# terms

id: PBO:0056104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 9, pseudogene","termid":"PBO:0056104"}


id: FYPO:0007785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the meiotic cell cycle is arrested at the G2/MI phase transition. Cells arrested at the G2/MI transition down-even in the presence of nutrients, in contrast with arrest at the mitotic G2/M transition, where cells continue to grow.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in meiosis II","termid":"FYPO:0002223"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"abolished growth during meiotic cell cycle arrest at G2/M1","type":"related"}],"termid":"FYPO:0007785"}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: PBO:0048660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 2","termid":"PBO:0048660"}


id: PBO:0075345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS Ras/Rac guanine nucleotide exchange factor 1","termid":"PBO:0075345"}


id: PBO:0054664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2070","termid":"PBO:0054664"}


id: GO:1902287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in axon guidance.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","termid":"GO:1902285"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in axon guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in axon chemotaxis","type":"related"},{"name":"semaphorin-plexin signaling pathway involved in axon growth cone guidance","type":"narrow"},{"name":"semaphorin-plexin signaling pathway involved in axon pathfinding","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in axon chemotaxis","type":"related"},{"name":"semaphorin-plexin signalling pathway involved in axon growth cone guidance","type":"narrow"},{"name":"semaphorin-plexin signalling pathway involved in axon guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in axon pathfinding","type":"exact"}],"termid":"GO:1902287"}


id: GO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of an enzyme.","definition_xrefs":["GOC:vw","GOC:tb","GOC:ebc","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catalytic activity","secondary_identifiers":["GO:0048554"],"synonyms":[{"name":"activation of enzyme activity","type":"narrow"},{"name":"activation of metalloenzyme activity","type":"narrow"},{"name":"positive regulation of enzyme activity","type":"exact"},{"name":"positive regulation of metalloenzyme activity","type":"narrow"},{"name":"stimulation of enzyme activity","type":"narrow"},{"name":"stimulation of metalloenzyme activity","type":"narrow"},{"name":"up regulation of enzyme activity","type":"exact"},{"name":"up regulation of metalloenzyme activity","type":"narrow"},{"name":"up-regulation of enzyme activity","type":"exact"},{"name":"up-regulation of metalloenzyme activity","type":"narrow"},{"name":"upregulation of enzyme activity","type":"exact"},{"name":"upregulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0043085"}


id: MOD:01258
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site C","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01258"}


id: PBO:0077242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 3","termid":"PBO:0077242"}


id: GO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurohypophysis are generated and organized. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"neurohypophysis development","termid":"GO:0021985"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis morphogenesis","synonyms":[{"name":"neurophysis morphogenesis","type":"exact"},{"name":"posterior pituitary gland morphogenesis","type":"exact"},{"name":"posterior pituitary morphogenesis","type":"exact"}],"termid":"GO:0048848"}


id: GO:2000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000733"}


id: PBO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase (predicted)","termid":"PBO:0000141"}


id: FYECO:0000223
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1NM-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-NM-PP1","synonyms":[{"name":"+ 1NM-PP1","type":"exact"}],"termid":"FYECO:0000223"}


id: PBO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity (predicted)","termid":"PBO:0001316"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: GO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BRE RNA element (Bruno response element).","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BRE binding","termid":"GO:0042835"}


id: PBO:0051870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 2","termid":"PBO:0051870"}


id: GO:0030955
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94371],"is_not":false,"summary":null,"term":"GO:0030955"}]},"cv_name":"molecular_function","definition":"Binding to a potassium ion (K+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"potassium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"K ion binding","type":"exact"}],"termid":"GO:0030955","terms_by_termid":{"GO:0030955":null}}


id: GO:0010127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions using mycothiol to convert an alkylating agent to an S-conjugate of mycothiol. The latter is cleaved to release mercapturic acid which is excreted from the cell.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"mycothiol-dependent detoxification","secondary_identifiers":["MetaCyc:PWY1G-1","MetaCyc:PWY1G-170"],"synonyms":[{"name":"mycothiol-dependent detoxification of alkylating agent","type":"narrow"}],"termid":"GO:0010127"}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: PBO:0064323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 5","termid":"PBO:0064323"}


id: GO:1904038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:kom","GOC:TermGenie","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of iron export across plasma membrane","synonyms":[{"name":"regulation of ferrous iron export","type":"narrow"},{"name":"regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904038"}


id: GO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002583"}


id: PR:Q9Y7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03309","PANTHER:PTHR11937:SF16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.10","secondary_identifiers":["UniProtKB:Q9Y7X8"],"synonyms":[{"name":"Spom972h-ACTR5","type":"exact"}],"termid":"PR:Q9Y7X8"}


id: PBO:0074031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 18 pseudogene 1","termid":"PBO:0074031"}


id: PBO:0063999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 33","termid":"PBO:0063999"}


id: PBO:0071442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 48","termid":"PBO:0071442"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["PMID:17535911","GOC:mcc","PMID:19049972"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: PBO:0090776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein Meu6","termid":"PBO:0090776"}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: PR:Q09728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cuf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-binding regulatory protein cuf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.11c","synonyms":[{"name":"Spom972h-cuf1","type":"exact"}],"termid":"PR:Q09728"}


id: GO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PMID:8611516","RESID:AA0352"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine (obsolete GO:0050743)","termid":"GO:0050743"}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: PBO:0067051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 72, pseudogene","termid":"PBO:0067051"}


id: PBO:0086116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication","termid":"PBO:0086116"}


id: PBO:0050144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3","termid":"PBO:0050144"}


id: PBO:0066864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 164","termid":"PBO:0066864"}


id: PBO:0086912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YML133C contains an intron","termid":"PBO:0086912"}


id: PBO:0041232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 54","termid":"PBO:0041232"}


id: FYPO:0006190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal during anaphase A.","definition_xrefs":["PMID:12426374","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle during anaphase","termid":"FYPO:0004438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000120","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"long mitotic spindle during anaphase A","synonyms":[{"name":"elongated mitotic spindle during anaphase A","type":"exact"},{"name":"increased mitotic spindle length during anaphase A","type":"exact"},{"name":"long bipolar mitotic spindle during anaphase A","type":"exact"},{"name":"long mitotic spindle during anaphase A during vegetative growth","type":"exact"},{"name":"long mitotic spindles during anaphase A","type":"exact"},{"name":"long spindle during anaphase A of mitosis","type":"exact"},{"name":"long spindle during mitotic anaphase A","type":"exact"}],"termid":"FYPO:0006190"}


id: GO:0015539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexuronate(out) + cation(out) = hexuronate(in) + cation(in). The hexuronate may be glucuronate or galacturonate.","definition_xrefs":["TC:2.A.1.14.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"hexuronate:monoatomic cation symporter activity","synonyms":[{"name":"hexuronate (glucuronate/galacturonate) porter activity","type":"narrow"},{"name":"hexuronate porter activity","type":"related"},{"name":"hexuronate:cation symporter activity","type":"broad"}],"termid":"GO:0015539"}


id: GO:0006225
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111635],"is_not":false,"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009194"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP anabolism","type":"exact"},{"name":"UDP biosynthesis","type":"exact"},{"name":"UDP formation","type":"exact"},{"name":"UDP synthesis","type":"exact"}],"termid":"GO:0006225","terms_by_termid":{"GO:0006225":null}}


id: GO:0038190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a neuropilin protein on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:12852851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"neuropilin signaling pathway","termid":"GO:0038189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"VEGF-activated neuropilin signaling pathway","synonyms":[{"name":"VEGF-Npn-1 signaling","type":"exact"},{"name":"vascular endothelial growth factor-activated neuropilin signaling pathway","type":"exact"}],"termid":"GO:0038190"}


id: PBO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8B, pseudogene","termid":"PBO:0043758"}


id: PBO:0064275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H1","termid":"PBO:0064275"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: GO:0102307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + erythromycin C = S-adenosyl-L-homocysteine + erythromycin A + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"erythromycin C 3''-o-methyltransferase activity","secondary_identifiers":["RHEA:32647","MetaCyc:RXN-12923"],"termid":"GO:0102307"}


id: PBO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complemented by S. cerevisiae VAM7","termid":"PBO:0018122"}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: PBO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl cyclase-associated protein Cap1","termid":"PBO:0005129"}


id: GO:0031100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a lost or destroyed animal organ.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal organ regeneration","termid":"GO:0031100"}


id: GO:0002926
data:
  {"annotated_genes":["SJAG_01418","SJAG_00579","SJAG_00235","SJAG_04452","SJAG_04756","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91571,96651,105564,106227,110048,114802],"is_not":false,"summary":null,"term":"GO:0002926"}]},"cv_name":"biological_process","definition":"The process whereby a wobble base uridine residue in a tRNA is modified to 5-methoxycarbonylmethyl-2-thiouridine.","definition_xrefs":["PMID:22768388","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00579":null,"SJAG_01418":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mcm5 modification","type":"exact"},{"name":"mcm5s2U34 biosynthesis","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"}],"termid":"GO:0002926","terms_by_termid":{"GO:0002926":null}}


id: GO:0031932
data:
  {"annotated_genes":["SJAG_01020","SJAG_00756","SJAG_04987","SJAG_04460","SJAG_03067","SJAG_01320","SJAG_00117"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62107,95463,97837,98807,102747,104641,114407],"is_not":false,"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.","definition_xrefs":["GOC:bf","GOC:jh","PMID:14736892","PMID:16469695","PMID:21548787","PMID:15780592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00756":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TORC2 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 2","type":"exact"},{"name":"TORC 2 complex","type":"exact"},{"name":"TORC2","type":"exact"},{"name":"mTORC2","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex","type":"exact"}],"termid":"GO:0031932","terms_by_termid":{"GO:0031932":null}}


id: PBO:0072090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 21","termid":"PBO:0072090"}


id: GO:0080099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + 2-oxoglutarate = 4-methylthio-2-oxobutyrate + L-glutamate.","definition_xrefs":["PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionine-oxo-acid transaminase activity","termid":"GO:0010326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-methionine:2-oxoglutarate aminotransferase activity","synonyms":[{"name":"L-methionine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080099"}


id: GO:1900493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:mengo_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"positive regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"activation of 4Fe-4S cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"activation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"positive regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"positive regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"up-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"up-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"upregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"upregulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900493"}


id: PBO:0030032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_transcription_by_glucose","termid":"PBO:0030032"}


id: GO:0021824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of cerebral cortex neuronal precursors tangentially through the cortex using interaction of the migrating cells with axons of other neurons.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration using cell-axon interactions","termid":"GO:0021824"}


id: PBO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 4","termid":"PBO:0061929"}


id: GO:0033433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AUU codon-amino acid adaptor activity","synonyms":[{"name":"ATT codon-amino acid adaptor activity","type":"exact"},{"name":"isoleucine tRNA","type":"related"}],"termid":"GO:0033433"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["GOC:BHF","GOC:mah","CHEBI:28757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: FYPO:0007424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which chromosomal truncations occur more frequently than in wild type cells.","definition_xrefs":["PMID:32355220","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased chromosomal truncation","synonyms":[{"name":"increased chromosomal truncation during mitotic cell cycle","type":"related"},{"name":"increased chromosomal truncation during vegetative growth","type":"exact"}],"termid":"FYPO:0007424"}


id: PBO:0061377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 37","termid":"PBO:0061377"}


id: GO:0060868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals that modulates the rate or extent of floral organ abscission.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission by small GTPase mediated signal transduction (obsolete GO:0060868)","termid":"GO:0060868"}


id: GO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell nuclear envelope","termid":"GO:0044199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear membrane","termid":"GO:0044200"}


id: PBO:0088054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein of the SUMO family; conjugated to lysine residues of target proteins; associates with transcriptionally active genes; regulates chromatid cohesion, chromosome segregation, APC-mediated proteolysis, DNA replication and septin ring dynamics; human homolog SUMO1 can complement yeast null mutant","termid":"PBO:0088054"}


id: PBO:0017473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-during_which_starts","termid":"PBO:0017473"}


id: PATO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000679 temporal value (obsolete PATO:0000679)","termid":"PATO:0000679"}


id: PBO:0054377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1773","termid":"PBO:0054377"}


id: GO:0051757
data:
  {"annotated_genes":["SJAG_04457","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106255,89984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The process in which sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai","PMID:16325576","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiotic sister chromatid separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic sister chromatid resolution","type":"exact"}],"termid":"GO:0051757","terms_by_termid":{"GO:0051755":null}}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: GO:0031560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the neck of a fungal bud before and during cytokinesis.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cellular bud neck polarisome","termid":"GO:0031560"}


id: PBO:0038684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 3","termid":"PBO:0038684"}


id: GO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + m7G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppRm-RNA. R may be guanosine or adenosine.","definition_xrefs":["EC:2.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"mRNA (nucleoside-2'-O-)-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9684032","MetaCyc:2.1.1.57-RXN","Reactome:R-HSA-9684033","Reactome:R-HSA-9694499","Reactome:R-HSA-9834003","Reactome:R-HSA-9694521","Reactome:R-HSA-9694721","Reactome:R-HSA-9684030"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (adenosine-2'-O-)-methyltransferase activity","type":"related"},{"name":"messenger RNA (nucleoside-2'-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate nucleoside 2'-methyltransferase activity","type":"related"}],"termid":"GO:0004483"}


id: PBO:0068335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 43","termid":"PBO:0068335"}


id: GO:1905576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GT1b.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ganglioside GT1b binding","termid":"GO:1905576"}


id: PBO:0054524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1924","termid":"PBO:0054524"}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: PBO:0112610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation protein Mug56","termid":"PBO:0112610"}


id: PBO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p21.2)","termid":"PBO:0047852"}


id: GO:0009438
data:
  {"annotated_genes":["SJAG_04674","SJAG_01596","SJAG_04726","SJAG_02988","SJAG_02960","SJAG_04404","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96405,108877,98878,88546,84127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[58905,101106,60499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:METHGLYUT-PWY"],"synonyms":[{"name":"methylglyoxal bypass","type":"narrow"},{"name":"methylglyoxal metabolism","type":"exact"},{"name":"methylglyoxal pathway","type":"narrow"}],"termid":"GO:0009438","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PR:Q9P7V8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphate carrier protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24089:SF22","PRO:DNx","OMA:SCHPO03484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphate carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.13c","secondary_identifiers":["UniProtKB:Q9P7V8"],"synonyms":[{"name":"Spom972h-SLC25A3","type":"exact"}],"termid":"PR:Q9P7V8"}


id: PBO:0067238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 309, pseudogene","termid":"PBO:0067238"}


id: PBO:0072528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 57","termid":"PBO:0072528"}


