# terms

id: PBO:0080236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitelline membrane outer layer 1 homolog","termid":"PBO:0080236"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.11","RHEA:21444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["MetaCyc:COUMARATE-REDUCTASE-RXN","KEGG_REACTION:R03709"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: SO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:regulatory_region_variant","type":"exact"},{"name":"VEP:regulatory_region_variant","type":"exact"},{"name":"regulatory region variant","type":"exact"},{"name":"regulatory_region_","type":"exact"},{"name":"snpEff:REGULATION","type":"exact"}],"termid":"SO:0001566"}


id: GO:1900646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"regulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900646"}


id: PBO:0052973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 3","termid":"PBO:0052973"}


id: PBO:0077506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 223","termid":"PBO:0077506"}


id: PR:Q10110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase I-specific transcription initiation factor RRN3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00921","PANTHER:PTHR12790:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.11c","secondary_identifiers":["UniProtKB:Q10110"],"synonyms":[{"name":"Spom972h-RRN3","type":"exact"}],"termid":"PR:Q10110"}


id: GO:0044135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host phyllosphere (obsolete GO:0044135)","termid":"GO:0044135"}


id: PBO:0064993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRCP pseudogene 1","termid":"PBO:0064993"}


id: PBO:0062286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 3","termid":"PBO:0062286"}


id: PBO:0059003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated D","termid":"PBO:0059003"}


id: MOD:01311
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["Unimod:61#K","PubMed:11698400","PubMed:11914093","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:01311"}


id: GO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:jl","GOC:nln","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine metabolic process","synonyms":[{"name":"acetylcholine metabolism","type":"exact"}],"termid":"GO:0008291"}


id: GO:0042934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of achromobactin, a citrate siderophore, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"achromobactin transmembrane transporter activity","synonyms":[{"name":"achromobactin transporter activity","type":"related"}],"termid":"GO:0042934"}


id: GO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Posterior movement of an organism, e.g. following the direction of the tail of an animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"backward locomotion","termid":"GO:0043057"}


id: PBO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O3B","termid":"PBO:0047823"}


id: MOD:01923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-aspartyl)-L-lysine and the release of water.","definition_xrefs":["RESID:AA0583","PubMed:15044436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-aspartyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S)-2-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"N(epsilon)-(alpha-aspartyl)lysine","type":"exact"},{"name":"N6-(L-aspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"alpha-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"aspartyl N6-lysine","type":"exact"}],"termid":"MOD:01923"}


id: FYPO:0008058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of a polyA robonuclease to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","definition_xrefs":["PMID:19307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal enzyme processivity","termid":"FYPO:0008057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased polyA ribonuclease processivity","termid":"FYPO:0008058"}


id: PBO:0003375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR3","termid":"PBO:0003375"}


id: PBO:0077275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14C","termid":"PBO:0077275"}


id: GO:0000467
data:
  {"annotated_genes":["SJAG_01818","SJAG_04006","SJAG_04824","SJAG_01191","SJAG_01521","SJAG_04369","SJAG_04321","SJAG_00081","SJAG_04818","SJAG_02993","SJAG_04084","SJAG_03745","SJAG_03179","SJAG_04153","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86107,88343,89165,92017,93347,95027,98159,100473,101317,102523,103519,104558,111499,111946,114320],"is_not":false,"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000467","terms_by_termid":{"GO:0000467":null}}


id: GO:1905880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of oogenesis","termid":"GO:1905879"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oogenesis","synonyms":[{"name":"down regulation of oogenesis","type":"exact"},{"name":"down regulation of ovum development","type":"exact"},{"name":"down-regulation of oogenesis","type":"exact"},{"name":"down-regulation of ovum development","type":"exact"},{"name":"downregulation of oogenesis","type":"exact"},{"name":"downregulation of ovum development","type":"exact"},{"name":"inhibition of oogenesis","type":"narrow"},{"name":"inhibition of ovum development","type":"narrow"},{"name":"negative regulation of ovum development","type":"exact"}],"termid":"GO:1905880"}


id: PBO:0057292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 510","termid":"PBO:0057292"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: FYPO:0003139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spore-like bodies that do not contain nuclei.","definition_xrefs":["PMID:8203159","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000121","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing anucleate spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing anucleate spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing anucleate spores","type":"related"}],"termid":"FYPO:0003139"}


id: GO:0010275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form NAD(P)H dehydrogenase complex, which is involved in electron transport from an unidentified electron donor, possibly NAD(P)H or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex assembly","synonyms":[{"name":"NAD(P)H dehydrogenase complex (plastoquinone) assembly","type":"narrow"}],"termid":"GO:0010275"}


id: GO:0007076
data:
  {"annotated_genes":["SJAG_03048","SJAG_01837","SJAG_03942","SJAG_03567","SJAG_03682","SJAG_00768","SJAG_03161","SJAG_00871","SJAG_01873","SJAG_05193","SJAG_05032","SJAG_00646","SJAG_00207","SJAG_03832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87892,93857,99260,100697,102255,108116,109456,111976,112591,113745],"is_not":false,"summary":null,"term":"GO:0007076"},{"annotations":[107750,84159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990893"},{"annotations":[98464,112741],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01837":null,"SJAG_01873":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03682":null,"SJAG_03832":null,"SJAG_03942":null,"SJAG_05032":null,"SJAG_05193":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007076","terms_by_termid":{"GO:0007076":null,"GO:1903380":null,"GO:1990893":null}}


id: PR:O94583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.11c","synonyms":[{"name":"Spom972h-SPCC1442.11c","type":"exact"}],"termid":"PR:O94583"}


id: GO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichyl diphosphate, a diphosphorylated dolichol derivative. In eukaryotes, these function as carriers of mono- and oligosaccharide residues in the glycosylation of lipids and proteins within intracellular membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dolichyl diphosphate metabolic process","synonyms":[{"name":"dolichyl diphosphate metabolism","type":"exact"}],"termid":"GO:0046465"}


id: GO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parathyroid hormone","synonyms":[{"name":"response to parathyroid hormone stimulus","type":"exact"}],"termid":"GO:0071107"}


id: PBO:0083264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 5% of ORF overlaps the verified gene IMP1","termid":"PBO:0083264"}


id: GO:0047980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzoylglycine + H2O = benzoate + glycine.","definition_xrefs":["RHEA:10424","EC:3.5.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"hippurate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R01424","MetaCyc:HIPPURATE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzoylamino-acid amidohydrolase activity","type":"related"},{"name":"benzoylglycine amidohydrolase activity","type":"related"},{"name":"hippuricase activity","type":"related"}],"termid":"GO:0047980"}


id: PBO:0109229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF4 pseudogene 1","termid":"PBO:0109229"}


id: PBO:0084925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monopolin; meiosis-specific kinetochore-associated protein involved in monopolar attachment of sister kinetochores to the meiotic spindle; subunit of monopolin, a complex that prevents biorientation of sister kinetochores to ensure homolog biorientation during meiosis I; regulates the conformation, enzyme kinetics and substrate specificity of the Dsn1p kinase, Hrr1p; expressed only during the first meiotic division","termid":"PBO:0084925"}


id: GO:1901910
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["PMID:10090752","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolism","type":"exact"}],"termid":"GO:1901910","terms_by_termid":{"GO:1901911":null}}


id: PBO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp4","termid":"PBO:0003773"}


id: GO:0061046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"}


id: PBO:0003660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex regulatory subunit Naa25","termid":"PBO:0003660"}


id: GO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The environmental space outside of an organism; this may be a host organism in the case of parasitic and symbiotic organisms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extraorganismal space","termid":"GO:0043245"}


id: GO:1904463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:26116408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"saponin biosynthetic process","termid":"GO:0016135"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside biosynthetic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside anabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside biosynthesis","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside formation","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside synthesis","type":"exact"}],"termid":"GO:1904463"}


id: GO:0004470
data:
  {"annotated_genes":["SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"}]},"cv_name":"molecular_function","definition":"Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02176":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"malic enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvic-malic carboxylase activity","type":"related"}],"termid":"GO:0004470","terms_by_termid":{"GO:0004471":null}}


id: GO:0085010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a secreted substance from the symbiont entering host cells via endocytosis of the substance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance entering host via endocytosis (obsolete GO:0085010)","termid":"GO:0085010"}


id: PR:O42901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC119.09c gene.","definition_xrefs":["UniProtKB:O42901","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.09c","synonyms":[{"name":"Spom972h-SPBC119.09c","type":"exact"}],"termid":"PR:O42901"}


id: GO:0004312
data:
  {"annotated_genes":["SJAG_04107","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93789,96825],"is_not":false,"summary":null,"term":"GO:0004312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+.","definition_xrefs":["EC:2.3.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"fatty acid synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14993","MetaCyc:FATTY-ACID-SYNTHASE-RXN","Reactome:R-HSA-75872"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing)","type":"related"},{"name":"fatty-acid synthase activity","type":"exact"}],"termid":"GO:0004312","terms_by_termid":{"GO:0004312":null}}


id: PBO:0076436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 12","termid":"PBO:0076436"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: FYPO:0006194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes one or two rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PomBase:mah","PMID:12456722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0006194"}


id: PBO:0076211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 21","termid":"PBO:0076211"}


id: GO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in an organ or tissues such as the liver, brain, mucosa, or nervous system tissues.","definition_xrefs":["GO_REF:0000022","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ or tissue specific immune response","synonyms":[{"name":"immune response in organ or tissue","type":"exact"}],"termid":"GO:0002251"}


id: PR:Q10436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.02c","synonyms":[{"name":"Spom972h-SPAC12B10.02c","type":"exact"}],"termid":"PR:Q10436"}


id: PBO:0012557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 5","termid":"PBO:0012557"}


id: PBO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complements S. cerevisiae RPB6","termid":"PBO:0016579"}


id: PR:Q9Y7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.16 gene.","definition_xrefs":["UniProtKB:Q9Y7X4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C365.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.16","synonyms":[{"name":"Spom972h-SPBC365.16","type":"exact"}],"termid":"PR:Q9Y7X4"}


id: SO:1000067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the deletion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000067 sequence_variant_causing_minus_1_frameshift (obsolete SO:1000067)","synonyms":[{"name":"minus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing minus 1 frameshift","type":"exact"}],"termid":"SO:1000067"}


id: GO:0019313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose metabolic process (obsolete GO:0019313)","synonyms":[{"name":"allose metabolism","type":"exact"}],"termid":"GO:0019313"}


id: PBO:0082834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; has similarity to human translation initiation factor 6 (eIF6); may be involved in the biogenesis and or stability of 60S ribosomal subunits","termid":"PBO:0082834"}


id: PBO:0074075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A48 antisense RNA 1","termid":"PBO:0074075"}


id: GO:0032161
data:
  {"annotated_genes":["SJAG_00118","SJAG_04703","SJAG_04470","SJAG_04375","SJAG_01769","SJAG_02645","SJAG_01658","SJAG_04566","SJAG_01277","SJAG_03374","SJAG_00663","SJAG_03703","SJAG_03688"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104023,96188,93993,108838,93917,114662,100000,113905,97035,97848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[112034,102072,90605,96194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032169"}]},"cv_name":"cellular_component","definition":"Any of a series of structures composed of septins and septin-associated proteins localized to the cleavage plane which are involved in cytokinesis.","definition_xrefs":["GOC:krc","PMID:16009555","PMID:12101122","PMID:15774761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cleavage apparatus septin structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032161","terms_by_termid":{"GO:0032169":null,"GO:0036391":null}}


id: PBO:0087980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(m(1)G37)methyltransferase; methylates a tRNA base adjacent to the anticodon that has a role in prevention of frameshifting; localized to both cytoplasm and mitochondria, and modifies both cytoplasmic and mitochondrial tRNAs; mutations in human ortholog TRMT5 are associated with skeletal muscle respiratory chain deficiencies, and trm5 mutations analogous to disease mutations decrease respiration","termid":"PBO:0087980"}


id: PBO:0031649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cellular_respiration","termid":"PBO:0031649"}


id: PBO:0053150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 7","termid":"PBO:0053150"}


id: PBO:0055880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4C","termid":"PBO:0055880"}


id: MOD:00785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N2-acetyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N2-acetyl-L-tryptophan","synonyms":[{"name":"AcTrp","type":"exact"}],"termid":"MOD:00785"}


id: RO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s is luminal space of x iff s is lumen_of x and s is an immaterial entity","direct_ancestors":[{"relation_name":"is_a","term_name":"lumen_of","termid":"RO:0002571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminal_space_of","termid":"RO:0002572"}


id: PBO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 2","termid":"PBO:0071704"}


id: PBO:0091008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase","termid":"PBO:0091008"}


id: GO:0140329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lysophospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:15661733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid translocation","termid":"GO:0045332"},{"relation_name":"is_a","term_name":"lysophospholipid transport","termid":"GO:0051977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"lysophospholipid translocation","termid":"GO:0140329"}


id: PBO:0054665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2071","termid":"PBO:0054665"}


id: GO:2001055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"positive regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001055"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: PBO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 29","termid":"PBO:0070356"}


id: RO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","termid":"RO:0002234"}


id: PBO:0066937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 239","termid":"PBO:0066937"}


id: PBO:0089824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 GEF Efc25","termid":"PBO:0089824"}


id: FYPO:0004306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CTD phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphatase activity","termid":"FYPO:0001757"},{"relation_name":"is_a","term_name":"abnormal CTD phosphatase activity","termid":"FYPO:0004305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased CTD phosphatase activity","synonyms":[{"name":"reduced CTD phosphatase activity","type":"exact"}],"termid":"FYPO:0004306"}


