBO:0080017"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: PBO:0062447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 111 pseudogene","termid":"PBO:0062447"}


id: PBO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain","termid":"PBO:0005425"}


id: PATO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flavor quality inhering in a bearer by virtue of the bearer's having an acrid, sharp, or disagreeable flavor.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavourful","termid":"PATO:0001329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bitter","termid":"PATO:0002474"}


id: PBO:0071174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 15","termid":"PBO:0071174"}


id: PBO:0080475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault RNA 1-1","termid":"PBO:0080475"}


id: GO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: allantoin(out) + H+(out) = allantoin(in) + H+(in) by secondary active transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:2.A.39.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"allantoin:proton symporter activity","secondary_identifiers":["GO:0015206"],"synonyms":[{"name":"allantoin permease activity","type":"related"},{"name":"allantoin uptake transmembrane transporter activity","type":"narrow"},{"name":"allantoin/allantoate transporter","type":"broad"}],"termid":"GO:0005274"}


id: GO:0099176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by a trans-synaptic complex.","definition_xrefs":["GOC:dos","PMID:23209303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by trans-synaptic protein complex","synonyms":[{"name":"regulation of trans-synaptic complex mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:0099176"}


id: PBO:0064891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bdelta pseudogene 1","termid":"PBO:0064891"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: GO:1901245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell receptor (BCR) from the plasma membrane to the inside of the cell, which results in positive regulation of toll-like receptor 9 (TLR9) signaling. For example, internalized BCR signals to recruit TLR9 from multiple small endosomes to large autophagosome-like compartments to enhance TLR9 signaling.","definition_xrefs":["GOC:bf","PMID:18513998","GOC:amm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor 9 signaling pathway","termid":"GO:0034165"},{"relation_name":"is_a","term_name":"B cell receptor internalization","termid":"GO:0036300"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 9 signaling pathway by B cell receptor internalization","synonyms":[{"name":"BCR-induced TLR9 recruitment","type":"narrow"},{"name":"positive regulation of TLR9 signaling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR receptor internalization","type":"exact"}],"termid":"GO:1901245"}


id: PBO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 129","termid":"PBO:0075079"}


id: _global:molecularly_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"_global:interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecularly_interacts_with","secondary_identifiers":["RO:0002436"],"termid":"_global:molecularly_interacts_with"}


id: FYPO:0005945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal truncation that would result in the loss of one of two different alleles of a gene occurs at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PMID:19798055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal frequency of break-induced loss of heterozygosity","termid":"FYPO:0005945"}


id: FYPO:0004290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased microsatellite DNA binding","synonyms":[{"name":"decreased microsatellite repeat binding","type":"exact"},{"name":"reduced microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004290"}


id: GO:1903432
data:
  {"annotated_genes":["SJAG_03799","SJAG_04910","SJAG_05184","SJAG_05346","SJAG_00561","SJAG_00457","SJAG_00169","SJAG_01142","SJAG_03089","SJAG_03501","SJAG_03928","SJAG_01184","SJAG_03678","SJAG_03720","SJAG_04249","SJAG_00991","SJAG_02765","SJAG_00209","SJAG_03371","SJAG_00875","SJAG_03486","SJAG_02605","SJAG_03405","SJAG_03072","SJAG_00824","SJAG_01983","SJAG_03355","SJAG_01187","SJAG_04235","SJAG_02231","SJAG_01032","SJAG_04496","SJAG_00688","SJAG_02424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88989,90164,101194,103919,111538,113833],"is_not":false,"summary":null,"term":"GO:1903432"},{"annotations":[89423,84176,99095,103215,103467,90275,105750,107025,112197,110052,112300,92203,112548,114252,105336,109229,110641,97528,95655,113098,101192,94964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[85554,106612,90422,105337,114392,108927,84177,84467,94108,103216,92204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1903432","terms_by_termid":{"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: FYPO:0005557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is decreased during the mitotic cell cycle. Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["GO:0061781","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic cohesin unloading","synonyms":[{"name":"decreased cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin unloading during vegetative growth","type":"exact"},{"name":"reduced cohesin unloading","type":"exact"}],"termid":"FYPO:0005557"}


id: MOD:00783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-arginine residue with two methyl groups.","definition_xrefs":["Unimod:36#R","OMSSA:37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"methylated arginine","termid":"MOD:00658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"dimethylated L-arginine","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"NNMe2Arg","type":"exact"},{"name":"dimethylr","type":"exact"}],"termid":"MOD:00783"}


id: GO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxymethoxysuccinate = fumarate + glycolate.","definition_xrefs":["RHEA:12336","EC:4.2.99.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carboxymethyloxysuccinate lyase activity","secondary_identifiers":["MetaCyc:CARBOXYMETHYLOXYSUCCINATE-LYASE-RXN","KEGG_REACTION:R01336"],"synonyms":[{"name":"carboxymethyloxysuccinate glycolate-lyase (fumarate-forming)","type":"related"},{"name":"carboxymethyloxysuccinate glycolate-lyase activity","type":"related"}],"termid":"GO:0047772"}


id: GO:0047376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinyl palmitate + H2O = all-trans-retinol + H+ + palmitate.","definition_xrefs":["RHEA:13933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinyl-palmitate esterase activity","termid":"GO:0050253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity","secondary_identifiers":["MetaCyc:3.1.1.64-RXN","Reactome:R-HSA-2429643","Reactome:R-HSA-2404140","KEGG_REACTION:R02368"],"synonyms":[{"name":"all-trans-retinyl-palmitate acylhydrolase activity","type":"broad"},{"name":"all-trans-retinyl-palmitate hydrolase activity","type":"broad"},{"name":"retinyl-palmitate palmitohydrolase activity","type":"broad"}],"termid":"GO:0047376"}


id: GO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoamide, the functional form of lipoic acid in which the carboxyl group is attached to protein by an amide linkage to a lysine amino group.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoamide binding","termid":"GO:0043544"}


id: GO:0070296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ions (Ca2+) into, out of or within the sarcoplasmic reticulum.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"}


id: PBO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300c molecule","termid":"PBO:0042386"}


id: PBO:0084674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial arginyl-tRNA synthetase; mutations in human ortholog are associated with pontocerebellar hypoplasia type 6; MSR1 has a paralog, YDR341C, that arose from the whole genome duplication","termid":"PBO:0084674"}


id: PBO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18","termid":"PBO:0072201"}


id: PBO:0091061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Pol5","termid":"PBO:0091061"}


id: PBO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-associated factor Raf1","termid":"PBO:0005003"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: PBO:0064511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J3","termid":"PBO:0064511"}


id: GO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the lens is maintained in a highly refractive, transparent state to allow for optimal focusing of light on the retina.","definition_xrefs":["PMID:22095752","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of lens transparency","synonyms":[{"name":"maintenance of ocular lens transparency","type":"exact"},{"name":"preservation of lens transparency","type":"exact"}],"termid":"GO:0036438"}


id: PBO:0034248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_orthology_relationship_with","termid":"PBO:0034248"}


id: PBO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citron rho-interacting serine/threonine kinase","termid":"PBO:0043186"}


id: GO:0038084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding its receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF signaling","type":"exact"},{"name":"VEGF-activated signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038084"}


id: PBO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing","termid":"PBO:0035727"}


id: PBO:0071409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 15","termid":"PBO:0071409"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: PBO:0039425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 5","termid":"PBO:0039425"}


id: FYPO:0000812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GO:0007033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal vacuole organization","termid":"FYPO:0002803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole organization during vegetative growth","synonyms":[{"name":"abnormal vacuolar organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuolar organization during vegetative growth","type":"exact"},{"name":"abnormal vacuole organisation during vegetative growth","type":"exact"},{"name":"abnormal vacuole organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000812"}


id: PBO:0068479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 58, pseudogene","termid":"PBO:0068479"}


id: GO:0045756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of initiation of acetate catabolic process by acetate","termid":"GO:0045147"},{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"},{"relation_name":"is_a","term_name":"positive regulation of response to acetate","termid":"GO:1901459"},{"relation_name":"positively_regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"activation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"positive regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"positive regulation of initiation of acetate degradation by acetate","type":"exact"},{"name":"stimulation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"up regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"up-regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"upregulation of initiation of acetate catabolic process by acetate","type":"exact"}],"termid":"GO:0045756"}


id: PBO:0055343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2771","termid":"PBO:0055343"}


id: GO:0039638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a lipopolysaccharide (LPS) on the host cell surface.","definition_xrefs":["GOC:bf","GOC:bm","PMID:12837775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion attachment to host cell","termid":"GO:0019062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide-mediated virion attachment to host cell","synonyms":[{"name":"LPS binding involved in viral attachment to host cell","type":"exact"},{"name":"lipopolysaccharide binding involved in viral attachment to host cell","type":"exact"},{"name":"virion attachment, binding to host lipopolysaccharide","type":"exact"}],"termid":"GO:0039638"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: PBO:0044761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43 pseudogene 2","termid":"PBO:0044761"}


id: PBO:0058352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4725","termid":"PBO:0058352"}


id: FYPO:0007480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the subtelomeric region of the chromosome than normal.","definition_xrefs":["PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spatial extent of heterochromatin assembly","termid":"FYPO:0005849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased spatial extent of subtelomeric heterochromatin assembly","synonyms":[{"name":"decreased spatial extent of heterochromatin assembly at subtelomere","type":"exact"},{"name":"decreased spatial extent of subtelomeric heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of subtelomeric heterochromatin assembly during vegetative growth","type":"exact"},{"name":"decreased spatial extent of subtelomeric heterochromatin formation","type":"exact"},{"name":"decreased spatial extent of telomeric heterochromatin assembly","type":"related"},{"name":"reduced spatial extent of subtelomeric heterochromatin assembly","type":"exact"}],"termid":"FYPO:0007480"}


id: PBO:0055525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2959","termid":"PBO:0055525"}


id: PBO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic centromere-SPB clustering protein Csi1","termid":"PBO:0034788"}


id: FYPO:0004751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of G418 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to G418","synonyms":[{"name":"resistance to G418 during mitotic cell cycle","type":"related"},{"name":"resistance to G418 during vegetative growth","type":"exact"},{"name":"resistance to Geneticin","type":"exact"},{"name":"resistant to G418","type":"exact"}],"termid":"FYPO:0004751"}


id: GO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a basophil.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil mediated immunity","termid":"GO:0002560"}


id: GO:0008921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,6 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide-1,6-galactosyltransferase activity","synonyms":[{"name":"LPS-1,6-galactosyltransferase activity","type":"exact"}],"termid":"GO:0008921"}


id: GO:0007429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary branching, open tracheal system","synonyms":[{"name":"secondary tracheal branching","type":"exact"}],"termid":"GO:0007429"}


id: PBO:0044391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 8","termid":"PBO:0044391"}


id: PATO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to shrink or contract.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractility","termid":"PATO:0001579"}


id: PBO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 family","termid":"PBO:0000413"}


id: PBO:0062769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily W member 1","termid":"PBO:0062769"}


id: PBO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2 (predicted)","termid":"PBO:0000990"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: FYPO:0004036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thioredoxin-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal thioredoxin-disulfide reductase activity","termid":"FYPO:0004035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0005447","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased thioredoxin-disulfide reductase activity","termid":"FYPO:0004036"}


id: PBO:0035941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules_during_mitotic_interphase","termid":"PBO:0035941"}


id: PBO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 21","termid":"PBO:0047570"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:23117617","PMID:22582262","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: GO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamate by a cell, in which the glutamate acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"glutamate secretion","termid":"GO:0014047"},{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"part_of","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}


id: PBO:0108625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1102/ mitochondrial ribosome assembly protein Rsm2202, fusion protein","termid":"PBO:0108625"}


id: PBO:0058222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4512","termid":"PBO:0058222"}


id: PBO:0041169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3 pseudogene 1","termid":"PBO:0041169"}


id: PBO:0030572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_phenylalanine_level","termid":"PBO:0030572"}


id: GO:1903007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lys63-specific deubiquitinase activity.","definition_xrefs":["GOC:TermGenie","PMID:22970133","GOC:bf","GOC:PARL","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"positive regulation of protein K63-linked deubiquitination","termid":"GO:1903006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of Lys63-specific deubiquitinase activity","synonyms":[{"name":"activation of Lys63-specific deubiquitinase activity","type":"narrow"},{"name":"up regulation of Lys63-specific deubiquitinase activity","type":"exact"},{"name":"up-regulation of Lys63-specific deubiquitinase activity","type":"exact"},{"name":"upregulation of Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"GO:1903007"}


id: PBO:0028887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_intergenic_transcription","termid":"PBO:0028887"}


id: GO:0033702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,5S)-carveol + NAD+ = (S)-carvone + H+ + NADH.","definition_xrefs":["EC:1.1.1.275","RHEA:14825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-trans-carveol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R06117","MetaCyc:RXN-9397"],"synonyms":[{"name":"(+)-trans-carveol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0033702"}


id: GO:0044693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: trehalose(out) + H+(out) = trehalose(in) + H+(in).","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"trehalose:proton symporter activity","synonyms":[{"name":"trehalose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0044693"}


id: GO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a primary amine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"primary amine secretion","termid":"GO:0061531"}


id: PBO:0045460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein pseudogene 1","termid":"PBO:0045460"}


id: PBO:0077191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 2","termid":"PBO:0077191"}


id: GO:0018026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.","definition_xrefs":["RESID:AA0076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine monomethylation","termid":"GO:0018026"}


id: GO:0004496
data:
  {"annotated_genes":["SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84851],"is_not":false,"summary":null,"term":"GO:0004496"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.36","RHEA:17065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"mevalonate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02245","MetaCyc:MEVALONATE-KINASE-RXN","Reactome:R-HSA-191380"],"synonyms":[{"name":"ATP:(R)-mevalonate 5-phosphotransferase activity","type":"related"},{"name":"ATP:mevalonate 5-phosphotransferase activity","type":"related"},{"name":"MVA kinase activity","type":"related"},{"name":"mevalonate 5-phosphotransferase activity","type":"related"},{"name":"mevalonate kinase (phosphorylating)","type":"related"},{"name":"mevalonate phosphokinase activity","type":"related"},{"name":"mevalonic acid kinase activity","type":"related"},{"name":"mevalonic kinase activity","type":"related"}],"termid":"GO:0004496","terms_by_termid":{"GO:0004496":null}}


id: PBO:0064297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 5","termid":"PBO:0064297"}


id: PBO:0026750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_nitrogen_starvation","termid":"PBO:0026750"}


id: PR:O74761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA primase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03657","PRO:DNx","PANTHER:PTHR10537:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.06","secondary_identifiers":["UniProtKB:O74761"],"synonyms":[{"name":"Spom972h-PRIM2","type":"exact"}],"termid":"PR:O74761"}