id: GO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine + H2O + O2 = glycolaldehyde + NH3 + H2O2.","definition_xrefs":["RHEA:18581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ethanolamine oxidase activity","secondary_identifiers":["MetaCyc:ETHANOLAMINE-OXIDASE-RXN","EC:1.4.3.8"],"synonyms":[{"name":"ethanolamine:oxygen oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047883"}


id: PBO:0088645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54","termid":"PBO:0088645"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: PBO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrent Microtubules when Overexpressed","termid":"PBO:0004317"}


id: GO:0034643
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98845],"is_not":false,"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location, by a process involving microtubules.","definition_xrefs":["GOC:mah","PMID:16306220","PMID:15979253","PMID:12972644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of mitochondrion localization, microtubule-mediated","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondrion localisation, microtubule-mediated","type":"exact"},{"name":"microtubule-mediated mitochondrion localization","type":"exact"},{"name":"mitochondrial localization, microtubule-mediated","type":"exact"}],"termid":"GO:0034643","terms_by_termid":{"GO:0034643":null}}


id: GO:1902903
data:
  {"annotated_genes":["SJAG_04982","SJAG_01993","SJAG_04703","SJAG_03455","SJAG_01943","SJAG_01894","SJAG_04522","SJAG_00279","SJAG_02700","SJAG_00521","SJAG_02566","SJAG_04312","SJAG_04100","SJAG_04479","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84411,114667,88611,88427,94985,110386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[86994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[97930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[103684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[97832,85958,86801,98822,101227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[110389,93825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["GOC:rl","PMID:23921388","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fibril organisation","type":"related"}],"termid":"GO:1902903","terms_by_termid":{"GO:0030833":null,"GO:0031117":null,"GO:0032231":null,"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0090663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the peptide neurotransmitter galanin binding to a cell surface receptor.","definition_xrefs":["PMID:25691535","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide signaling pathway","termid":"GO:0007218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"galanin-activated signaling pathway","synonyms":[{"name":"galanin signaling pathway","type":"related"},{"name":"galanin signalling pathway","type":"related"},{"name":"galanin-activated signalling pathway","type":"exact"}],"termid":"GO:0090663"}


id: GO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate.","definition_xrefs":["GOC:ai","PMID:11788602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan biosynthetic process","termid":"GO:0050650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan chain elongation","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050653"}


id: PBO:0082153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter that links synaptojanins to the cortical actin cytoskeleton; the synaptojanins are Inp52p and Inp53p","termid":"PBO:0082153"}


id: PBO:0072744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 like 2","termid":"PBO:0072744"}


id: GO:0046828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA import into nucleus","synonyms":[{"name":"regulation of RNA import into cell nucleus","type":"exact"},{"name":"regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046828"}


id: PBO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein Slm9","termid":"PBO:0004306"}


id: GO:0008625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"death receptor-mediated apoptosis","type":"narrow"},{"name":"induction of apoptosis via death domain receptors","type":"related"},{"name":"induction of apoptosis via death receptors","type":"exact"}],"termid":"GO:0008625"}


id: PBO:0083169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A","termid":"PBO:0083169"}


id: PBO:0029931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029931"}


id: GO:0035323
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intercellular bridge that connects the germline cells of a male cyst.","definition_xrefs":["PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline ring canal","termid":"GO:0045172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"male germline ring canal","synonyms":[{"name":"spermatocyte ring canal","type":"narrow"},{"name":"testicular ring canal","type":"narrow"}],"termid":"GO:0035323"}


id: MOD:01506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889","Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"},{"relation_name":"is_a","term_name":"mTRAQ reporter+balance reagent acylated residue","termid":"MOD:01863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"}],"termid":"MOD:01506"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0042380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD244 molecule","termid":"PBO:0042380"}


id: SO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that mediates protein-protein interaction and defines adaptor proteins for DDB1/cullin 4 ubiquitin ligases.","definition_xrefs":["PMID:19818632","PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_protein_contact","termid":"SO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"DDB_box","synonyms":[{"name":"DDB box","type":"exact"},{"name":"DDB-box","type":"exact"}],"termid":"SO:0001804"}


id: PBO:0068062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 367","termid":"PBO:0068062"}


id: GO:1905157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photosynthesis.","definition_xrefs":["GOC:TermGenie","PMID:7592491","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"positively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photosynthesis","synonyms":[{"name":"activation of photosynthesis","type":"narrow"},{"name":"up regulation of photosynthesis","type":"exact"},{"name":"up-regulation of photosynthesis","type":"exact"},{"name":"upregulation of photosynthesis","type":"exact"}],"termid":"GO:1905157"}


id: PBO:0074746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 105B","termid":"PBO:0074746"}


id: GO:0150047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"G protein-coupled neurotransmitter receptor activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential.","definition_xrefs":["PMID:11498050","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0150047"}


id: GO:0045281
data:
  {"annotated_genes":["SJAG_00260","SJAG_02398","SJAG_03920","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84957,85318,112816,109263],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005749"}]},"cv_name":"cellular_component","definition":"A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["InterPro:IPR000701","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"succinate dehydrogenase complex (ubiquinone)","termid":"GO:0045257"},{"relation_name":"part_of","term_name":"respiratory chain complex II","termid":"GO:0045273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"succinate dehydrogenase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045281","terms_by_termid":{"GO:0005749":null}}


id: PBO:0057367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-1","termid":"PBO:0057367"}


id: GO:0006746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the reduced form of flavin adenine dinucleotide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"FADH2 metabolic process","synonyms":[{"name":"FADH2 metabolism","type":"exact"},{"name":"reduced flavin adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0006746"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: GO:0103011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + beta-D-fructofuranose 6-phosphate = mannosylfructose-phosphate + GDP.","definition_xrefs":["EC:2.4.1.246","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"mannosylfructose-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-9935","RHEA:26039"],"termid":"GO:0103011"}


id: FYPO:0006458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0078135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 14/delta variable 4","termid":"PBO:0078135"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: PBO:0083860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl cysteine-carboxyl methyltransferase; mediates the carboxyl methylation step during C-terminal CAAX motif processing of a-factor and RAS proteins in the endoplasmic reticulum, localizes to the ER membrane","termid":"PBO:0083860"}


id: PBO:0080584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 7","termid":"PBO:0080584"}


id: GO:0061038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the uterus are generated and organized.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"uterus development","termid":"GO:0060065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterus morphogenesis","termid":"GO:0061038"}


id: FYPO:0006942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of lipid binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal lipid binding","termid":"FYPO:0006942"}


id: GO:0071664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains a catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["GOC:rl","PMID:14661054","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"catenin-TCF7L2 complex","synonyms":[{"name":"catenin-TCF4 complex","type":"exact"}],"termid":"GO:0071664"}


id: GO:0015517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + H+(out) = galactose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.9","TC:2.A.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"galactose:proton symporter activity","synonyms":[{"name":"galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:hydrogen symporter activity","type":"broad"}],"termid":"GO:0015517"}


id: GO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"metaxylem development","termid":"GO:0090058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaxylem development","termid":"GO:0090060"}


id: _global:paralogous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_to","termid":"_global:paralogous_to"}


id: PBO:0028444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0028444"}


id: PBO:0071433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 39","termid":"PBO:0071433"}


id: PBO:0042225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNT2 antisense RNA 1","termid":"PBO:0042225"}


id: PBO:0072476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 5","termid":"PBO:0072476"}


id: PBO:0078448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 1 (non-functional)","termid":"PBO:0078448"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: PBO:0078322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 4","termid":"PBO:0078322"}


id: GO:0097209
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.","definition_xrefs":["GOC:cjm","Wikipedia:Lamellar_granule"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"epidermal lamellar body","termid":"GO:0097209"}


id: PBO:0061002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein pseudogene 2","termid":"PBO:0061002"}


id: GO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polyubiquitinated proteins in a cell, including the movement of proteins between specific compartments or structures within a cell.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:14675537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polyubiquitinated protein transport","synonyms":[{"name":"polyubiquitylated protein transport","type":"exact"}],"termid":"GO:0070844"}


id: GO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methoxy-6-(all-trans-octaprenyl)phenol + H+ + NADPH + O2 = 2-methoxy-6-all-trans-octaprenyl-1,4-benzoquinol + H2O + NADP+.","definition_xrefs":["PMID:27822549","RHEA:29407","PMID:4572721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681"}


id: PBO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_reversal_relationship_with","termid":"PBO:0034123"}


id: PBO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034531"}


id: PBO:0080915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 4","termid":"PBO:0080915"}


id: _global:connects_on
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X connects_on Y, Z, R iff whenever Z is on a R, X is adjacent to a Y and adjacent to a Z.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connects_on","termid":"_global:connects_on"}


id: GO:0098530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","GOC:dos","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of strand invasion","termid":"GO:0060542"},{"relation_name":"positively_regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of strand invasion","synonyms":[{"name":"positive regulation of D-loop biosynthesis","type":"related"},{"name":"positive regulation of D-loop formation","type":"related"},{"name":"positive regulation of Rad51-mediated strand invasion","type":"exact"}],"termid":"GO:0098530"}


id: SO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a sequence that is regulated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated","termid":"SO:0000119"}


id: PBO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase deficiency","termid":"PBO:0025487"}


id: PBO:0091316
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP1","termid":"PBO:0091316"}


id: PBO:0058462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5191","termid":"PBO:0058462"}


id: FYPO:0000164
data:
  {"alleles_by_uniquename":{"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001971"},{"annotations":[115422,115423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006557"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal. Cell separation is the process of physically separating progeny cells after cytokinesis is complete, and involves enzymatic digestion of septum components.","definition_xrefs":["GO:0000920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02252":null,"SJAG_03143":null,"SJAG_03444":null},"genotype_count":3,"genotypes_by_uniquename":{"ace2delta":{"display_name":"ace2delta","display_uniquename":"ace2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02252:allele-1","expression":"Null"}]}]},"agn1delta":{"display_name":"agn1delta","display_uniquename":"agn1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03444:allele-1","expression":"Null"}]}]},"sep1delta":{"display_name":"sep1delta","display_uniquename":"sep1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03143:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis","references_by_uniquename":{"PMID:22300943":null,"PMID:24699070":null},"single_locus_annotated_genes":["SJAG_02252","SJAG_03143","SJAG_03444"],"single_locus_genotype_uniquenames":["ace2delta","sep1delta","agn1delta"],"synonyms":[{"name":"abnormal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation","type":"exact"},{"name":"abnormal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0000164","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001971":null,"FYPO:0006557":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0075311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 3","termid":"PBO:0075311"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["RHEA:10832","MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN","Reactome:R-HSA-8940388"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-16","termid":"PBO:0075053"}


id: PBO:0029507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_spore_with_abnormal_shape","termid":"PBO:0029507"}


id: GO:0008375
data:
  {"annotated_genes":["SJAG_02804","SJAG_04821","SJAG_04119","SJAG_04881","SJAG_03066","SJAG_02913","SJAG_06383","SJAG_00442","SJAG_03311","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100731,84854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[94774,94442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[89180,89089,104655,107666,113282,105999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_04119":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"acetylglucosaminyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5694487","Reactome:R-HSA-9694656","Reactome:R-HSA-8879117","Reactome:R-HSA-9683648"],"synonyms":[{"name":"GlcNAc transferase activity","type":"exact"}],"termid":"GO:0008375","terms_by_termid":{"GO:0004100":null,"GO:0004577":null,"GO:0017176":null}}


id: PBO:0088408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway ATPase Sec18","termid":"PBO:0088408"}


id: GO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["PMID:29150447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"chloramphenicol transmembrane transport","synonyms":[{"name":"chloramphenicol transport","type":"broad"}],"termid":"GO:0042892"}


id: GO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006281","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in meiotic gene conversion","termid":"GO:0010779"}


id: GO:0102906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (-)-7-epi-alpha-selinene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.86","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"7-epi-alpha-selinene synthase activity","secondary_identifiers":["RHEA:30383","MetaCyc:RXN-8609"],"termid":"GO:0102906"}


id: PBO:0080275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 38 pseudogene","termid":"PBO:0080275"}


id: PBO:0057010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 101-1","termid":"PBO:0057010"}


id: GO:0047575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-(carboxymethyl)-5-oxo-2,5-dihydro-2-furoate + H+ = 5-oxo-4,5-dihydro-2-furylacetate + CO2.","definition_xrefs":["EC:4.1.1.44","RHEA:23348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"4-carboxymuconolactone decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03470","MetaCyc:4-CARBOXYMUCONOLACTONE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4-carboxymonolactone carboxy-lyase activity","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase (4,5-dihydro-5-oxofuran-2-acetate-forming)","type":"related"},{"name":"4-carboxymuconolactone carboxy-lyase activity","type":"related"},{"name":"gamma-4-carboxymuconolactone decarboxylase activity","type":"related"}],"termid":"GO:0047575"}


id: PBO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-60","termid":"PBO:0051448"}


id: GO:0031865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP2 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EP2 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP2 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP2 receptor binding","type":"exact"}],"termid":"GO:0031865"}


id: GO:0047540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoate + NAD+ = 2-butenoate + NADH + H+.","definition_xrefs":["EC:1.3.1.31","MetaCyc:2-ENOATE-REDUCTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-enoate reductase activity","secondary_identifiers":["RHEA:10200"],"synonyms":[{"name":"butanoate:NAD+ delta2-oxidoreductase activity","type":"related"},{"name":"enoate reductase activity","type":"related"}],"termid":"GO:0047540"}


id: GO:0043570
data:
  {"annotated_genes":["SJAG_05237","SJAG_04816","SJAG_01419","SJAG_05180","SJAG_01832","SJAG_02226","SJAG_04671","SJAG_04855","SJAG_03898","SJAG_02748","SJAG_02187","SJAG_01050","SJAG_03997","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87858,96658,102130,103823,112503],"is_not":false,"summary":null,"term":"GO:0043570"},{"annotations":[92118,95367,113196,97249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043007"},{"annotations":[100501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045458"},{"annotations":[99313],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[111085,95447,98360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of DNA repeat elements.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_01419":null,"SJAG_01832":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"maintenance of DNA repeat elements","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043570","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:0043570":null,"GO:0045458":null,"GO:1902681":null}}


id: PBO:0052549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor C2","termid":"PBO:0052549"}


id: PR:O74859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt3 gene.","definition_xrefs":["UniProtKB:O74859","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.09c","synonyms":[{"name":"Hit family protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hnt3","type":"exact"}],"termid":"PR:O74859"}


id: GO:1900812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of helvolic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"helvolic acid biosynthetic process","synonyms":[{"name":"Fumigacin anabolism","type":"related"},{"name":"Fumigacin biosynthesis","type":"related"},{"name":"Fumigacin biosynthetic process","type":"related"},{"name":"Fumigacin formation","type":"related"},{"name":"Fumigacin synthesis","type":"related"},{"name":"helvolic acid anabolism","type":"exact"},{"name":"helvolic acid biosynthesis","type":"exact"},{"name":"helvolic acid formation","type":"exact"},{"name":"helvolic acid synthesis","type":"exact"}],"termid":"GO:1900812"}