id: GO:0035154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in an open tracheal system becomes capable of differentiating autonomously into a terminal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. Terminal cells send long and bifurcated hollow branches toward target tissues to allow oxygen exchange.","definition_xrefs":["PMID:10684581","PMID:11063940","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell type specification, open tracheal system","termid":"GO:0035153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal cell fate specification, open tracheal system","synonyms":[{"name":"terminal cell fate specification","type":"exact"}],"termid":"GO:0035154"}


id: PATO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000966 symmetry value (obsolete PATO:0000966)","termid":"PATO:0000966"}


id: PBO:0108899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 12","termid":"PBO:0108899"}


id: GO:0004433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class I PI3K activated via heterotrimeric G-proteins.","definition_xrefs":["PMID:11050418"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-4-phosphate kinase, class IB (obsolete GO:0004433)","synonyms":[{"name":"1-phosphatidylinositol-4-phosphate kinase, class IB","type":"exact"}],"termid":"GO:0004433"}


id: GO:0009341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses beta-galactosidase activity, i.e. catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. In E. coli, the complex is a homotetramer; dimeric and hexameric beta-galactosidase complexes have been observed in other species.","definition_xrefs":["PMID:15950161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"beta-galactosidase complex","termid":"GO:0009341"}


id: PBO:0005314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23 (predicted)","termid":"PBO:0005314"}


id: PBO:0065542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotriesterase related","termid":"PBO:0065542"}


id: PBO:0079302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 1","termid":"PBO:0079302"}


id: PBO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd2","termid":"PBO:0002443"}


id: PR:Q9P801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L9-like mitochondrial ribosomal protein SPCC777.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.17c","synonyms":[{"name":"54S ribosomal protein L9, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"Spom972h-SPCC777.17c","type":"exact"}],"termid":"PR:Q9P801"}


id: PBO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 36","termid":"PBO:0046242"}


id: GO:0097109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuroligin protein family, neuronal cell surface proteins that mediate synapse formation.","definition_xrefs":["GOC:pr","GOC:sjp","PMID:21424692","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neuroligin family protein binding","termid":"GO:0097109"}


id: PBO:0043041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHN2 antisense RNA 1","termid":"PBO:0043041"}


id: PBO:0079045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-7","termid":"PBO:0079045"}


id: PBO:0082658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; this complex has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs through deadenylation; basal transcription factor","termid":"PBO:0082658"}


id: GO:1902097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in defense response to Gram-negative bacterium.","definition_xrefs":["GOC:TermGenie","PMID:17183709","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium (obsolete GO:1902097)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1902097"}


id: GO:0045793
data:
  {"annotated_genes":["SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89905],"is_not":false,"summary":null,"term":"GO:0045793"}]},"cv_name":"biological_process","definition":"Any process that increases cell size.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell size","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell size","type":"narrow"},{"name":"stimulation of cell size","type":"narrow"},{"name":"up regulation of cell size","type":"exact"},{"name":"up-regulation of cell size","type":"exact"},{"name":"upregulation of cell size","type":"exact"}],"termid":"GO:0045793","terms_by_termid":{"GO:0045793":null}}


id: FYPO:0006706
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0000707","FYPO:0002114","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: PBO:0074711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74C-1","termid":"PBO:0074711"}


id: GO:0036510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:20065073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum mannose trimming","termid":"GO:1904380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimming of terminal mannose on C branch","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8C","type":"related"},{"name":"glycoprotein mannose trimming on C branch","type":"exact"}],"termid":"GO:0036510"}


id: GO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound catabolic process","synonyms":[{"name":"flavin-containing compound catabolic process breakdown","type":"exact"},{"name":"flavin-containing compound catabolic process degradation","type":"exact"},{"name":"flavin-containing compound catabolism","type":"exact"},{"name":"riboflavin and derivative catabolic process","type":"related"},{"name":"riboflavin and derivative catabolism","type":"related"},{"name":"vitamin B2 and derivative catabolic process","type":"related"},{"name":"vitamin B2 and derivative catabolism","type":"related"}],"termid":"GO:0042728"}


id: PBO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1 (predicted)","termid":"PBO:0018083"}


id: GO:0001529
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elastin (obsolete GO:0001529)","synonyms":[{"name":"elastin","type":"exact"}],"termid":"GO:0001529"}


id: PBO:0069761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1044, pseudogene","termid":"PBO:0069761"}


id: PATO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral","termid":"PATO:0000634"}


id: GO:0010459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate","termid":"GO:0010459"}


id: PBO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transporter Ctr6","termid":"PBO:0003903"}


id: MOD:00194
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an amino-terminal lactic acid.","definition_xrefs":["RESID:AA0186","Unimod:403#S","PubMed:7607233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactic acid","synonyms":[{"name":"(2R)-2-hydroxypropanoic acid","type":"exact"},{"name":"2-hydroxypropionic acid","type":"exact"},{"name":"Lac(Ser)","type":"exact"},{"name":"MOD_RES Lactic acid","type":"exact"},{"name":"Ser->LacticAcid","type":"related"},{"name":"alpha-hydroxypropionic acid","type":"exact"},{"name":"lactic acid","type":"exact"},{"name":"lactic acid from N-term Ser","type":"related"}],"termid":"MOD:00194"}


id: PBO:0080573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing planar cell polarity effector","termid":"PBO:0080573"}


id: PBO:0054202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1582","termid":"PBO:0054202"}


id: GO:0030956
data:
  {"annotated_genes":["SJAG_05560","SJAG_01577","SJAG_02721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92759,107351,114424],"is_not":false,"summary":null,"term":"GO:0030956"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses glutamyl-tRNA(Gln) amidotransferase activity, and therefore creates Gln-tRNA by amidating Glu-tRNA; usually composed of 3 subunits: A, B, and C. Note that the C subunit may not be required in all organisms.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamyl-tRNA(Gln) amidotransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AdT","type":"related"},{"name":"GatCAB","type":"narrow"},{"name":"GatFAB","type":"narrow"}],"termid":"GO:0030956","terms_by_termid":{"GO:0030956":null}}


id: PBO:0040389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit C1","termid":"PBO:0040389"}


id: PBO:0084732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; transports oxaloacetate, sulfate, thiosulfate, and isopropylmalate; member of the mitochondrial carrier family","termid":"PBO:0084732"}


id: FYPO:0007550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to hydroxyurea.","definition_xrefs":["PMID:19158664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to hydroxyurea","synonyms":[{"name":"increased number of Rad22 foci during cellular response to hydroxyurea","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to HU","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007550"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: GO:1900661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"regulation of emericellamide A biosynthetic process","synonyms":[{"name":"regulation of emericellamide A synthesis","type":"exact"},{"name":"regulation of emericellamide A anabolism","type":"exact"},{"name":"regulation of emericellamide A biosynthesis","type":"exact"},{"name":"regulation of emericellamide A formation","type":"exact"}],"termid":"GO:1900661"}


id: GO:1900813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"monodictyphenone metabolic process","synonyms":[{"name":"monodictyphenone metabolism","type":"exact"}],"termid":"GO:1900813"}


id: PBO:0053014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 1","termid":"PBO:0053014"}


id: PBO:0071871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 9","termid":"PBO:0071871"}


id: PBO:0026926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026926"}


id: PBO:0066662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor interacting serine/threonine kinase 3","termid":"PBO:0066662"}


id: PBO:0059773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 47","termid":"PBO:0059773"}


id: PBO:0078087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 4","termid":"PBO:0078087"}


id: PBO:0086548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene","termid":"PBO:0086548"}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: GO:1903011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone development.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:22510437","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of bone development","termid":"GO:1903010"},{"relation_name":"negatively_regulates","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone development","synonyms":[{"name":"down regulation of bone development","type":"exact"},{"name":"down-regulation of bone development","type":"exact"},{"name":"downregulation of bone development","type":"exact"},{"name":"inhibition of bone development","type":"narrow"}],"termid":"GO:1903011"}


id: PBO:0082119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine","termid":"PBO:0082119"}


id: PBO:0075767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrate, RNA effector molecule","termid":"PBO:0075767"}


id: PBO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38 (non-functional)","termid":"PBO:0051158"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: FYPO:0000358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells do not form mating projections.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"shmoo absent","synonyms":[{"name":"absent mating projection morphology","type":"exact"},{"name":"mating projection absent","type":"exact"},{"name":"mating projection morphology: absent","type":"related"}],"termid":"FYPO:0000358"}


id: GO:0000073
data:
  {"annotated_genes":["SJAG_00773","SJAG_04745","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74671,90871,91412],"is_not":false,"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"The release of duplicated mitotic spindle pole bodies (SPBs) that begins with the nucleation of microtubules from each SPB within the nucleus, leading to V-shaped spindle microtubules. Interpolar microtubules that elongate from each pole are interconnected, forming overlapping microtubules. Capturing and antiparallel sliding apart of microtubules promotes the initial separation of the SPB.","definition_xrefs":["GOC:sgd_curators","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"},{"relation_name":"part_of","term_name":"mitotic spindle pole body organization","termid":"GO:1905047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150","GO:0007010","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"initial mitotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030475"],"termid":"GO:0000073","terms_by_termid":{"GO:0000073":null}}


id: PBO:0005200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12 small nucleolar RNA/small nucleolar RNA snR99","termid":"PBO:0005200"}


id: PBO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural cell adhesion molecule 2","termid":"PBO:0060594"}


id: PBO:0027339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-cysteine_ligase_activity","termid":"PBO:0027339"}


id: GO:0008116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin I(2).","definition_xrefs":["RHEA:23580","EC:5.3.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-I synthase activity","secondary_identifiers":["Reactome:R-HSA-76496","KEGG_REACTION:R02267","MetaCyc:PROSTAGLANDIN-I-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate 6-isomerase activity","type":"related"},{"name":"PGI(2) synthase activity","type":"related"},{"name":"PGI(2) synthetase activity","type":"related"},{"name":"PGI2 synthase activity","type":"related"},{"name":"PGI2 synthetase activity","type":"related"},{"name":"cytochrome P450 CYP8A1","type":"narrow"},{"name":"prostacyclin synthase activity","type":"related"},{"name":"prostacycline synthetase activity","type":"related"},{"name":"prostagladin I2 synthetase activity","type":"related"}],"termid":"GO:0008116"}


id: PBO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementing genes are not orthologous","termid":"PBO:0001003"}


id: GO:0038200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ethylene and transmitting the signal within the cell to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:signaling","PMID:22467798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene receptor activity","termid":"GO:0038199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ethylene receptor histidine kinase activity","termid":"GO:0038200"}


id: PBO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 27","termid":"PBO:0071304"}


id: GO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc growth","termid":"GO:0045570"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"imaginal disc growth","termid":"GO:0007446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc growth","synonyms":[{"name":"down regulation of imaginal disc growth","type":"exact"},{"name":"down-regulation of imaginal disc growth","type":"exact"},{"name":"downregulation of imaginal disc growth","type":"exact"},{"name":"inhibition of imaginal disc growth","type":"narrow"}],"termid":"GO:0045571"}


id: GO:1904092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GOC:bhm","GOC:TermGenie","PMID:25736836","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of autophagic cell death","synonyms":[{"name":"regulation of autophagic death","type":"broad"},{"name":"regulation of programmed cell death by autophagy","type":"broad"},{"name":"regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"regulation of type II programmed cell death","type":"related"}],"termid":"GO:1904092"}


id: GO:0102156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + UDP-alpha-D-glucose = 2,5-dihydroxybenzoate 5-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"2,5-DHBA UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11705"],"termid":"GO:0102156"}


id: PBO:0091956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L9","termid":"PBO:0091956"}


id: PBO:0075095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 144","termid":"PBO:0075095"}


id: PBO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tacrolimus_during_salt_stress","termid":"PBO:0030456"}


id: PBO:0091139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein","termid":"PBO:0091139"}


id: PBO:0044525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dachshund family transcription factor 2","termid":"PBO:0044525"}


id: PBO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase domain containing 1","termid":"PBO:0043008"}


id: PATO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance to a stimulus which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"resistant to","termid":"PATO:0001178"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased resistance to","synonyms":[{"name":"decreased resistance","type":"exact"},{"name":"low resistance to","type":"exact"}],"termid":"PATO:0001651"}


id: PBO:0073965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 14","termid":"PBO:0073965"}


id: GO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization involved in establishment of planar polarity","synonyms":[{"name":"protein localisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090251"}


id: PBO:0078763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 6","termid":"PBO:0078763"}


id: PBO:0061457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin receptor associated death domain, pseudogene","termid":"PBO:0061457"}


id: GO:0032303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of an icosanoid from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"regulates","term_name":"icosanoid secretion","termid":"GO:0032309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of icosanoid secretion","synonyms":[{"name":"regulation of eicosanoid secretion","type":"exact"}],"termid":"GO:0032303"}


id: PBO:0054935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2349","termid":"PBO:0054935"}


id: GO:1902891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of root hair elongation.","definition_xrefs":["PMID:22329353","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of root hair elongation","termid":"GO:1902890"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of root hair elongation","synonyms":[{"name":"down regulation of root hair elongation","type":"exact"},{"name":"down-regulation of root hair elongation","type":"exact"},{"name":"downregulation of root hair elongation","type":"exact"},{"name":"inhibition of root hair elongation","type":"narrow"}],"termid":"GO:1902891"}


id: PBO:0003651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein Rsp1","termid":"PBO:0003651"}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: PBO:0057315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518b","termid":"PBO:0057315"}