id: PBO:0016552
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by Drosophila U2af50","termid":"PBO:0016552"}


id: GO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"ocellus pigment biosynthetic process","termid":"GO:0008055"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ommochrome biosynthetic process","synonyms":[{"name":"ommochrome anabolism","type":"exact"},{"name":"ommochrome biosynthesis","type":"exact"},{"name":"ommochrome formation","type":"exact"},{"name":"ommochrome synthesis","type":"exact"}],"termid":"GO:0006727"}


id: PBO:0068051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 356","termid":"PBO:0068051"}


id: GO:0036115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["PMID:10578051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"ribonucleoside bisphosphate catabolic process","termid":"GO:0034031"},{"relation_name":"is_a","term_name":"purine nucleoside bisphosphate catabolic process","termid":"GO:0034034"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044248","GO:0044281","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"fatty-acyl-CoA catabolic process","synonyms":[{"name":"fatty-acyl-CoA breakdown","type":"exact"},{"name":"fatty-acyl-CoA catabolism","type":"exact"},{"name":"fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036115"}


id: PBO:0013104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP Sap62","termid":"PBO:0013104"}


id: PBO:0081298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 79","termid":"PBO:0081298"}


id: PBO:0067740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 39","termid":"PBO:0067740"}


id: PBO:0073030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 3","termid":"PBO:0073030"}


id: GO:0035623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which glucose is taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["PMID:11269503","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"},{"relation_name":"is_a","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"renal glucose absorption","synonyms":[{"name":"glucose reabsorption","type":"exact"},{"name":"nephron glucose absorption","type":"exact"}],"termid":"GO:0035623"}


id: PBO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_at_low_temperature","termid":"PBO:0031350"}


id: PATO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000907 f2 fertile (obsolete PATO:0000907)","termid":"PATO:0000907"}


id: PR:Q9P7E9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C14C4.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.15c","synonyms":[{"name":"Spom972h-SPAC14C4.15c","type":"exact"}],"termid":"PR:Q9P7E9"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitylation","type":"exact"},{"name":"histone deubiquitinylation","type":"exact"}],"termid":"GO:0016578"}


id: GO:0061112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of bud outgrowth involved in lung branching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"},{"relation_name":"negatively_regulates","term_name":"bud outgrowth involved in lung branching","termid":"GO:0060447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bud outgrowth involved in lung branching","termid":"GO:0061112"}


id: GO:1902499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein autoubiquitination.","definition_xrefs":["GOC:rb","PMID:24069405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"regulation of protein autoubiquitination","termid":"GO:1902498"},{"relation_name":"positively_regulates","term_name":"protein autoubiquitination","termid":"GO:0051865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein autoubiquitination","synonyms":[{"name":"activation of protein auto-ubiquitination","type":"narrow"},{"name":"activation of protein auto-ubiquitinylation","type":"narrow"},{"name":"activation of protein autoubiquitination","type":"narrow"},{"name":"activation of protein autoubiquitinylation","type":"narrow"},{"name":"activation of protein self-ubiquitination","type":"narrow"},{"name":"activation of protein self-ubiquitinylation","type":"narrow"},{"name":"positive regulation of protein auto-ubiquitination","type":"exact"},{"name":"positive regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"positive regulation of protein autoubiquitinylation","type":"exact"},{"name":"positive regulation of protein self-ubiquitination","type":"exact"},{"name":"positive regulation of protein self-ubiquitinylation","type":"exact"},{"name":"up regulation of protein auto-ubiquitination","type":"exact"},{"name":"up regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"up regulation of protein autoubiquitination","type":"exact"},{"name":"up regulation of protein autoubiquitinylation","type":"exact"},{"name":"up regulation of protein self-ubiquitination","type":"exact"},{"name":"up regulation of protein self-ubiquitinylation","type":"exact"},{"name":"up-regulation of protein auto-ubiquitination","type":"exact"},{"name":"up-regulation of protein auto-ubiquitinylation","type":"exact"},{"name":"up-regulation of protein autoubiquitination","type":"exact"},{"name":"up-regulation of protein autoubiquitinylation","type":"exact"},{"name":"up-regulation of protein self-ubiquitination","type":"exact"},{"name":"up-regulation of protein self-ubiquitinylation","type":"exact"},{"name":"upregulation of protein auto-ubiquitination","type":"exact"},{"name":"upregulation of protein auto-ubiquitinylation","type":"exact"},{"name":"upregulation of protein autoubiquitination","type":"exact"},{"name":"upregulation of protein autoubiquitinylation","type":"exact"},{"name":"upregulation of protein self-ubiquitination","type":"exact"},{"name":"upregulation of protein self-ubiquitinylation","type":"exact"}],"termid":"GO:1902499"}


id: GO:0016888
data:
  {"annotated_genes":["SJAG_04183","SJAG_01173","SJAG_01832","SJAG_05237","SJAG_01648","SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84548,100243,103831,93230,97251,99287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016893"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.21.-","Reactome:R-HSA-912368"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016888","terms_by_termid":{"GO:0017108":null}}


id: GO:2000429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil aggregation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"is_a","term_name":"regulation of neutrophil aggregation","termid":"GO:2000428"},{"relation_name":"negatively_regulates","term_name":"neutrophil aggregation","termid":"GO:0070488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil aggregation","synonyms":[{"name":"negative regulation of neutrocyte aggregation","type":"exact"},{"name":"negative regulation of neutrophil leucocyte aggregation","type":"exact"},{"name":"negative regulation of neutrophilic leukocyte aggregation","type":"exact"}],"termid":"GO:2000429"}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160","EC:5.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["KEGG_REACTION:R02437","MetaCyc:RHAMNISOM-RXN"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1 (predicted)","termid":"PBO:0004153"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: GO:0080104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopropyl-glucosinolate = 5-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-methylthiopropyl glucosinolate S-oxygenase activity","termid":"GO:0080104"}


id: PBO:0047206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 219 member B","termid":"PBO:0047206"}


id: GO:0008815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = acetate + oxaloacetate.","definition_xrefs":["RHEA:10760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"citrate (pro-3S)-lyase activity","secondary_identifiers":["EC:4.1.3.6","KEGG_REACTION:R00362","MetaCyc:CITLY-RXN"],"synonyms":[{"name":"citrase activity","type":"related"},{"name":"citratase activity","type":"related"},{"name":"citrate aldolase activity","type":"related"},{"name":"citrate lyase","type":"narrow"},{"name":"citrate lyase activity","type":"exact"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COO-->acetate]","type":"related"},{"name":"citrate oxaloacetate-lyase activity","type":"related"},{"name":"citric aldolase activity","type":"related"},{"name":"citridesmolase activity","type":"related"},{"name":"citritase activity","type":"related"}],"termid":"GO:0008815"}


id: PBO:0084098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) that modulates Rho1p activity; involved in the cell integrity signaling pathway; interacts with Rgl1p; localization of Tus1p to the bed neck is regulated by Rgl1p; multicopy suppressor of tor2 mutation and ypk1 ypk2 double mutation; potential Cdc28p substrate","termid":"PBO:0084098"}


id: PBO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ATP2","termid":"PBO:0000694"}


id: GO:1902862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glycerol to glycerone phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910","GO_REF:0000093","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerol catabolic process to glycerone phosphate (obsolete GO:1902862)","synonyms":[{"name":"glycerol breakdown to glycerone phosphate","type":"exact"},{"name":"glycerol catabolic process to glycerone phosphate","type":"exact"},{"name":"glycerol catabolism to glycerone phosphate","type":"exact"},{"name":"glycerol degradation to glycerone phosphate","type":"exact"}],"termid":"GO:1902862"}


id: PBO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin D","termid":"PBO:0044195"}


id: PBO:0109094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOP6B like initiator of meiotic double strand breaks","termid":"PBO:0109094"}


id: SO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: PBO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein (predicted)","termid":"PBO:0005850"}


id: FYECO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which pantothenate was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited pantothenate","termid":"FYECO:0000189"}


id: GO:0051767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nitric-oxide synthase, an enzyme which catalyzes the reaction L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+.","definition_xrefs":["EC:1.14.13.39","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051768"],"synonyms":[{"name":"NO synthase biosynthesis","type":"exact"},{"name":"NO synthase biosynthetic process","type":"exact"},{"name":"NOS biosynthesis","type":"exact"},{"name":"NOS biosynthetic process","type":"exact"},{"name":"NOS1 biosynthesis","type":"narrow"},{"name":"NOS2 biosynthesis","type":"narrow"},{"name":"NOS2 synthase biosynthesis","type":"narrow"},{"name":"NOS2 synthase biosynthetic process","type":"narrow"},{"name":"NOS3 biosynthesis","type":"narrow"},{"name":"brain nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"endothelial nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"inducible nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase-1 biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase-2 biosynthetic process","type":"narrow"},{"name":"nitric-oxide synthase-3 biosynthetic process","type":"narrow"}],"termid":"GO:0051767"}


id: PBO:0048795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1 antisense RNA 1","termid":"PBO:0048795"}


id: FYPO:0006154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pheromone response mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pheromone response genes are normally transcribed in response to a pheromone stimulus.","definition_xrefs":["PomBase:mah","PMID:22900017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of pheromone response gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pheromone response gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pheromone response gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pheromone response gene transcripts during vegetative growth","type":"exact"},{"name":"increased pheromone response gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006154"}


id: PBO:0040577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B9 domain containing 2","termid":"PBO:0040577"}


id: GO:1903581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10880837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of basophil degranulation","termid":"GO:1903581"}


id: GO:0034667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha3 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha3-beta1 complex","synonyms":[{"name":"ITGA3-ITGB1 complex","type":"narrow"},{"name":"VLA-3 complex","type":"exact"},{"name":"alpha3-beta1 integrin complex","type":"exact"}],"termid":"GO:0034667"}


id: PBO:0058826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8056","termid":"PBO:0058826"}


id: FYPO:0000105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclosporin A. Cells stop growing (and may die) at a concentration of cyclosporin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cyclosporin A","synonyms":[{"name":"hypersensitive to cyclosporin A","type":"exact"},{"name":"sensitive to cyclosporin A during mitotic cell cycle","type":"related"},{"name":"sensitive to cyclosporin A during vegetative growth","type":"exact"},{"name":"sensitive to cyclosporine","type":"exact"}],"termid":"FYPO:0000105"}


id: PBO:0044041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 13","termid":"PBO:0044041"}


id: PBO:0076834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: PBO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GDP_binding","termid":"PBO:0030534"}


id: GO:1902267
data:
  {"annotated_genes":["SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102449],"is_not":false,"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902267","terms_by_termid":{"GO:1902267":null}}


id: PBO:0077978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 1-1","termid":"PBO:0077978"}


id: PBO:0049957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 3","termid":"PBO:0049957"}


id: PBO:0083759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential helicase component of heterohexameric MCM2-7 complexes; MCM2-7 complexes bind pre-replication complexes on DNA and melt DNA prior to replication; forms an Mcm4p-6p-7p subcomplex; shows nuclear accumulation in G1; homolog of S. pombe Cdc21p","termid":"PBO:0083759"}


id: PATO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a teardrop.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulbous","synonyms":[{"name":" bulblike","type":"exact"},{"name":"bulb-shaped","type":"exact"},{"name":"swollen","type":"related"}],"termid":"PATO:0002210"}


id: PBO:0065919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit beta","termid":"PBO:0065919"}


id: PR:O94570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A valine--pyruvate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02405","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C1773.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.13","secondary_identifiers":["UniProtKB:O94570"],"synonyms":[{"name":"Spom972h-avtA","type":"exact"}],"termid":"PR:O94570"}


id: GO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the terminal amino-methylene groups of peptidyl-L-lysine or peptidyl-5-hydroxy-L-lysine to aldehyde groups to form allysine or hydroxyallysine residues, respectively; these are intermediates in the formation of covalent cross-links between adjacent polypeptide chains in proteins such as collagens.","definition_xrefs":["ISBN:0198547684","RESID:AA0121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine oxidation","termid":"GO:0018057"}


id: PBO:0047225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 228 member A","termid":"PBO:0047225"}


id: PBO:0058595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6727","termid":"PBO:0058595"}


id: PBO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_from","termid":"PBO:0034072"}


id: PBO:0085921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; identical to Pau6p","termid":"PBO:0085921"}


id: PATO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (generic)","termid":"PATO:0001730"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: GO:0099509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"},{"relation_name":"is_a","term_name":"neuron cellular homeostasis","termid":"GO:0070050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099509"}


id: PBO:0031651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_re-entry_into_mitotic_cell_cycle_after_pheromone_arrest","termid":"PBO:0031651"}


id: PR:O94722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr4 gene.","definition_xrefs":["UniProtKB:O94722","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.10","synonyms":[{"name":"Spom972h-ctr4","type":"exact"},{"name":"copper transporter 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94722"}


id: GO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GOC:cls","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"}


id: GO:0042272
data:
  {"annotated_genes":["SJAG_00178","SJAG_04721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97469,101802],"is_not":false,"summary":null,"term":"GO:0042272"}]},"cv_name":"cellular_component","definition":"A protein complex that contains two proteins (know in several organisms, including Drosophila, as NXF1 and NXF2) and is required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm.","definition_xrefs":["PMID:11780633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_04721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear RNA export factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mex67-Mtr2 complex","type":"exact"},{"name":"NXF1-NXT1 complex","type":"exact"},{"name":"TAP-p15 complex","type":"exact"}],"termid":"GO:0042272","terms_by_termid":{"GO:0042272":null}}


id: PBO:0075809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 2","termid":"PBO:0075809"}


id: GO:0106422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Zeaxanthin + O2 = (3R)-11-cis-3-hydroxyretinal + (3R)-all-trans-3-hydroxyretinal.","definition_xrefs":["PMID:19020100","PMID:19889630","RHEA:33931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carotenoid isomerooxygenase activity","secondary_identifiers":["EC:1.13.11.65"],"termid":"GO:0106422"}


id: GO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by post-translational N-methylation of the pilin monomers.","definition_xrefs":["PMID:28496159","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type IV pilus","synonyms":[{"name":"TFP","type":"exact"},{"name":"type 4 pilus","type":"exact"},{"name":"type IV fimbriae","type":"exact"}],"termid":"GO:0044096"}


id: PBO:0108923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRNT1 pseudogene 1","termid":"PBO:0108923"}


id: GO:0120208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Telodendria are projections that originate from the axon pedicle and form gap junctions with other neurons.","definition_xrefs":["GOC:cvs","PMID:451992","GOC:krc","PMID:14755521","PMID:20533354","PMID:8390352","PMID:1646866","PMID:11506430","PMID:29127712","PMID:11074451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"telodendria","termid":"GO:0120208"}


id: PBO:0085440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polynucleotide kinase present on rDNA; required for efficient transcription termination by RNA polymerase I; functions with Las1p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; required for cell growth; mRNA is cell-cycle regulated","termid":"PBO:0085440"}