id: GO:1905288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a vascular associated smooth muscle cell.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","PMID:26493107","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"VSMC apoptosis","type":"narrow"},{"name":"VSMC apoptotic process","type":"exact"},{"name":"vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905288"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: GO:0009955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which differences in cell differentiation along the adaxial/abaxial are generated. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial pattern specification","synonyms":[{"name":"adaxial/abaxial pattern formation","type":"related"}],"termid":"GO:0009955"}


id: PBO:0085469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydratase; catalyzes the conversion of prephanate to phenylpyruvate, which is a step in the phenylalanine biosynthesis pathway","termid":"PBO:0085469"}


id: PBO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 3 pseudogene 1","termid":"PBO:0043866"}


id: PBO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member A","termid":"PBO:0047079"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: PBO:0063762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHC2 antisense RNA 1","termid":"PBO:0063762"}


id: GO:0033194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroperoxide","termid":"GO:0033194"}


id: PBO:0042704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 3","termid":"PBO:0042704"}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: PBO:0048274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 10","termid":"PBO:0048274"}


id: PBO:0048949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 2","termid":"PBO:0048949"}


id: PBO:0109601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CR1 antisense RNA 1","termid":"PBO:0109601"}


id: PBO:0005680
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during stationary phase","termid":"PBO:0005680"}


id: GO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process in which a response to an angular or linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the inner ear and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular reflex","termid":"GO:0060005"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: PBO:0089895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron/zinc ion transmembrane transporter","termid":"PBO:0089895"}


id: PBO:0071272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL24 pseudogene 6","termid":"PBO:0071272"}


id: GO:2000755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"},{"relation_name":"is_a","term_name":"regulation of sphingomyelin catabolic process","termid":"GO:2000754"},{"relation_name":"positively_regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sphingomyelin catabolic process","synonyms":[{"name":"positive regulation of sphingomyelin breakdown","type":"exact"},{"name":"positive regulation of sphingomyelin catabolism","type":"exact"},{"name":"positive regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000755"}


id: FYPO:0007097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly takes place in one or more abnormal locations. An actin fusion focus normally forms during mating at the site where the two cells will fuse. Ectopic fusion foci often form near actin cortical patches, and may also have abnormal composition.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"ectopic actin fusion focus assembly","synonyms":[{"name":"ectopic actin fusion focus formation","type":"exact"},{"name":"mislocalized actin fusion focus assembly","type":"exact"}],"termid":"FYPO:0007097"}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["EC:2.4.1.159","MetaCyc:2.4.1.159-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: MOD:01779
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-(L-lysyl)-L-lysine by formation of an isopeptide bond between the carboxyl group of a free lysine and the N6-amino group of the peptidyl L-lysine.","definition_xrefs":["RESID:AA0530","PubMed:18201202","PubMed:20729861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-lysyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2,6-diaminohexanoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-(L-lysyl)-L-lysine","type":"exact"},{"name":"N6-(alpha-lysyl)-lysine","type":"exact"}],"termid":"MOD:01779"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: PBO:0077081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOPBP1 interacting checkpoint and replication regulator","termid":"PBO:0077081"}


id: PBO:0080975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 10","termid":"PBO:0080975"}


id: FYPO:0001064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glycine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycine import","termid":"FYPO:0001063"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased glycine import","synonyms":[{"name":"decreased glycine import across plasma membrane","type":"exact"},{"name":"decreased glycine import during mitotic cell cycle","type":"related"},{"name":"decreased glycine import during vegetative growth","type":"exact"},{"name":"decreased glycine import into cell","type":"exact"},{"name":"decreased glycine uptake","type":"exact"},{"name":"reduced glycine import","type":"exact"}],"termid":"FYPO:0001064"}


id: PBO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein coding overlap with adjacent gene","termid":"PBO:0001756"}


id: PBO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 3","termid":"PBO:0046322"}


id: PBO:0081235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19 pseudogene 1","termid":"PBO:0081235"}


id: PR:P79007
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator hap5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.02","synonyms":[{"name":"Spom972h-php5","type":"exact"}],"termid":"PR:P79007"}


id: PBO:0052291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDC1 antisense RNA 1","termid":"PBO:0052291"}


id: PBO:0091595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, similar to region downstream of rps13","termid":"PBO:0091595"}


id: GO:0032442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the NADPH-dependent 7-O-4' reduction of phenylcoumaran lignans to the corresponding diphenols; for example, catalysis of the reaction: dehydrodiconiferyl alcohol + NADPH + H+ = isodihydrodehydrodiconiferyl alcohol + NADP+.","definition_xrefs":["PMID:13129921","PMID:11030549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenylcoumaran benzylic ether reductase activity","synonyms":[{"name":"PCBER activity","type":"exact"}],"termid":"GO:0032442"}


id: GO:0061005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in kidney development","termid":"GO:0061005"}


id: GO:0120105
data:
  {"annotated_genes":["SJAG_03631","SJAG_03625","SJAG_03704","SJAG_03379","SJAG_01889","SJAG_02278","SJAG_04597","SJAG_00807","SJAG_03703","SJAG_01787","SJAG_00082","SJAG_02831","SJAG_03564","SJAG_00845","SJAG_02392","SJAG_03145","SJAG_00268"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84427,86114,86888,90508,91039,91948,92418,93305,97011,99783,102263,105131,106869,108370,109427,113909,113926],"is_not":false,"summary":null,"term":"GO:0120105"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring in between the proximal layer and the actin filament layer. This region contains the accessory protein network, some actin filaments and connections between the proximal layer and the actin filament layer.","definition_xrefs":["PMID:28914606","GOC:vw","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00268":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_02278":null,"SJAG_02392":null,"SJAG_02831":null,"SJAG_03145":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005938","GO:0070938","GO:0005575","GO:0015629","GO:0005737"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, intermediate layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, intermediate layer","type":"exact"}],"termid":"GO:0120105","terms_by_termid":{"GO:0120105":null}}


id: GO:0018826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = methanethiol + NH3 + 2-oxobutanoate.","definition_xrefs":["EC:4.4.1.11","RHEA:23800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"methionine gamma-lyase activity","secondary_identifiers":["MetaCyc:METHIONINE-GAMMA-LYASE-RXN","UM-BBD_reactionID:r0432"],"synonyms":[{"name":"L-methioninase activity","type":"related"},{"name":"L-methionine gamma-lyase activity","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating)","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"methioninase activity","type":"related"},{"name":"methionine dethiomethylase activity","type":"related"},{"name":"methionine lyase activity","type":"related"}],"termid":"GO:0018826"}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: GO:0000404
data:
  {"annotated_genes":["SJAG_02226","SJAG_01419","SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96665,102005,102138],"is_not":false,"summary":null,"term":"GO:0000404"}]},"cv_name":"molecular_function","definition":"Binding to a DNA segment containing a loop. A loop occurs when DNA contains a large insertion or deletion that causes a region of unpaired single-stranded DNA to loop out, while the rest of the DNA is in a paired double-stranded configuration.","definition_xrefs":["GOC:elh","PMID:16781730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"},{"relation_name":"is_a","term_name":"DNA insertion or deletion binding","termid":"GO:0032135"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heteroduplex DNA loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"loop DNA binding","type":"related"}],"termid":"GO:0000404","terms_by_termid":{"GO:0000404":null}}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["RHEA:12917","EC:3.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03820"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: PBO:0085598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in calcium homeostasis and exit from quiescence; required for proper trehalose levels during quiescence; may play a role in cell wall biosynthesis, mutants are hypersensitive to antifungal, Papulacandin B; null mutants have increased plasmid loss; interacts with Pdr5p","termid":"PBO:0085598"}


id: FYPO:0001988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a pH higher than that of standard S. pombe growth medium (abut 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth at high pH","synonyms":[{"name":"normal growth at high pH","type":"broad"},{"name":"normal vegetative cell population growth at high pH","type":"exact"}],"termid":"FYPO:0001988"}


id: PBO:0040419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit c pseudogene 4","termid":"PBO:0040419"}


id: PBO:0069593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 867, pseudogene","termid":"PBO:0069593"}


id: PBO:0029921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_squalene_level","termid":"PBO:0029921"}


id: PBO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family (predicted)","termid":"PBO:0002447"}


id: PBO:0066604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1 pseudogene 3","termid":"PBO:0066604"}


id: SO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of regions which overlap with minimal polymorphism to form a linear sequence.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path","synonyms":[{"name":"tiling path","type":"exact"}],"termid":"SO:0000472"}


id: GO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the glyoxysome. A glyoxysome is a microbody that contains the enzymes of the glyoxylate pathway.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"glyoxysome organization","synonyms":[{"name":"glyoxysome organisation","type":"exact"},{"name":"glyoxysome organization and biogenesis","type":"related"}],"termid":"GO:0010111"}


id: GO:0045891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0045891)","synonyms":[{"name":"negative regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0045891"}


id: PBO:0038887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCYAP receptor type I","termid":"PBO:0038887"}


id: GO:0072741
data:
  {"annotated_genes":["SJAG_04703","SJAG_02645","SJAG_02022","SJAG_00333","SJAG_02831","SJAG_04597","SJAG_03602","SJAG_04461","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91770],"is_not":false,"summary":null,"term":"GO:0072741"},{"annotations":[90512],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[94532],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[87248,101419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[114670,88429,106872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[104025],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905391"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the site of cell division.","definition_xrefs":["PMID:19756689","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00333":null,"SJAG_02022":null,"SJAG_02645":null,"SJAG_02831":null,"SJAG_03602":null,"SJAG_04461":null,"SJAG_04597":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell division site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell division site","type":"exact"}],"termid":"GO:0072741","terms_by_termid":{"GO:0071574":null,"GO:0072741":null,"GO:0120047":null,"GO:0140325":null,"GO:1904498":null,"GO:1905391":null}}


id: PBO:0054699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2108","termid":"PBO:0054699"}


id: GO:0038098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a bone morphogenetic protein (BMP) in the extracellular region, and inhibiting BMP signaling by preventing BMP from binding to its cell surface receptor.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:19855014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of BMP signaling pathway","termid":"GO:0030514"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of BMP from receptor via BMP binding","synonyms":[{"name":"extracellular sequestering of BMP","type":"broad"},{"name":"extracellular sequestering of bone morphogenetic protein","type":"broad"}],"termid":"GO:0038098"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: PBO:0069102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 349, pseudogene","termid":"PBO:0069102"}


id: GO:0140048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of manganese ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:25319704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"manganese ion export across plasma membrane","synonyms":[{"name":"manganese ion export from cell","type":"exact"}],"termid":"GO:0140048"}


id: PBO:0054546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1946","termid":"PBO:0054546"}


id: PBO:0054955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2369","termid":"PBO:0054955"}


id: PBO:0055558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2994","termid":"PBO:0055558"}


id: GO:0110001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bacterial protein complex that neutralises its own toxin by complexing the toxin with the antitoxin. The antitoxin can be either a protein or an RNA. The neutralising toxin-antitoxin complex also acts as a transcriptional repressor of the toxin-antitoxin operon.","definition_xrefs":["GOC:bhm","PMID:16109374","PMID:25093388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"toxin-antitoxin complex","termid":"GO:0110001"}


id: GO:0007017
data:
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id: GO:0018874
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id: GO:0140718
data:
  {"annotated_genes":["SJAG_03844","SJAG_02778","SJAG_03982","SJAG_01331","SJAG_04768","SJAG_02622","SJAG_01867","SJAG_03624","SJAG_01599","SJAG_01579","SJAG_01075","SJAG_03664","SJAG_03997","SJAG_00883","SJAG_02382","SJAG_00769","SJAG_00934","SJAG_04186","SJAG_02723","SJAG_04574","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90182,99309],"is_not":false,"summary":null,"term":"GO:0140718"},{"annotations":[102718],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[88178,108176,110488,103303,100175,109364,104232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[93295,114142,87965,113790,96384],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[114145,100275,86915,108178,106558,112601,83649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[102368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The compaction of chromatin into a conformation that is refactory to transcription but that be converted to euchromatin and allow transcription in specific contexts. These can be temporal (e.g., developmental states or specific cell-cycle stages), spatial (e.g., nuclear localization changes from the center to the periphery or vice versa due to exogenous factors/signals), or parental/heritable (e.g., monoallelic gene expression).","definition_xrefs":["PMID:17936700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00883":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01331":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02401":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fHC assembly","type":"exact"},{"name":"facultative heterochromatin assembly","type":"exact"}],"termid":"GO:0140718","terms_by_termid":{"GO:0000183":null,"GO:0061188":null,"GO:0140718":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: PBO:0040887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP8B antisense RNA 1","termid":"PBO:0040887"}


id: MOD:01306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-hexosaminyl-L-threonine.","definition_xrefs":["Unimod:454#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-hexosaminylated threonine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01306"}


id: PBO:0061602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUBP iron-sulfur cluster assembly factor, mitochondrial","termid":"PBO:0061602"}


id: GO:0043393
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91393,101211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein binding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043393","terms_by_termid":{"GO:1904530":null}}


id: GO:0016973
data:
  {"annotated_genes":["SJAG_04017","SJAG_01083","SJAG_04379","SJAG_03847","SJAG_04310","SJAG_01185","SJAG_02209","SJAG_04656","SJAG_04115","SJAG_01449","SJAG_00093","SJAG_04480","SJAG_02534","SJAG_04536","SJAG_00641","SJAG_01529","SJAG_00178","SJAG_01374","SJAG_01715","SJAG_03986","SJAG_04202","SJAG_00298","SJAG_03002","SJAG_04721","SJAG_04148","SJAG_02704","SJAG_04347","SJAG_01584","SJAG_05328","SJAG_00992"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68831,87068,88295,92637,93050,97470,97944,98046,98729,98828,100026,101806,102226,103705,104764,105930,106497,107186,107817,109316,110523,111055,111571,111864,112122,112378,112484,112631,114050,114948],"is_not":false,"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0010467","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"poly(A)+ mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) mRNA export from nucleus","type":"exact"},{"name":"poly(A)+ mRNA export from cell nucleus","type":"exact"},{"name":"poly(A)+ mRNA export out of nucleus","type":"exact"},{"name":"poly(A)+ mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"poly(A)+ mRNA-nucleus export","type":"exact"},{"name":"polyadenylated mRNA export from nucleus","type":"related"}],"termid":"GO:0016973","terms_by_termid":{"GO:0016973":null}}


id: PBO:0070234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 172 pseudogene","termid":"PBO:0070234"}


id: PBO:0031722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination","termid":"PBO:0031722"}