id: PBO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin 5","termid":"PBO:0003944"}


id: PBO:0109367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4","termid":"PBO:0109367"}


id: FYPO:0001831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}


id: PR:Q9UR39
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hst4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent protein deacetylase hst4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.04c","synonyms":[{"name":"Spom972h-hst4","type":"exact"},{"name":"homologous to SIR2 protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulatory protein SIR2 homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR39"}


id: GO:0050160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + orsellinate depside = 2 o-orsellinate + H+.","definition_xrefs":["RHEA:19549","EC:3.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"orsellinate-depside hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00054","MetaCyc:ORSELLINATE-DEPSIDE-HYDROLASE-RXN"],"synonyms":[{"name":"lecanorate hydrolase activity","type":"related"}],"termid":"GO:0050160"}


id: PBO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marginal zone B and B1 cell specific protein","termid":"PBO:0060387"}


id: GO:0004776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate.","definition_xrefs":["RHEA:22120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase activity","termid":"GO:0004774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate-CoA ligase (GDP-forming) activity","secondary_identifiers":["Reactome:R-HSA-71775","MetaCyc:SUCCINATE--COA-LIGASE-GDP-FORMING-RXN","EC:6.2.1.4","KEGG_REACTION:R00432"],"synonyms":[{"name":"succinate:CoA ligase (GDP-forming) activity","type":"related"},{"name":"succinyl CoA synthetase activity","type":"related"},{"name":"succinyl coenzyme A synthetase","type":"broad"},{"name":"succinyl coenzyme A synthetase (GDP-forming) activity","type":"related"},{"name":"succinyl coenzyme A synthetase (guanosine diphosphate-forming) activity","type":"related"},{"name":"succinyl-CoA synthetase (GDP-forming) activity","type":"related"}],"termid":"GO:0004776"}


id: PBO:0054178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1551","termid":"PBO:0054178"}


id: PBO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Activating Protein","termid":"PBO:0003398"}


id: PBO:0057764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2053","termid":"PBO:0057764"}


id: GO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.","definition_xrefs":["PMID:15239959","GOC:vk","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway","synonyms":[{"name":"semaphorin-plexin signalling pathway","type":"exact"}],"termid":"GO:0071526"}


id: PBO:0047499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap structure-specific endonuclease 1","termid":"PBO:0047499"}


id: PBO:0056182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFG antisense RNA 1","termid":"PBO:0056182"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: GO:0080035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progoitrin, a 2-hydroxy-but-3-enyl glucosinolate. Glucosinolates are substituted thioglucosides found in rapeseed products and related cruciferae, and progoitrin has been implicated in causing goiters in mammals and bitter taste in cruciferous vegetables.","definition_xrefs":["PMID:11560911","PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"2-hydroxy-but-3-enyl glucosinolate biosynthetic process","synonyms":[{"name":"2-hydroxy-but-3-enyl glucosinolate anabolism","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate biosynthesis","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate formation","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate synthesis","type":"exact"},{"name":"progoitrin biosynthesis","type":"exact"},{"name":"progoitrin biosynthetic process","type":"exact"},{"name":"progoitrin synthesis","type":"exact"}],"termid":"GO:0080035"}


id: PBO:0086278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in cell survival pathways; required for the diauxic growth shift; expression in mammalian cells increases survival under conditions inducing apoptosis; mutant has increased aneuploidy tolerance","termid":"PBO:0086278"}


id: PR:O94306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.19","synonyms":[{"name":"Spom972h-rpp21","type":"exact"}],"termid":"PR:O94306"}


id: PBO:0064002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 36","termid":"PBO:0064002"}


id: GO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: PBO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 4","termid":"PBO:0044420"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: PBO:0085485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processing alpha glucosidase I; ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress","termid":"PBO:0085485"}


id: PBO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF14 intronic transcript 1","termid":"PBO:0047564"}


id: PBO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member E","termid":"PBO:0043281"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0061024","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: GO:1900686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of gerfelin biosynthetic process","synonyms":[{"name":"regulation of gerfelin anabolism","type":"exact"},{"name":"regulation of gerfelin biosynthesis","type":"exact"},{"name":"regulation of gerfelin formation","type":"exact"},{"name":"regulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900686"}


id: PBO:0075961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD3 N-terminal like","termid":"PBO:0075961"}


id: PBO:0058569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511a-1","termid":"PBO:0058569"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: CHEBI:17234
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose","termid":"CHEBI:17234"}


id: PBO:0052477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 3","termid":"PBO:0052477"}


id: PBO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 14","termid":"PBO:0046572"}


id: PBO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 divergent transcript","termid":"PBO:0052602"}


id: GO:1905218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22309505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to astaxanthin","termid":"GO:1905217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to astaxanthin","synonyms":[{"name":"cellular response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905218"}


id: PBO:0057694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-2","termid":"PBO:0057694"}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: PBO:0051498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 22","termid":"PBO:0051498"}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: PBO:0073491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate lyase 1","termid":"PBO:0073491"}


id: PBO:0076067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG3 antisense RNA 1","termid":"PBO:0076067"}


id: PBO:0043454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 3 pseudogene 1","termid":"PBO:0043454"}


id: GO:0031676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pigmented membrane of a plasma membrane-derived thylakoid.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"is_a","term_name":"plasma membrane-derived chromatophore membrane","termid":"GO:0042717"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005737","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid membrane","synonyms":[{"name":"plasma membrane thylakoid membrane","type":"exact"}],"termid":"GO:0031676"}


id: PBO:0011478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent) (predicted)","termid":"PBO:0011478"}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115210,115211],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115203],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0067628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 800, pseudogene","termid":"PBO:0067628"}


id: PBO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 37","termid":"PBO:0071899"}


id: FYPO:0003377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to nitrosative stress is lower than normal. Total RNA or a specific RNA may be affected. Nitrosative stress often results from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:20204527","PomBase:mah","GO:0071500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to nitrosative stress","synonyms":[{"name":"decreased RNA accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to nitrosative stress","type":"narrow"},{"name":"decreased transcript level during cellular response to nitrosative stress","type":"exact"},{"name":"reduced RNA level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003377"}


id: GO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transforming growth factor beta receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta receptor binding","type":"exact"},{"name":"TGFbeta receptor binding","type":"exact"},{"name":"activin","type":"related"},{"name":"inhibin","type":"related"},{"name":"transforming growth factor beta","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"},{"name":"transforming growth factor beta receptor anchoring activity","type":"related"},{"name":"transforming growth factor beta receptor ligand","type":"narrow"}],"termid":"GO:0005160"}


id: PBO:0048518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 1","termid":"PBO:0048518"}


id: GO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein involved in an antiviral response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete antiviral response protein activity (obsolete GO:0003800)","synonyms":[{"name":"antiviral response protein activity","type":"exact"}],"termid":"GO:0003800"}


id: GO:1903471
data:
  {"annotated_genes":["SJAG_03631","SJAG_04597","SJAG_03936","SJAG_00845","SJAG_04776","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[90515,90683,109433,106594,83686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["PMID:1234","GOC:TermGenie","GOC:mtg_cell_cycle","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin contractile ring contraction","termid":"GO:0031991"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903471","terms_by_termid":{"GO:1903472":null,"GO:1903473":null}}


id: GO:1902275
data:
  {"annotated_genes":["SJAG_02990","SJAG_01599","SJAG_02622","SJAG_02381","SJAG_01511","SJAG_02342","SJAG_04369","SJAG_02592","SJAG_02723","SJAG_03664","SJAG_03624","SJAG_01867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[104559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[95051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[106414,90476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[94665,86932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[96383,93294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[113789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[113790,114142,96384,93295,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:vw","PMID:18314879","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903308","GO:0001672"],"synonyms":[{"name":"regulation of chromatin assembly or disassembly","type":"related"},{"name":"regulation of chromatin assembly/disassembly","type":"related"},{"name":"regulation of chromatin modification","type":"related"},{"name":"regulation of chromatin organisation","type":"exact"},{"name":"regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1902275","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090055":null,"GO:1902801":null}}


id: PBO:0033771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033771"}


id: GO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 3-(2,3-dihydroxyphenyl)propanoate = 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate.","definition_xrefs":["EC:1.13.11.16","MetaCyc:1.13.11.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-carboxyethylcatechol 2,3-dioxygenase activity","secondary_identifiers":["RHEA:23840","GO:0008669"],"synonyms":[{"name":"2,3-dihydroxy-beta-phenylpropionate oxygenase activity","type":"related"},{"name":"2,3-dihydroxy-beta-phenylpropionic dioxygenase activity","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"3-(2,3-dihydroxyphenyl)propanoate:oxygen 1,2-oxidoreductase activity","type":"related"}],"termid":"GO:0047070"}


id: PBO:0027964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_nitrogen_starvation","termid":"PBO:0027964"}


id: GO:0097526
data:
  {"annotated_genes":["SJAG_02843","SJAG_03369","SJAG_02295","SJAG_00989","SJAG_01634","SJAG_02304","SJAG_00414","SJAG_00147","SJAG_01308","SJAG_03469","SJAG_00643","SJAG_00531","SJAG_05240","SJAG_04529","SJAG_01327","SJAG_01870","SJAG_04497","SJAG_02279","SJAG_04433","SJAG_02469","SJAG_02455","SJAG_03070","SJAG_04538","SJAG_04405","SJAG_03954","SJAG_01301","SJAG_04222","SJAG_03460","SJAG_01819","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106135,98268,89045,89410,111931,91711,94113,107771,104602,102403,91028,96707,110425,107201,91653,101891,91283,110925,98627,102613,101935,94879,89206,85660,108949,111271,112469,106701,91929,110999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4/U6 (or U4atac/U6atac) snRNP with the U5 snRNP.","definition_xrefs":["PMID:9452384","GOC:pr","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"spliceosomal tri-snRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097526","terms_by_termid":{"GO:0046540":null}}


id: PBO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga3","termid":"PBO:0002853"}


id: PBO:0004124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Mug164","termid":"PBO:0004124"}


id: PBO:0087620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling; functional equivalent of canonical Csn6 subunit of the COP9 signalosome","termid":"PBO:0087620"}


id: PBO:0054103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1465","termid":"PBO:0054103"}


id: PATO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having thin filamentous extensions at its edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamentous","termid":"PATO:0001360"}


id: PBO:0090821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp9","termid":"PBO:0090821"}


id: FYPO:0008034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 7 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32282918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 7 residues during vegetative growth","termid":"FYPO:0008034"}


id: GO:0098528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube differentiation","termid":"GO:0014902"},{"relation_name":"is_a","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}


id: PBO:0058077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4295","termid":"PBO:0058077"}


id: PR:P40849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An M-factor precursor mfm3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["UniProtKB:P40849","PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"M-factor precursor mfm3","termid":"PR:000025005"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"Spom972h-mfm3","type":"exact"}],"termid":"PR:P40849"}


id: GO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["PMID:11181628","PMID:11449884","GOC:mtg_muscle","PMID:12605307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber adaptation","synonyms":[{"name":"skeletal muscle fiber plasticity","type":"related"},{"name":"skeletal muscle fibre plasticity","type":"exact"},{"name":"skeletal myofiber plasticity","type":"exact"},{"name":"skeletal myofibre plasticity","type":"exact"}],"termid":"GO:0043503"}


id: PBO:0065779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 2","termid":"PBO:0065779"}


id: PBO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase (predicted)","termid":"PBO:0003423"}


id: PBO:0028018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CAAX-protein_geranylgeranyltransferase_activity","termid":"PBO:0028018"}


id: PBO:0083781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083781"}


id: PBO:0049369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2 pseudogene 1","termid":"PBO:0049369"}


id: GO:0010225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 280 nm.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-C","synonyms":[{"name":"response to UV-C light stimulus","type":"exact"},{"name":"response to UV-C radiation stimulus","type":"exact"},{"name":"response to UVC light stimulus","type":"exact"},{"name":"response to UVC radiation stimulus","type":"exact"},{"name":"response to germicidal ultraviolet light stimulus","type":"exact"},{"name":"response to germicidal ultraviolet radiation stimulus","type":"exact"},{"name":"response to shortwave ultraviolet light stimulus","type":"exact"},{"name":"response to shortwave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0010225"}


id: PBO:0075024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-35","termid":"PBO:0075024"}


id: GO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectoine metabolic process","termid":"GO:0042399"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"ectoine catabolic process","synonyms":[{"name":"ectoine breakdown","type":"exact"},{"name":"ectoine catabolism","type":"exact"},{"name":"ectoine degradation","type":"exact"}],"termid":"GO:0042400"}


id: PBO:0068457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 33, pseudogene","termid":"PBO:0068457"}


id: GO:1903404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal phosphate excretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:pm","PMID:8700837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal phosphate excretion","termid":"GO:1903402"},{"relation_name":"positively_regulates","term_name":"renal phosphate excretion","termid":"GO:0044722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal phosphate excretion","synonyms":[{"name":"activation of renal phosphate excretion","type":"narrow"},{"name":"activation of renal phosphate ion excretion","type":"narrow"},{"name":"positive regulation of renal phosphate ion excretion","type":"exact"},{"name":"up regulation of renal phosphate excretion","type":"exact"},{"name":"up regulation of renal phosphate ion excretion","type":"exact"},{"name":"up-regulation of renal phosphate excretion","type":"exact"},{"name":"up-regulation of renal phosphate ion excretion","type":"exact"},{"name":"upregulation of renal phosphate excretion","type":"exact"},{"name":"upregulation of renal phosphate ion excretion","type":"exact"}],"termid":"GO:1903404"}