id: PBO:0066859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 159","termid":"PBO:0066859"}


id: PBO:0084407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid (LPA) phosphatase, nucleotidase; principle and physiological nucleotidase working on GMP, UMP and CMP; involved in LPA hydrolysis in response to phosphate starvation and ribose salvage pathway; phosphatase activity is soluble and Mg2+ dependent; expression is induced by low phosphate levels and by inactivation of Pho85p; repressed by Gcn4p under normal conditions; PHM8 has a paralog, SDT1, that arose from the whole genome duplication","termid":"PBO:0084407"}


id: PBO:0109634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 14 (pseudogene)","termid":"PBO:0109634"}


id: PBO:0057436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 553","termid":"PBO:0057436"}


id: PBO:0066396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 6","termid":"PBO:0066396"}


id: FYPO:0007185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:28377506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to HU","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during cellular response to hydroxyurea","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"abolished mitotic G2/M phase transition during cellular response to hydroxyurea","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"mitotic G2 phase arrest during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007185"}


id: PBO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030983"}


id: PBO:0054002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1327","termid":"PBO:0054002"}


id: PBO:0077521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 236","termid":"PBO:0077521"}


id: PBO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase inhibitor associated with endocytosis (predicted)","termid":"PBO:0001317"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction","termid":"GO:0075133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075135"}


id: PR:Q10065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trk2 gene.","definition_xrefs":["UniProtKB:Q10065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium transport protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.02c","synonyms":[{"name":"Spom972h-trk2","type":"exact"}],"termid":"PR:Q10065"}


id: PBO:0030808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_cortex","termid":"PBO:0030808"}


id: GO:0010378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the circadian clock maintains robust and accurate timing over a broad range of physiological temperatures. The circadian clock is an endogenous 24-h timer found in most eukaryotes and in photosynthetic bacteria. The clock drives rhythms in the physiology, biochemistry, and metabolism of the organisms.","definition_xrefs":["PMID:16617099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"temperature compensation of the circadian clock","synonyms":[{"name":"regulation of the circadian clock by temperature","type":"related"}],"termid":"GO:0010378"}


id: PBO:0027490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation","termid":"PBO:0027490"}


id: PBO:0070883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 15","termid":"PBO:0070883"}


id: GO:0060425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung morphogenesis","termid":"GO:0060425"}


id: FYPO:0003670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mycophenolic acid. Cells stop growing (and may die) at a concentration of mycophenolic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to mycophenolic acid","synonyms":[{"name":"hypersensitive to mycophenolic acid","type":"exact"},{"name":"sensitive to MPA","type":"exact"},{"name":"sensitive to mycophenolic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to mycophenolic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003670"}


id: GO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"modulation of VIP receptor activity in other organism","type":"exact"},{"name":"modulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"},{"name":"regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044517"}


id: MOD:00367
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362","Unimod:40#T","PubMed:14752058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 181.00-181.02 Da","termid":"MOD:00773"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(sulfooxy)butanoic acid","type":"exact"},{"name":"2-amino-3-hydroxybutanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfothreonine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-threonine","type":"exact"},{"name":"O3-sulfonothreonine","type":"exact"},{"name":"O3-sulfothreonine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"threonine sulfate ester","type":"exact"}],"termid":"MOD:00367"}


id: GO:0061118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}


id: MOD:00059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-acetyl-L-proline.","definition_xrefs":["PubMed:2928307","RESID:AA0050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-proline","synonyms":[{"name":"(2S)-1-acetyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-acetylproline","type":"exact"},{"name":"MOD_RES N-acetylproline","type":"exact"},{"name":"N-acetyl-L-proline","type":"exact"},{"name":"N-acetylated L-proline","type":"exact"},{"name":"N-acetylproline","type":"exact"},{"name":"NAcPro","type":"exact"},{"name":"acetylproline","type":"exact"}],"termid":"MOD:00059"}


id: PBO:0068902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 144, pseudogene","termid":"PBO:0068902"}


id: FYPO:0001004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cells to resume growth normally upon exiting G0 phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"viable upon G0 to G1 transition","termid":"FYPO:0001004"}


id: PBO:0048788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i1","termid":"PBO:0048788"}


id: GO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining the zonula adherens junction, the cell-cell adherens junction formed near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction maintenance","termid":"GO:0034334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zonula adherens maintenance","termid":"GO:0045218"}


id: MOD:00879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["PubMed:2081203","Unimod:457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"naphthalene-2,3-dicarboxaldehyde","synonyms":[{"name":"NDA","type":"related"},{"name":"naphthalene-2,3-dicarboxaldehyde","type":"related"}],"termid":"MOD:00879"}


id: PBO:0056636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 13 pseudogene 1","termid":"PBO:0056636"}


id: PATO:0002402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multiple lesions some interconnecting with each other.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-localised","termid":"PATO:0001791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal to coalescing","termid":"PATO:0002402"}


id: PBO:0077725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNRC6B divergent transcript","termid":"PBO:0077725"}


id: GO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"retinal binding","synonyms":[{"name":"UV-sensitive opsin","type":"related"},{"name":"blue-sensitive opsin","type":"related"},{"name":"green-sensitive opsin","type":"related"},{"name":"long-wave-sensitive opsin","type":"related"},{"name":"opsin","type":"related"},{"name":"red-sensitive opsin","type":"related"},{"name":"retinaldehyde binding","type":"exact"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0016918"}


id: GO:0032802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a low-density lipoprotein particle receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"low-density lipoprotein receptor particle metabolic process","termid":"GO:0032799"},{"relation_name":"is_a","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"LDL receptor breakdown","type":"exact"},{"name":"LDL receptor catabolic process","type":"exact"},{"name":"LDL receptor catabolism","type":"related"},{"name":"LDL receptor degradation","type":"exact"},{"name":"low-density lipoprotein receptor breakdown","type":"exact"},{"name":"low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"low-density lipoprotein receptor catabolism","type":"exact"},{"name":"low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032802"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["PMID:23072462","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"positive regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120142"}


id: PBO:0091923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus3","termid":"PBO:0091923"}


id: PBO:0073077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2","termid":"PBO:0073077"}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: RO:0003306
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity influences the frequency of the condition in a population.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_condition","termid":"RO:0003304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_frequency_of_condition","termid":"RO:0003306"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: MOD:00311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine coenzyme A disulfide.","definition_xrefs":["RESID:AA0306","Unimod:281#C","PubMed:1734967","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine coenzyme A disulfide","synonyms":[{"name":"(2R)-2-amino-3-(2-((3-(((2R)-2,4-dihydroxy-3,3-dimethyl-1-oxobutyl)amino)-1-oxopropyl)amino)ethyl)dithio-propanoic acid 4'-ester with adenosine 5'-(trihydrogen diphosphate) 3'-(dihydrogen phosphate)","type":"exact"},{"name":"CoenzymeA","type":"related"},{"name":"Cysteine modified Coenzyme A","type":"related"},{"name":"L-cysteine coenzyme A disulfide","type":"exact"},{"name":"SCoACys","type":"exact"},{"name":"coenzyme A L-cysteine mixed disulfide","type":"exact"}],"termid":"MOD:00311"}


id: SO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of an rRNA transcription unit that is transcribed but discarded during maturation, not giving rise to any part of rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript_region","termid":"SO:0000838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_spacer_region","synonyms":[{"name":"transcribed spacer region","type":"exact"}],"termid":"SO:0000638"}


id: GO:0007016
data:
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id: GO:0009966
data:
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id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: PBO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_thiamine_starvation","termid":"PBO:0030373"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0063269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 15","termid":"PBO:0063269"}


id: PBO:0069094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 341, pseudogene","termid":"PBO:0069094"}


id: GO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","GOC:jsg","GOC:mah","ISBN:0815340729","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-alanine transmembrane transporter activity","synonyms":[{"name":"L-alanine transporter activity","type":"broad"}],"termid":"GO:0015180"}


id: PBO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm2","termid":"PBO:0090410"}


id: GO:0019615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol via the ortho-cleavage pathway, in which the catechol aromatic ring is broken between the two carbon atoms bearing hydroxyl groups.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"beta-ketoadipate pathway","termid":"GO:0042952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol catabolic process, ortho-cleavage","secondary_identifiers":["MetaCyc:CATECHOL-ORTHO-CLEAVAGE-PWY"],"synonyms":[{"name":"catechol breakdown, ortho-cleavage","type":"exact"},{"name":"catechol degradation, ortho-cleavage","type":"exact"}],"termid":"GO:0019615"}


id: FYPO:0000855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleosome positioning in heterochromatin","synonyms":[{"name":"abnormal nucleosome occupancy in heterochromatin","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000855"}


id: PBO:0026770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_uracil_import","termid":"PBO:0026770"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: GO:0051850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}


id: PBO:0061403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPR2 like, GATOR1 complex subunit","termid":"PBO:0061403"}


id: PBO:0056423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage receptor with collagenous structure","termid":"PBO:0056423"}


id: SO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element with extensive secondary structure, characterized by large modular imperfect long inverted repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foldback_element","synonyms":[{"name":"LVR element","type":"related"},{"name":"foldback element","type":"exact"},{"name":"long inverted repeat element","type":"related"}],"termid":"SO:0000238"}


id: GO:0039586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein phosphatase-1 (PP1) activity, a serine/threonine phosphatase. Different viruses modulate host PP1 activity to remove phosphates from various cellular substrates and downregulate the host's antiviral response.","definition_xrefs":["VZ:803","UniProtKB-KW:KW-1126"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host PP1 activity (obsolete GO:0039586)","synonyms":[{"name":"modulation of host PP1 activity by virus","type":"exact"},{"name":"regulation by virus of host PP1 activity","type":"exact"}],"termid":"GO:0039586"}


id: PBO:0016990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone) Nde1 (predicted)","termid":"PBO:0016990"}


id: PR:Q9UU85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.02","synonyms":[{"name":"Spom972h-ppk38","type":"exact"}],"termid":"PR:Q9UU85"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: GO:0010323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of isopentenyl diphosphate produced via the methylerythritol (MEP) pathway (mevalonate-independent).","definition_xrefs":["PMID:16531478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0010322"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"down regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"down-regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"downregulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"inhibition of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"narrow"},{"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"}],"termid":"GO:0010323"}


id: FYPO:0006684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and RNAs transcribed from the centromeric region is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah","PMID:19111658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"}],"interesting_parent_ids":["FYPO:0002131","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased centromeric transcript binding","synonyms":[{"name":"decreased cen transcript binding","type":"exact"},{"name":"decreased centromeric RNA binding","type":"exact"},{"name":"decreased protein-centromeric transcript interaction","type":"exact"},{"name":"reduced centromeric transcript binding","type":"exact"}],"termid":"FYPO:0006684"}


id: GO:0035059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that facilitates the assembly of nucleosomes on to newly synthesized DNA. In Drosophila, the complex comprises ASF1 and histones H3 and H4.","definition_xrefs":["GOC:bf","PMID:10591219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RCAF complex","synonyms":[{"name":"replication-coupling assembly factor complex","type":"exact"}],"termid":"GO:0035059"}


id: PBO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CLN3","termid":"PBO:0016567"}


id: FYPO:0002579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature transfer RNA (tRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"altered mature tRNA level during vegetative growth","synonyms":[{"name":"abnormal tRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature tRNA level during vegetative growth","type":"exact"},{"name":"altered mature cellular transfer RNA level during vegetative growth","type":"exact"},{"name":"altered mature tRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature tRNA transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0002579"}


id: PBO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C17orf28 ortholog 1","termid":"PBO:0001080"}


id: PBO:0054332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1725","termid":"PBO:0054332"}


id: GO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide catabolic process","synonyms":[{"name":"primary fatty amide catabolic process","type":"exact"}],"termid":"GO:0062127"}


id: MOD:01149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a sumo (Small Ubiquitin-related MOdifier) protein.","definition_xrefs":["PubMed:18688235","PubMed:12612601"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"sumoylated lysine","termid":"MOD:01149"}


id: PBO:0082490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I); phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; required for H3K36 trimethylation but not dimethylation by Set2p; suggested stimulatory role in 80S formation during translation initiation; similar to the Drosophila dCDK12 and human CDK12 and probably CDK13","termid":"PBO:0082490"}


id: PBO:0035861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton","termid":"PBO:0035861"}


id: PBO:0003127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (predicted)","termid":"PBO:0003127"}


id: PBO:0049082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137B","termid":"PBO:0049082"}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: PBO:0112514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, possibly DNA J domain, implicated in protein folding, Hua1","termid":"PBO:0112514"}


id: PBO:0055789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoxygenase homology PLAT domains 1","termid":"PBO:0055789"}


id: PBO:0044940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR24 divergent transcript","termid":"PBO:0044940"}


id: GO:0021965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the spinal cord ventral commissure are generated and organized.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"spinal cord development","termid":"GO:0021510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord ventral commissure morphogenesis","termid":"GO:0021965"}


id: GO:0031119
data:
  {"annotated_genes":["SJAG_01172","SJAG_04065","SJAG_00319","SJAG_02978","SJAG_03572","SJAG_00088","SJAG_01054"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87316,90762,98575,102291,108555,110362,113216],"is_not":false,"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031119","terms_by_termid":{"GO:0031119":null}}


id: PBO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 16","termid":"PBO:0070961"}


id: PBO:0069664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 941, pseudogene","termid":"PBO:0069664"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sakuranetin + O2 + NADPH + H+ = carthamidin-7-methyl ether + H2O + NADP.","definition_xrefs":["GOC:pz","PMID:23184958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: PBO:0066074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 2","termid":"PBO:0066074"}


id: PBO:0066733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 30","termid":"PBO:0066733"}


id: PR:O42945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.10c","secondary_identifiers":["UniProtKB:O42945"],"synonyms":[{"name":"Spom972h-DHX15","type":"exact"}],"termid":"PR:O42945"}


id: PBO:0062877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthodenticle homeobox 1","termid":"PBO:0062877"}


id: GO:1900193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oocyte maturation","termid":"GO:1900193"}


id: GO:0051479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannosylglycerate, a very common compatible solute in thermophilic and hyperthermophilic organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"mannosylglycerate metabolic process","termid":"GO:0051478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannosylglycerate biosynthetic process","synonyms":[{"name":"mannosylglycerate anabolism","type":"exact"},{"name":"mannosylglycerate biosynthesis","type":"exact"},{"name":"mannosylglycerate formation","type":"exact"},{"name":"mannosylglycerate synthesis","type":"exact"}],"termid":"GO:0051479"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","PMID:23721876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: FYPO:0001835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium that is more acidic than standard fission yeast media (about 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on acidic medium","synonyms":[{"name":"normal cell population growth on acidic medium","type":"exact"},{"name":"normal cellular response to acidity","type":"related"},{"name":"normal vegetative cell population growth on acidic medium","type":"exact"}],"termid":"FYPO:0001835"}