id: PBO:0038779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 2A","termid":"PBO:0038779"}


id: PBO:0049463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin A (MNS blood group)","termid":"PBO:0049463"}


id: PBO:0047597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHAD1 antisense RNA 1","termid":"PBO:0047597"}


id: PBO:0041124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7","termid":"PBO:0041124"}


id: FYPO:0001833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased phosphoglycerate mutase activity","termid":"FYPO:0001833"}


id: GO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD24, a CD marker and cell adhesion molecule that occurs on many B-lineage cells and mature granulocytes, and is involved in B cell activation and differentiation as well as T cell co-stimulation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD24 biosynthetic process","synonyms":[{"name":"CD24 anabolism","type":"exact"},{"name":"CD24 biosynthesis","type":"exact"},{"name":"CD24 formation","type":"exact"},{"name":"CD24 synthesis","type":"exact"}],"termid":"GO:0035724"}


id: FYPO:0005496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a lower extent than normal.","definition_xrefs":["PMID:26108447","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription from CRE promoter","synonyms":[{"name":"decreased transcription from CRE promoter during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CRE promoter during vegetative growth","type":"exact"},{"name":"expression of CRE target genes decreased","type":"related"},{"name":"reduced transcription from CRE promoter","type":"exact"}],"termid":"FYPO:0005496"}


id: PBO:0047624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL2 divergent transcript","termid":"PBO:0047624"}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: PBO:0055405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2835","termid":"PBO:0055405"}


id: GO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the force with which blood travels through the circulatory system that contributes to the acute phase response. The acute phase response occurs during the early phases of an infection and is marked by changes in the production of plasma proteins such as C-reactive protein.","definition_xrefs":["GOC:jal","ISBN:081533642X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"part_of","term_name":"acute-phase response","termid":"GO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure involved in acute-phase response","synonyms":[{"name":"blood pressure regulation during acute phase response","type":"related"},{"name":"regulation of systemic arterial blood pressure during acute phase response","type":"related"}],"termid":"GO:0002530"}


id: GO:0046977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TAP protein, transporter associated with antigen processing protein. TAP protein is a heterodimeric peptide transporter consisting of the subunits TAP1 and TAP2.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TAP binding","termid":"GO:0046977"}


id: PBO:0046791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EZR antisense RNA 1","termid":"PBO:0046791"}


id: PBO:0091419
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL7","termid":"PBO:0091419"}


id: GO:0019346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interconversion of homocysteine and cysteine via cystathionine. In contrast with enteric bacteria and mammals, Saccharomyces cerevisiae has two transsulfuration pathways employing two separate sets of enzymes.","definition_xrefs":["MetaCyc:PWY-801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"homoserine metabolic process","termid":"GO:0009092"},{"relation_name":"is_a","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"transsulfuration","secondary_identifiers":["Wikipedia:Transsulfuration_pathway"],"synonyms":[{"name":"homocysteine-cysteine interconversion","type":"narrow"},{"name":"transsulphuration","type":"exact"}],"termid":"GO:0019346"}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: GO:0061326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the renal tubule over time from its formation to the mature form. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule development","termid":"GO:0061326"}


id: GO:0075029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of a swollen tip at the growing end of a symbiont spore which usually flattens against the host cell surface prior to appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"},{"relation_name":"part_of","term_name":"initiation of appressorium formation","termid":"GO:0075025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of appressorium germ tube hook structure","synonyms":[{"name":"formation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"formation of symbiont germ tube hook structure for appressorium development","type":"exact"},{"name":"formation of symbiont germ tube hook structure on or near host","type":"related"},{"name":"symbiont germ tube hook structure formation on or near host","type":"exact"}],"termid":"GO:0075029"}


id: PBO:0004642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1 (predicted)","termid":"PBO:0004642"}


id: PBO:0079025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 8-1","termid":"PBO:0079025"}


id: PBO:0050079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group 20B","termid":"PBO:0050079"}


id: GO:0018765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis,cis-2-hydroxy-6-oxohept-2,4-dienoate + OH- = cis-2-hydroxypenta-2,4-dienoate + acetate.","definition_xrefs":["UM-BBD_reactionID:r0263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-6-oxohepta-2,4-dienoate hydrolase activity","secondary_identifiers":["MetaCyc:2-OH-6-OXOHEPTA-2-4-DIENOATE-HYDR-RXN","RHEA:59220"],"termid":"GO:0018765"}


id: GO:0042602
data:
  {"annotated_genes":["SJAG_01668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83865],"is_not":false,"summary":null,"term":"GO:0042602"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced riboflavin + NADP+ = riboflavin + NADPH + 2 H+.","definition_xrefs":["RHEA:19377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"riboflavin reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NADPH-DEHYDROGENASE-FLAVIN-RXN","KEGG_REACTION:R05707","EC:1.5.1.30"],"synonyms":[{"name":"FMN reductase (NADPH) activity","type":"related"},{"name":"NADPH dehydrogenase (riboflavin) activity","type":"related"},{"name":"NADPH-FMN reductase activity","type":"related"},{"name":"NADPH-dependent FMN reductase activity","type":"related"},{"name":"NADPH-riboflavin oxidoreductase activity","type":"exact"},{"name":"NADPH-riboflavin reductase activity","type":"related"},{"name":"NADPH-specific FMN reductase activity","type":"related"},{"name":"NADPH:riboflavin oxidoreductase activity","type":"related"},{"name":"flavin reductase activity","type":"related"},{"name":"reduced-riboflavin:NADP+ oxidoreductase activity","type":"related"},{"name":"riboflavin mononucleotide (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"riboflavin mononucleotide reductase activity","type":"broad"},{"name":"riboflavine mononucleotide reductase activity","type":"broad"}],"termid":"GO:0042602","terms_by_termid":{"GO:0042602":null}}


id: PBO:0067168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 221, pseudogene","termid":"PBO:0067168"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: GO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of B cell antigen processing and presentation","termid":"GO:0002622"},{"relation_name":"positively_regulates","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell antigen processing and presentation","synonyms":[{"name":"activation of B cell antigen processing and presentation","type":"narrow"},{"name":"positive regulation of B lymphocyte antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-cell antigen processing and presentation","type":"exact"},{"name":"positive regulation of B-lymphocyte antigen processing and presentation","type":"exact"},{"name":"stimulation of B cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of B cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of B cell antigen processing and presentation","type":"exact"},{"name":"upregulation of B cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002624"}


id: PR:P50537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mae1 gene.","definition_xrefs":["UniProtKB:P50537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.03","synonyms":[{"name":"SPAPB8E5.03","type":"related"},{"name":"Spom972h-mae1","type":"exact"},{"name":"malate permease (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:P50537"}


id: PBO:0083190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YLL066C","termid":"PBO:0083190"}


id: PBO:0051029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein like 1","termid":"PBO:0051029"}


id: PBO:0039890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP44 and MYOCD antisense RNA 1","termid":"PBO:0039890"}


id: FYPO:0006921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of gene conversion at replication fork barriers is decreased.","definition_xrefs":["PomBase:mah","PMID:28586299","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gene conversion during vegetative growth","termid":"FYPO:0000185"},{"relation_name":"is_a","term_name":"decreased DNA recombination at mitotic DNA replication fork barriers","termid":"FYPO:0006920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased gene conversion at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased gene conversion at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased gene conversion at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"reduced gene conversion at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006921"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: GO:1901486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Positive regulation of transcription factor catabolism that results in negative regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process (obsolete GO:1901486)","synonyms":[{"name":"negative regulation of SREBP signaling pathway by positive regulation of SREBP degradation","type":"narrow"},{"name":"negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by positive regulation of transcription factor catabolic process","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by positive regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901486"}


id: PBO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family transmembrane transporter (predicted)","termid":"PBO:0018209"}


id: PBO:0083660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized integral membrane protein; may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression","termid":"PBO:0083660"}


id: PBO:0072974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 5, pseudogene","termid":"PBO:0072974"}


id: GO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses ADPG pyrophosphorylase activity. In all organisms where it has been found, the complex is a tetramer. In bacteria, it is a homotetramer. In plants, the complex is a heterotetramer composed small and large subunits.","definition_xrefs":["GOC:tb","PMID:9680965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: GO:0019690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a pyrimidine deoxyribonucleoside is synthesized from another deoxyribopyrimidine nucleoside.","definition_xrefs":["ISBN:0471394831","GOC:mah","ISBN:0306444747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside interconversion","termid":"GO:0019689"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside interconversion","termid":"GO:0019690"}


id: FYPO:0000397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G1/S transition of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased duration of mitotic G1/S phase transition (obsolete FYPO:0000397)","synonyms":[{"name":"cell cycle progression through the G1/S phase transition: increased rate","type":"related"},{"name":"decreased duration of cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"decreased duration of mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"increased rate of cell cycle progression through mitotic G1/S phase transition","type":"related"},{"name":"reduced duration of mitotic G1/S phase transition","type":"exact"}],"termid":"FYPO:0000397"}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: GO:0140902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-glutamine(out) + Na+(out) = L-glutamine(in) + Na+(in).","definition_xrefs":["PMID:28416685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"alanine:sodium symporter activity","termid":"GO:0015655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-glutamine:sodium symporter activity","secondary_identifiers":["TC:2.A.18.6.13"],"synonyms":[{"name":"glutamine:sodium symporter activity","type":"exact"},{"name":"sodium:L-glutamine symporter activity","type":"exact"},{"name":"sodium:glutamine symporter activity","type":"exact"}],"termid":"GO:0140902"}


id: GO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve development","synonyms":[{"name":"AV valve development","type":"exact"}],"termid":"GO:0003171"}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: GO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the style over time, from its formation to the mature structure. The style is an elongated part of a carpel, or group of fused carpels, and it lies between the ovary and the stigma.","definition_xrefs":["PO:0009074","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"style development","termid":"GO:0048479"}


id: PBO:0091290
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM-like Enriched in Stalks","termid":"PBO:0091290"}


id: GO:0010245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of radial microtubular systems during male meiotic cytokinesis in plants.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"radial microtubular system formation","termid":"GO:0010245"}


id: SO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001053 nested_transposon (obsolete SO:0001053)","termid":"SO:0001053"}


id: GO:1904315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any transmitter-gated ion channel activity that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ionotropic neurotransmitter receptor activity involved in regulation of post-synaptic membrane potential","type":"narrow"},{"name":"ionotropic neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"narrow"},{"name":"transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"broad"}],"termid":"GO:1904315"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: PBO:0053964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1273","termid":"PBO:0053964"}


id: PBO:0040603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B melanoma antigen","termid":"PBO:0040603"}


id: PBO:0027958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine:NADP_4-dehydrogenase_activity","termid":"PBO:0027958"}


id: GO:2000956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cyclodextrin metabolic process","termid":"GO:2000954"},{"relation_name":"positively_regulates","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclodextrin metabolic process","synonyms":[{"name":"positive regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000956"}


id: PBO:0091375
data:
  {"annotation_feature_type":"gene","cv_name":"external_link","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the electron microscopy databank","termid":"PBO:0091375"}


id: GO:1901412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"activation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"activation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901412"}


id: PBO:0082287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF family GTPase; component of the COPII vesicle coat; required for transport vesicle formation during ER to Golgi protein transport; lowers membrane rigidity aiding vesicle formation; localizes to ER-mitochondrial contact sites where it enhances membrane curvature, thereby reducing contact size via its N-terminal amphipathic helix; regulates mitochondrial fission and fusion dynamics","termid":"PBO:0082287"}


id: PBO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Duo1","termid":"PBO:0004210"}


id: PBO:0052760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 52","termid":"PBO:0052760"}


id: PBO:0040904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 8","termid":"PBO:0040904"}


id: PBO:0060731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 2","termid":"PBO:0060731"}


id: PR:O60187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid4 gene.","definition_xrefs":["UniProtKB:O60187","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom972h-sid4","type":"exact"}],"termid":"PR:O60187"}


id: PBO:0048443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein family member 6","termid":"PBO:0048443"}


id: PBO:0030089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tetrapeptide_nitrogen_source","termid":"PBO:0030089"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: PR:O94373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.07","synonyms":[{"name":"Spom972h-atp4","type":"exact"}],"termid":"PR:O94373"}


id: PBO:0078515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 1","termid":"PBO:0078515"}


id: PBO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_apoptosis","termid":"PBO:0031589"}


id: GO:0003152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelial sheet bends along a linear axis, contributing to embryonic heart tube formation.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of an epithelial fold involved in embryonic heart tube formation","termid":"GO:0003152"}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["UniProtKB:O14320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: PATO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being not filed with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninflated","termid":"PATO:0002377"}


id: GO:1900151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","synonyms":[{"name":"regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900151"}


id: MOD:00160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to an N4-glycosyl-L-asparagine.","definition_xrefs":["PubMed:111247","RESID:AA0151#var","PubMed:5490222","PubMed:1694179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-glycosyl-L-asparagine","synonyms":[{"name":"N4GlycoAsn","type":"exact"}],"termid":"MOD:00160"}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["EC:1.1.1.278","RHEA:18137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-5alpha-steroid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.278-RXN","KEGG_REACTION:R07138"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: GO:0060600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epithelial cord, rod or tube bifurcates at its end.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of an epithelial terminal unit","synonyms":[{"name":"primary branching of an epithelium","type":"related"}],"termid":"GO:0060600"}


id: GO:0102168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenazine-1-carboxylate + S-adenosyl-L-methionine = 5-methylphenazine-1-carboxylate + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"5-methyl-phenazine-1-carboxylate N-methyltransferase activity","secondary_identifiers":["RHEA:49112","MetaCyc:RXN-11897"],"termid":"GO:0102168"}


id: GO:0046477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"glycosylceramide catabolic process","synonyms":[{"name":"glycosylceramide breakdown","type":"exact"},{"name":"glycosylceramide catabolism","type":"exact"},{"name":"glycosylceramide degradation","type":"exact"}],"termid":"GO:0046477"}


id: GO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell apoptotic process that occurs upon engagement of either the B cell receptor or CD40. Engagement of either receptor, but not both, leads to expression of fas or related receptors that make the B cell susceptible to fas-ligand mediated death.","definition_xrefs":["PMID:11032170","GOC:tfm","PMID:19300454","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced B cell apoptotic process","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated B cell apoptosis","type":"broad"},{"name":"activation-induced B cell apoptosis","type":"narrow"},{"name":"activation-induced B-cell apoptosis","type":"exact"},{"name":"activation-induced cell death of B cells","type":"exact"},{"name":"activation-induced cell death of B lymphocytes","type":"exact"},{"name":"activation-induced cell death of B-cells","type":"exact"},{"name":"activation-induced cell death of B-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0071948"}


id: PBO:0042434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 40","termid":"PBO:0042434"}