id: GO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"GPI anchor binding","synonyms":[{"name":"glycosylphosphatidylinositol binding","type":"exact"}],"termid":"GO:0034235"}


id: PBO:0051119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-4 (pseudogene)","termid":"PBO:0051119"}


id: GO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-glutamate import across plasma membrane","termid":"GO:0002037"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"negatively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of glutamate reuptake","type":"exact"},{"name":"negative regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of glutamate uptake involved in conduction of nerve impulse","type":"related"}],"termid":"GO:0051948"}


id: FYPO:0004186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing myriocin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal vegetative growth on myriocin","synonyms":[{"name":"normal cellular response to myriocin during vegetative growth","type":"related"},{"name":"normal vegetative cell population growth in presence of myriocin","type":"exact"},{"name":"normal vegetative cell population growth on myriocin","type":"exact"},{"name":"normal vegetative growth on myriocin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004186"}


id: PR:O42862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg14 gene.","definition_xrefs":["UniProtKB:O42862","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.02","synonyms":[{"name":"Spom972h-atg14","type":"exact"}],"termid":"PR:O42862"}


id: PBO:0084241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0084241"}


id: PR:Q9P6N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine aspartase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10188:SF8","OMA:SCHPO01085","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.09c","secondary_identifiers":["UniProtKB:Q9P6N7"],"synonyms":[{"name":"Spom972h-TASP1","type":"exact"},{"name":"taspase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N7"}


id: PBO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcript accumulates in response to any combination of stress conditions","termid":"PBO:0086024"}


id: GO:0099160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intermediate filament cytoskeleton that is part of a postsynapse.","definition_xrefs":["GOC:dos","PMID:25869803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton","termid":"GO:0045111"},{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton","termid":"GO:0099571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic intermediate filament cytoskeleton","termid":"GO:0099160"}


id: SO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TTTRTTTACA, bound by transcription factors with a forkhead DNA-binding domain.","definition_xrefs":["PMID:15195092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead_motif","synonyms":[{"name":"forkhead motif","type":"exact"}],"termid":"SO:0001847"}


id: PBO:0044620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCC netrin 1 receptor","termid":"PBO:0044620"}


id: GO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.","definition_xrefs":["PMID:23644055","GOC:sl","PMID:25934034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to environmental enrichment","synonyms":[{"name":"response to the introduction of novel objects","type":"narrow"}],"termid":"GO:0090648"}


id: PBO:0051592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 21","termid":"PBO:0051592"}


id: MOD:00744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification containing a molybdenum atom in a pterin ring system.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum containing modified residue","termid":"MOD:00743"},{"relation_name":"is_a","term_name":"pterin modified residue","termid":"MOD:00748"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum pterin containing modification","synonyms":[{"name":"MoPterRes","type":"exact"}],"termid":"MOD:00744"}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: GO:0016201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism recognizes chemorepellent signals that inhibit its growth toward the source.","definition_xrefs":["ISBN:0878932437","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"synaptic target recognition","termid":"GO:0008039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target inhibition","termid":"GO:0016201"}


id: PBO:0014236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase involved in ubiquitin-mediated protein degradation Cdc48","termid":"PBO:0014236"}


id: GO:0003386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amphid sensory organ over time, from its formation to the mature structure. Amphid sensory organs are the sensory organs of nematodes.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amphid sensory organ development","termid":"GO:0003386"}


id: PBO:0027643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_alpha-galactosidase_activity","termid":"PBO:0027643"}


id: PBO:0034399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_formation_of","termid":"PBO:0034399"}


id: FYPO:0002457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable curved vegetative cell with abnormal septum","termid":"FYPO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"viable curved elongated vegetative cell with abnormal septum","synonyms":[{"name":"curved elongated viable cell with abnormal septum","type":"exact"},{"name":"viable curved elongated abnormally septated vegetative cell","type":"exact"},{"name":"viable curved elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002457"}


id: PBO:0049282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 1","termid":"PBO:0049282"}


id: GO:0005550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odorant binding","termid":"GO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pheromone binding","termid":"GO:0005550"}


id: PBO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 12","termid":"PBO:0061956"}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: FYPO:0008015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glucose into the cell is decreased with respect to wild-type.","definition_xrefs":["PomBase:mlr","PMID:35781263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased glucose import","termid":"FYPO:0008015"}


id: PBO:0051788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCF5 antisense RNA 1","termid":"PBO:0051788"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005568","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: GO:0042349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The orientation of free radical substrates in such a way that only a particular stereoisomer is synthesized by an enzyme. Best characterized as a function during lignan biosynthesis.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"guiding stereospecific synthesis activity","synonyms":[{"name":"dirigent protein","type":"narrow"}],"termid":"GO:0042349"}


id: GO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart process","synonyms":[{"name":"cardiac process","type":"related"}],"termid":"GO:0003015"}


id: PBO:0110335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1F pseudogene 1","termid":"PBO:0110335"}


id: PBO:0005093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAZ domain","termid":"PBO:0005093"}


id: PBO:0057331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520f","termid":"PBO:0057331"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: GO:2000435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein neddylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification by small protein conjugation or removal","termid":"GO:1903321"},{"relation_name":"is_a","term_name":"regulation of protein neddylation","termid":"GO:2000434"},{"relation_name":"negatively_regulates","term_name":"protein neddylation","termid":"GO:0045116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein neddylation","synonyms":[{"name":"negative regulation of RUB1-protein conjugation","type":"exact"}],"termid":"GO:2000435"}


id: GO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"leukotriene catabolic process","synonyms":[{"name":"leukotriene breakdown","type":"exact"},{"name":"leukotriene catabolism","type":"exact"},{"name":"leukotriene degradation","type":"exact"}],"termid":"GO:0036100"}


id: PBO:0028683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope,_with_spindle_pole_body_in_nucleoplasm","termid":"PBO:0028683"}


id: PBO:0031007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus","termid":"PBO:0031007"}


id: GO:0042049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of acyl-CoA within a cell.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular acyl-CoA homeostasis","synonyms":[{"name":"cell acyl-CoA homeostasis","type":"exact"},{"name":"cellular acyl-CoA homeostasis","type":"exact"}],"termid":"GO:0042049"}


id: FYPO:0001941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cerulenin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to cerulenin","synonyms":[{"name":"resistance to cerulenin during mitotic cell cycle","type":"related"},{"name":"resistance to cerulenin during vegetative growth","type":"exact"},{"name":"resistant to cerulenin","type":"exact"}],"termid":"FYPO:0001941"}


id: GO:0052339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cell wall of other organism involved in symbiotic interaction (obsolete GO:0052339)","synonyms":[{"name":"disassembly by organism of cell wall of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052339"}


id: PBO:0082868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core subunit of the RENT complex; involved in nucleolar silencing and telophase exit; stimulates transcription by RNA polymerase I and regulates nucleolar structure; NET1 has a paralog, TOF2, that arose from the whole genome duplication","termid":"PBO:0082868"}


id: GO:0140862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-119 residue.","definition_xrefs":["PMID:25470042","PMID:28624371","PMID:22844243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0019787","GO:0016740","GO:0004842","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H2AK119 ubiquitin ligase activity","synonyms":[{"name":"histone H2A-K119 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K119 specific)","type":"exact"}],"termid":"GO:0140862"}


id: PBO:0071636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 55","termid":"PBO:0071636"}


id: PBO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in M-type mating cells","termid":"PBO:0002753"}


id: SO:1001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of +1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translationally_frameshifted","synonyms":[{"name":"plus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001263"}


id: PBO:0024854
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cowden syndrome","termid":"PBO:0024854"}


id: FYPO:0001885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein phosphorylation during salt stress","synonyms":[{"name":"decreased protein phosphorylation during salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during salt stress during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during salt stress","type":"exact"}],"termid":"FYPO:0001885"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: GO:0030307
data:
  {"annotated_genes":["SJAG_02392","SJAG_02723","SJAG_03581","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102719],"is_not":false,"summary":null,"term":"GO:0030307"},{"annotations":[90680,85994,91951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell growth","type":"narrow"},{"name":"stimulation of cell growth","type":"narrow"},{"name":"up regulation of cell growth","type":"exact"},{"name":"up-regulation of cell growth","type":"exact"},{"name":"upregulation of cell growth","type":"exact"}],"termid":"GO:0030307","terms_by_termid":{"GO:0030307":null,"GO:0051519":null}}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: FYPO:0007860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body (SPB) duplicates normally, and the SPBs separate, in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with each DNA mass associated with an SPB.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:20967237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"spindle pole body separation in absence of mitotic spindle","synonyms":[{"name":"SPB separation in absence of mitotic spindle","type":"exact"},{"name":"spindle pole body separation in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"spindle pole body separation in absence of mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007860"}


id: PBO:0059623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 4","termid":"PBO:0059623"}


id: GO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of C4 photosynthesis, as it occurs in plants in which the enzyme decarboxylating C4 acids in the bundle sheath is NAD-malic enzyme.","definition_xrefs":["PMID:11788762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4 photosynthesis","termid":"GO:0009760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"NAD-malic enzyme C4 photosynthesis","termid":"GO:0009763"}


id: GO:0098915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"is_a","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization during ventricular cardiac muscle cell action potential","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0098915"}


id: PBO:0051744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 10","termid":"PBO:0051744"}


id: FYPO:0006766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PomBase:mah","PMID:10521402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during meiotic cell cycle","termid":"FYPO:0005577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"decreased protein phosphorylation with abolished meiotic DNA replication checkpoint arrest","type":"exact"},{"name":"reduced protein phosphorylation in absence of meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006766"}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: PBO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 21","termid":"PBO:0071723"}


id: GO:2000999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"positively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellulose catabolic process","synonyms":[{"name":"positive regulation of cellulose breakdown","type":"exact"},{"name":"positive regulation of cellulose catabolism","type":"exact"},{"name":"positive regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000999"}


id: FYPO:0007687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type) during meiosis. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle.","definition_xrefs":["PMID:33574613","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during meiosis","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during meiosis","type":"exact"},{"name":"normal protein localization to Mmi1 focus during meiosis","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during meiosis","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during meiosis","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007687"}


id: GO:0140696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol.","definition_xrefs":["PMID:30498244","RHEA:58664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["EC:1.1.5.13"],"synonyms":[{"name":"L-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0140696"}


id: PBO:0088903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get1","termid":"PBO:0088903"}


id: FYPO:0001257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to oxygen","synonyms":[{"name":"normal protein accumulation during cellular response to oxygen","type":"related"},{"name":"normal protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001257"}


id: GO:0043162
data:
  {"annotated_genes":["SJAG_04151","SJAG_04349","SJAG_01281","SJAG_03250","SJAG_01981","SJAG_02117","SJAG_01242","SJAG_03892","SJAG_03756","SJAG_02584","SJAG_01586","SJAG_05303","SJAG_00416","SJAG_00821","SJAG_01528","SJAG_03783","SJAG_00900","SJAG_04024","SJAG_04936","SJAG_04489","SJAG_04912","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92642,99231,108884],"is_not":false,"summary":null,"term":"GO:0043162"},{"annotations":[88104,107530,96972,84281,94060,105864,86679,87739,87606,105448,101036,102630,112454,84111,92072,88389,103439,106711,110773],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the multivesicular body (MVB) sorting pathway; ubiquitin-tagged proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.","definition_xrefs":["PMID:11511343","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01528":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04151":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the multivesicular body pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the multivesicular body pathway","type":"exact"}],"termid":"GO:0043162","terms_by_termid":{"GO:0043162":null,"GO:0043328":null}}


id: PBO:0039414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angelman syndrome chromosome region","termid":"PBO:0039414"}


id: PBO:0084422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); required for isomaltose utilization; preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; member of the IMA isomaltase family","termid":"PBO:0084422"}


id: PBO:0064747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 83","termid":"PBO:0064747"}


id: PBO:0048594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GH3 domain containing","termid":"PBO:0048594"}


id: PBO:0079450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor 2, mitochondrial calcium regulator","termid":"PBO:0079450"}


id: PBO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology","termid":"PBO:0031421"}


id: GO:2000742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior head development","termid":"GO:2000742"}


id: PBO:0054250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1633","termid":"PBO:0054250"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: PR:B5BP49
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC460.05 gene.","definition_xrefs":["UniProtKB:B5BP49","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C460.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.05","synonyms":[{"name":"Spom972h-SPBC460.05","type":"exact"}],"termid":"PR:B5BP49"}


id: GO:1990225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Narrow, electron-dense part of the rhoptry that extends through the conoid at the apical tip of an apicomplexan parasite. The rhoptry neck serves as a duct through which the contents of the rhoptry are secreted after attachment to the host has been completed and at the commencement of invasion.","definition_xrefs":["PMID:23499754","PMID:24002067","GOC:pr","PMID:23937520","PMID:24070999","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry neck","termid":"GO:1990225"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: GO:1903517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single strand break repair.","definition_xrefs":["PMID:17395247","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"negatively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of single strand break repair","synonyms":[{"name":"down regulation of single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair","type":"narrow"}],"termid":"GO:1903517"}


id: PBO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papillomavirus (type 18) integration site 1","termid":"PBO:0050552"}


id: PBO:0075123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 173","termid":"PBO:0075123"}