id: PR:Q9US35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.06","synonyms":[{"name":"D-serine deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DSD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1039.06","type":"exact"}],"termid":"PR:Q9US35"}


id: PBO:0048591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 5 pseudogene","termid":"PBO:0048591"}


id: GO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis on or near host (obsolete GO:0052145)","termid":"GO:0052145"}


id: MOD:01993
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the beta-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"}


id: GO:0072426
data:
  {"annotated_genes":["SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90648,98479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072426","terms_by_termid":{"GO:0072435":null}}


id: GO:0046110
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"xanthine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xanthine metabolism","type":"exact"}],"termid":"GO:0046110","terms_by_termid":{"GO:0009115":null}}


id: PBO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L3 divergent transcript","termid":"PBO:0045439"}


id: PBO:0049577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone A","termid":"PBO:0049577"}


id: PBO:0082390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-isopropylmalate dehydrogenase (IMDH); catalyzes the third step in the leucine biosynthesis pathway; can additionally catalyze the conversion of beta-ethylmalate into alpha-ketovalerate","termid":"PBO:0082390"}


id: GO:0006100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving intermediates of the tricarboxylic acid cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tricarboxylic acid cycle intermediate metabolic process (obsolete GO:0006100)","synonyms":[{"name":"Krebs cycle intermediate metabolic process","type":"exact"},{"name":"Krebs cycle intermediate metabolism","type":"exact"},{"name":"TCA intermediate metabolic process","type":"exact"},{"name":"TCA intermediate metabolism","type":"exact"},{"name":"citric acid cycle intermediate metabolic process","type":"exact"},{"name":"citric acid cycle intermediate metabolism","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolic process","type":"exact"},{"name":"tricarboxylic acid cycle intermediate metabolism","type":"exact"}],"termid":"GO:0006100"}


id: PBO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 2","termid":"PBO:0072727"}


id: GO:1904243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["PMID:12771515","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"negatively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"down regulation of pancreatic trypsinogen release","type":"exact"},{"name":"down regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"down-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"down-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"downregulation of pancreatic trypsinogen release","type":"exact"},{"name":"downregulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"inhibition of pancreatic trypsinogen release","type":"narrow"},{"name":"inhibition of pancreatic trypsinogen secretion","type":"narrow"},{"name":"negative regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904243"}


id: GO:0010923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"negative regulation of dephosphorylation","termid":"GO:0035305"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatase activity","termid":"GO:0010923"}


id: GO:1900714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol I biosynthetic process","termid":"GO:1900713"},{"relation_name":"negatively_regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of violaceol I biosynthetic process","synonyms":[{"name":"down regulation of violaceol I anabolism","type":"exact"},{"name":"down regulation of violaceol I biosynthesis","type":"exact"},{"name":"down regulation of violaceol I biosynthetic process","type":"exact"},{"name":"down regulation of violaceol I formation","type":"exact"},{"name":"down regulation of violaceol I synthesis","type":"exact"},{"name":"down-regulation of violaceol I anabolism","type":"exact"},{"name":"down-regulation of violaceol I biosynthesis","type":"exact"},{"name":"down-regulation of violaceol I biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol I formation","type":"exact"},{"name":"down-regulation of violaceol I synthesis","type":"exact"},{"name":"downregulation of violaceol I anabolism","type":"exact"},{"name":"downregulation of violaceol I biosynthesis","type":"exact"},{"name":"downregulation of violaceol I biosynthetic process","type":"exact"},{"name":"downregulation of violaceol I formation","type":"exact"},{"name":"downregulation of violaceol I synthesis","type":"exact"},{"name":"inhibition of violaceol I anabolism","type":"exact"},{"name":"inhibition of violaceol I biosynthesis","type":"exact"},{"name":"inhibition of violaceol I biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol I formation","type":"exact"},{"name":"inhibition of violaceol I synthesis","type":"exact"},{"name":"negative regulation of violaceol I anabolism","type":"exact"},{"name":"negative regulation of violaceol I biosynthesis","type":"exact"},{"name":"negative regulation of violaceol I formation","type":"exact"},{"name":"negative regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900714"}


id: PBO:0049843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR5A divergent transcript","termid":"PBO:0049843"}


id: PBO:0071465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 6","termid":"PBO:0071465"}


id: PBO:0036304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg11","termid":"PBO:0036304"}


id: PBO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly protien Sdh8 (predicted)","termid":"PBO:0018070"}


id: PBO:0089998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr103","termid":"PBO:0089998"}


id: PBO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit, Far11/Csc2","termid":"PBO:0012275"}


id: GO:0071667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA/DNA hybrid.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid binding","termid":"GO:0003676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA/RNA hybrid binding","synonyms":[{"name":"RNA/DNA hybrid binding","type":"exact"}],"termid":"GO:0071667"}


id: PBO:0072825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component pseudogene 1","termid":"PBO:0072825"}


id: PBO:0017529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3 (prediected)","termid":"PBO:0017529"}


id: GO:1905470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of clathrin-coated pit assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of clathrin-coated pit assembly (obsolete GO:1905470)","synonyms":[{"name":"activation of clathrin-coated pit assembly","type":"narrow"},{"name":"activation of clathrin-coated pit formation","type":"narrow"},{"name":"activation of coated pit assembly","type":"narrow"},{"name":"activation of coated pit formation","type":"narrow"},{"name":"positive regulation of clathrin-coated pit formation","type":"exact"},{"name":"positive regulation of coated pit assembly","type":"exact"},{"name":"positive regulation of coated pit formation","type":"exact"},{"name":"up regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up regulation of clathrin-coated pit formation","type":"exact"},{"name":"up regulation of coated pit assembly","type":"exact"},{"name":"up regulation of coated pit formation","type":"exact"},{"name":"up-regulation of clathrin-coated pit assembly","type":"exact"},{"name":"up-regulation of clathrin-coated pit formation","type":"exact"},{"name":"up-regulation of coated pit assembly","type":"exact"},{"name":"up-regulation of coated pit formation","type":"exact"},{"name":"upregulation of clathrin-coated pit assembly","type":"exact"},{"name":"upregulation of clathrin-coated pit formation","type":"exact"},{"name":"upregulation of coated pit assembly","type":"exact"},{"name":"upregulation of coated pit formation","type":"exact"}],"termid":"GO:1905470"}


id: GO:0072151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell fate commitment","termid":"GO:0072151"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: GO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta2-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta2-adrenergic receptor activity","synonyms":[{"name":"beta2 adrenoceptor","type":"exact"}],"termid":"GO:0004941"}


id: PBO:0069379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 639, pseudogene","termid":"PBO:0069379"}


id: PBO:0063345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 5","termid":"PBO:0063345"}


id: GO:0035264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an entire multicellular organism, as opposed to cell growth.","definition_xrefs":["GOC:dph","GOC:curators","GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism growth","synonyms":[{"name":"body growth","type":"related"}],"termid":"GO:0035264"}


id: FYPO:0006720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to osmotic stress is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to osmotic stress.","definition_xrefs":["PomBase:mah","PMID:28924043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to osmotic stress","synonyms":[{"name":"normal cell cycle delay following osmotic stress","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to osmotic stress","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006720"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: PBO:0059540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Gly (GGN)","termid":"PBO:0059540"}


id: PBO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-P-Man dependent alpha(1-3) mannosyltransferase Alg3 (predicted)","termid":"PBO:0001646"}


id: GO:1990262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of anti-Mullerian hormone to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Upon ligand binding, the receptor  forms a complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators.","definition_xrefs":["PMID:23624077","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor signaling pathway","synonyms":[{"name":"anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1990262"}


id: PBO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 1","termid":"PBO:0046701"}


id: GO:0021740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pontine nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:curators","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"principal sensory nucleus of trigeminal nerve development","synonyms":[{"name":"pontine nucleus development","type":"broad"}],"termid":"GO:0021740"}


id: GO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:rph","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of cardiac muscle tissue growth","termid":"GO:0055023"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell proliferation","synonyms":[{"name":"positive regulation of heart muscle cell proliferation","type":"related"}],"termid":"GO:0060045"}


id: PBO:0035694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of,_negative_effect","termid":"PBO:0035694"}


id: PBO:0077127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TINAG antisense RNA 1","termid":"PBO:0077127"}


id: SO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript encoding the cleavage site for a ribonuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease_site","synonyms":[{"name":"ribonuclease site","type":"exact"}],"termid":"SO:0001977"}


id: PBO:0078576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 52","termid":"PBO:0078576"}


id: PATO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the nature or characteristic of, a ligament; composed of the tissue proper to ligaments.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligamentous","termid":"PATO:0002314"}


id: FYECO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ferrous chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl2","synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron dichloride added","type":"related"},{"name":"iron(II) chloride","type":"exact"}],"termid":"FYECO:0000174"}


id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: PR:O42890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein cao2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.16c","synonyms":[{"name":"Spom972h-cao2","type":"exact"}],"termid":"PR:O42890"}


id: PBO:0049531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 2","termid":"PBO:0049531"}


id: GO:0046579
data:
  {"annotated_genes":["SJAG_00329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87271],"is_not":false,"summary":null,"term":"GO:0046579"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Ras protein signal transduction","termid":"GO:0046578"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of Ras protein signal transduction","type":"narrow"},{"name":"stimulation of Ras protein signal transduction","type":"narrow"},{"name":"up regulation of Ras protein signal transduction","type":"exact"},{"name":"up-regulation of Ras protein signal transduction","type":"exact"},{"name":"upregulation of Ras protein signal transduction","type":"exact"}],"termid":"GO:0046579","terms_by_termid":{"GO:0046579":null}}


id: FYPO:0004785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to menadione","synonyms":[{"name":"increased RNA accumulation during cellular response to menadione","type":"related"},{"name":"increased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to menadione","type":"narrow"},{"name":"increased transcript level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0004785"}


id: PBO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 12","termid":"PBO:0070859"}


id: PBO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 12","termid":"PBO:0071172"}


id: GO:0017114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a protease by a wide-spectrum protease inhibitor. A wide-spectrum protease inhibitor is a protein having a peptide stretch which contains specific cleavage sites for different proteinases enabling inhibition of all four classes of proteinases by formation of a covalent bond between the inhibitor and the protease.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete wide-spectrum protease inhibitor activity (obsolete GO:0017114)","synonyms":[{"name":"wide-spectrum protease inhibitor activity","type":"exact"},{"name":"wide-spectrum proteinase inhibitor","type":"exact"}],"termid":"GO:0017114"}


id: PBO:0090787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc2","termid":"PBO:0090787"}


id: GO:0045456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ecdysteroid biosynthetic process","synonyms":[{"name":"ecdysteroid anabolism","type":"exact"},{"name":"ecdysteroid biosynthesis","type":"exact"},{"name":"ecdysteroid formation","type":"exact"},{"name":"ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045456"}


id: PBO:0059602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 14","termid":"PBO:0059602"}


id: GO:0035062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nucleoplasmic speckle distributed in the interchromatin space of cells in close proximity to chromatin. Omega speckles are distinct from interchromatin granules and contain heterogeneous nuclear RNA-binding proteins (hnRNPs).","definition_xrefs":["GOC:bf","PMID:10984439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear speck","termid":"GO:0016607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"omega speckle","termid":"GO:0035062"}


id: PBO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-beta-N-acetylglucosaminidase","termid":"PBO:0046314"}


id: PBO:0056023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 1","termid":"PBO:0056023"}


id: PBO:0045386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 8","termid":"PBO:0045386"}


id: SO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant extending the CDS at the 5' end, that causes elongation of the resulting polypeptide sequence at the N terminus.","definition_xrefs":["PMID:27984720","PMID:15864293","PMID:14732127","PMID:31216041","PMID:32020195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_extension","termid":"SO:0002227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_five_prime_extension","synonyms":[{"name":"CDS Extension 5 prime","type":"exact"},{"name":"CDS Extension five prime","type":"exact"},{"name":"elongated CDS five prime","type":"exact"},{"name":"elongated_CDS_five_prime","type":"exact"}],"termid":"SO:0002228"}


id: PBO:0054961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2375","termid":"PBO:0054961"}


id: SO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from a different organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Allopolyploid"],"termid":"SO:0001256"}


id: PBO:0058897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12115","termid":"PBO:0058897"}


id: PBO:0066669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 2","termid":"PBO:0066669"}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: PBO:0029023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_protein_kinase_activity","termid":"PBO:0029023"}


id: GO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a trophoblast cell elongates to contribute to the branching of the placenta.","definition_xrefs":["PMID:16916377","GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"branching involved in labyrinthine layer morphogenesis","termid":"GO:0060670"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell morphogenesis involved in placental branching","termid":"GO:0060672"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: PBO:0073423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 1","termid":"PBO:0073423"}


id: PBO:0064616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 6","termid":"PBO:0064616"}


id: PBO:0048537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 3","termid":"PBO:0048537"}


id: PBO:0042788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 162","termid":"PBO:0042788"}


id: GO:0099187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"presynaptic cytoskeleton organization","termid":"GO:0099187"}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: GO:1990177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing IHF heterodimers (an alpha and a beta chain) bound to DNA. IHF binds to double-stranded DNA in a structure- and sequence-specific manner and bends the DNA into a nucleosome-like structure, the bacterial nucleoid.","definition_xrefs":["GOC:bhm","PMID:17097674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"DNA bending complex","termid":"GO:1990104"},{"relation_name":"part_of","term_name":"bacterial nucleoid","termid":"GO:0043590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IHF-DNA complex","synonyms":[{"name":"IHF complex","type":"exact"},{"name":"IHFa-IHFb-DNA complex","type":"exact"}],"termid":"GO:1990177"}


id: GO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrolase activity","synonyms":[{"name":"activation of hydrolase activity","type":"narrow"},{"name":"hydrolase activator","type":"exact"},{"name":"stimulation of hydrolase activity","type":"narrow"},{"name":"up regulation of hydrolase activity","type":"exact"},{"name":"up-regulation of hydrolase activity","type":"exact"},{"name":"upregulation of hydrolase activity","type":"exact"}],"termid":"GO:0051345"}


id: FYPO:0006169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide","synonyms":[{"name":"normal protein phosphorylation during cellular response to 4-NQO","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to 4NQO","type":"exact"}],"termid":"FYPO:0006169"}