id: PBO:0050983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 52","termid":"PBO:0050983"}


id: PBO:0051860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 1 pseudogene 6","termid":"PBO:0051860"}


id: PBO:0085532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30A has a paralog, RPS30B, that arose from the whole genome duplication","termid":"PBO:0085532"}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: PBO:0064409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 5","termid":"PBO:0064409"}


id: PBO:0063067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU3F3 adjacent non-coding transcript 1","termid":"PBO:0063067"}


id: PBO:0069539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 809, pseudogene","termid":"PBO:0069539"}


id: PBO:0039230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT3 intronic transcript 1","termid":"PBO:0039230"}


id: FYPO:0004063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cytoplasm during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cytoplasm during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasm during salt stress","type":"exact"}],"termid":"FYPO:0004063"}


id: PBO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A5, pseudogene","termid":"PBO:0047002"}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: PBO:0058995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein","termid":"PBO:0058995"}


id: PBO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3 (predicted)","termid":"PBO:0002679"}


id: PR:O14098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.15","synonyms":[{"name":"CTD kinase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsk1","type":"exact"},{"name":"latrunculin sensitive kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14098"}


id: GO:0019284
data:
  {"annotated_genes":["SJAG_03614","SJAG_01404","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88757,95102,103073],"is_not":false,"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from S-adenosylmethionine.","definition_xrefs":["GOC:vw","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"},{"relation_name":"part_of","term_name":"S-adenosylmethionine cycle","termid":"GO:0033353"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01404":null,"SJAG_02689":null,"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-methionine salvage from S-adenosylmethionine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-methionine formation from S-adenosylmethionine","type":"exact"},{"name":"L-methionine synthesis from S-adenosylmethionine","type":"exact"}],"termid":"GO:0019284","terms_by_termid":{"GO:0019284":null}}


id: GO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a glial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:18723082","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell activation","termid":"GO:0061900"}


id: PATO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording not completed blocked passage or view.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"open","termid":"PATO:0000610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure incomplete","termid":"PATO:0000609"}


id: PATO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave quality inhering in a bearer by virtue of the bearer's forming or resembling an arch of an increased apical height.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"arched","termid":"PATO:0001594"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-arched","termid":"PATO:0002162"}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: GO:0140080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of an AP site 3' and 5' of the baseless site, generating a 3'-phosphate and a 5'-OH.","definition_xrefs":["PMID:2519777"],"gene_count":0,"genotype_count":0,"name":"obsolete class III/IV DNA-(apurinic or apyrimidinic site) endonuclease activity (obsolete GO:0140080)","secondary_identifiers":["Wikipedia:AP_endonuclease"],"synonyms":[{"name":"endonuclease III","type":"related"},{"name":"endonuclease IV","type":"related"}],"termid":"GO:0140080"}


id: PBO:0091315
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae TEM1","termid":"PBO:0091315"}


id: PBO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4B","termid":"PBO:0043032"}


id: GO:0052731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choline phosphate + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"phosphocholine phosphatase activity","secondary_identifiers":["MetaCyc:RXN-5647","Reactome:R-HSA-1483159","RHEA:10492","KEGG_REACTION:R06871"],"synonyms":[{"name":"3X11A","type":"related"},{"name":"PHOSPHO1","type":"related"},{"name":"phosphoethanolamine phosphohydrolase activity","type":"related"}],"termid":"GO:0052731"}


id: PBO:0047514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetuin B","termid":"PBO:0047514"}


id: GO:0030641
data:
  {"annotated_genes":["SJAG_01397","SJAG_00212","SJAG_01669","SJAG_02716","SJAG_00301","SJAG_01913","SJAG_00516","SJAG_02470","SJAG_05294","SJAG_01129","SJAG_02023","SJAG_00136","SJAG_04955","SJAG_04258","SJAG_01817","SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96587],"is_not":false,"summary":null,"term":"GO:0030641"},{"annotations":[109846,83851,94912,83852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[95004,97718,84191,98066,114753,85452,96093,99994,86290,85976,91763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal equilibrium of hydrogen ions (protons) within a cell or between a cell and its external environment.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"},{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular hydrogen ion homeostasis","type":"exact"},{"name":"proton homeostasis","type":"exact"}],"termid":"GO:0030641","terms_by_termid":{"GO:0007035":null,"GO:0030641":null,"GO:0051453":null}}


id: PBO:0039404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 5","termid":"PBO:0039404"}


id: PBO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 49","termid":"PBO:0048338"}


id: PBO:0056391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKAPK5 pseudogene 1","termid":"PBO:0056391"}


id: GO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule is the part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal straight tubule development","synonyms":[{"name":"S3 development","type":"exact"}],"termid":"GO:0072020"}


id: PBO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 2","termid":"PBO:0080016"}


id: PBO:0001858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase subunit Bgs2","termid":"PBO:0001858"}


id: GO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell cortex, the region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cortex part (obsolete GO:0044448)","termid":"GO:0044448"}


id: GO:0021755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature eurydendroid cell. Differentiation includes the processes involved in commitment of a neuroblast to a eurydendroid cell fate. A eurydendroid cell is an efferent neuron found in the cerebellar cortex of teleosts.","definition_xrefs":["PMID:15892096","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eurydendroid cell differentiation","termid":"GO:0021755"}


id: GO:0097587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In S. cerevisiae the complex consists of two subunits, Mlh1 and Mlh3.","definition_xrefs":["GOC:jd","PMID:10570173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MutLgamma complex","termid":"GO:0097587"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: PBO:0065961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 3","termid":"PBO:0065961"}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_03815","SJAG_00436","SJAG_02381","SJAG_04055","SJAG_01584","SJAG_04082","SJAG_04567","SJAG_01186","SJAG_03527","SJAG_03319","SJAG_04187","SJAG_03949","SJAG_04388","SJAG_02266","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100291,100399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[84983,88190,96612,101339,106073,111556,92581,86930,111555,91800,106074,101055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[112482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PBO:0084306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron transporter, mediates Fe2+ transport across inner mito membrane; mitochondrial carrier family member; active under low-iron conditions; may transport other cations; MRS3 has a paralog, MRS4, that arose from the whole genome duplication","termid":"PBO:0084306"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: GO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["RHEA:21836","EC:4.2.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"arabinonate dehydratase activity","secondary_identifiers":["MetaCyc:ARABINONATE-DEHYDRATASE-RXN","KEGG_REACTION:R03032"],"synonyms":[{"name":"D-arabinonate hydro-lyase (2-dehydro-3-deoxy-D-arabinonate-forming)","type":"related"},{"name":"D-arabinonate hydro-lyase activity","type":"related"}],"termid":"GO:0047675"}


id: PBO:0080507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0080507"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:jl","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: GO:0008165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrethroid resistance (obsolete GO:0008165)","synonyms":[{"name":"pyrethroid resistance","type":"exact"}],"termid":"GO:0008165"}


id: PBO:0040937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 8","termid":"PBO:0040937"}


id: PBO:0056101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6","termid":"PBO:0056101"}


id: PBO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.5","termid":"PBO:0001583"}


id: PBO:0080293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 57 pseudogene","termid":"PBO:0080293"}


id: PATO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency quality inhering in a bearer by virtue of the bearer's having efficiency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efficiency","termid":"PATO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"efficient","termid":"PATO:0001678"}


id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: PBO:0078522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 13","termid":"PBO:0078522"}


id: GO:0150073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["PMID:26670206","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150073"}


id: GO:0010924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of inositol-polyphosphate 5-phosphatase activity, the catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inositol-polyphosphate 5-phosphatase activity","termid":"GO:0010924"}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: PBO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 4","termid":"PBO:0051977"}


id: PBO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 5","termid":"PBO:0070299"}


id: PBO:0087444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit III of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits","termid":"PBO:0087444"}


id: GO:1905233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a codeine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24914722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to codeine","termid":"GO:1905233"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: PBO:0073821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 1","termid":"PBO:0073821"}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["RHEA:19869","Reactome:R-HSA-2534040"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: GO:0052630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + N-acetyl-alpha-D-galactosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:2.7.7.83","RHEA:34363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine diphosphorylase activity","synonyms":[{"name":"N-acetylgalactosamine 1-phosphate uridylyltransferase","type":"exact"},{"name":"N-acetylgalactosamine-1-phosphate uridyltransferase activity","type":"exact"},{"name":"UDP-GalNAc pyrophosphorylase activity","type":"exact"},{"name":"UDP-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UDP-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"UTP:2-acetamido-2-deoxy-alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"UTP:N-acetyl-alpha-D-galactosamine-1-phosphate uridylyltransferase activity","type":"exact"},{"name":"uridine diphosphate-N-acetylgalactosamine pyrophosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine phosphorylase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine pyrophosphorylase activity","type":"exact"}],"termid":"GO:0052630"}


id: PBO:0063497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 5","termid":"PBO:0063497"}


id: FYPO:0006909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle occurs at a smaller cell size than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PMID:872890","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"mitotic G1/S phase transition at small cell size","synonyms":[{"name":"G1/S phase transition at small cell size during mitotic cell cycle","type":"exact"},{"name":"mitotic G1/S phase transition at abnormally small cell size","type":"exact"},{"name":"mitotic G1/S phase transition at small cell size during vegetative growth","type":"exact"},{"name":"small cell size at G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006909"}


id: PBO:0001442
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotonic dystrophy type 2","termid":"PBO:0001442"}


id: PBO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2","termid":"PBO:0039613"}


id: PR:O14200
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PXA domain protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.07c","synonyms":[{"name":"Spom972h-pxa1","type":"exact"}],"termid":"PR:O14200"}


id: PBO:0067661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 838, pseudogene","termid":"PBO:0067661"}


id: PBO:0035711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035711"}


id: GO:2000907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"negatively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucomannan catabolic process","synonyms":[{"name":"negative regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000907"}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: PBO:0059391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S25","termid":"PBO:0059391"}


id: GO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid passes intact through the host nuclear pore complex (NPC).","definition_xrefs":["VZ:989","PMID:22929056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of intact viral capsid into host nucleus through nuclear pore complex","termid":"GO:0075505"}


id: FYPO:0007018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 2'-O-methylguanosine is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal tRNA methylation","termid":"FYPO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal tRNA guanosine 2'-O-methylation","synonyms":[{"name":"normal 2'-O-methylguanosine level in tRNA","type":"related"},{"name":"normal tRNA 2'-O-methylguanosine formation","type":"exact"},{"name":"normal tRNA Gm formation","type":"exact"},{"name":"normal tRNA guanosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"normal tRNA guanosine 2'-O-methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007018"}


id: PBO:0056857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA2 antisense RNA 1","termid":"PBO:0056857"}


id: GO:0015209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cytosine, 4-amino-2-hydroxypyrimidine from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transporter activity","termid":"GO:0005350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cytosine transmembrane transporter activity","termid":"GO:0015209"}


id: PBO:0068238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S pre-ribosomal N4","termid":"PBO:0068238"}


id: GO:1900109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 dimethylation (obsolete GO:1900109)","synonyms":[{"name":"regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900109"}


id: GO:0098686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the giant synapses that form between the mossy fiber axons of dentate gyrus granule cells and the large complex spines of CA3 pyramidal cells. It consists of a giant bouton known as the mossy fiber expansion, synapsed to the complex, multiheaded spine (thorny excresence) of a CA3 pyramidal cell.","definition_xrefs":["PMID:13869693","DOI:10.1002/1096-9861","PMID:23264762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber to CA3 synapse","termid":"GO:0098686"}


id: PBO:0000317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Tup12","termid":"PBO:0000317"}


id: PBO:0071510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 13","termid":"PBO:0071510"}


id: FYPO:0003347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a catalytic activity differs from wild type.","definition_xrefs":["PMID:23091597","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"altered substrate specificity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity","type":"exact"}],"termid":"FYPO:0003347"}


id: FYPO:0002650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the kinetochore is divided into two or more parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal kinetochore morphology during vegetative growth","termid":"FYPO:0000050"},{"relation_name":"is_a","term_name":"split kinetochore","termid":"FYPO:0005647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"split kinetochore during vegetative growth","synonyms":[{"name":"split kinetochore during mitotic cell cycle","type":"related"},{"name":"split kinetochores during vegetative growth","type":"exact"}],"termid":"FYPO:0002650"}


id: PBO:0083698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the oligosaccharyltransferase complex; located in the ER lumen; catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0083698"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: PBO:0025470
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sapk INteracting protein","termid":"PBO:0025470"}


id: PBO:0074381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 7","termid":"PBO:0074381"}


id: GO:2000653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic imprinting.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of genetic imprinting (obsolete GO:2000653)","synonyms":[{"name":"regulation of DNA imprinting","type":"exact"}],"termid":"GO:2000653"}


id: RO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_sequence","termid":"RO:0002518"}


id: GO:0033505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the floor plate is generated and organized.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"floor plate development","termid":"GO:0033504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate morphogenesis","termid":"GO:0033505"}


id: GO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoate + NAD+ = H+ + NADH + succinate semialdehyde.","definition_xrefs":["EC:1.1.1.61","RHEA:23948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01644"],"synonyms":[{"name":"4-hydroxybutanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"gamma-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0047577"}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97735],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: PBO:0082386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 6 subunit of the 20S proteasome","termid":"PBO:0082386"}


id: GO:0052631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-(4R)-4-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (4R,8E)-4-hydroxysphingenine ceramide + 2 Fe(III)-[cytochrome b5] + 2 H2O or an N-acyl-(4R)-4-hydroxysphinganine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (4R,8Z)-4-hydroxysphing-8-enine ceramide + 2 Fe(III)-[cytochrome b5] + 2 H2O. This results in the formation of a double bond between C8 and C9 of the long chain base of a sphingolipid.","definition_xrefs":["EC:1.14.19.29","PMID:9786850","PMID:17600137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sphingolipid 8-(E/Z)-desaturase activity","synonyms":[{"name":"8 fatty acid desaturase","type":"exact"},{"name":"8-sphingolipid desaturase","type":"exact"},{"name":"sphingolipid delta-8 desaturase activity","type":"exact"}],"termid":"GO:0052631"}


id: PBO:0080602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 36","termid":"PBO:0080602"}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: PBO:0077181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 5","termid":"PBO:0077181"}


id: PBO:0044280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 3","termid":"PBO:0044280"}


id: GO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a digestive system process, a physical, chemical, or biochemical process carried out by the host organism to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host digestive system process (obsolete GO:0044056)","synonyms":[{"name":"regulation by symbiont of host digestive system process","type":"exact"}],"termid":"GO:0044056"}