id: GO:0003315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"heart rudiment morphogenesis","termid":"GO:0003314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart rudiment formation","synonyms":[{"name":"heart cone formation","type":"exact"}],"termid":"GO:0003315"}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: PBO:0077710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin T3, fast skeletal type","termid":"PBO:0077710"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_00938","SJAG_04960","SJAG_00284","SJAG_03938","SJAG_01925","SJAG_03268","SJAG_04391","SJAG_02166","SJAG_03357","SJAG_02320","SJAG_03011","SJAG_04044","SJAG_03864","SJAG_03005"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113778,89319],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91622],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[86871,98002,110224,95633,109942,84775,113763,114862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[104209,112252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: FYPO:0004925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the ascospore wall is rougher and less regular than normal.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0005447","FYPO:0000631","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"irregular ascospore wall","synonyms":[{"name":"irregular ascospore wall surface texture","type":"exact"},{"name":"irregular spore wall","type":"exact"},{"name":"rough ascospore wall","type":"exact"}],"termid":"FYPO:0004925"}


id: GO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending thin limb development","termid":"GO:0072022"}


id: PBO:0043495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 4","termid":"PBO:0043495"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: PBO:0039097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 1","termid":"PBO:0039097"}


id: GO:0009353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix.","definition_xrefs":["GOC:mtg_sensu","MetaCyc:CPLX66-42","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxoglutarate dehydrogenase complex (obsolete GO:0009353)","termid":"GO:0009353"}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: GO:0018675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + O2 + reduced [NADPH--hemoprotein reductase] = (1S,5R)-carveol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:17945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"},{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-limonene 6-monooxygenase activity","secondary_identifiers":["MetaCyc:--LIMONENE-6-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0713","EC:1.14.14.51"],"synonyms":[{"name":"(-)-limonene 6-hydroxylase activity","type":"related"},{"name":"(-)-limonene 6-monooxygenase activity","type":"exact"},{"name":"(-)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating) activity","type":"related"},{"name":"(S)-limonene,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"limonene 6-hydroxylase activity","type":"exact"}],"termid":"GO:0018675"}


id: PBO:0085216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase for Vac8p; required for vacuolar membrane fusion; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; autoacylates; required for vacuolar integrity under stress conditions","termid":"PBO:0085216"}


id: GO:0048277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initial attachment of a transport vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during a non-exocytotic process.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nonexocytotic vesicle docking (obsolete GO:0048277)","synonyms":[{"name":"non-exocytotic vesicle docking","type":"exact"},{"name":"nonexocytotic vesicle docking","type":"exact"}],"termid":"GO:0048277"}


id: PATO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Violet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"violet","termid":"PATO:0001424"}


id: PBO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine deaminase Ccd1 (predicted)","termid":"PBO:0002223"}


id: GO:0031781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 melanocortin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor binding","termid":"GO:0031779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 3 melanocortin receptor binding","synonyms":[{"name":"type 3 melanocortin receptor ligand","type":"narrow"}],"termid":"GO:0031781"}


id: GO:0140446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigermin, an alpha-pyrone secondary metabolite found in some species of fungi such as Aspergillus fumigatus.","definition_xrefs":["PMID:32083553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fumigermin biosynthetic process","synonyms":[{"name":"fumigermin anabolism","type":"exact"},{"name":"fumigermin biosynthesis","type":"exact"},{"name":"fumigermin formation","type":"exact"},{"name":"fumigermin synthesis","type":"exact"}],"termid":"GO:0140446"}


id: PBO:0059333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 2","termid":"PBO:0059333"}


id: GO:1904905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"negatively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"down regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"down-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"downregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"inhibition of endothelial cell-matrix adhesion via fibronectin","type":"narrow"}],"termid":"GO:1904905"}


id: PBO:0079703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBOX5 antisense RNA 1","termid":"PBO:0079703"}


id: PBO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 2","termid":"PBO:0060903"}


id: PBO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 15","termid":"PBO:0070480"}


id: GO:0044343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate or frequency of pancreatic B cell proliferation. Pancreatic B cell are cells of the pancreas that secrete insulin.","definition_xrefs":["GOC:yaf","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of type B pancreatic cell proliferation (obsolete GO:0044343)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in pancreatic beta cell proliferation","type":"related"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of pancreatic B cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of type B pancreatic cell proliferation","type":"exact"}],"termid":"GO:0044343"}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_04785","SJAG_01868","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83629,87921,93735],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: PBO:0046923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member A, Y-linked 2","termid":"PBO:0046923"}


id: FYPO:0005803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the lateral part of the cell occurs more slowly than normal.","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell side","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell side during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell side during vegetative growth","type":"exact"},{"name":"decreased rate of protein movement within plasma membrane at lateral part of cell","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell side","type":"exact"},{"name":"slow protein movement within plasma membrane at cell side","type":"exact"}],"termid":"FYPO:0005803"}


id: PBO:0006184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localizes","termid":"PBO:0006184"}


id: GO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiogenesis","termid":"GO:0045765"}


id: PR:Q9P5N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-type specific agglutination protein C359.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.04c","synonyms":[{"name":"Spom972h-pfl7","type":"exact"}],"termid":"PR:Q9P5N1"}


id: GO:0015091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric iron (Fe(III) or Fe3+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}


id: PBO:0012836
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens KRAS","termid":"PBO:0012836"}


id: PBO:0084024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyoxylate reductase; acts on glyoxylate and hydroxypyruvate substrates; YPL113C is not an essential gene","termid":"PBO:0084024"}


id: PBO:0055237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2664","termid":"PBO:0055237"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: PBO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kappa","termid":"PBO:0044009"}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: GO:0010978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcriptional or post-transcriptional process, arising in non-dividing cells as they age, carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:dph","GOC:jp","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing involved in chronological cell aging (obsolete GO:0010978)","termid":"GO:0010978"}


id: PBO:0050200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 17","termid":"PBO:0050200"}


id: GO:1990431
data:
  {"annotated_genes":["SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103853,114117],"is_not":false,"summary":null,"term":"GO:1990431"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a priRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"priRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"priRNA 3' end processing","type":"exact"},{"name":"primal small RNA 3'-end processing","type":"exact"}],"termid":"GO:1990431","terms_by_termid":{"GO:1990431":null}}


id: GO:0038056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway by stopping, preventing or reducing the frequency, rate or extent of secretion of a member of the BMP family of proteins from the signaling cell.","definition_xrefs":["PMID:21750037","GOC:bf","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway by negative regulation of BMP secretion (obsolete GO:0038056)","synonyms":[{"name":"negative regulation of BMP signaling pathway by negative regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"negative regulation of BMP signalling pathway by negative regulation of BMP secretion","type":"exact"}],"termid":"GO:0038056"}


id: PBO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation_during_vegetative_growth","termid":"PBO:0035730"}


id: GO:1901675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 acetylation (obsolete GO:1901675)","synonyms":[{"name":"down regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down regulation of histone H3K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3K27 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K27","type":"exact"},{"name":"downregulation of histone H3-K27 acetylation","type":"exact"},{"name":"downregulation of histone H3K27 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K27","type":"exact"},{"name":"inhibition of histone H3-K27 acetylation","type":"narrow"},{"name":"inhibition of histone H3K27 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K27","type":"exact"},{"name":"negative regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901675"}


id: GO:0090117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of low-density lipoprotein particle from endosomes to lysosomes.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endosome to lysosome transport of low-density lipoprotein particle","synonyms":[{"name":"endosome to lysosome transport of LDL","type":"exact"}],"termid":"GO:0090117"}


id: MOD:01177
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine.","definition_xrefs":["PubMed:16760471","RESID:AA0431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(1,2,3-trihydroxypropan-2-yl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(1,2,3-trihydroxyprop-2-yl)-L-histidine","type":"exact"},{"name":"1-[1,2-dihydroxy-1-(hydroxymethyl)ethyl]-L-histidine","type":"exact"},{"name":"MOD_RES Tele-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"},{"name":"N(epsilon)-histidine dihydroxyacetone adduct","type":"exact"},{"name":"N(tau)-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"},{"name":"NtauDHAHis","type":"exact"},{"name":"tele-(1,2,3-trihydroxypropan-2-yl)histidine","type":"exact"}],"termid":"MOD:01177"}


id: PBO:0072348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 34","termid":"PBO:0072348"}


id: GO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of muscle contraction is reduced. Muscle relaxation can involve a number of processes including the removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases. In some muscles, calcium-independent pathways also play a role in muscle relaxation by decreasing the phosphorylation state of myosin light chain.","definition_xrefs":["PMID:19996365","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of muscle","termid":"GO:0090075"}


id: PBO:0027396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027396"}


id: GO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to N-acetylgalactosamine, 2-acetamido-2-deoxygalactopyranose, the n-acetyl derivative of galactosamine.","definition_xrefs":["PMID:18384150","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"N-acetylgalactosamine binding","synonyms":[{"name":"N-acetylgalactosamine lectin","type":"related"}],"termid":"GO:0046871"}


id: PBO:0043142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 10","termid":"PBO:0043142"}


id: PBO:0027047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2_DNA_damage_checkpoint","termid":"PBO:0027047"}


id: PBO:0091491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa2","termid":"PBO:0091491"}


id: PR:P40381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi6 gene.","definition_xrefs":["UniProtKB:P40381","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-associated protein swi6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.01c","synonyms":[{"name":"Spom972h-swi6","type":"exact"}],"termid":"PR:P40381"}


id: SO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified tyrosine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_tyrosine","secondary_identifiers":["MOD:00919"],"synonyms":[{"name":"ModTry","type":"exact"},{"name":"modified L tyrosine","type":"exact"},{"name":"modified L-tyrosine","type":"exact"}],"termid":"SO:0001405"}


id: GO:0033527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including glycine and succinyl-CoA.","definition_xrefs":["MetaCyc:PWY-5189","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0033013","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:0033527"}


id: GO:1901190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of formation of translation initiation ternary complex","synonyms":[{"name":"regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901190"}


id: GO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endothelial cell proliferation","synonyms":[{"name":"down regulation of endothelial cell proliferation","type":"exact"},{"name":"down-regulation of endothelial cell proliferation","type":"exact"},{"name":"downregulation of endothelial cell proliferation","type":"exact"},{"name":"inhibition of endothelial cell proliferation","type":"narrow"}],"termid":"GO:0001937"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: PBO:0058164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4458","termid":"PBO:0058164"}


id: PBO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft1 (predicted)","termid":"PBO:0013443"}


id: PBO:0074724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80D","termid":"PBO:0074724"}


id: PBO:0078765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA mitochondrial 2-thiouridylase","termid":"PBO:0078765"}


id: PBO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_extent_and_duration_of_protein-protein_interaction","termid":"PBO:0035737"}


id: GO:1990926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which synaptic transmission, induced by the arrival of a spike (action potential) at a synapse, acts to increase the amount of neurotransmitter released in response to the arrival of subsequent spikes. This effect is seen when a train of closely space spikes arrives at a synapse with a low initial release probability. It occurs in a timeframe of tens to hundreds of milliseconds.","definition_xrefs":["GOC:dos","PMID:26738595","ISBN:9780071120005","PMID:11826273","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"short-term synaptic potentiation","synonyms":[{"name":"synaptic facilitation","type":"exact"}],"termid":"GO:1990926"}


id: PBO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 11","termid":"PBO:0047747"}


id: PBO:0074311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 3","termid":"PBO:0074311"}


id: GO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of kappa-opioid receptors, including high affinity for dynorphins.","definition_xrefs":["IUPHAR_RECEPTOR:318"],"gene_count":0,"genotype_count":0,"name":"obsolete kappa-opioid receptor activity (obsolete GO:0004987)","secondary_identifiers":["Wikipedia:Kappa_Opioid_receptor"],"synonyms":[{"name":"kappa-opioid receptor activity","type":"exact"}],"termid":"GO:0004987"}


id: PBO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamine_import","termid":"PBO:0031164"}


id: PBO:0063411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 7","termid":"PBO:0063411"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["RESID:AA0224","PubMed:7506257","PubMed:11058759","PubMed:11877257","PubMed:7535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: GO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interaction between host proteins.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:17297443"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein-protein interaction (obsolete GO:0036472)","synonyms":[{"name":"suppression by virus of host protein binding","type":"exact"},{"name":"suppression by virus of host protein interaction","type":"exact"},{"name":"suppression by virus of host protein:protein binding","type":"exact"},{"name":"suppression by virus of host protein:protein interaction","type":"exact"}],"termid":"GO:0036472"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: PBO:0079027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 10-1","termid":"PBO:0079027"}


id: MOD:02073
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-selenocysteine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-selenocysteine residue","termid":"MOD:02073"}


id: PBO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 25 pseudogene","termid":"PBO:0070111"}


id: GO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045811"],"synonyms":[{"name":"activation of Wnt receptor signaling pathway","type":"narrow"},{"name":"activation of frizzled signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signalling pathway","type":"exact"},{"name":"stimulation of Wnt receptor signaling pathway","type":"narrow"},{"name":"stimulation of frizzled signaling pathway","type":"narrow"},{"name":"up regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up regulation of frizzled signaling pathway","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up-regulation of frizzled signaling pathway","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"upregulation of frizzled signaling pathway","type":"exact"}],"termid":"GO:0030177"}


id: GO:0043915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-tRNA(Sec) = ADP + O-phospho-L-seryl-tRNA(Sec).","definition_xrefs":["PMID:16201757","RHEA:25037","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0016301","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"L-seryl-tRNA(Sec) kinase activity","secondary_identifiers":["MetaCyc:RXN-10038","EC:2.7.1.164"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Sec) kinase activity","type":"exact"}],"termid":"GO:0043915"}


id: PBO:0078165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta locus","termid":"PBO:0078165"}