id: GO:1903855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:kmv","PMID:23437011","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"positively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress response to copper ion","synonyms":[{"name":"activation of response to copper ion stress","type":"narrow"},{"name":"activation of response to copper toxicity","type":"related"},{"name":"activation of stress response to copper ion","type":"narrow"},{"name":"positive regulation of response to copper ion stress","type":"exact"},{"name":"positive regulation of response to copper toxicity","type":"related"},{"name":"up regulation of response to copper ion stress","type":"exact"},{"name":"up regulation of response to copper toxicity","type":"related"},{"name":"up regulation of stress response to copper ion","type":"exact"},{"name":"up-regulation of response to copper ion stress","type":"exact"},{"name":"up-regulation of response to copper toxicity","type":"related"},{"name":"up-regulation of stress response to copper ion","type":"exact"},{"name":"upregulation of response to copper ion stress","type":"exact"},{"name":"upregulation of response to copper toxicity","type":"related"},{"name":"upregulation of stress response to copper ion","type":"exact"}],"termid":"GO:1903855"}


id: FYPO:0003826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is elongated, has two nuclei but no septum, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","termid":"FYPO:0003825"},{"relation_name":"is_a","term_name":"inviable elongated binucleate aseptate cell","termid":"FYPO:0004684"},{"relation_name":"is_a","term_name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"inviable elongated binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","synonyms":[{"name":"inviable cell with nuclear division arrest at G2/M without septation (elongated cell)","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic G2/M phase transition arrest before cell separation","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation during mitotic cell cycle","type":"related"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cytokinesis","type":"exact"},{"name":"inviable elongated binucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition before cell separation during vegetative growth","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest at G2/M before division septum assembly","type":"exact"},{"name":"inviable elongated binucleate cell with mitotic cell cycle arrest before septation","type":"exact"},{"name":"lethal; elongated binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"exact"},{"name":"mitotic G2/M arrest after failed cytokinesis, with inviable elongated cell","type":"related"},{"name":"mitotic cell cycle arrest at G2/M before cell separation with inviable elongated binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0003826"}


id: PBO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SNR128","termid":"PBO:0016082"}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94856,106781,106787],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["GOC:hjd","PMID:10854427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: PBO:0082832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved zinc-finger domain protein involved in pre-mRNA splicing; critical for splicing of nearly all intron-containing genes; required for assembly of U4 snRNA into the U4/U6 particle","termid":"PBO:0082832"}


id: PBO:0052632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8","termid":"PBO:0052632"}


id: PBO:0086534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps verified ORF LSM5/YER146W","termid":"PBO:0086534"}


id: GO:1905716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cornification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"negatively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cornification","synonyms":[{"name":"down regulation of cornification","type":"exact"},{"name":"down-regulation of cornification","type":"exact"},{"name":"downregulation of cornification","type":"exact"},{"name":"inhibition of cornification","type":"narrow"}],"termid":"GO:1905716"}


id: GO:0004097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 catechol + O2 = 2 1,2-benzoquinone + 2 H2O. This reaction catalyzes exclusively the oxidation of catechols (i.e., o-diphenols) to the corresponding o-quinones.","definition_xrefs":["EC:1.10.3.1","PMID:22120533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"catechol oxidase activity","secondary_identifiers":["MetaCyc:CATECHOL-OXIDASE-RXN","GO:0102316","GO:0036263","RHEA:21632","GO:0036264"],"synonyms":[{"name":"L-DOPA monooxygenase activity","type":"narrow"},{"name":"L-dopa oxidase activity","type":"narrow"},{"name":"catecholase","type":"exact"},{"name":"diphenol oxidase activity","type":"exact"},{"name":"dopamine monooxygenase activity","type":"narrow"},{"name":"o-diphenol oxidoreductase","type":"exact"},{"name":"o-diphenolase activity","type":"exact"},{"name":"phenolase activity","type":"broad"},{"name":"polyphenol oxidase activity","type":"related"},{"name":"pyrocatechol oxidase","type":"broad"},{"name":"tyrosinase activity","type":"broad"}],"termid":"GO:0004097"}


id: PBO:0056197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A7, pseudogene","termid":"PBO:0056197"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: PBO:0004024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO deconjugating enzyme Ulp1","termid":"PBO:0004024"}


id: GO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the Purkinje myocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during Purkinje myocyte action potential","termid":"GO:0086051"}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: GO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + ATP = N-acetyl-D-glucosamine 6-phosphate + ADP + H+.","definition_xrefs":["RHEA:17417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine kinase activity","secondary_identifiers":["Reactome:R-HSA-6803771","MetaCyc:N-ACETYLGLUCOSAMINE-KINASE-RXN","EC:2.7.1.59","KEGG_REACTION:R01201"],"synonyms":[{"name":"2-acetylamino-2-deoxy-D-glucose kinase activity","type":"related"},{"name":"ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity","type":"related"},{"name":"GlcNAc kinase activity","type":"related"},{"name":"acetylaminodeoxyglucokinase activity","type":"related"},{"name":"acetylglucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0045127"}


id: GO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The portion of the plasma membrane surrounding an invadopodium.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium membrane (obsolete GO:0071438)","termid":"GO:0071438"}


id: FYPO:0000399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G2/M transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic G2/M phase transition","synonyms":[{"name":"abnormal G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"abnormal cell cycle progression through mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"abnormal mitotic G2/M cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M phase transition","type":"exact"},{"name":"cell cycle progression through the G2/M phase transition: abnormal","type":"related"}],"termid":"FYPO:0000399"}


id: PBO:0062454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 126 pseudogene","termid":"PBO:0062454"}


id: GO:1901948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","termid":"GO:1901947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate breakdown","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolism","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate degradation","type":"exact"}],"termid":"GO:1901948"}


id: GO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-23 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 receptor activity","synonyms":[{"name":"IL-23 receptor activity","type":"exact"},{"name":"IL-23R","type":"exact"}],"termid":"GO:0042020"}


id: GO:0044139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont on or near host (obsolete GO:0044139)","termid":"GO:0044139"}


id: FYPO:0003827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is decreased.","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"decreased ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased ribosome S6 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced ribosomal S6 protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003827"}


id: PBO:0041884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2 pseudogene 1","termid":"PBO:0041884"}


id: PBO:0075888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1","termid":"PBO:0075888"}


id: PBO:0026683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_at_low_temperature","termid":"PBO:0026683"}


id: GO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermatid nuclear differentiation","synonyms":[{"name":"down regulation of spermatid nuclear differentiation","type":"exact"},{"name":"down-regulation of spermatid nuclear differentiation","type":"exact"},{"name":"downregulation of spermatid nuclear differentiation","type":"exact"},{"name":"inhibition of spermatid nuclear differentiation","type":"narrow"}],"termid":"GO:0045701"}


id: PR:O94519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf30 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor spf30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.02c","synonyms":[{"name":"Spom972h-spf30","type":"exact"},{"name":"survival of motor neuron-related-splicing factor 30 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94519"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: GO:1905844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to gamma radiation.","definition_xrefs":["GOC:TermGenie","PMID:23505386","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to gamma radiation","termid":"GO:1905843"},{"relation_name":"is_a","term_name":"negative regulation of response to gamma radiation","termid":"GO:2001229"},{"relation_name":"negatively_regulates","term_name":"cellular response to gamma radiation","termid":"GO:0071480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to gamma radiation","synonyms":[{"name":"down regulation of cellular response to gamma radiation","type":"exact"},{"name":"down regulation of cellular response to gamma ray","type":"related"},{"name":"down regulation of cellular response to gamma-ray photon","type":"related"},{"name":"down-regulation of cellular response to gamma radiation","type":"exact"},{"name":"down-regulation of cellular response to gamma ray","type":"related"},{"name":"down-regulation of cellular response to gamma-ray photon","type":"related"},{"name":"downregulation of cellular response to gamma radiation","type":"exact"},{"name":"downregulation of cellular response to gamma ray","type":"related"},{"name":"downregulation of cellular response to gamma-ray photon","type":"related"},{"name":"inhibition of cellular response to gamma radiation","type":"narrow"},{"name":"inhibition of cellular response to gamma ray","type":"related"},{"name":"inhibition of cellular response to gamma-ray photon","type":"related"},{"name":"negative regulation of cellular response to gamma ray","type":"related"},{"name":"negative regulation of cellular response to gamma-ray photon","type":"related"}],"termid":"GO:1905844"}


id: PBO:0075170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide E","termid":"PBO:0075170"}


id: PBO:0056865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 1","termid":"PBO:0056865"}


id: PBO:0077317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52B","termid":"PBO:0077317"}


id: PBO:0044033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 2 Y-linked","termid":"PBO:0044033"}


id: GO:0030154
data:
  {"annotated_genes":["SJAG_00663","SJAG_04868","SJAG_04483","SJAG_03057","SJAG_01531","SJAG_04271","SJAG_04080","SJAG_03013","SJAG_04922","SJAG_00826","SJAG_02392","SJAG_02169","SJAG_00405","SJAG_04236","SJAG_03688","SJAG_00486","SJAG_02529","SJAG_01483","SJAG_03587","SJAG_00821","SJAG_03250","SJAG_02712","SJAG_04901","SJAG_04010","SJAG_00514","SJAG_03746","SJAG_01662","SJAG_03915","SJAG_04275","SJAG_00971","SJAG_02248","SJAG_04781","SJAG_04184","SJAG_05309","SJAG_03536","SJAG_01321","SJAG_04140","SJAG_04853","SJAG_04238","SJAG_00993","SJAG_03090","SJAG_02241","SJAG_03581","SJAG_02736","SJAG_01769","SJAG_04859","SJAG_00974","SJAG_04470","SJAG_00114","SJAG_04615","SJAG_03557","SJAG_02320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91951,90680,85994],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[92623,107574,91474,108774,106185,101183,110004,103790,93039,96805,114562,92972,100210],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030437"},{"annotations":[90566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[113816,84365,86376,87869],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[105145,113826,113817,100253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[84853],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[106186,101034,105375,87602,93686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[91475,114856,103453,110005,95910,115037,93687,97791,93646,101349,114563,95978,87395,106187,95909,112984,94916],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99003,95911,100211,102897,88394,92973,93647,95912,103791,110006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107265],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86848],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98372],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86850],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88289],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[112036,90607,95913,95914,96197,102074],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_differentiation"],"termid":"GO:0030154","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034217":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0057282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 503","termid":"PBO:0057282"}


id: FYPO:0003366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pyridoxine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pyridoxine import","termid":"FYPO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased pyridoxine import","synonyms":[{"name":"decreased pyridoxine import across plasma membrane","type":"exact"},{"name":"decreased pyridoxine import during mitotic cell cycle","type":"related"},{"name":"decreased pyridoxine import during vegetative growth","type":"exact"},{"name":"decreased pyridoxine import into cell","type":"exact"},{"name":"decreased pyridoxine uptake","type":"exact"},{"name":"reduced pyridoxine import","type":"exact"}],"termid":"FYPO:0003366"}


id: PBO:0075681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1","termid":"PBO:0075681"}


id: GO:1990726
data:
  {"annotated_genes":["SJAG_01327","SJAG_03070","SJAG_03954","SJAG_04880","SJAG_03460","SJAG_05240","SJAG_02469"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91921,102396,104595,106002,108941,110992,112463],"is_not":false,"summary":null,"term":"GO:1990726"}]},"cv_name":"cellular_component","definition":"A conserved, heteroheptameric, cytoplasmic protein complex composed of Lsm1, Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Pat1, or orthologs thereof, that shows a strong binding preference for oligoadenylated RNAs over polyadenylated RNAs. May bind further associated proteins. Facilitates the deadenylation-dependent decapping of mRNA in the P-body thereby regulating mRNA decay and subsequent degradation by the 5' to 3' pathway.","definition_xrefs":["PMID:27627834","GOC:bhm","GOC:krc","PMID:19121818","PMID:23620288","PMID:24139796","PMID:28768202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Lsm1-7-Pat1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990726","terms_by_termid":{"GO:1990726":null}}


id: GO:0045228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides in the slime layer, a diffused layer of polysaccharide exterior to the bacterial cell wall.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide biosynthetic process","termid":"GO:0045226"},{"relation_name":"is_a","term_name":"slime layer organization","termid":"GO:0045231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"slime layer polysaccharide biosynthetic process","synonyms":[{"name":"slime layer polysaccharide anabolism","type":"exact"},{"name":"slime layer polysaccharide biosynthesis","type":"exact"},{"name":"slime layer polysaccharide formation","type":"exact"},{"name":"slime layer polysaccharide synthesis","type":"exact"}],"termid":"GO:0045228"}


id: GO:0022883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation efflux transmembrane transporter activity","termid":"GO:0046583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"zinc efflux transmembrane transporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"exact"}],"termid":"GO:0022883"}


id: PBO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 16","termid":"PBO:0070343"}


id: PBO:0064298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 1","termid":"PBO:0064298"}


id: PBO:0082971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that regulates protein phosphatase 1 Glc7p; protein overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate","termid":"PBO:0082971"}


id: PBO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog, implicated in gene expression","termid":"PBO:0110062"}


id: FYPO:0002578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydroxyurea than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to hydroxyurea","synonyms":[{"name":"resistance to HU","type":"exact"},{"name":"resistance to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to hydroxyurea","type":"exact"}],"termid":"FYPO:0002578"}


id: FYPO:0003439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that has branches. For example, the septum may be Y-shaped.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"branched septum","synonyms":[{"name":"branched septum during mitotic cell cycle","type":"related"},{"name":"branched septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003439"}


id: PBO:0068056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 361","termid":"PBO:0068056"}


id: GO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in a cardiac muscle cell (a cardiomyocyte). A membrane potential is the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane potential","termid":"GO:0086036"}


id: PR:O74737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rid1 gene.","definition_xrefs":["UniProtKB:O74737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-binding protein rid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.12","synonyms":[{"name":"Spom972h-rid1","type":"exact"}],"termid":"PR:O74737"}


id: GO:0061232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric glomerular epithelium over time, from its formation to the mature structure. The mesonephric glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus in the mesonephros. The mesonephric glomerular epithelium consists of both parietal and visceral epithelium. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. A mesonephric glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"glomerular epithelium development","termid":"GO:0072010"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular epithelium development","termid":"GO:0061232"}


id: PR:O13696
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.03","secondary_identifiers":["UniProtKB:O13696"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPAC11G7.03","type":"related"},{"name":"Spom972h-IDH3G","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13696"}


id: PBO:0084411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m(7)GpppX pyrophosphatase regulator; non-essential, stress induced regulatory protein; modulates m7G-oligoribonucleotide metabolism; inhibits Dcs1p; regulated by Msn2p, Msn4p, and the Ras-cAMP-cAPK signaling pathway; mutant has increased aneuploidy tolerance; DCS2 has a paralog, DCS1, that arose from the whole genome duplication","termid":"PBO:0084411"}


id: PBO:0031181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_acid_phosphatase_activity","termid":"PBO:0031181"}