id: GO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA.","definition_xrefs":["EC:5.1.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase activity","secondary_identifiers":["Reactome:R-HSA-192056","RHEA:12657","Reactome:R-HSA-193452","Reactome:R-HSA-193736","Reactome:R-HSA-193763","MetaCyc:5.1.99.4-RXN","Reactome:R-HSA-389897"],"synonyms":[{"name":"2-methylacyl-CoA 2-epimerase activity","type":"related"}],"termid":"GO:0008111"}


id: GO:0030880
data:
  {"annotated_genes":["SJAG_03578","SJAG_04274","SJAG_00116","SJAG_04977","SJAG_01444","SJAG_03356","SJAG_04408","SJAG_04894","SJAG_00119","SJAG_02627","SJAG_01765","SJAG_01475","SJAG_00512","SJAG_01610","SJAG_01128","SJAG_00458","SJAG_00584","SJAG_03956","SJAG_04261","SJAG_01808","SJAG_04917","SJAG_02070","SJAG_02458","SJAG_01698","SJAG_01313","SJAG_02174","SJAG_03468","SJAG_03144","SJAG_00139","SJAG_00159","SJAG_00619","SJAG_04852","SJAG_01710","SJAG_03289","SJAG_04161","SJAG_00421","SJAG_03900","SJAG_03761","SJAG_03285","SJAG_04614","SJAG_03181","SJAG_03921","SJAG_01562","SJAG_02101","SJAG_01436","SJAG_01207","SJAG_00095","SJAG_04994","SJAG_02871","SJAG_01948","SJAG_01713","SJAG_03206","SJAG_02172","SJAG_02725","SJAG_02506","SJAG_02541","SJAG_03035","SJAG_04368","SJAG_01151","SJAG_04654","SJAG_03618","SJAG_03118","SJAG_02600","SJAG_04559","SJAG_04934","SJAG_00637","SJAG_03107","SJAG_00758","SJAG_04933","SJAG_00150","SJAG_00901","SJAG_04420","SJAG_04030","SJAG_02653","SJAG_04106","SJAG_03014","SJAG_03193","SJAG_00735","SJAG_00872","SJAG_00995","SJAG_00741","SJAG_05239","SJAG_00731"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113376,95495,93522,101386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[107542,101425,91313,95233,99138],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[91236,83564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[111477,95640,114009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"},{"annotations":[91848,109209,100941,105850,83830,101848,88130,110281,109582,83831,98615,99421,85683,109869,90005,98759,106753,109583,86506,111579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[101849,105342,97083,110730,90196,109870,92912,103764,108913,97855,90006,99422,88131],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005665"},{"annotations":[90007,90197,105343,109871,92913,88132,97084,103765,99423,110731,97856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016591"},{"annotations":[89114,99424,112825,85684,88133,111727,108447,104508,97583,101850,94251,98760,97622,109872,107538,90008,112518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[111479,114011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031379"},{"annotations":[113386,103749],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[84753,96301,111443,92900,99701,90248,91684,85414,110862,84495,92136,102965,83537,89610,110296,113601],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[111134,93711],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[89611,98377,111042],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[111200,99235,105051,110895,102102,88273,86018,104551,86385],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[109036,102103,108149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01128":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01444":null,"SJAG_01475":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01808":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02172":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_02725":null,"SJAG_02871":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03193":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03356":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03618":null,"SJAG_03761":null,"SJAG_03900":null,"SJAG_03921":null,"SJAG_03956":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04408":null,"SJAG_04420":null,"SJAG_04559":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04934":null,"SJAG_04977":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"multisubunit RNA polymerase","type":"exact"}],"termid":"GO:0030880","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016591":null,"GO:0016593":null,"GO:0031379":null,"GO:0031380":null,"GO:0034245":null,"GO:0070985":null}}


id: GO:2000342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 2 production","termid":"GO:2000341"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904208"],"synonyms":[{"name":"inhibition of CCL2 secretion","type":"narrow"},{"name":"inhibition of chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"negative regulation of CXCL2 production","type":"exact"},{"name":"negative regulation of MIP-2 production","type":"exact"},{"name":"negative regulation of MIP2 production","type":"exact"},{"name":"negative regulation of SCYB2 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000342"}


id: PBO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med27","termid":"PBO:0018255"}


id: GO:0120119
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["PMID:10361731","PMID:25972344","PMID:16414276","PMID:20541452","PMID:2606941","PMID:26746239","PMID:26776656","PMID:17945531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"flagellum attachment zone","synonyms":[{"name":"FAZ","type":"related"}],"termid":"GO:0120119"}


id: PR:O74330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S27-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02489","PANTHER:PTHR11594:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.10","secondary_identifiers":["UniProtKB:O74330"],"synonyms":[{"name":"Spom972h-RPS27L","type":"exact"}],"termid":"PR:O74330"}


id: GO:0090230
data:
  {"annotated_genes":["SJAG_01837","SJAG_04638","SJAG_00718","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[98460,112739,85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"centromere complex assembly","termid":"GO:0034508"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere licensing","type":"related"}],"termid":"GO:0090230","terms_by_termid":{"GO:1905560":null,"GO:1905561":null}}


id: PBO:0028303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleolus","termid":"PBO:0028303"}


id: GO:0007008
data:
  {"annotated_genes":["SJAG_05268","SJAG_02361","SJAG_02355","SJAG_03502","SJAG_02034","SJAG_01951","SJAG_03416","SJAG_02797","SJAG_00569","SJAG_01780"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96603],"is_not":false,"summary":null,"term":"GO:0007008"},{"annotations":[87023,106477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070096"},{"annotations":[106468,94677,94332,106478,87025,106118,86499,107861,103640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial outer membrane.","definition_xrefs":["GOC:dph","GOC:ai","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_01780":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02797":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005"],"is_obsolete":false,"name":"outer mitochondrial membrane organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"outer mitochondrial membrane organisation","type":"exact"},{"name":"outer mitochondrial membrane organization and biogenesis","type":"related"}],"termid":"GO:0007008","terms_by_termid":{"GO:0007008":null,"GO:0045040":null,"GO:0070096":null}}


id: GO:0050772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"positively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axonogenesis","synonyms":[{"name":"activation of axonogenesis","type":"narrow"},{"name":"stimulation of axonogenesis","type":"narrow"},{"name":"up regulation of axonogenesis","type":"exact"},{"name":"up-regulation of axonogenesis","type":"exact"},{"name":"upregulation of axonogenesis","type":"exact"}],"termid":"GO:0050772"}


id: PR:P00046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c, somatic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04793","PANTHER:PTHR11961:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.07","secondary_identifiers":["UniProtKB:P00046"],"synonyms":[{"name":"Spom972h-CYCS","type":"exact"}],"termid":"PR:P00046"}


id: PBO:0039361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 3","termid":"PBO:0039361"}


id: FYPO:0004142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene. An RNA polymerase II proximal promoter is a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II.","definition_xrefs":["GO:0000978","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased RNA polymerase II proximal promoter sequence-specific DNA binding","synonyms":[{"name":"decreased transcription factor binding to promoter region","type":"related"},{"name":"reduced RNA polymerase II proximal promoter sequence-specific DNA binding","type":"exact"}],"termid":"FYPO:0004142"}


id: PBO:0089313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein Nod1","termid":"PBO:0089313"}


id: PBO:0060710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 7","termid":"PBO:0060710"}


id: PBO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 29","termid":"PBO:0045278"}


id: PBO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S3 (predicted)","termid":"PBO:0004871"}


id: GO:1990466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sumoylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["PMID:21518767","PMID:23443663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein autosumoylation","synonyms":[{"name":"protein auto-sumoylation","type":"exact"},{"name":"protein self-sumoylation","type":"exact"}],"termid":"GO:1990466"}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: PBO:0056204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A12","termid":"PBO:0056204"}


id: GO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process","synonyms":[{"name":"apoptosis regulator activity","type":"related"},{"name":"regulation of apoptosis","type":"narrow"}],"termid":"GO:0042981"}


id: GO:0099578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating translation occurring at the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"},{"relation_name":"is_a","term_name":"regulation of translation at synapse, modulating synaptic transmission","termid":"GO:0099547"},{"relation_name":"is_a","term_name":"regulation of translation at postsynapse","termid":"GO:0140245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of translation at postsynapse, modulating synaptic transmission","termid":"GO:0099578"}


id: PBO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (predicted)","termid":"PBO:0005186"}


id: PBO:0086833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function with similarity to helicases; located in the telomere region on the right arm of chromosome VIII","termid":"PBO:0086833"}


id: GO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic interphase chromosome (obsolete GO:0000233)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"exact"}],"termid":"GO:0000233"}


id: PBO:0034689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K16_acetylation","termid":"PBO:0034689"}


id: PBO:0068432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 2","termid":"PBO:0068432"}


id: GO:0044668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sodium(out)+ malonate(out) = sodium(in) + malonate(in).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"},{"relation_name":"is_a","term_name":"malonate(1-) transmembrane transporter activity","termid":"GO:1901239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium:malonate symporter activity","secondary_identifiers":["RHEA:33135"],"termid":"GO:0044668"}


id: GO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which autophagosomes, double-membraned vesicles containing cytoplasmic material, fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.","definition_xrefs":["PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006914","GO:0006810","GO:0008150","GO:0044248","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"autophagosome-lysosome fusion","synonyms":[{"name":"autophagosome fusion","type":"broad"},{"name":"autophagosome-vacuole fusion","type":"exact"}],"termid":"GO:0061909"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PBO:0078241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 21/OR9-2 (pseudogene)","termid":"PBO:0078241"}


id: GO:0020010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spiral cytoskeletal structure located at the apical end of the apical complex in some apicomplexan parasites. Fibers form a left-handed spiral, and are comprised of tubulin protofilaments organized in a ribbon-like structure that differs from the conventional tubular structure characteristic of microtubules.","definition_xrefs":["GOC:expert_dr","PMID:11901169","PMID:16518471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"conoid","termid":"GO:0020010"}


id: PBO:0039246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L1","termid":"PBO:0039246"}


id: PBO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 9 pseudogene","termid":"PBO:0050930"}


id: PBO:0074293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolemma associated protein","termid":"PBO:0074293"}


id: GO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme-directed rRNA 2'-O-methylation (obsolete GO:0000453)","termid":"GO:0000453"}


id: PBO:0052328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1614","termid":"PBO:0052328"}


id: FYECO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 4-nitroquinoline N-oxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 4-NQO","synonyms":[{"name":"+ 4-nitroquinoline N-oxide","type":"exact"},{"name":"+ 4NQO","type":"exact"}],"termid":"FYECO:0000326"}


id: PBO:0082501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase delta; responsible for most of lagging strand DNA synthesis; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)","termid":"PBO:0082501"}


id: GO:0070008
data:
  {"annotated_genes":["SJAG_04819","SJAG_01868","SJAG_00975","SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87922,84362,100467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[97373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01868":null,"SJAG_04819":null,"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008233","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"serine-type exopeptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070008","terms_by_termid":{"GO:0004185":null,"GO:0008240":null}}


id: PBO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 17","termid":"PBO:0071411"}


id: GO:0033040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble sour compounds to initiate a change in cell activity. These receptors are responsible for the sense of sour taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sour taste receptor activity","termid":"GO:0033040"}


id: PBO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_CCCP","termid":"PBO:0030704"}


id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: PBO:0072986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scinderin","termid":"PBO:0072986"}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: GO:2000309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:2000307"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"positive regulation of RANKL production","type":"exact"},{"name":"positive regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000309"}


id: PBO:0110190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein involved in heme biosynthesis, TMEM14 superfamily Aim19","termid":"PBO:0110190"}


id: PBO:0081390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 230","termid":"PBO:0081390"}


id: PBO:0082237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-isopropylmalate synthase (2-isopropylmalate synthase); the main isozyme responsible for the first step in the leucine biosynthesis pathway; LEU4 has a paralog, LEU9, that arose from the whole genome duplication","termid":"PBO:0082237"}


id: GO:0009297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a pilus, a short filamentous structure of bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.","definition_xrefs":["GOC:tb","GOC:mcc2","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"pilus organization","termid":"GO:0043711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pilus assembly","synonyms":[{"name":"fimbria assembly","type":"narrow"},{"name":"fimbria biogenesis","type":"related"},{"name":"fimbriae assembly","type":"narrow"},{"name":"fimbriae biogenesis","type":"related"},{"name":"fimbrial assembly","type":"narrow"},{"name":"fimbrium assembly","type":"narrow"},{"name":"fimbrium biogenesis","type":"related"},{"name":"pilus biogenesis","type":"related"},{"name":"pilus formation","type":"exact"}],"termid":"GO:0009297"}


id: PR:P79016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.02","synonyms":[{"name":"S16-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1902","type":"exact"}],"termid":"PR:P79016"}


id: FYPO:0001185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased alpha-glucosidase activity","synonyms":[{"name":"reduced alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001185"}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["EC:1.14.13.243","MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN","UM-BBD_enzymeID:e0222"],"termid":"GO:0018644"}


id: GO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fragment of RNA, such as excised introns or sequences removed from ribosomal RNA during processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA fragment catabolic process","secondary_identifiers":["GO:0030452"],"synonyms":[{"name":"RNA fragment breakdown","type":"exact"},{"name":"RNA fragment catabolism","type":"exact"},{"name":"RNA fragment degradation","type":"exact"},{"name":"group I intron catabolic process","type":"narrow"}],"termid":"GO:0000292"}


id: GO:0018139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl phenylalanine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0243"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-phenylalanine thiazolecarboxylic acid (obsolete GO:0018139)","termid":"GO:0018139"}


id: PBO:0111329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome bigenesis rRNA methyltransferase Spb1","termid":"PBO:0111329"}


id: GO:0102703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (-)-camphene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.117","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"camphene synthase activity","secondary_identifiers":["RHEA:25484","MetaCyc:RXN-5142"],"termid":"GO:0102703"}


id: PBO:0111496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex associated RNA-binding protein Rns1","termid":"PBO:0111496"}


id: SO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence used in experiment.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biomaterial_region","termid":"SO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent","termid":"SO:0000695"}


id: PBO:0064800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit beta","termid":"PBO:0064800"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_02452","SJAG_03065","SJAG_05320","SJAG_01520","SJAG_04281","SJAG_02777","SJAG_01767","SJAG_00782","SJAG_04918","SJAG_00860","SJAG_04378","SJAG_03584","SJAG_00889","SJAG_01468","SJAG_01734","SJAG_04788","SJAG_03053","SJAG_04173","SJAG_04164","SJAG_00628","SJAG_02067","SJAG_00105","SJAG_00148","SJAG_02359","SJAG_04494","SJAG_02324","SJAG_02643","SJAG_02201","SJAG_00944","SJAG_00060","SJAG_04753","SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86007,86061,88182,89754,90293,90579,90592,91449,92030,92731,94085,94086,94315,98395,99163,99444,100017,100084,102092,102453,104011,104154,104410,104656,105431,106205,106450,106738,108428,111646,112078,114104],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: PBO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_branching_relationship_with","termid":"PBO:0034099"}