id: PBO:0075914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 6","termid":"PBO:0075914"}


id: FYPO:0001522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on caffeine","synonyms":[{"name":"normal cell population growth in presence of caffeine","type":"exact"},{"name":"normal cell population growth on caffeine","type":"exact"},{"name":"normal cellular response to caffeine","type":"related"},{"name":"normal vegetative cell population growth on caffeine","type":"exact"}],"termid":"FYPO:0001522"}


id: PBO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G1_phase_progression","termid":"PBO:0031650"}


id: PBO:0026801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026801"}


id: FYPO:0008068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin silencing at silent mating-type cassette","termid":"FYPO:0004376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased spatial extent of chromatin silencing at silent mating-type cassette","termid":"FYPO:0008068"}


id: PBO:0084386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity methionine permease; similar to Mup1p","termid":"PBO:0084386"}


id: PBO:0027871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylated_histone_binding","termid":"PBO:0027871"}


id: PBO:0078109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1","termid":"PBO:0078109"}


id: PBO:0030833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_N-methyl-N'-nitro-N-nitrosoguanidine","termid":"PBO:0030833"}


id: FYPO:0003480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains no queuosine residues.","definition_xrefs":["PomBase:mah","PMID:24911101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased queuosine level in tRNA","termid":"FYPO:0003427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003427"}],"interesting_parent_ids":["FYPO:0003427","FYPO:0001985"],"is_obsolete":false,"name":"queuosine absent from tRNA","termid":"FYPO:0003480"}


id: FYPO:0002632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which dTTP biosynthesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal dTTP biosynthetic process","termid":"FYPO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased dTTP biosynthetic process","synonyms":[{"name":"decreased dTTP biosynthesis","type":"exact"},{"name":"decreased dTTP biosynthetic process during mitotic cell cycle","type":"related"},{"name":"decreased dTTP biosynthetic process during vegetative growth","type":"exact"},{"name":"reduced dTTP biosynthetic process","type":"exact"}],"termid":"FYPO:0002632"}


id: PBO:0074792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12","termid":"PBO:0074792"}


id: GO:0044545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residues at several positions. In human, it contains the catalytic subunit MOF, NSL1/KIAA1267, NSL2/KANSL2, NSL3/KANSL3, MCRS1, PHF20, OGT1, WDR5 and HCF1.","definition_xrefs":["GOC:lb","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"NSL complex","synonyms":[{"name":"non-specific lethal complex","type":"exact"}],"termid":"GO:0044545"}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: PBO:0049187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 3","termid":"PBO:0049187"}


id: PBO:0078145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 24","termid":"PBO:0078145"}


id: GO:1990386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Advancement of the mitotic cleavage furrow from the outside of the cell inward towards the center of the cell. The cleavage furrow acts as a 'purse string' which draws tight to separate daughter cells during mitotic cytokinesis and partition the cytoplasm between the two daughter cells. The furrow ingresses until a cytoplasmic bridge is formed.","definition_xrefs":["PMID:12707312","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleavage furrow ingression","termid":"GO:0036090"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"mitotic cleavage furrow ingression","termid":"GO:1990386"}


id: GO:0102547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2-O-(alpha-D-glucopyranosyl)-D-glycerate = alpha-D-glucose + D-glycerate.","definition_xrefs":["GOC:pz","EC:3.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glucosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14901","RHEA:32059"],"termid":"GO:0102547"}


id: FYPO:0007083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"meiotic spindle collapse","synonyms":[{"name":"broken meiotic spindle","type":"related"},{"name":"meiotic spindle breakage","type":"exact"},{"name":"spindle collapse during meiosis","type":"exact"},{"name":"spindle collapse during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007083"}


id: PBO:0058778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7112","termid":"PBO:0058778"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["UniProtKB:Q92358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: GO:0019887
data:
  {"annotated_genes":["SJAG_01605","SJAG_00439","SJAG_02026","SJAG_04502","SJAG_00318","SJAG_04614","SJAG_03936","SJAG_05978","SJAG_04509","SJAG_00142","SJAG_03453","SJAG_03695","SJAG_01210","SJAG_02605","SJAG_00457","SJAG_00613","SJAG_01020","SJAG_03591","SJAG_03802","SJAG_04140","SJAG_00236","SJAG_01000","SJAG_03525","SJAG_01411","SJAG_01213","SJAG_01821","SJAG_02785","SJAG_02404","SJAG_05017","SJAG_05030","SJAG_00333","SJAG_00973","SJAG_03618","SJAG_03090","SJAG_02332","SJAG_02057","SJAG_04200","SJAG_03931","SJAG_03371","SJAG_01118","SJAG_01274","SJAG_00100","SJAG_01401","SJAG_02232","SJAG_03340","SJAG_03699","SJAG_01245","SJAG_04020","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93852,93978,112212,114409],"is_not":false,"summary":null,"term":"GO:0019887"},{"annotations":[96524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[88243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[107270,104947,108153,97706,106986,109039,101076,113126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[104965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[102323,100411,102418,102034,98943,104429,87846,84372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[108552,87414,112386,113322,114929,105906,85353,105907,107500,114930,95279,95173,95174,106597,103209,114813,83992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[103081,111382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[87296,101186,105340,106618,86977,113323,87297,109040,114395,84060,96064,85368,87251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[104477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01000":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"protein kinase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019887","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0019912":null,"GO:0030291":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: GO:0010600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["PMID:18287041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"regulates","term_name":"auxin biosynthetic process","termid":"GO:0009851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of auxin biosynthetic process","termid":"GO:0010600"}


id: PBO:0063316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated CTD interacting factor 1","termid":"PBO:0063316"}


id: PBO:0078753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: GO:0008777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-acetyl-L-ornithine + H2O = acetate + L-ornithine.","definition_xrefs":["EC:3.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0019213","GO:0003824"],"is_obsolete":false,"name":"acetylornithine deacetylase activity","secondary_identifiers":["RHEA:15941","MetaCyc:ACETYLORNDEACET-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"N-acetylornithinase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine amidohydrolase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"}],"termid":"GO:0008777"}


id: PBO:0075534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E14","termid":"PBO:0075534"}


id: PBO:0029072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0029072"}


id: PBO:0050257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 35","termid":"PBO:0050257"}


id: PBO:0074130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 2","termid":"PBO:0074130"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0029042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029042"}


id: GO:0038002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of information from one cell to another, where an endocrine hormone is transported from the signal-producing cell to the receiving cell via the circulatory system (via blood, lymph or cerebrospinal fluid). The signaling cell and the receiving cell are often distant to each other.","definition_xrefs":["GOC:mtg_signaling_feb11","ISBN:0199264678","ISBN:3527303782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"endocrine process","termid":"GO:0050886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocrine signaling","synonyms":[{"name":"endocrine signalling","type":"exact"}],"termid":"GO:0038002"}


id: PBO:0040539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GALT5 antisense RNA 1","termid":"PBO:0040539"}


id: PBO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate N-acetyltransferase (predicted)","termid":"PBO:0003141"}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13120:SF0","OMA:SCHPO01040","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: PBO:0075992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1B","termid":"PBO:0075992"}


id: PBO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_membrane_during_vegetative_growth","termid":"PBO:0035781"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: GO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1,4-alpha-D-glucosyl(n) = D-fructose + 1,4-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.4","MetaCyc:AMYLOSUCRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"amylosucrase activity","secondary_identifiers":["RHEA:24572"],"synonyms":[{"name":"sucrose-1,4-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047669"}


id: PBO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein","termid":"PBO:0001232"}


id: PBO:0041705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2","termid":"PBO:0041705"}


id: GO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aplanospore formation","termid":"GO:0075289"}


id: PBO:0075986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 antisense RNA 1","termid":"PBO:0075986"}


id: SO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_methylcytidine","secondary_identifiers":["RNAMOD:082"],"synonyms":[{"name":"N4 methylcytidine","type":"exact"},{"name":"N4-methylcytidine","type":"exact"},{"name":"m4C","type":"exact"}],"termid":"SO:0001290"}


id: PATO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance to a stimulus which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"resistant to","termid":"PATO:0001178"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased resistance to","synonyms":[{"name":"high resistance to","type":"exact"},{"name":"increased resistance","type":"exact"}],"termid":"PATO:0001650"}


id: GO:0002766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately leading to inhibition of an innate immune response.","definition_xrefs":["PMID:15771571","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting signal transduction","termid":"GO:0002765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"innate immune response-inhibiting signal transduction","termid":"GO:0002766"}


id: MOD:00581
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one (18)O atom for one (16)O atom.","definition_xrefs":["PubMed:11467524","Unimod:258","OMSSA:87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O substituted residue","termid":"MOD:00845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted residue","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"},{"name":"ctermpepo18","type":"exact"}],"termid":"MOD:00581"}


id: FYPO:0004955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylinositol-3-phosphate binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3-phosphate binding","synonyms":[{"name":"decreased PtdIns-3-P binding","type":"exact"},{"name":"decreased phosphatidylinositol 3-phosphate binding","type":"exact"},{"name":"reduced phosphatidylinositol-3-phosphate binding","type":"exact"}],"termid":"FYPO:0004955"}


id: PBO:0090903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. pombe SPBC16G5.19 predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. j 4008650-4008727) in the SPBC16G5.19 reading frame, unable to get a CDS.","termid":"PBO:0090903"}


id: PBO:0070339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 11","termid":"PBO:0070339"}


id: GO:0098961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribonucleoprotein complex along microtubules in nerve cell dendrites.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dendritic transport of ribonucleoprotein complex","synonyms":[{"name":"dendritic transport of RNP complex","type":"exact"}],"termid":"GO:0098961"}


id: PR:Q10193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srp1 gene.","definition_xrefs":["UniProtKB:Q10193","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor srp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.08","synonyms":[{"name":"Spom972h-srp1","type":"exact"}],"termid":"PR:Q10193"}


id: PBO:0090154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1","termid":"PBO:0090154"}


id: GO:0032546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleoside binding","termid":"GO:0032546"}


id: PBO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminase","termid":"PBO:0048721"}


id: PBO:0066892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 192","termid":"PBO:0066892"}


id: PR:Q9Y7T2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 89 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C63.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.06","secondary_identifiers":["UniProtKB:Q9Y7T2"],"synonyms":[{"name":"Spom972h-WDR89","type":"exact"}],"termid":"PR:Q9Y7T2"}


id: PBO:0075948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 3 (pseudogene)","termid":"PBO:0075948"}


id: GO:0071206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to the juxtaparanode region of an axon.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"},{"relation_name":"is_a","term_name":"protein localization to juxtaparanode region of axon","termid":"GO:0071205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to juxtaparanode region of axon","synonyms":[{"name":"establishment of protein localisation to juxtaparanode region of axon","type":"exact"}],"termid":"GO:0071206"}


id: GO:1904419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop formation.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GOC:nc","PMID:22579284","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop formation","termid":"GO:1904418"},{"relation_name":"negatively_regulates","term_name":"telomeric loop formation","termid":"GO:0031627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop formation","synonyms":[{"name":"down regulation of t-loop biosynthesis","type":"exact"},{"name":"down regulation of t-loop formation","type":"exact"},{"name":"down regulation of telomeric loop formation","type":"exact"},{"name":"down-regulation of t-loop biosynthesis","type":"exact"},{"name":"down-regulation of t-loop formation","type":"exact"},{"name":"down-regulation of telomeric loop formation","type":"exact"},{"name":"downregulation of t-loop biosynthesis","type":"exact"},{"name":"downregulation of t-loop formation","type":"exact"},{"name":"downregulation of telomeric loop formation","type":"exact"},{"name":"inhibition of t-loop biosynthesis","type":"narrow"},{"name":"inhibition of t-loop formation","type":"narrow"},{"name":"inhibition of telomeric loop formation","type":"narrow"},{"name":"negative regulation of t-loop biosynthesis","type":"exact"},{"name":"negative regulation of t-loop formation","type":"exact"}],"termid":"GO:1904419"}


id: GO:2000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch metabolic process","synonyms":[{"name":"regulation of starch metabolism","type":"exact"}],"termid":"GO:2000904"}


id: FYPO:0008006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton phenotype observed during mitotic interphase in which the microtubule minus ends are dynamic (they alternate between growth and shrinkage phases).","definition_xrefs":["PMID:21444751","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"dynamic microtubule minus ends in interphase bundles","synonyms":[{"name":"dynamic microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends in interphase bundles","type":"broad"}],"termid":"FYPO:0008006"}


id: PBO:0031578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_organization","termid":"PBO:0031578"}


id: GO:0032631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-27 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-27 production","secondary_identifiers":["GO:0072625","GO:0045527"],"synonyms":[{"name":"IL-27 production","type":"exact"},{"name":"interleukin-27 biosynthetic process","type":"narrow"},{"name":"interleukin-27 formation","type":"narrow"},{"name":"interleukin-27 secretion","type":"narrow"},{"name":"interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032631"}


id: PBO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by missassembly of the cosmid","termid":"PBO:0002567"}


id: GO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell activation","termid":"GO:0036037"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta T cell development","type":"related"},{"name":"CD8-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043374"}


id: GO:0019596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"mandelate catabolic process","synonyms":[{"name":"mandelate breakdown","type":"exact"},{"name":"mandelate catabolism","type":"exact"},{"name":"mandelate degradation","type":"exact"}],"termid":"GO:0019596"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: GO:0005586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(III) chains; type III collagen triple helices associate to form fibrils.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrillar collagen trimer","termid":"GO:0005583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type III trimer","termid":"GO:0005586"}