id: FYPO:0006411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which the levels of RNAs that encode histones, which normally vary over the course of the mitotic cell cycle, remain constant. All RNAs encoding histones, or one or more specific histone RNA, may be affected.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA level oscillation during mitotic cell cycle","termid":"FYPO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abolished histone RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abolished histone RNA level oscillation during vegetative growth","type":"related"},{"name":"abolished histone mRNA level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished histone transcript level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished periodic expression of histone RNA during mitotic cell cycle","type":"exact"},{"name":"histone RNA level oscillation abolished during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006411"}


id: PBO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 11","termid":"PBO:0061220"}


id: PBO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 3","termid":"PBO:0061484"}


id: PBO:0111842
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab subfamily","termid":"PBO:0111842"}


id: GO:0052006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the breakdown of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of substance in host (obsolete GO:0052006)","synonyms":[{"name":"catabolism by organism of substance in host","type":"exact"}],"termid":"GO:0052006"}


id: PBO:0026952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_histone_level","termid":"PBO:0026952"}


id: GO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to CIB, a protein that binds calcium as well as the alphaIIb-beta3 integrin.","definition_xrefs":["PMID:9030514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CIB complex","synonyms":[{"name":"ITGA2B-ITGB3-CIB1 complex","type":"narrow"}],"termid":"GO:0070769"}


id: PBO:0028756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028756"}


id: GO:0042979
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of the enzyme ornithine decarboxylase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042979","terms_by_termid":{"GO:0008073":null}}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: PBO:0068709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 90, pseudogene","termid":"PBO:0068709"}


id: PBO:0048607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIHCG inhibitor of miR-200b/200a/429 expression","termid":"PBO:0048607"}


id: PBO:0047623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin like 2","termid":"PBO:0047623"}


id: GO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 thiosulfate + 2 ferricytochrome c = tetrathionate + 2 ferrocytochrome c.","definition_xrefs":["EC:1.8.2.2","MetaCyc:THIOSULFATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, cytochrome as acceptor","termid":"GO:0016669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"thiosulfate dehydrogenase activity","secondary_identifiers":["RHEA:20549"],"synonyms":[{"name":"tetrathionate synthase activity","type":"related"},{"name":"thiosulfate oxidase activity","type":"related"},{"name":"thiosulfate-acceptor oxidoreductase activity","type":"related"},{"name":"thiosulfate-oxidizing enzyme","type":"related"},{"name":"thiosulfate:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"thiosulphate dehydrogenase activity","type":"exact"}],"termid":"GO:0050338"}


id: GO:0005758
data:
  {"annotated_genes":["SJAG_02744","SJAG_04208","SJAG_02038","SJAG_02229","SJAG_04533","SJAG_01560","SJAG_00564","SJAG_01996","SJAG_00230","SJAG_02887","SJAG_03199","SJAG_01140","SJAG_00449","SJAG_00480","SJAG_00668","SJAG_04008","SJAG_01647","SJAG_03574","SJAG_00576","SJAG_02917","SJAG_02656","SJAG_05199","SJAG_00196","SJAG_06440","SJAG_02504","SJAG_02524","SJAG_00687","SJAG_00455","SJAG_05398","SJAG_02360","SJAG_01949","SJAG_05261","SJAG_02592","SJAG_04116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84480,90466,90540,91068,93237,94226,94586,96149,96234,97357,98288,98296,100098,100962,100963,102926,103041,103237,103543,103552,105316,105584,105835,106443,109190,110717,111096,112172,112840,113107,113257],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[84805,88887,112331,86517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the mitochondrial envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01140":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02504":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_03574":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05199":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao118944228","GO:0031971"],"synonyms":[{"name":"mitochondrial envelope lumen","type":"exact"},{"name":"mitochondrial membrane lumen","type":"related"}],"termid":"GO:0005758","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: GO:1905496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of triplex DNA binding.","definition_xrefs":["GOC:TermGenie","PMID:26503245","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of triplex DNA binding","termid":"GO:1905496"}


id: MOD:01744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01744"}


id: GO:0051638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the barbed (or plus) end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament uncapping","termid":"GO:0051695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"barbed-end actin filament uncapping","synonyms":[{"name":"barbed end F-actin uncapping","type":"exact"},{"name":"barbed end actin filament uncapping","type":"exact"},{"name":"barbed-end F-actin uncapping","type":"exact"},{"name":"plus end F-actin uncapping","type":"exact"},{"name":"plus end actin filament uncapping","type":"exact"},{"name":"plus-end F-actin uncapping","type":"exact"},{"name":"plus-end actin filament uncapping","type":"exact"}],"termid":"GO:0051638"}


id: PBO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_positive_regulation_of","termid":"PBO:0034235"}


id: GO:0120169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cold stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of cold stimulus","termid":"GO:0062035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cold stimulus involved in thermoception","synonyms":[{"name":"sensory detection of cold stimulus during thermoception","type":"exact"},{"name":"sensory transduction of cold stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of cold stimulus","type":"exact"},{"name":"thermoception, sensory transduction of cold stimulus","type":"exact"}],"termid":"GO:0120169"}


id: PBO:0059034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23B","termid":"PBO:0059034"}


id: GO:0045692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac central cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac central cell differentiation","termid":"GO:0045691"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"embryo sac central cell differentiation","termid":"GO:0009559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac central cell differentiation","synonyms":[{"name":"down regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte central cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte central cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte central cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0045692"}


id: PBO:0067204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 269, pseudogene","termid":"PBO:0067204"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: PBO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11 (predicted)","termid":"PBO:0001425"}


id: PBO:0070003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1299, pseudogene","termid":"PBO:0070003"}


id: GO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a NK T cell population by cell division as part of an immune response.","definition_xrefs":["PMID:15771592","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NK T cell proliferation","termid":"GO:0001866"},{"relation_name":"is_a","term_name":"NK T cell activation involved in immune response","termid":"GO:0002288"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation involved in immune response","termid":"GO:0002310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell proliferation involved in immune response","synonyms":[{"name":"NK T cell proliferation during immune response","type":"related"},{"name":"NK T lymphocyte proliferation during immune response","type":"related"},{"name":"NK T-cell proliferation during immune response","type":"related"},{"name":"NK T-lymphocyte proliferation during immune response","type":"related"},{"name":"natural killer T lymphocyte proliferation during immune response","type":"related"},{"name":"natural killer T-cell proliferation during immune response","type":"related"},{"name":"natural killer T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002289"}


id: GO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining subsequent sites of bud emergence such that budding takes place at alternating poles of a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0007163"],"is_obsolete":false,"name":"bipolar cellular bud site selection","synonyms":[{"name":"bipolar bud site selection","type":"exact"},{"name":"bipolar budding","type":"broad"},{"name":"polar budding","type":"broad"}],"termid":"GO:0007121"}


id: PBO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 2","termid":"PBO:0040026"}


id: GO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a germinal center B cell. Germinal center B cells are rapidly cycling B cells which have downregulated IgD expression and exhibit high levels of binding by peanut agglutinin (PNA).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germinal center B cell differentiation","synonyms":[{"name":"germinal center B cell development","type":"related"},{"name":"germinal center B lymphocyte differentiation","type":"exact"},{"name":"germinal center B-cell differentiation","type":"exact"},{"name":"germinal center B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002314"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: SO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that modulates the transcription of a gene or genes.","definition_xrefs":["SO:regcreative","PMID:9679020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional_cis_regulatory_region","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:transcriptional_cis_regulatory_region","type":"exact"},{"name":"transcription-control region","type":"exact"},{"name":"transcriptional cis regulatory region","type":"exact"}],"termid":"SO:0001055"}


id: PBO:0064630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome proliferator activated receptor delta","termid":"PBO:0064630"}


id: PBO:0068982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 226, pseudogene","termid":"PBO:0068982"}


id: PBO:0038393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiplicity","termid":"PBO:0038393"}


id: PBO:0088073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36","termid":"PBO:0088073"}


id: PBO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate light chain Dil1","termid":"PBO:0002660"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: FYPO:0008095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell size phenotype in which a cell has a volume that is larger than normal during G0.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell size","termid":"FYPO:0008096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"increased cell size during G0","termid":"FYPO:0008095"}


id: PBO:0071334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 11","termid":"PBO:0071334"}


id: PBO:0067608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 776, pseudogene","termid":"PBO:0067608"}


id: GO:0090012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway that contributes to the formation of the primitive streak.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090012)","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090012"}


id: PBO:0004592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Pvg4 (predicted)","termid":"PBO:0004592"}


id: PBO:0050256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 34","termid":"PBO:0050256"}


id: PBO:0089866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery CIA1/CFD1 fusion protein","termid":"PBO:0089866"}


id: PBO:0070468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 3","termid":"PBO:0070468"}


id: PBO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Chz1 (predicted)","termid":"PBO:0001456"}


id: PBO:0049784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 19 pseudogene","termid":"PBO:0049784"}


id: PBO:0058651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6780a","termid":"PBO:0058651"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: PBO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit 7/8","termid":"PBO:0090686"}


id: PBO:0072423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 28","termid":"PBO:0072423"}


id: PATO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's gradually tapering to a slender point.","direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attenuate","termid":"PATO:0001982"}


id: PBO:0042606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 6","termid":"PBO:0042606"}


id: GO:0035074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The act of becoming a pupa, a resting stage in the life cycle of organisms with complete metamorphosis. This event marks the end of the prepupal period and the beginning of the pupal period.","definition_xrefs":["ISBN:0582227089","ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pupal development","termid":"GO:0035209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pupation","secondary_identifiers":["Wikipedia:Pupa"],"synonyms":[{"name":"head eversion","type":"exact"},{"name":"prepupal-pupal transition","type":"exact"}],"termid":"GO:0035074"}


id: SO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_C_cluster","synonyms":[{"name":"D J C cluster","type":"exact"},{"name":"D-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000509"}


id: GO:0046844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the micropyle, a single cone-shaped specialization of the chorion that allows sperm entry into the egg prior to fertilization.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"chorion micropyle formation","termid":"GO:0046844"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: PBO:0089101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbm10","termid":"PBO:0089101"}


id: PBO:0078841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 3-5","termid":"PBO:0078841"}


id: PBO:0049879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma, down-regulated 1","termid":"PBO:0049879"}


id: GO:0018103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via a C atom.","definition_xrefs":["RESID:AA0217","PMID:7947762","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein C-linked glycosylation","synonyms":[{"name":"protein amino acid C-linked glycosylation","type":"exact"}],"termid":"GO:0018103"}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: PBO:0067201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 266, pseudogene","termid":"PBO:0067201"}


id: FYPO:0004133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal reactive oxygen species level during nitrogen starvation","synonyms":[{"name":"normal ROS accumulation during nitrogen starvation","type":"related"},{"name":"normal ROS level during nitrogen starvation","type":"exact"},{"name":"normal cellular reactive oxygen species level during nitrogen starvation","type":"exact"},{"name":"normal reactive oxygen species level during nitrogen depletion","type":"exact"},{"name":"normal reactive oxygen species level during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004133"}


id: PBO:0073246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPSECS antisense RNA 1 (head to head)","termid":"PBO:0073246"}


id: PBO:0046263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 2","termid":"PBO:0046263"}


id: PBO:0011994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR ubiquitin ligase Ubr11","termid":"PBO:0011994"}


id: GO:0070461
data:
  {"annotated_genes":["SJAG_02458","SJAG_00584","SJAG_01711","SJAG_00641","SJAG_02066","SJAG_01658","SJAG_03668","SJAG_03752","SJAG_00087","SJAG_00184","SJAG_04274","SJAG_02927","SJAG_02773","SJAG_04613","SJAG_01475","SJAG_02541","SJAG_04205","SJAG_03599","SJAG_03776"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107815,110370,94599,84494,99450,109043,102964,93919,101829,108616,112347,111442,87512,103395,103753,84641,113600,85413,113648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[69907,62464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A histone acetyltransferase complex that acetylates nucleosomal histones H2B, H3, or H4 and is required for the expression of a subset of Pol II-transcribed genes. This complex includes the acetyltransferases GCN5/KAT2A or PCAF/KAT2B, several proteins of the ADA, SGF and SPT families, and several TBP-associate proteins (TAFs).","definition_xrefs":["PMID:17337012","PMID:10637607","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SAGA-type complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAGA family complex","type":"exact"}],"termid":"GO:0070461","terms_by_termid":{"GO:0000124":null,"GO:0046695":null}}


id: PBO:0089194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0089194"}


id: PBO:0067395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 500, pseudogene","termid":"PBO:0067395"}


id: PBO:0036330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl2","termid":"PBO:0036330"}


id: PBO:0069902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1193, pseudogene","termid":"PBO:0069902"}


id: PBO:0061811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 1 Y-linked","termid":"PBO:0061811"}


id: PBO:0059923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 9","termid":"PBO:0059923"}


id: PBO:0053361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 268-2, pseudogene","termid":"PBO:0053361"}


id: GO:1902242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of copal-8-ol diphosphate(3-).","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) catabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) breakdown","type":"exact"},{"name":"copal-8-ol diphosphate(3-) catabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) degradation","type":"exact"}],"termid":"GO:1902242"}


id: PBO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-biomechanically_related_to","termid":"PBO:0034152"}


id: PBO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic oncogenic antisense to MET transcript","termid":"PBO:0043607"}


id: PBO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKB divergent transcript","termid":"PBO:0051506"}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: GO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta2 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-4 complex","synonyms":[{"name":"laminin-221 complex","type":"exact"}],"termid":"GO:0005609"}


id: GO:0045874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sevenless signaling pathway","termid":"GO:0045501"},{"relation_name":"positively_regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sevenless signaling pathway","synonyms":[{"name":"activation of sevenless signaling pathway","type":"narrow"},{"name":"positive regulation of sev signaling pathway","type":"exact"},{"name":"positive regulation of sevenless signalling pathway","type":"exact"},{"name":"stimulation of sevenless signaling pathway","type":"narrow"},{"name":"up regulation of sevenless signaling pathway","type":"exact"},{"name":"up-regulation of sevenless signaling pathway","type":"exact"},{"name":"upregulation of sevenless signaling pathway","type":"exact"}],"termid":"GO:0045874"}


id: PBO:0059960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 5","termid":"PBO:0059960"}


id: PBO:0012589
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RASA1","termid":"PBO:0012589"}


id: GO:0034397
data:
  {"annotated_genes":["SJAG_05260","SJAG_03092","SJAG_03287","SJAG_01538","SJAG_03685","SJAG_03048","SJAG_01584","SJAG_01601","SJAG_01837","SJAG_03680","SJAG_01777","SJAG_03299","SJAG_05196","SJAG_01067","SJAG_00756","SJAG_01263","SJAG_05226"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112732],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[85894,102011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[85895,95995,83553,101164,98902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[113596,102012,112008,113732,92819,83554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[102013,110059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[85896,101165,95216,112927,102014],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0044820"},{"annotations":[98456],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904537"},{"annotations":[85151,112485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034398"}]},"cv_name":"biological_process","definition":"Any process in which a telomere is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01067":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01584":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03299":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"telomere localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomere localisation","type":"exact"}],"termid":"GO:0034397","terms_by_termid":{"GO:0032121":null,"GO:0034398":null,"GO:0044820":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null,"GO:0120110":null,"GO:1904537":null}}