id: PBO:0064328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS1 pseudogene 1","termid":"PBO:0064328"}


id: MOD:02068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamic acid residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}


id: PBO:0076588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 10A","termid":"PBO:0076588"}


id: PBO:0054631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2036","termid":"PBO:0054631"}


id: GO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iridophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iridophore differentiation","termid":"GO:0050937"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"iridophore differentiation","termid":"GO:0050935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of iridophore differentiation","synonyms":[{"name":"activation of iridophore differentiation","type":"narrow"},{"name":"stimulation of iridophore differentiation","type":"narrow"},{"name":"up regulation of iridophore differentiation","type":"exact"},{"name":"up-regulation of iridophore differentiation","type":"exact"},{"name":"upregulation of iridophore differentiation","type":"exact"}],"termid":"GO:0050945"}


id: PBO:0056320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 5","termid":"PBO:0056320"}


id: GO:1905486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["PMID:16516839","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior/posterior axon guidance","synonyms":[{"name":"regulation of anterior-posterior axon guidance","type":"exact"},{"name":"regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905486"}


id: GO:0007632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to a visual stimulus.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual behavior","synonyms":[{"name":"behavioral response to visual stimulus","type":"exact"},{"name":"behavioural response to visual stimulus","type":"exact"},{"name":"visual behaviour","type":"exact"}],"termid":"GO:0007632"}


id: PBO:0049240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 8","termid":"PBO:0049240"}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: PBO:0085163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp2p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; NPP1 has a paralog, NPP2, that arose from the whole genome duplication, and an npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085163"}


id: PBO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Tup11","termid":"PBO:0000265"}


id: PBO:0058388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4760","termid":"PBO:0058388"}


id: GO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"negatively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uterine smooth muscle contraction","synonyms":[{"name":"down regulation of uterine smooth muscle contraction","type":"exact"},{"name":"down-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"downregulation of uterine smooth muscle contraction","type":"exact"},{"name":"inhibition of uterine smooth muscle contraction","type":"narrow"},{"name":"negative regulation of myometrial contraction","type":"exact"},{"name":"negative regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"negative regulation of myometrium contraction","type":"exact"},{"name":"uterine smooth muscle relaxation","type":"related"}],"termid":"GO:0070473"}


id: GO:0008614
data:
  {"annotated_genes":["SJAG_00283","SJAG_01881","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88921],"is_not":false,"summary":null,"term":"GO:0008614"},{"annotations":[91602,83879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00691":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyridoxine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006773"],"synonyms":[{"name":"pyridoxine metabolism","type":"exact"}],"termid":"GO:0008614","terms_by_termid":{"GO:0008614":null,"GO:0008615":null}}


id: PBO:0079901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase binding protein","termid":"PBO:0079901"}


id: GO:0009666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the outer membrane of a plastid.","definition_xrefs":["GOC:jl","GOC:ai","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plastid outer membrane organization","synonyms":[{"name":"plastid outer membrane organisation","type":"exact"},{"name":"plastid outer membrane organization and biogenesis","type":"related"}],"termid":"GO:0009666"}


id: PBO:0073293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 15","termid":"PBO:0073293"}


id: SO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_methylation_site","synonyms":[{"name":"H3K79 methylation site","type":"exact"}],"termid":"SO:0001735"}


id: PBO:0087931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transketolase; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids; TKL1 has a paralog, TKL2, that arose from the whole genome duplication","termid":"PBO:0087931"}


id: PBO:0087981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair","termid":"PBO:0087981"}


id: GO:0102752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a glucosylated glycogenin = a glycogen.","definition_xrefs":["EC:2.4.1.18","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)","secondary_identifiers":["MetaCyc:RXN-7669"],"termid":"GO:0102752"}


id: GO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a XCR1 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"XCR1 chemokine receptor binding","synonyms":[{"name":"XCR1 chemokine receptor ligand","type":"narrow"},{"name":"lymphotactin receptor binding","type":"exact"}],"termid":"GO:0031738"}


id: FYPO:0002313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular ergosterol level","termid":"FYPO:0002321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"ergosterol absent from cell","synonyms":[{"name":"ergosterol absent from cell during mitotic cell cycle","type":"related"},{"name":"ergosterol absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002313"}


id: GO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. DNA repair pathways that do not increase the mutation rate above spontaneous background levels, e.g. excision and recombination pathways.","definition_xrefs":["GOC:jl","PMID:11459974"],"gene_count":0,"genotype_count":0,"name":"obsolete error-free DNA repair (obsolete GO:0045021)","synonyms":[{"name":"error-free DNA repair","type":"exact"}],"termid":"GO:0045021"}


id: PBO:0045744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 1","termid":"PBO:0045744"}


id: PBO:0050648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 4, pseudogene","termid":"PBO:0050648"}


id: PBO:0040977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 5","termid":"PBO:0040977"}


id: PBO:0083237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion reduces expression of PIS1 gene encoding phosphatidylinositol synthase","termid":"PBO:0083237"}


id: PBO:0005351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (predicted)","termid":"PBO:0005351"}


id: GO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric proximal tubule over time, from its formation to the mature structure. The mesonephric proximal tubule extends from the capsule to the distal tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric proximal tubule development","termid":"GO:0061275"}


id: GO:0007530
data:
  {"annotated_genes":["SJAG_06638","SJAG_01465","SJAG_01076","SJAG_00073","SJAG_05239","SJAG_05153","SJAG_02556","SJAG_02828","SJAG_02724","SJAG_01113","SJAG_00247","SJAG_03221","SJAG_01419","SJAG_02079","SJAG_01495","SJAG_02460","SJAG_01601","SJAG_03097","SJAG_01677","SJAG_01410","SJAG_02226","SJAG_03997","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[85425,102699,114786,112861,106891,95210,111084,84085,93528,92276,104582,106370,96657,102129,85301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[115104,115103,103117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[95212,106892,114787,106371,92754,95148,92277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[104583,99311,90184],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89451],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of sexual status of an individual organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Sex-determination_system"],"termid":"GO:0007530","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: PBO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 5","termid":"PBO:0042479"}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: GO:0070085
data:
  {"annotated_genes":["SJAG_04231","SJAG_02903","SJAG_03871","SJAG_04316","SJAG_04906","SJAG_04053","SJAG_03764","SJAG_04090","SJAG_02648","SJAG_00831","SJAG_01950","SJAG_04728","SJAG_03149","SJAG_04821","SJAG_03150","SJAG_03056","SJAG_00598","SJAG_02783","SJAG_03555","SJAG_05348","SJAG_02996","SJAG_02519","SJAG_03790","SJAG_02163","SJAG_03188","SJAG_01006","SJAG_00816","SJAG_00183","SJAG_03656","SJAG_00747","SJAG_01595","SJAG_03333","SJAG_01972","SJAG_03676","SJAG_04770","SJAG_04954","SJAG_04571","SJAG_01491","SJAG_04952","SJAG_00924","SJAG_02056","SJAG_00394","SJAG_01021","SJAG_03082","SJAG_04401","SJAG_05219","SJAG_00554","SJAG_04363","SJAG_01264","SJAG_01389","SJAG_03774","SJAG_01276","SJAG_04127","SJAG_03311","SJAG_02102","SJAG_01069","SJAG_03535","SJAG_00437","SJAG_04095","SJAG_00334","SJAG_03280","SJAG_03330","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102021,89127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044845"},{"annotations":[99656,98381,112802,94773,96087,90001,83655,92523,94441,108622,94494,107152,101063,87237,105361,96070,86502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[113861,104457,91817,104085,109837,110032,112151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[100583,102786,85341,96843,98869,102022,83657,95865,93880,94865,101126,96107,89248,94867,105363,93987,89250,95729,94845,113359,114076,106785,94847,95010,98648,108765,83530,98796,94846,96411,94854,94866,96071,99657,99858,89249,105091,94844,114402,114546,89247,101011,106779,94868,97421,106976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[112906,98649,91428,105364,107153,97430,109838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[94855,101825,98797,106780,114077,106786,96844,102023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[92525,99859,97618,100584,114403,102787,100166,89128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment and further modification of carbohydrate residues to a substrate molecule.","definition_xrefs":["GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycosylation"],"termid":"GO:0070085","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null,"GO:0044845":null}}


id: GO:1905187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metaphase/anaphase transition of meiosis I.","definition_xrefs":["GOC:TermGenie","PMID:21389117","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902103"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis I","termid":"GO:1905186"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of meiosis I","termid":"GO:1990949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of metaphase/anaphase transition of meiosis I","termid":"GO:1905187"}


id: GO:0035128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an organism.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic limb morphogenesis","termid":"GO:0035127"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic forelimb morphogenesis","termid":"GO:0035128"}


id: PBO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-peroxisomes_absent","termid":"PBO:0031833"}


id: PBO:0046579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 21, envelope","termid":"PBO:0046579"}


id: GO:1900684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"negatively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of fumonisin biosynthetic process","synonyms":[{"name":"down regulation of fumonisin anabolism","type":"exact"},{"name":"down regulation of fumonisin biosynthesis","type":"exact"},{"name":"down regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down regulation of fumonisin formation","type":"exact"},{"name":"down regulation of fumonisin synthesis","type":"exact"},{"name":"down-regulation of fumonisin anabolism","type":"exact"},{"name":"down-regulation of fumonisin biosynthesis","type":"exact"},{"name":"down-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down-regulation of fumonisin formation","type":"exact"},{"name":"down-regulation of fumonisin synthesis","type":"exact"},{"name":"downregulation of fumonisin anabolism","type":"exact"},{"name":"downregulation of fumonisin biosynthesis","type":"exact"},{"name":"downregulation of fumonisin biosynthetic process","type":"exact"},{"name":"downregulation of fumonisin formation","type":"exact"},{"name":"downregulation of fumonisin synthesis","type":"exact"},{"name":"inhibition of fumonisin anabolism","type":"exact"},{"name":"inhibition of fumonisin biosynthesis","type":"exact"},{"name":"inhibition of fumonisin biosynthetic process","type":"narrow"},{"name":"inhibition of fumonisin formation","type":"exact"},{"name":"inhibition of fumonisin synthesis","type":"exact"},{"name":"negative regulation of fumonisin anabolism","type":"exact"},{"name":"negative regulation of fumonisin biosynthesis","type":"exact"},{"name":"negative regulation of fumonisin formation","type":"exact"},{"name":"negative regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900684"}


id: GO:2001152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal water transport","termid":"GO:2001151"},{"relation_name":"negatively_regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal water transport","termid":"GO:2001152"}


id: PBO:0091602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid10","termid":"PBO:0091602"}


id: PBO:0062738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 5","termid":"PBO:0062738"}


id: PBO:0080453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visinin like 1","termid":"PBO:0080453"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: GO:0036479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of peroxidase.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"peroxidase inhibitor activity","termid":"GO:0036479"}


id: PATO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongy","termid":"PATO:0001480"}


id: PBO:0089436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1","termid":"PBO:0089436"}


id: GO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root epithelial mucilage metabolic process","termid":"GO:0048361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage biosynthetic process","synonyms":[{"name":"root epithelial mucilage anabolism","type":"exact"},{"name":"root epithelial mucilage biosynthesis","type":"exact"},{"name":"root epithelial mucilage formation","type":"exact"},{"name":"root epithelial mucilage synthesis","type":"exact"}],"termid":"GO:0048356"}


id: PBO:0034082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_serial_homology_relationship_with","termid":"PBO:0034082"}


id: PBO:0046309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease G","termid":"PBO:0046309"}


id: MOD:00231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues and a six-iron six-sulfur cluster to hexakis-L-cysteinyl hexairon hexasulfide.","definition_xrefs":["PubMed:1311311","RESID:AA0226","PubMed:1318833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexakis-L-cysteinyl hexairon hexasulfide","synonyms":[{"name":"hexa-mu3-sulfido-hexakis(S-cysteinyliron)","type":"exact"},{"name":"hexa-mu3-sulfido-hexakis(cysteinato-kappaS)-hexairon","type":"exact"},{"name":"hexakis-L-cysteinyl hexairon hexasulfide","type":"exact"},{"name":"prismane iron-sulfur cofactor","type":"exact"}],"termid":"MOD:00231"}


id: GO:0098628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphate residues from peptidyl-N-phospho-arginine to form peptidyl-arginine.","definition_xrefs":["PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N-phospho-arginine dephosphorylation","termid":"GO:0098628"}


id: GO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 2'-O-methyluracil.","definition_xrefs":["PMID:25626150","RHEA:43100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"},{"relation_name":"is_a","term_name":"tRNA 2'-O-methyltransferase activity","termid":"GO:0106050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016741","GO:0016740","GO:0140101"],"is_obsolete":false,"name":"tRNA (uracil-2'-O-)-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-6788707","MetaCyc:RXN0-5143"],"synonyms":[{"name":"tRNA (uracil 2')-methyltransferase activity","type":"related"},{"name":"tRNA uracil 2'-methyltransferase activity","type":"related"},{"name":"tRNA uracil-2'-O-methyltransferase activity","type":"related"}],"termid":"GO:0052665"}


id: PBO:0038402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_subfunction","termid":"PBO:0038402"}


id: GO:0097495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric protein complex made up of an H-NS homodimer and an Hha monomer. In Enterobacteriaceae, this complex negatively regulates transcription of a range of genes.","definition_xrefs":["GOC:bhm","PMID:21600204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"H-NS-Hha complex","termid":"GO:0097495"}


id: GO:0032425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mismatch repair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mismatch repair","termid":"GO:0032423"},{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"positively_regulates","term_name":"mismatch repair","termid":"GO:0006298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mismatch repair","synonyms":[{"name":"activation of mismatch repair","type":"narrow"},{"name":"stimulation of mismatch repair","type":"narrow"},{"name":"up regulation of mismatch repair","type":"exact"},{"name":"up-regulation of mismatch repair","type":"exact"},{"name":"upregulation of mismatch repair","type":"exact"}],"termid":"GO:0032425"}


id: PBO:0064872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 5","termid":"PBO:0064872"}


id: GO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.","definition_xrefs":["PMID:2455297","RHEA:10628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0016779","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA nucleotidyltransferase activity","secondary_identifiers":["EC:2.7.7.56","MetaCyc:TRNA-NUCLEOTIDYLTRANSFERASE-RXN"],"synonyms":[{"name":"RNase PH activity","type":"related"},{"name":"phosphate-dependent exonuclease activity","type":"related"},{"name":"ribonuclease PH activity","type":"related"}],"termid":"GO:0009022"}


id: PBO:0087105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1A has a paralog, RPS1B, that arose from the whole genome duplication","termid":"PBO:0087105"}