id: GO:0031057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone modification (obsolete GO:0031057)","synonyms":[{"name":"down regulation of histone modification","type":"exact"},{"name":"down-regulation of histone modification","type":"exact"},{"name":"downregulation of histone modification","type":"exact"},{"name":"inhibition of histone modification","type":"narrow"}],"termid":"GO:0031057"}


id: GO:0016473
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting F-type ATPase complex","synonyms":[{"name":"sodium-translocating F-type ATPase complex","type":"exact"}],"termid":"GO:0016473"}


id: PBO:0045867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2","termid":"PBO:0045867"}


id: GO:0070291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acylethanolamines. An N-acylethanolamine is an ethanolamine substituted at nitrogen by an acyl group.","definition_xrefs":["PMID:14634025","CHEBI:52640","PMID:15878693","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N-acylethanolamine metabolic process","synonyms":[{"name":"N-acylethanolamine metabolism","type":"exact"},{"name":"NAE metabolic process","type":"exact"},{"name":"NAE metabolism","type":"exact"}],"termid":"GO:0070291"}


id: SO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region related to restriction enzyme function.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_region","synonyms":[{"name":"restriction enzyme region","type":"related"}],"termid":"SO:0001954"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: PBO:0063330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 6","termid":"PBO:0063330"}


id: PBO:0049634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 37","termid":"PBO:0049634"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: PBO:0067058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 79, pseudogene","termid":"PBO:0067058"}


id: GO:0098956
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the dense core granule membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of dense core granule membrane (obsolete GO:0098956)","synonyms":[{"name":"intrinsic to dense core granule membrane","type":"exact"}],"termid":"GO:0098956"}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115585,115583,115584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: PBO:0040689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 1","termid":"PBO:0040689"}


id: GO:0007084
data:
  {"annotated_genes":["SJAG_01242","SJAG_03783","SJAG_01745","SJAG_03892","SJAG_00900","SJAG_04489","SJAG_00416","SJAG_03891","SJAG_05207","SJAG_01050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84110,87448,92071,94059,96971,99230,99815,102629,115187,115188,115189,115190],"is_not":false,"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process involving ESCRTIII that results in reformation of the nuclear envelope after mitotic nuclear division. In organisms undergoing closed mitosis this involves resealing or 'repair' of the nuclear envelope in the nuclear bridge.","definition_xrefs":["PMID:32109380","PMID:28242692","PMID:26040712","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane reassembly","termid":"GO:0031468"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null,"PMID:32243490":null},"synonyms":[{"name":"mitotic nuclear envelope reassembly","type":"related"},{"name":"nuclear envelope repair","type":"broad"},{"name":"nuclear envelope resealing","type":"broad"}],"termid":"GO:0007084","terms_by_termid":{"GO:0007084":null}}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["PMID:21239624","PMID:19363786","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: PBO:0046239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 33","termid":"PBO:0046239"}


id: PBO:0064089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein membrane associated 1","termid":"PBO:0064089"}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: PR:O94296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.12 gene.","definition_xrefs":["UniProtKB:O94296","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C887.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.12","synonyms":[{"name":"Spom972h-SPBC887.12","type":"exact"}],"termid":"PR:O94296"}


id: PBO:0082398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p); involved in protein translocation into the endoplasmic reticulum; interacts with the exocyst complex and also with Rtn1p; cotranslationally N-acetylated by NatA; SBH1 has a paralog, SBH2, that arose from the whole genome duplication","termid":"PBO:0082398"}


id: GO:0003248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in heart capillaries that accompanies physiological hypertrophy of cardiac muscle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"heart growth","termid":"GO:0060419"},{"relation_name":"part_of","term_name":"coronary vasculature development","termid":"GO:0060976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart capillary growth","termid":"GO:0003248"}


id: GO:0018856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-phenylpropionate + CoA + ATP = AMP + diphosphate + benzoyl acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"benzoyl acetate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R05452","SABIO-RK:5058"],"termid":"GO:0018856"}


id: PBO:0049615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 18","termid":"PBO:0049615"}


id: GO:1905780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:17401362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"regulation of externalization of phosphatidylserine","type":"exact"}],"termid":"GO:1905780"}


id: PBO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (predicted)","termid":"PBO:0005482"}


id: PBO:0039795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 2","termid":"PBO:0039795"}


id: PBO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 5","termid":"PBO:0075253"}


id: GO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the trailing edge. The trailing edge is the area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to trailing edge","synonyms":[{"name":"protein localisation to trailing edge","type":"exact"}],"termid":"GO:0036051"}


id: GO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of platelet aggregation in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of platelet aggregation in another organism","termid":"GO:0044365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of platelet aggregation in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0044477"}


id: GO:0030114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A slime layer is an easily removed, diffuse, unorganized layer of extracellular material that surrounds a cell. Specifically this consists mostly of exopolysaccharides, glycoproteins, and glycolipids.","definition_xrefs":["GOC:mlg","Wikipedia:Slime_layer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"slime layer","termid":"GO:0030114"}


id: FYPO:0004732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer astral microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"astral microtubules present in decreased numbers","synonyms":[{"name":"astral microtubules present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"astral microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"astral microtubules present in reduced numbers","type":"exact"},{"name":"decreased level of astral microtubules","type":"exact"},{"name":"reduced number of astral microtubules","type":"exact"}],"termid":"FYPO:0004732"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["RHEA:12725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.15"],"termid":"GO:0047824"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: PBO:0053854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1123","termid":"PBO:0053854"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: PBO:0041430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 82","termid":"PBO:0041430"}


id: GO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg chorion. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of egg chorion","synonyms":[{"name":"structural constituent of chorion","type":"broad"},{"name":"structural protein of chorion","type":"narrow"}],"termid":"GO:0005213"}


id: PBO:0074586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3B","termid":"PBO:0074586"}


id: PBO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid1","termid":"PBO:0005391"}


id: PBO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitophagy receptor Atg43","termid":"PBO:0090144"}


id: MOD:00519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2Pent1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)Pent(1)","type":"related"},{"name":"Hex1HexNAc2Pent1","type":"related"}],"termid":"MOD:00519"}


id: GO:0015401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: urea(out) + Na+(out) = urea(in) + Na+(in).","definition_xrefs":["TC:2.A.21.6.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"urea:sodium symporter activity","synonyms":[{"name":"urea active transmembrane transporter activity","type":"exact"}],"termid":"GO:0015401"}


id: GO:0030289
data:
  {"annotated_genes":["SJAG_00369","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102646,103472],"is_not":false,"summary":null,"term":"GO:0030289"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex formed by the catalytic subunit of protein phosphatase 4 plus one or more regulatory subunits.","definition_xrefs":["PMID:10026142","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase 4 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030289","terms_by_termid":{"GO:0030289":null}}


id: PBO:0066993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 296","termid":"PBO:0066993"}


id: SO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Bacterial Artificial Chromosome, a cloning vector that can be propagated as mini-chromosomes in a bacterial host.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC","synonyms":[{"name":"bacterial artificial chromosome","type":"exact"}],"termid":"SO:0000153"}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: PBO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 52","termid":"PBO:0048341"}


id: PBO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4 (predicted)","termid":"PBO:0000607"}


id: GO:1901561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to benomyl (obsolete GO:1901561)","termid":"GO:1901561"}


id: PBO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt1","termid":"PBO:0005745"}


id: PBO:0002775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transporter Vth1","termid":"PBO:0002775"}


id: GO:1903351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dopamine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11118945","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to catecholamine stimulus","termid":"GO:0071870"},{"relation_name":"is_a","term_name":"response to dopamine","termid":"GO:1903350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dopamine","termid":"GO:1903351"}


id: SO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_UTR","synonyms":[{"name":"internal UTR","type":"exact"}],"termid":"SO:0000241"}


id: GO:1900388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of vesicle-mediated transport.","definition_xrefs":["GOC:TermGenie","PMID:18622392","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900388)","synonyms":[{"name":"regulation of vesicle-mediated transport by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900388"}


id: PBO:0054298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1689","termid":"PBO:0054298"}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:0051495
data:
  {"annotated_genes":["SJAG_04776","SJAG_03936","SJAG_02332","SJAG_03631","SJAG_00082","SJAG_04312","SJAG_03581","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[86127,90514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[90515,109433,90683,83686,106594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[107499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"positively_regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02332":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04312":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cytoskeleton organization","type":"narrow"},{"name":"positive regulation of cytoskeleton organisation","type":"exact"},{"name":"positive regulation of cytoskeleton organization and biogenesis","type":"related"},{"name":"stimulation of cytoskeleton organization","type":"narrow"},{"name":"up regulation of cytoskeleton organization","type":"exact"},{"name":"up-regulation of cytoskeleton organization","type":"exact"},{"name":"upregulation of cytoskeleton organization","type":"exact"}],"termid":"GO:0051495","terms_by_termid":{"GO:0031117":null,"GO:0110161":null,"GO:1903473":null,"GO:1903501":null}}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: GO:2000730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase I transcription.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase I","termid":"GO:0006356"},{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase I transcription","termid":"GO:0006363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase I transcription","synonyms":[{"name":"regulation of RNA polymerase I transcription termination","type":"exact"},{"name":"regulation of transcription termination from Pol I promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2000730"}


id: PBO:0050972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 15","termid":"PBO:0050972"}


id: PBO:0074765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1C","termid":"PBO:0074765"}


id: PBO:0064435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1","termid":"PBO:0064435"}


id: PBO:0059707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 15","termid":"PBO:0059707"}


id: PBO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1 like","termid":"PBO:0060384"}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88505],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: GO:2000862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of estrogen secretion","termid":"GO:2000861"},{"relation_name":"negatively_regulates","term_name":"estrogen secretion","termid":"GO:0035937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of estrogen secretion","synonyms":[{"name":"negative regulation of oestrogen secretion","type":"related"}],"termid":"GO:2000862"}


id: GO:0090630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of GTPase activity","termid":"GO:0043547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of GTPase activity","secondary_identifiers":["GO:0032863","GO:0032864","GO:0032858","GO:0032859","GO:0032861","GO:0032857","GO:0032862","GO:0032860","GO:0032856"],"synonyms":[{"name":"ARF GTPase activation","type":"narrow"},{"name":"Cdc42 GTPase activation","type":"narrow"},{"name":"Rab GTPase activation","type":"narrow"},{"name":"Rac GTPase activation","type":"narrow"},{"name":"Ral GTPase activation","type":"narrow"},{"name":"Ran GTPase activation","type":"narrow"},{"name":"Rap GTPase activation","type":"narrow"},{"name":"Ras GTPase activation","type":"narrow"},{"name":"Rho GTPase activation","type":"narrow"},{"name":"activation of ARF GTPase activity","type":"narrow"},{"name":"activation of Cdc42 GTPase activity","type":"narrow"},{"name":"activation of Rab GTPase activity","type":"narrow"},{"name":"activation of Rac GTPase activity","type":"narrow"},{"name":"activation of Ral GTPase activity","type":"narrow"},{"name":"activation of Ran GTPase activity","type":"narrow"},{"name":"activation of Rap GTPase activity","type":"narrow"},{"name":"activation of Ras GTPase activity","type":"narrow"},{"name":"activation of Rho GTPase activity","type":"narrow"}],"termid":"GO:0090630"}


id: PBO:0063855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with PRKCA 1","termid":"PBO:0063855"}


id: PBO:0076116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 19","termid":"PBO:0076116"}


id: PBO:0046740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXO5 divergent transcript","termid":"PBO:0046740"}


id: PBO:0051100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-3","termid":"PBO:0051100"}


id: GO:0043476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment accumulation","synonyms":[{"name":"pigment accumulation in response to external stimulus","type":"exact"}],"termid":"GO:0043476"}


id: GO:2000166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in pericardium morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of planar cell polarity pathway involved in heart morphogenesis","termid":"GO:2000160"},{"relation_name":"negatively_regulates","term_name":"planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:0061354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of planar cell polarity pathway involved in pericardium morphogenesis","termid":"GO:2000166"}


id: GO:0031491
data:
  {"annotated_genes":["SJAG_01046","SJAG_02348","SJAG_01653","SJAG_03997","SJAG_02416","SJAG_02401","SJAG_00914","SJAG_01823","SJAG_01146","SJAG_03982","SJAG_03945","SJAG_05192","SJAG_03905","SJAG_04879","SJAG_03128","SJAG_00913","SJAG_00925","SJAG_03694","SJAG_04670"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88486,90190,92262,93195,98994,99318,99652,103951,104849,104854,106021,106299,107341,109371,109683,111468,113075,113172,113315],"is_not":false,"summary":null,"term":"GO:0031491"}]},"cv_name":"molecular_function","definition":"Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01046":null,"SJAG_01146":null,"SJAG_01653":null,"SJAG_01823":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_03128":null,"SJAG_03694":null,"SJAG_03905":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_05192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031491","terms_by_termid":{"GO:0031491":null}}


id: PR:O14169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pgc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phospholipase C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.02c","synonyms":[{"name":"Spom972h-pgc1","type":"exact"}],"termid":"PR:O14169"}


id: PBO:0003589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter (predicted)","termid":"PBO:0003589"}


id: PBO:0056321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K5 antisense RNA 1","termid":"PBO:0056321"}


id: GO:0032112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein histidine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of protein histidine kinase activity","termid":"GO:0032110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein histidine kinase activity","synonyms":[{"name":"down regulation of protein histidine kinase activity","type":"exact"},{"name":"down-regulation of protein histidine kinase activity","type":"exact"},{"name":"downregulation of protein histidine kinase activity","type":"exact"},{"name":"inhibition of protein histidine kinase activity","type":"narrow"},{"name":"protein histidine kinase inhibitor","type":"related"}],"termid":"GO:0032112"}