id: PBO:0056620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trans-2-enoyl-CoA reductase","termid":"PBO:0056620"}


id: FYPO:0002165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 3'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"}


id: GO:0043828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylaminomethyl-2-thiouridine + selenophosphate = 5-methylaminomethyl-2-selenouridine + phosphate (at the wobble position in tRNA).","definition_xrefs":["RHEA:42716","PMID:14594807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"tRNA 2-selenouridine synthase activity","secondary_identifiers":["EC:2.9.1.3","MetaCyc:RXN0-2281"],"termid":"GO:0043828"}


id: PBO:0071666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 7","termid":"PBO:0071666"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: PBO:0062604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Q member 1","termid":"PBO:0062604"}


id: PR:O74755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pst3 gene.","definition_xrefs":["UniProtKB:O74755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.16c","synonyms":[{"name":"SIN3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pst3","type":"exact"}],"termid":"PR:O74755"}


id: PR:Q9P7H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C105.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.03c","synonyms":[{"name":"Spom972h-SPAC105.03c","type":"exact"}],"termid":"PR:Q9P7H9"}


id: PBO:0069996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1291, pseudogene","termid":"PBO:0069996"}


id: GO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catecholamine metabolic process","synonyms":[{"name":"catecholamine metabolism","type":"exact"}],"termid":"GO:0006584"}


id: GO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a caspase family protein.","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"caspase binding","termid":"GO:0089720"}


id: PBO:0054960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2374","termid":"PBO:0054960"}


id: PBO:0059596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 8","termid":"PBO:0059596"}


id: GO:0048722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior cibarial plate over time, from their formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior cibarial plate development","termid":"GO:0048722"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: PBO:0085401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in protoprophyrin and heme transport; roles in the uptake of protoprophyrin IX and the efflux of heme; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of proteins","termid":"PBO:0085401"}


id: PBO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0085013"}


id: GO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pseudopodium","secondary_identifiers":["Wikipedia:Pseudopod"],"synonyms":[{"name":"axopodium","type":"narrow"},{"name":"lobopodium","type":"narrow"},{"name":"pseudopod","type":"exact"},{"name":"pseudopodial protrusion","type":"exact"},{"name":"reticulopodium","type":"narrow"}],"termid":"GO:0031143"}


id: PBO:0028904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028904"}


id: GO:1901270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipooligosaccharide.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide catabolic process","synonyms":[{"name":"lipooligosaccharide breakdown","type":"exact"},{"name":"lipooligosaccharide catabolism","type":"exact"},{"name":"lipooligosaccharide degradation","type":"exact"}],"termid":"GO:1901270"}


id: PBO:0040480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN2 antisense RNA","termid":"PBO:0040480"}


id: GO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial chromosome packaging","synonyms":[{"name":"mitochondrial DNA packaging","type":"exact"}],"termid":"GO:0090139"}


id: FYPO:0003380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of the first meiotic nuclear division, in which homologous chromosomes are normally paired and segregated from each other, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased frequency of meiosis","termid":"FYPO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased frequency of meiosis I","synonyms":[{"name":"decreased frequency of first meiotic nuclear division","type":"exact"},{"name":"decreased meiosis I","type":"exact"},{"name":"meiosis I: decreased frequency","type":"exact"},{"name":"reduced frequency of meiosis I","type":"exact"}],"termid":"FYPO:0003380"}


id: PBO:0062187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily P member 1 pseudogene","termid":"PBO:0062187"}


id: PBO:0070267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 2","termid":"PBO:0070267"}


id: GO:0097329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimetabolite stimulus. An antimetabolite is a substance which is structurally similar to a metabolite but which competes with it or replaces it, and so prevents or reduces its normal utilization.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antimetabolite","termid":"GO:0097329"}


id: GO:1901259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any rRNA processing that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"chloroplast rRNA processing","termid":"GO:1901259"}


id: PBO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tea1 (predicted)","termid":"PBO:0002096"}


id: PBO:0072544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 74","termid":"PBO:0072544"}


id: PBO:0039619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R overlapping transcript 1","termid":"PBO:0039619"}


id: GO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.","definition_xrefs":["PMID:15156179","PMID:8497254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"core-binding factor complex","synonyms":[{"name":"AML1 complex","type":"narrow"},{"name":"CBF complex","type":"exact"},{"name":"PEPB2 complex","type":"narrow"}],"termid":"GO:0016513"}


id: GO:0090596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["ISBN:978-0199210893","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ morphogenesis","termid":"GO:0090596"}


id: GO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B- or T cell receptor to augment B- or T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte costimulation","synonyms":[{"name":"lymphocyte co-stimulation","type":"exact"}],"termid":"GO:0031294"}


id: GO:1903677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"regulation of cap-independent translational initiation","termid":"GO:1903677"}


id: PBO:0042819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide transporter 1","termid":"PBO:0042819"}


id: PBO:0005665
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.5.3","termid":"PBO:0005665"}


id: PBO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2A","termid":"PBO:0061771"}


id: GO:0031229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear inner membrane (obsolete GO:0031229)","synonyms":[{"name":"intrinsic to nuclear inner membrane","type":"narrow"}],"termid":"GO:0031229"}


id: PBO:0048601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ghrelin opposite strand/antisense RNA","termid":"PBO:0048601"}


id: PBO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 38","termid":"PBO:0047399"}


id: FYPO:0005940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the replicative lifespan of a cell population, i.e. the number of divisions cells in the population undergo before death, is higher than normal.","definition_xrefs":["PMID:28139976","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased replicative lifespan","synonyms":[{"name":"increased cell population replicative lifespan","type":"exact"},{"name":"increased population replicative lifespan","type":"exact"}],"termid":"FYPO:0005940"}


id: PBO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf3","termid":"PBO:0004698"}


id: PBO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping exoribonuclease","termid":"PBO:0045660"}


id: PBO:0069706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 986, pseudogene","termid":"PBO:0069706"}


id: PBO:0088556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp1","termid":"PBO:0088556"}


id: FYPO:0002665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"}


id: PBO:0073147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog A, COPII coat complex component","termid":"PBO:0073147"}


id: GO:0140811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 2A L-arginyl (position 3)= histone 2A L-citrullyl (position 3) + NH4+, resulting in histone H2A citrullination at position 3.","definition_xrefs":["PMID:15823041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H2AR3 arginine deiminase activity","synonyms":[{"name":"H2A-R3 citrullination","type":"exact"},{"name":"histone H2A-R3 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H2A-R3 specific)","type":"exact"}],"termid":"GO:0140811"}


id: PBO:0057787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3085","termid":"PBO:0057787"}


id: PBO:0039344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 4","termid":"PBO:0039344"}


id: PBO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR22-4 (pseudogene)","termid":"PBO:0051359"}


id: GO:0065004
data:
  {"annotated_genes":["SJAG_04995","SJAG_04989","SJAG_01611","SJAG_04257","SJAG_04038","SJAG_01523","SJAG_03685","SJAG_03900","SJAG_02074","SJAG_03867","SJAG_02174","SJAG_04638","SJAG_01207","SJAG_03285","SJAG_00873","SJAG_05321","SJAG_01837","SJAG_03956","SJAG_00684","SJAG_01771","SJAG_01707","SJAG_04530","SJAG_01410","SJAG_03217","SJAG_00757","SJAG_00045","SJAG_02119","SJAG_01808","SJAG_02458","SJAG_01378","SJAG_04654","SJAG_04547","SJAG_04274","SJAG_02465","SJAG_02872","SJAG_02664","SJAG_01475","SJAG_03007","SJAG_03183","SJAG_00766","SJAG_03048","SJAG_02198","SJAG_02906","SJAG_02303","SJAG_01823","SJAG_03619","SJAG_02607","SJAG_04272","SJAG_03095","SJAG_02813","SJAG_03220","SJAG_00307","SJAG_03905","SJAG_00692","SJAG_02691","SJAG_00741","SJAG_01708","SJAG_00756","SJAG_04581","SJAG_03221","SJAG_05273","SJAG_02708","SJAG_00718","SJAG_04696","SJAG_03120","SJAG_04879","SJAG_02513","SJAG_00939","SJAG_02667","SJAG_02267","SJAG_00327","SJAG_02908","SJAG_04177","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111145,91577,110288,85819,114872,85014,88893,113731,103412,95227,112533,107245,109186,95475,114838,102422,86192,90798,98146,98989],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[106014,103414,111462,109636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[98274,103731,88770,106366,95143,96621,92273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[113488,101611,101539,109623,106384,86900,108251],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[99405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[93020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[103736,106372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[86567,106632,95509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[106633,99407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[113979],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[91176,92547,103805,110606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[105052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[85780,98460,112739],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[111251,85839],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[63313,91849,105224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[110863,92137,66483,83538,85415,86039,90249,113387,111444,84754,64258,84496,104566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[112272,99154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[95803,104191,112012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-DNA complex 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complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"DNA-protein complex assembly","type":"exact"}],"termid":"GO:0065004","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0001188":null,"GO:0006294":null,"GO:0006334":null,"GO:0010772":null,"GO:0034080":null,"GO:0045899":null,"GO:0051123":null,"GO:0051382":null,"GO:0070898":null,"GO:0140529":null,"GO:0140530":null,"GO:1902977":null,"GO:1902985":null,"GO:1905324":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1","termid":"PBO:0047820"}


id: PBO:0087631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the DSC ubiquitin ligase complex; protein of unknown function that localizes to the ER and vacuole lumen; overexpression affects endocytic protein trafficking; ortholog of fission yeast dsc3","termid":"PBO:0087631"}


id: GO:1900454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"positively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term synaptic depression","synonyms":[{"name":"activation of LTD","type":"related"},{"name":"activation of long term depression","type":"broad"},{"name":"activation of long term synaptic depression","type":"narrow"},{"name":"positive regulation of LTD","type":"related"},{"name":"positive regulation of long term depression","type":"broad"},{"name":"positive regulation of long term synaptic depression","type":"exact"},{"name":"up regulation of LTD","type":"related"},{"name":"up regulation of long term depression","type":"broad"},{"name":"up regulation of long term synaptic depression","type":"exact"},{"name":"up-regulation of LTD","type":"related"},{"name":"up-regulation of long term depression","type":"broad"},{"name":"up-regulation of long term synaptic depression","type":"exact"},{"name":"upregulation of LTD","type":"related"},{"name":"upregulation of long term depression","type":"broad"},{"name":"upregulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900454"}


id: PBO:0085898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to the nucleus; required for asymmetric localization of Kar9p during mitosis","termid":"PBO:0085898"}


id: GO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a pseudouridine synthetase by using base complementarity to guide site-specific pseudouridylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA pseudouridylation guide activity","termid":"GO:0030565"}


id: PBO:0029448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate-ammonia_ligase_activity","termid":"PBO:0029448"}


id: GO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTDP-rhamnose metabolic process","synonyms":[{"name":"dTDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0046383"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: PBO:0073704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI2 subunit of superkiller complex","termid":"PBO:0073704"}


id: GO:1905220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:10606160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"negatively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet formation","synonyms":[{"name":"down regulation of platelet extrusion","type":"exact"},{"name":"down regulation of platelet formation","type":"exact"},{"name":"down-regulation of platelet extrusion","type":"exact"},{"name":"down-regulation of platelet formation","type":"exact"},{"name":"downregulation of platelet extrusion","type":"exact"},{"name":"downregulation of platelet formation","type":"exact"},{"name":"inhibition of platelet extrusion","type":"narrow"},{"name":"inhibition of platelet formation","type":"narrow"},{"name":"negative regulation of platelet extrusion","type":"exact"}],"termid":"GO:1905220"}


id: PBO:0059900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 23","termid":"PBO:0059900"}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.7"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: PBO:0027521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle","termid":"PBO:0027521"}


id: PBO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 2","termid":"PBO:0051930"}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: PBO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin A","termid":"PBO:0042998"}


id: PATO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased rate","synonyms":[{"name":"slow rate","type":"exact"}],"termid":"PATO:0000911"}


id: PATO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000737 functional value (obsolete PATO:0000737)","termid":"PATO:0000737"}


id: PBO:0041062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain testis associated pseudogene 1","termid":"PBO:0041062"}


id: GO:0007470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the prothoracic disc are generated and organized. This includes the transformation of a prothoracic imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult humerous and anterior spiracle.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"prothoracic disc development","termid":"GO:0035219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prothoracic disc morphogenesis","synonyms":[{"name":"prothoracic disc metamorphosis","type":"exact"}],"termid":"GO:0007470"}


id: PATO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is greater relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased distance","synonyms":[{"name":"long distance","type":"related"}],"termid":"PATO:0000374"}


id: GO:1900316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"negative regulation of pentasaccharide transport","termid":"GO:1900361"},{"relation_name":"negatively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltopentaose transport","synonyms":[{"name":"down regulation of maltopentaose transport","type":"exact"},{"name":"down-regulation of maltopentaose transport","type":"exact"},{"name":"downregulation of maltopentaose transport","type":"exact"},{"name":"inhibition of maltopentaose transport","type":"narrow"}],"termid":"GO:1900316"}


id: GO:0019771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"high-affinity IgG receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019771"}


id: PBO:0026904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body","termid":"PBO:0026904"}


id: GO:0019462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamine into fumarate, beginning with conversion of glutamine into glutamate catalyzed by the enzyme glutaminase (EC:3.5.1.2).","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine catabolic process to fumarate","termid":"GO:0019460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamine catabolic process to fumarate, using glutaminase","secondary_identifiers":["MetaCyc:GLUTAMINDEG-PWY"],"synonyms":[{"name":"glutamate catabolic process to fumarate, using glutaminase","type":"related"},{"name":"glutamine breakdown to fumarate, using glutaminase","type":"exact"},{"name":"glutamine degradation to fumarate, using glutaminase","type":"narrow"}],"termid":"GO:0019462"}


id: PBO:0071328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 5","termid":"PBO:0071328"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: PBO:0060617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 2","termid":"PBO:0060617"}


id: GO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin E","termid":"GO:0034695"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin E stimulus","termid":"GO:0071380"}


id: PBO:0050731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 17","termid":"PBO:0050731"}


id: PBO:0011474
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of dextrin to glucose is 7.6 (mM min-1 ml-2)","termid":"PBO:0011474"}


id: GO:0051699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-proline + O2 + H2O = L-delta1-pyrroline-5-carboxylate + H2O2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proline oxidase activity (obsolete GO:0051699)","termid":"GO:0051699"}