id: PBO:0027316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle","termid":"PBO:0027316"}


id: PATO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the consistency of water.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"watery","termid":"PATO:0002408"}


id: PBO:0080953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 6","termid":"PBO:0080953"}


id: PR:000050516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ssp2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC74.03c","termid":"PR:000050516"}


id: GO:0097484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single dendrite involved in cellular development.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite extension","termid":"GO:0097484"}


id: PBO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 4","termid":"PBO:0039523"}


id: GO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of sulfate to hydrogen sulfide, which acts as a terminal electron acceptor. Sulfate is activated to adenosine-phosphosulfate (APS) which is then reduced to sulfite, which is in turn reduced to hydrogen sulfide.","definition_xrefs":["PMID:25400653","PMID:26680199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"},{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dissimilatory sulfate reduction","secondary_identifiers":["MetaCyc:DISSULFRED-PWY","Wikipedia:Sulfate-reducing_microorganism"],"synonyms":[{"name":"dissimilatory sulphate reduction","type":"exact"}],"termid":"GO:0019420"}


id: FYPO:0001979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which excised introns in lariat form (i.e. not linearized) are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased lariat intron level","synonyms":[{"name":"accumulation of lariat introns","type":"related"},{"name":"increased lariat intron level during mitotic cell cycle","type":"related"},{"name":"increased lariat intron level during vegetative growth","type":"exact"},{"name":"increased level of lariat introns","type":"exact"},{"name":"lariat intron accumulation","type":"related"}],"termid":"FYPO:0001979"}


id: GO:0007312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the oocyte nucleus within the cell as part of the establishment and maintenance of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_sensu","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","termid":"GO:0051663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oocyte nucleus migration involved in oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0048128","GO:0048126","GO:0030722","GO:0008102"],"synonyms":[{"name":"establishment of localization of oocyte nucleus during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localisation involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal-ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis determination","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsoventral axis specification","type":"related"},{"name":"nucleus positioning in oocyte during oocyte axis determination","type":"broad"},{"name":"oocyte axis determination, establishment of localization of nucleus","type":"broad"},{"name":"oocyte axis determination, establishment of oocyte nucleus localization","type":"broad"},{"name":"oocyte axis determination, establishment of position of nucleus","type":"broad"},{"name":"oocyte axis determination, oocyte nuclear migration","type":"exact"},{"name":"oocyte axis determination, oocyte nucleus migration","type":"exact"},{"name":"oocyte axis determination, positioning of nucleus","type":"broad"},{"name":"oocyte nuclear migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis specification","type":"related"},{"name":"oocyte nucleus positioning during oocyte axis determination","type":"broad"}],"termid":"GO:0007312"}


id: GO:0036332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with placental growth factor (PlGF) receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:uh","PMID:12871269","PMID:7929268","Wikipedia:Placental_growth_factor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0004672","GO:0016740","GO:0140096","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"placental growth factor receptor activity","synonyms":[{"name":"PlGF receptor activity","type":"related"},{"name":"PlGF-activated receptor activity","type":"exact"},{"name":"placental growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0036332"}


id: GO:0140649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a hyphal filament from one host cell to another. This process involves the clearance of plant-derived plasmodesmal occlusion materials, cytoskeleton based constriction of invasive hypha to traverse plasmodesmata. Septins and F-actin are reorganized into an hourglass shape at the point of maximum hyphal constriction.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated cell-to-cell migration in host","termid":"GO:0106259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cell-to-cell migration by invasive hypha","synonyms":[{"name":"cell-to-cell migration by invasive hypha","type":"exact"},{"name":"host tissue colonization","type":"broad"},{"name":"invasive growth","type":"broad"},{"name":"invasive hyphae formation","type":"exact"},{"name":"plant tissue colonization","type":"broad"}],"termid":"GO:0140649"}


id: MOD:00016
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamine.","definition_xrefs":["DeltaMass:0","PubMed:6692818","PubMed:9342308","PubMed:3340166","RESID:AA0007","ChEBI:30011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine residue","synonyms":[{"name":"(2S)-2-amino-5-pentanediamic acid","type":"exact"},{"name":"2,5-bis(azanyl)-5-oxopentanoic acid","type":"exact"},{"name":"2,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-4-carbamoylbutanoic acid","type":"exact"},{"name":"2-aminoglutaramic acid","type":"exact"},{"name":"Gln","type":"exact"},{"name":"L-glutamine","type":"exact"},{"name":"alpha-amino-gamma-carbamylbutyric acid","type":"exact"},{"name":"glutamic acid 5-amide","type":"exact"},{"name":"glutamic acid gamma-amide","type":"exact"},{"name":"glutamide","type":"exact"}],"termid":"MOD:00016"}


id: GO:0033064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric DNA recombinase mediator complex that contains the Rad51 paralogs RAD51D and XRCC2, or orthologs thereof; conserved from fission yeast to human but absent from budding yeast.","definition_xrefs":["GOC:vw","PMID:16093548","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"XRCC2-RAD51D complex","synonyms":[{"name":"DX2 complex","type":"exact"}],"termid":"GO:0033064"}


id: GO:0102109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricaffeoyl spermidine + 3 S-adenosyl-L-methionine = 3 H+ + triferuloyl spermidine + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tricaffeoyl spermidine O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11261"],"termid":"GO:0102109"}


id: PBO:0038815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 2","termid":"PBO:0038815"}


id: GO:0008488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glutamate + reduced vitamin K + CO2 + O2 = peptidyl-gamma-carboxyglutamate + vitamin K epoxide.","definition_xrefs":["PMID:18374194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"gamma-glutamyl carboxylase activity","secondary_identifiers":["Reactome:R-HSA-159803","Reactome:R-HSA-6807214","Reactome:R-HSA-159795","Reactome:R-HSA-159752","Reactome:R-HSA-163810","EC:4.1.1.90","Reactome:R-HSA-159826","Reactome:R-HSA-159819","Reactome:R-HSA-159761","Reactome:R-HSA-163820","Reactome:R-HSA-9673231","RHEA:45140"],"termid":"GO:0008488"}


id: PBO:0026955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_growing_cell_tip","termid":"PBO:0026955"}


id: GO:0003700
data:
  {"annotated_genes":["SJAG_03538","SJAG_04749","SJAG_05153","SJAG_04388","SJAG_06576","SJAG_02810","SJAG_01930","SJAG_03346","SJAG_01062","SJAG_02326","SJAG_00386","SJAG_04191","SJAG_04036","SJAG_00304","SJAG_00979","SJAG_02938","SJAG_03183","SJAG_04813","SJAG_03388","SJAG_03473","SJAG_00792","SJAG_00124","SJAG_05288","SJAG_04009","SJAG_03735","SJAG_02138","SJAG_03484","SJAG_02752","SJAG_05337","SJAG_05234","SJAG_02218","SJAG_02922","SJAG_01243","SJAG_00037","SJAG_04584","SJAG_00073","SJAG_03918","SJAG_01916","SJAG_00987","SJAG_02311","SJAG_01583","SJAG_03241","SJAG_00210","SJAG_01532","SJAG_02252","SJAG_01441","SJAG_02730","SJAG_00698","SJAG_03143","SJAG_06599","SJAG_03519","SJAG_05247","SJAG_02569","SJAG_00693","SJAG_02898","SJAG_02406","SJAG_00163","SJAG_00926","SJAG_04855","SJAG_00266","SJAG_03911","SJAG_01725","SJAG_04092","SJAG_02149","SJAG_03879","SJAG_01307","SJAG_04374","SJAG_02956","SJAG_04421","SJAG_05343","SJAG_05006","SJAG_01343","SJAG_02052","SJAG_01740","SJAG_00664","SJAG_04839","SJAG_04249","SJAG_00802","SJAG_02472","SJAG_02709","SJAG_02048","SJAG_01694","SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71164,72010,77174,105122],"is_not":false,"summary":null,"term":"GO:0003700"},{"annotations":[105428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001216"},{"annotations":[95586,103121,105121,84115,102173,104046,88854,94523,94214,105258,112142,92386,84609,106799,89393,107991,89817,112536,100847,86225,107951,107992,114094,85179,98363,85596,93402,113531,110155,110645,91802,109757,90844,83746,96576,101901,103650,100521,88018,105767,84936,84186,104876,95886,105259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001228"},{"annotations":[93625,93628,93627,100522,106970,99642,106954,102174,98129,97567,93624,98313,100528,112674,107129,98778,84554,57124,93031,106800,106938,96205,88855,111692,65506,92679,93626,92149,114377,109478,110900,105429,88569,91803,104294,104706,93162,89334,93479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000981"},{"annotations":[90827,112143,89394,102316,104877,90170,79277,100523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[92492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00073":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01916":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02810":null,"SJAG_02898":null,"SJAG_02922":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04374":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05234":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001204","GO:0001071","GO:0001151","GO:0001131","GO:0000130","GO:0001199","GO:0001130"],"synonyms":[{"name":"DNA binding transcription factor activity","type":"exact"},{"name":"bacterial-type DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription enhancer sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding","type":"narrow"},{"name":"gene-specific transcription factor activity","type":"exact"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity","type":"narrow"},{"name":"nucleic acid binding transcription factor activity","type":"broad"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity","type":"narrow"},{"name":"sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"},{"name":"transcription factor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcription factor activity, bacterial-type RNA polymerase transcription enhancer sequence-specific binding","type":"narrow"},{"name":"transcription factor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0003700","terms_by_termid":{"GO:0000981":null,"GO:0001216":null,"GO:0001227":null,"GO:0001228":null,"GO:0003700":null,"GO:0106250":null}}


id: PBO:0048504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 5","termid":"PBO:0048504"}


id: GO:1990076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in abscission.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in abscission","termid":"GO:1990076"}


id: PBO:0005560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase Adh1","termid":"PBO:0005560"}


id: GO:0070583
data:
  {"annotated_genes":["SJAG_02248","SJAG_04010","SJAG_00663","SJAG_04470","SJAG_03688","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90607,95913,95914,96197,102074,112036],"is_not":false,"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a bending force is generated in the prospore membrane to form the characteristic curved shape of the prospore.","definition_xrefs":["PMID:18756268","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_02248":null,"SJAG_03688":null,"SJAG_04010":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150","GO:0044085","GO:0030437"],"is_obsolete":false,"name":"spore membrane bending pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM bending","type":"exact"},{"name":"ascospore-type prospore membrane bending","type":"exact"},{"name":"forespore membrane bending","type":"exact"}],"termid":"GO:0070583","terms_by_termid":{"GO:0070583":null}}


id: SO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in kinetoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"kinetoplast","termid":"SO:0000741"},{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast_gene","synonyms":[{"name":"kinetoplast gene","type":"exact"}],"termid":"SO:0000089"}


id: PBO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway","termid":"PBO:0039687"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: PATO:0000465
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000465 marked (obsolete PATO:0000465)","termid":"PATO:0000465"}


id: PBO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fhl1","termid":"PBO:0002155"}


id: GO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ornithine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"ornithine transmembrane import into vacuole","synonyms":[{"name":"vacuolar ornithine import","type":"related"}],"termid":"GO:0090455"}


id: PBO:0067122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 167, pseudogene","termid":"PBO:0067122"}


id: PBO:0040039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic residue methyltransferase 1","termid":"PBO:0040039"}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: GO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into an inhibitor of kappa B (I-kappaB) protein. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing bound NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.","definition_xrefs":["PMID:21772278","PMID:7594468","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"part_of","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"I-kappaB phosphorylation","synonyms":[{"name":"IKB phosphorylation","type":"exact"},{"name":"IkappaB phosphorylation","type":"exact"},{"name":"inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:0007252"}


id: PBO:0049617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 20","termid":"PBO:0049617"}


id: GO:0046792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Viral interference in host cell processes that lead cell cycle arrest, allowing cell division to occur.","definition_xrefs":["PMID:9371605"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cell cycle arrest (obsolete GO:0046792)","synonyms":[{"name":"negative regulation by virus of cell cycle arrest","type":"exact"},{"name":"viral inhibition of cell cycle arrest","type":"exact"}],"termid":"GO:0046792"}


id: PBO:0088942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) ATPase subunit Get3","termid":"PBO:0088942"}


id: PBO:0089906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase, KAT5 family Mst1","termid":"PBO:0089906"}


id: PBO:0029549
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nitrogen_starvation_gene_mRNA_during_vegetative_growth","termid":"PBO:0029549"}


id: PBO:0039725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3G","termid":"PBO:0039725"}


id: FYPO:0000398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition","synonyms":[{"name":"advanced mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"cell cycle progression through the G1/S phase transition: premature","type":"related"},{"name":"premature G1/S phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"premature mitotic G1/S phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G1/S transition","type":"exact"}],"termid":"FYPO:0000398"}


id: PBO:0042521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK2AP1 pseudogene 1","termid":"PBO:0042521"}


id: PBO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn6 (predicted)","termid":"PBO:0004476"}


id: PBO:0086307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with MTHFR activity in vitro; null mutant has no phenotype and is prototrophic for methionine; MET13 encodes major isozyme of methylenetetrahydrofolate reductase (MTHFR)","termid":"PBO:0086307"}


id: GO:0044706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A multicellular organism process which involves another multicellular organism of the same or different species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-multicellular organism process","termid":"GO:0044706"}


id: PBO:0064672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 7","termid":"PBO:0064672"}


id: PBO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 1","termid":"PBO:0002169"}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["EC:1.14.12.14","RHEA:23468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0218","GO:0018605","MetaCyc:2ASDOSALCAL-RXN","KEGG_REACTION:R05156"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: PBO:0046443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPN2 intronic transcript 1","termid":"PBO:0046443"}


id: SO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a vaultRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaultRNA_primary_transcript","synonyms":[{"name":"vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002040"}


id: PATO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of physical entities inhering in a bearer by virtue of the bearer's lacking a physical part as specified by the additional entity.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacks parts or has fewer parts of type","termid":"PATO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks all parts of type","secondary_identifiers":["PATO:0001557","OBO_REL:lacks_part"],"synonyms":[{"name":"lacks all physical parts of type","type":"exact"}],"termid":"PATO:0002000"}


id: PBO:0075364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 4","termid":"PBO:0075364"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: PBO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic shuttling protein","termid":"PBO:0000205"}


id: GO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of self pollen by cells in the stigma, mediated by the sharing and interaction of the single locus incompatibility haplotypes.","definition_xrefs":["GOC:dph","PMID:34848142","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of self pollen","synonyms":[{"name":"self-incompatibility","type":"related"}],"termid":"GO:0060320"}


id: FYPO:0004631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis I","termid":"FYPO:0004938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during meiotic anaphase I","synonyms":[{"name":"decreased protein accumulation during meiotic anaphase I","type":"related"},{"name":"decreased protein level during anaphase of first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0004631"}