id: PBO:0055415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2845","termid":"PBO:0055415"}


id: RO:HOM0000014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves complex structures from which only a fraction of the elements that can be isolated are separately homologous.","definition_xrefs":["ISBN:0123195837","ISBN:978-0471984931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_partial_homology_relationship_with","synonyms":[{"name":"fractional homology","type":"exact"},{"name":"mixed homology","type":"related"},{"name":"modular homology","type":"related"},{"name":"partial correspondence","type":"related"},{"name":"partial homologous to","type":"exact"},{"name":"percent homology","type":"related"},{"name":"segmental homology","type":"exact"}],"termid":"RO:HOM0000014"}


id: GO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving any of the intermediate compounds involved in the urea cycle, a cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete urea cycle intermediate metabolic process (obsolete GO:0000051)","synonyms":[{"name":"urea cycle intermediate metabolic process","type":"exact"},{"name":"urea cycle intermediate metabolism","type":"exact"}],"termid":"GO:0000051"}


id: PBO:0066387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase","termid":"PBO:0066387"}


id: PBO:0059724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 32","termid":"PBO:0059724"}


id: GO:1903806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-isoleucine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"isoleucine transmembrane transport","termid":"GO:1903714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-isoleucine import across plasma membrane","secondary_identifiers":["GO:0090477","GO:0090476"],"synonyms":[{"name":"L-isoleucine import","type":"broad"},{"name":"L-isoleucine import into cell","type":"exact"},{"name":"isoleucine import","type":"broad"}],"termid":"GO:1903806"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: PBO:0062363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily W member 1 pseudogene","termid":"PBO:0062363"}


id: PBO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 2","termid":"PBO:0060936"}


id: PBO:0069473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 740, pseudogene","termid":"PBO:0069473"}


id: PBO:0028723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actomyosin_contractile_ring","termid":"PBO:0028723"}


id: PBO:0043996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone 1","termid":"PBO:0043996"}


id: _global:recombined_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombined_from","termid":"_global:recombined_from"}


id: PBO:0072018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 5","termid":"PBO:0072018"}


id: PBO:0051438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-22","termid":"PBO:0051438"}


id: PR:Q9P7W0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An optic atrophy 3 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12499:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPA3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.11","secondary_identifiers":["UniProtKB:Q9P7W0"],"synonyms":[{"name":"Spom972h-OPA3","type":"exact"}],"termid":"PR:Q9P7W0"}


id: GO:0140900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(in) + HCO3-(out) = chloride(out) + HCO3-(in).","definition_xrefs":["PMID:10428871","RHEA:72203","PMID:16606687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"bicarbonate:monoatomic anion antiporter activity","termid":"GO:0140829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"chloride:bicarbonate antiporter activity","secondary_identifiers":["TC:2.A.53.2.18"],"synonyms":[{"name":"bicarbonate:chloride antiporter activity","type":"exact"},{"name":"chloride:hydrogencarbonate antiporter activity","type":"exact"}],"termid":"GO:0140900"}


id: PBO:0071408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 14","termid":"PBO:0071408"}


id: GO:1905622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leaf development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"negatively_regulates","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leaf development","synonyms":[{"name":"down regulation of leaf development","type":"exact"},{"name":"down-regulation of leaf development","type":"exact"},{"name":"downregulation of leaf development","type":"exact"},{"name":"inhibition of leaf development","type":"narrow"}],"termid":"GO:1905622"}


id: GO:0017070
data:
  {"annotated_genes":["SJAG_04497","SJAG_04898","SJAG_03070","SJAG_00531","SJAG_04117"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89049,92947,94125,104612,113268],"is_not":false,"summary":null,"term":"GO:0017070"}]},"cv_name":"molecular_function","definition":"Binding to a U6 small nuclear RNA (U6 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00531":null,"SJAG_03070":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017070","terms_by_termid":{"GO:0017070":null}}


id: GO:0106048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of acetylspermadine by the removal of acetyl groups.","definition_xrefs":["PMID:28516954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine deacetylation","termid":"GO:0106047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine deacetylation","synonyms":[{"name":"N8-acetylspermidine deacetylation","type":"exact"}],"termid":"GO:0106048"}


id: GO:0140366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-stoichiometric protein complex formed by several galectins crosslinking glycosylated ligands to form a dynamic lattice. The galectin lattice modulates receptor kinase signaling and the functionality of membrane receptors, by regulating the diffusion, compartmentalization and endocytosis of plasma membrane glycoproteins and glycolipids.","definition_xrefs":["PMID:26092931","PMID:28893908","PMID:30951647","PMID:19021578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"galectin lattice","termid":"GO:0140366"}


id: GO:0033264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevins, SNAP25 or syntaxin. No detected action on small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bontoxilysin activity (obsolete GO:0033264)","synonyms":[{"name":"BoNT","type":"related"},{"name":"bontoxilysin activity","type":"exact"},{"name":"botulinum neurotoxin activity","type":"exact"}],"termid":"GO:0033264"}


id: PBO:0108986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 10","termid":"PBO:0108986"}


id: PR:O13765
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lariat debranching enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12849:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lariat debranching enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.02c","secondary_identifiers":["UniProtKB:O13765"],"synonyms":[{"name":"SPAC17A5.02c","type":"related"},{"name":"Spom972h-DBR1","type":"exact"}],"termid":"PR:O13765"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: PBO:0069805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1091, pseudogene","termid":"PBO:0069805"}


id: PBO:0027220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_sister_chromatid_separation","termid":"PBO:0027220"}


id: PBO:0089007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane potassium ion transmembrane transporter Trk1","termid":"PBO:0089007"}


id: GO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","termid":"GO:0031585"},{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0055085"],"is_obsolete":false,"name":"negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"down regulation of IP3 receptor activity","type":"exact"},{"name":"down-regulation of IP3 receptor activity","type":"exact"},{"name":"downregulation of IP3 receptor activity","type":"exact"},{"name":"inhibition of IP3 receptor activity","type":"narrow"},{"name":"negative regulation of IP3 receptor activity","type":"related"},{"name":"negative regulation of inositol 1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0031586"}


id: GO:0080044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group from UDP-glucose to the 7-hydroxy group of a quercetin molecule.","definition_xrefs":["PMID:15352060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"quercetin 7-O-glucosyltransferase activity","termid":"GO:0080044"}


id: GO:0015132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of prostaglandins from one side of a membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transmembrane transporter activity","termid":"GO:0071714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"prostaglandin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-879528","Reactome:R-HSA-5661188"],"synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"broad"}],"termid":"GO:0015132"}


id: PATO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000198 absolute consumption (obsolete PATO:0000198)","termid":"PATO:0000198"}


id: PBO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 40","termid":"PBO:0052748"}


id: GO:0006826
data:
  {"annotated_genes":["SJAG_02968","SJAG_02735","SJAG_04867","SJAG_04743","SJAG_02473","SJAG_04677","SJAG_02457","SJAG_04260","SJAG_01007","SJAG_04737","SJAG_04675","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94181,96568,109865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[109283,99883,91431,108860,60733,88550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[108861,99875,88555,88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[106853,61322,61566,106852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[106854,106855,61567,61323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"iron ion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015681","GO:0097286","GO:0033216","GO:0015684","GO:0015682"],"synonyms":[{"name":"ferric ion import","type":"narrow"},{"name":"ferric ion transport","type":"narrow"},{"name":"ferric iron import","type":"narrow"},{"name":"ferric iron transport","type":"narrow"},{"name":"ferric iron uptake","type":"narrow"},{"name":"ferrous ion transport","type":"narrow"},{"name":"ferrous iron transport","type":"narrow"},{"name":"iron ion import","type":"related"},{"name":"iron transport","type":"exact"}],"termid":"GO:0006826","terms_by_termid":{"GO:0015891":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0044718":null,"GO:0048250":null,"GO:0140466":null}}


id: PBO:0081659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 583","termid":"PBO:0081659"}


id: GO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["GOC:mtg_sensu","PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytosol pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045249"}


id: PBO:0076214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 1","termid":"PBO:0076214"}


id: GO:0009442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways by which allantoin is processed and converted to ureidoglycolate, and then into metabolically useful substrates. E. coli are able to utilize allantoin as a sole nitrogen source under anaerobic conditions by converting it to ureidoglycolate; this may be further metabolized to produce glyoxylate and thence 3-phosphoglycerate, or alternatively oxidized to oxolureate, which can converted into oxamate and carbamoylphosphate. This may then be further metabolized to CO2, NH4+ and ATP.","definition_xrefs":["MetaCyc:PWY0-41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allantoin catabolic process","termid":"GO:0000256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantoin assimilation pathway","synonyms":[{"name":"allantoin catabolic process via ureidoglycolate","type":"exact"},{"name":"allantoin catabolism via ureidoglycolate","type":"exact"},{"name":"allantoin degradation pathway","type":"related"}],"termid":"GO:0009442"}


id: PBO:0031025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_P-factor_in_growth_medium","termid":"PBO:0031025"}


id: PBO:0069472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 739, pseudogene","termid":"PBO:0069472"}


id: GO:0036490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","PMID:16835242","PMID:14676213","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036490"}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: GO:0006497
data:
  {"annotated_genes":["SJAG_02776","SJAG_06383","SJAG_03506","SJAG_03115","SJAG_03878","SJAG_03801","SJAG_02488","SJAG_04881","SJAG_01227","SJAG_02523","SJAG_01860","SJAG_05327","SJAG_04337","SJAG_04924","SJAG_05278","SJAG_01416","SJAG_02804","SJAG_03292","SJAG_00068","SJAG_06425","SJAG_06309","SJAG_02903","SJAG_00846","SJAG_02913","SJAG_03066","SJAG_03672","SJAG_00295","SJAG_05219","SJAG_04119","SJAG_04975","SJAG_00831","SJAG_04165"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88329,110016,83592,99795,87501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[94204,99125,99857,103618,92524,97684,87332,104654,94957,105998,108426,89634,107665,102785,89179,84802,96306,111276,113281,90615,112202,110853,94753,89088,85067,85681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061739"}]},"cv_name":"biological_process","definition":"The covalent attachment of lipid groups to an amino acid in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06309":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein lipidation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RESID:AA0059","RESID:AA0077","RESID:AA0078","RESID:AA0107","RESID:AA0159","RESID:AA0160","RESID:AA0161","RESID:AA0166","RESID:AA0307","RESID:AA0309","RESID:AA0316","RESID:AA0079","RESID:AA0308","RESID:AA0102","RESID:AA0162","RESID:AA0104","RESID:AA0103","RESID:AA0060","RESID:AA0080","RESID:AA0106","RESID:AA0163","RESID:AA0158","RESID:AA0223","RESID:AA0290","GO:0042050"],"synonyms":[{"name":"lipid:protein modification","type":"exact"},{"name":"protein amino acid lipidation","type":"exact"}],"termid":"GO:0006497","terms_by_termid":{"GO:0006506":null,"GO:0016255":null,"GO:0061739":null}}


id: GO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a pyrimidine 5'-nucleotide = ribose-5-phosphate + a pyrimidine.","definition_xrefs":["MetaCyc:3.2.2.10-RXN","EC:3.2.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"pyrimidine-5'-nucleotide nucleosidase activity","secondary_identifiers":["RHEA:13425"],"synonyms":[{"name":"Pyr5N activity","type":"related"},{"name":"pyrimidine nucleotide N-ribosidase activity","type":"related"},{"name":"pyrimidine-5'-nucleotide phosphoribo(deoxyribo)hydrolase activity","type":"related"}],"termid":"GO:0047405"}


id: GO:0045480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + O2 = D-galacto-hexodialdose + hydrogen peroxide.","definition_xrefs":["EC:1.1.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactose oxidase activity","secondary_identifiers":["MetaCyc:GALACTOSE-OXIDASE-RXN","RHEA:24160"],"synonyms":[{"name":"D-galactose oxidase activity","type":"related"},{"name":"D-galactose:oxygen 6-oxidoreductase activity","type":"related"},{"name":"beta-galactose oxidase activity","type":"related"}],"termid":"GO:0045480"}


id: FYPO:0006162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin","termid":"FYPO:0006163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during meiosis I","synonyms":[{"name":"normal protein localisation to chromatin during meiosis I","type":"exact"},{"name":"normal protein localization to chromatin during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006162"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: GO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl","PMID:18305167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of viral release by host","secondary_identifiers":["GO:1902187"],"synonyms":[{"name":"down regulation of release of virus from host","type":"exact"},{"name":"down regulation of viral exit","type":"exact"},{"name":"down regulation of viral release","type":"exact"},{"name":"down regulation of viral release from host cell","type":"exact"},{"name":"down regulation of viral shedding","type":"exact"},{"name":"down-regulation of release of virus from host","type":"exact"},{"name":"down-regulation of viral exit","type":"exact"},{"name":"down-regulation of viral release","type":"exact"},{"name":"down-regulation of viral release from host cell","type":"exact"},{"name":"down-regulation of viral shedding","type":"exact"},{"name":"downregulation of release of virus from host","type":"exact"},{"name":"downregulation of viral exit","type":"exact"},{"name":"downregulation of viral release","type":"exact"},{"name":"downregulation of viral release from host cell","type":"exact"},{"name":"downregulation of viral shedding","type":"exact"},{"name":"inhibition of release of virus from host","type":"exact"},{"name":"inhibition of viral exit","type":"exact"},{"name":"inhibition of viral release","type":"exact"},{"name":"inhibition of viral release from host cell","type":"narrow"},{"name":"inhibition of viral shedding","type":"exact"},{"name":"negative regulation by host of viral release from host cell","type":"exact"},{"name":"negative regulation of release of virus from host","type":"exact"},{"name":"negative regulation of viral exit","type":"exact"},{"name":"negative regulation of viral release","type":"exact"},{"name":"negative regulation of viral release from host cell","type":"exact"},{"name":"negative regulation of viral shedding","type":"exact"}],"termid":"GO:0044790"}


id: PBO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3 (predicted)","termid":"PBO:0002406"}


id: PBO:0049999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator","termid":"PBO:0049999"}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: PBO:0058048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4269","termid":"PBO:0058048"}


id: PBO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6","termid":"PBO:0012571"}


id: SO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinous stretch of DNA that encompass all the TFRSs that regulate a promoter.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_collection","synonyms":[{"name":"TFRS collection","type":"exact"},{"name":"transcription factor regulatory site collection","type":"exact"}],"termid":"SO:0002297"}


id: GO:1902165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902229"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902253"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902165"}


id: FYPO:0005886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more heat shock elements (HSEs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription from HSE promoter","synonyms":[{"name":"expression of Hsf1 target genes increased","type":"related"},{"name":"increased transcription from HSE promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from HSE promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0005886"}