id: PBO:0042254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 2","termid":"PBO:0042254"}


id: GO:0046945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The carbamylation of the N-terminal alanine of proteins to form the derivative N-carbamoyl-L-alanine.","definition_xrefs":["RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"},{"relation_name":"is_a","term_name":"protein carbamoylation","termid":"GO:0046944"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid carbamoylation","termid":"GO:0050990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine N-carbamoylation","synonyms":[{"name":"N-terminal peptidyl-alanine N-carbamylation","type":"related"}],"termid":"GO:0046945"}


id: PR:Q9UTK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L11, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11661:SF1","PRO:DNx","OMA:SCHPO01339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L19, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.07c","secondary_identifiers":["UniProtKB:Q9UTK2"],"synonyms":[{"name":"Spom972h-MRPL11","type":"exact"}],"termid":"PR:Q9UTK2"}


id: GO:0008306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning by associating a stimulus (the cause) with a particular outcome (the effect).","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"associative learning","secondary_identifiers":["Wikipedia:Learning#Associative_learning"],"synonyms":[{"name":"Pavlovian conditioning","type":"exact"},{"name":"classical conditioning","type":"exact"},{"name":"conditional learning","type":"exact"},{"name":"conditional response","type":"exact"}],"termid":"GO:0008306"}


id: PBO:0058051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4272","termid":"PBO:0058051"}


id: FYPO:0009054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased viabilitiy in stationary phase upon glucose starvation","termid":"FYPO:0009054"}


id: GO:0043214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a bacteriocin from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["GOC:mlg","PMID:33040342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type xenobiotic transporter activity","termid":"GO:0008559"},{"relation_name":"is_a","term_name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type bacteriocin transporter activity","synonyms":[{"name":"ABC-type bacteriocin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled bacteriocin transmembrane transporter activity","type":"related"},{"name":"bacteriocin ABC transporter","type":"exact"}],"termid":"GO:0043214"}


id: PBO:0066250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMS3 antisense RNA 3","termid":"PBO:0066250"}


id: PBO:0077959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-3","termid":"PBO:0077959"}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91196],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: PBO:0056184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor K","termid":"PBO:0056184"}


id: GO:0047150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + glycine betaine = N,N-dimethylglycine + L-methionine.","definition_xrefs":["EC:2.1.1.5","RHEA:22336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"betaine-homocysteine S-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1614654","KEGG_REACTION:R02821","MetaCyc:2.1.1.5-RXN"],"synonyms":[{"name":"betaine-homocysteine methyltransferase activity","type":"related"},{"name":"betaine-homocysteine transmethylase activity","type":"related"},{"name":"trimethylammonioacetate:L-homocysteine S-methyltransferase activity","type":"related"}],"termid":"GO:0047150"}


id: GO:0098781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transcription of non (protein) coding RNA from a DNA template.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA transcription (obsolete GO:0098781)","termid":"GO:0098781"}


id: PBO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 family protein Alp14","termid":"PBO:0018160"}


id: GO:0140540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:15749104","PMID:18457993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of melanization defense response","termid":"GO:0035009"},{"relation_name":"is_a","term_name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"},{"relation_name":"negatively_regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation melanotic encapsulation of foreign target","termid":"GO:0140540"}


id: PBO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2422","termid":"PBO:0055007"}


id: GO:1900538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose homeostasis (obsolete GO:1900538)","synonyms":[{"name":"activation of glucose homeostasis","type":"narrow"},{"name":"positive regulation of glucose homeostasis","type":"exact"},{"name":"up regulation of glucose homeostasis","type":"exact"},{"name":"up-regulation of glucose homeostasis","type":"exact"},{"name":"upregulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900538"}


id: PR:P87172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12526:SF37","OMA:SCHPO02799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.07","secondary_identifiers":["UniProtKB:P87172"],"synonyms":[{"name":"GlcNAc-PI synthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGA","type":"exact"}],"termid":"PR:P87172"}


id: PBO:0075817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slingshot protein phosphatase 1","termid":"PBO:0075817"}


id: PBO:0085074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel subunit of the vacuolar transporter chaperone complex; vacuolar transmembrane protein that regulates biosynthesis of polyphosphate; deletion reduces and overexpression increases polyP accumulation; SPX domain (Syg1, Pho81, Xpr1)-containing protein involved in phosphate homeostasis; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085074"}


id: GO:0097731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).","definition_xrefs":["GOC:cilia","PMID:22118931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-motile cilium","termid":"GO:0097730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"9+0 non-motile cilium","synonyms":[{"name":"9+0 immotile cilium","type":"exact"},{"name":"non-motile 9+0 cilium","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0097731"}


id: GO:0052563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont immune response (obsolete GO:0052563)","synonyms":[{"name":"negative regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052563"}


id: PR:O74983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 variant 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme spm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.05c","secondary_identifiers":["UniProtKB:O74983"],"synonyms":[{"name":"Spom972h-UBE2V1","type":"exact"},{"name":"UEV MMS2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme variant MMS2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74983"}


id: GO:0043053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["GOC:kmv","PMID:10077613","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer entry","synonyms":[{"name":"nematode entry into dormancy","type":"exact"}],"termid":"GO:0043053"}


id: PBO:0076391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACR3 antisense RNA 1","termid":"PBO:0076391"}


id: PBO:0058420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4789","termid":"PBO:0058420"}


id: GO:1904050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spontaneous neurotransmitter secretion.","definition_xrefs":["PMID:22314364","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of spontaneous neurotransmitter secretion","termid":"GO:1904048"},{"relation_name":"positively_regulates","term_name":"spontaneous neurotransmitter secretion","termid":"GO:0061669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of spontaneous neurotransmitter secretion","synonyms":[{"name":"activation of spontaneous neurotransmitter secretion","type":"narrow"},{"name":"activation of stimulus-independent neurotransmitter secretion","type":"narrow"},{"name":"positive regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"up-regulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"up-regulation of stimulus-independent neurotransmitter secretion","type":"exact"},{"name":"upregulation of spontaneous neurotransmitter secretion","type":"exact"},{"name":"upregulation of stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:1904050"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","PMID:22393241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: PBO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 2","termid":"PBO:0043972"}


id: GO:0100029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates histone modification.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by transcription from RNA polymerase II promoter (obsolete GO:0100029)","termid":"GO:0100029"}


id: PBO:0052479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 7A","termid":"PBO:0052479"}


id: PBO:0029407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0029407"}


id: PBO:0076435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 11","termid":"PBO:0076435"}


id: FYPO:0007630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007630"}


id: GO:0102816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-glucosyl-5-O-caffeoylglucoside = H+ + delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"UDP-D-glucose:delphinidin 3-O-glucosyl-5-O-caffeoylglucoside -O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8234","RHEA:35423"],"termid":"GO:0102816"}


id: PBO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor SpELL","termid":"PBO:0003864"}


id: PBO:0027700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_centromeric_DNA_separation","termid":"PBO:0027700"}


id: GO:0043983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K12 acetylation (obsolete GO:0043983)","synonyms":[{"name":"histone H4 acetylation at K12","type":"exact"}],"termid":"GO:0043983"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of an axoneme consisting in a doublet microtubule. Nine of these outer doublets form the 9+0 axoneme, while the 9+2 axoneme also contains a central pair. Dynein arms attached to the doublets provide the mechanism of movement of the cilium.","definition_xrefs":["GOC:pr","PMID:5664206","Wikipedia:Axoneme","GOC:cilia","GOC:krc","PMID:5044758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal outer doublet","synonyms":[{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: PR:G2TRQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam10 gene.","definition_xrefs":["UniProtKB:G2TRQ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.19","synonyms":[{"name":"Spom972h-tam10","type":"exact"},{"name":"transcripts altered in meiosis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ9"}


id: GO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases its size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont in host (obsolete GO:0044128)","termid":"GO:0044128"}


id: PBO:0088937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Gar1","termid":"PBO:0088937"}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: GO:0008495
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105605],"is_not":false,"summary":null,"term":"GO:0008495"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoheme IX + (2E,6E)-farnesyl diphosphate + H2O = heme O + diphosphate.","definition_xrefs":["RHEA:28070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"protoheme IX farnesyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2995330","EC:2.5.1.141","MetaCyc:HEMEOSYN-RXN"],"synonyms":[{"name":"haem O synthase activity","type":"exact"},{"name":"heme A:farnesyltransferase activity","type":"exact"},{"name":"heme O synthase activity","type":"exact"},{"name":"protohaem IX farnesyltransferase activity","type":"exact"}],"termid":"GO:0008495","terms_by_termid":{"GO:0008495":null}}


id: PBO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase (predicted)","termid":"PBO:0004890"}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: GO:1900068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alkalinity.","definition_xrefs":["PMID:17023428","GOC:dgf","GOC:TermGenie","PMID:12509465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to alkaline pH","termid":"GO:1900067"},{"relation_name":"negatively_regulates","term_name":"cellular response to alkaline pH","termid":"GO:0071469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to alkaline pH","synonyms":[{"name":"down regulation of cellular response to alkaline pH","type":"exact"},{"name":"down regulation of cellular response to alkalinity","type":"related"},{"name":"down regulation of cellular response to basic pH","type":"exact"},{"name":"down-regulation of cellular response to alkaline pH","type":"exact"},{"name":"down-regulation of cellular response to alkalinity","type":"related"},{"name":"down-regulation of cellular response to basic pH","type":"exact"},{"name":"downregulation of cellular response to alkaline pH","type":"exact"},{"name":"downregulation of cellular response to alkalinity","type":"related"},{"name":"downregulation of cellular response to basic pH","type":"exact"},{"name":"inhibition of cellular response to alkaline pH","type":"narrow"},{"name":"inhibition of cellular response to alkalinity","type":"narrow"},{"name":"inhibition of cellular response to basic pH","type":"narrow"},{"name":"negative regulation of cellular response to alkalinity","type":"broad"},{"name":"negative regulation of cellular response to basic pH","type":"exact"}],"termid":"GO:1900068"}


id: GO:0009864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induced systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"induced systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (induced systemic resistance)","type":"exact"}],"termid":"GO:0009864"}


id: PR:Q76PC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mti3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q76PC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.13","synonyms":[{"name":"Spom972h-mti3","type":"exact"}],"termid":"PR:Q76PC7"}


id: GO:0009156
data:
  {"annotated_genes":["SJAG_01814","SJAG_04681","SJAG_01070","SJAG_03811","SJAG_04354","SJAG_04634","SJAG_03140","SJAG_00444","SJAG_02364","SJAG_00533","SJAG_01081","SJAG_04845","SJAG_01298","SJAG_04709","SJAG_02850","SJAG_00197","SJAG_00964","SJAG_03708","SJAG_03164","SJAG_06634","SJAG_04123","SJAG_00694","SJAG_00044","SJAG_03355","SJAG_04970","SJAG_04882","SJAG_01661","SJAG_04713","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93813,105993,111024],"is_not":false,"summary":null,"term":"GO:0009156"},{"annotations":[99507,85020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106430,110569,115002,106319,99508,95654,93905,113398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[85583,112783,89516,107981,94595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[89639,112900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[66957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[111787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[97270,59002,104340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[115003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89860,97894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[110980,88073,83617,89062,84603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03811":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04882":null,"SJAG_04970":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside monophosphate anabolism","type":"exact"},{"name":"ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"ribonucleoside monophosphate formation","type":"exact"},{"name":"ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009156","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0009156":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null}}


id: PBO:0028790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028790"}


id: MOD:00981
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium containing modified residue","termid":"MOD:00747"},{"relation_name":"is_a","term_name":"potassium containing modified residue","termid":"MOD:00849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium and potassium salt","termid":"MOD:00981"}


id: GO:0080173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial contact step made between the male gamete and the female gamete during double fertilization forming a zygote and endosperm. An example can be found in Arabidopsis thaliana.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"male-female gamete recognition during double fertilization forming a zygote and endosperm","synonyms":[{"name":"gamete recognition","type":"broad"},{"name":"male-female gamete recognition","type":"exact"}],"termid":"GO:0080173"}


id: GO:1905722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:18949025","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of trypanothione biosynthetic process","synonyms":[{"name":"regulation of trypanothione anabolism","type":"exact"},{"name":"regulation of trypanothione biosynthesis","type":"exact"},{"name":"regulation of trypanothione formation","type":"exact"},{"name":"regulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905722"}


id: GO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"regulation of lateral mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesoderm cell fate determination","type":"exact"},{"name":"regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048374"}


id: PBO:0039418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 1","termid":"PBO:0039418"}


id: GO:0047356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ribitol phosphate(n) + CDP-ribitol = ribitol phosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.14","MetaCyc:2.7.8.14-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CDP-ribitol ribitolphosphotransferase activity","secondary_identifiers":["MetaCyc:RXN-18380","RHEA:13353"],"synonyms":[{"name":"CDP-ribitol:poly(ribitol phosphate) ribitolphosphotransferase activity","type":"related"},{"name":"CDPribitol ribitolphosphotransferase activity","type":"related"},{"name":"poly(ribitol phosphate) synthetase activity","type":"related"},{"name":"polyribitol phosphate polymerase activity","type":"related"},{"name":"polyribitol phosphate synthetase activity","type":"related"},{"name":"teichoate synthase activity","type":"related"},{"name":"teichoate synthetase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047356"}


id: GO:0005547
data:
  {"annotated_genes":["SJAG_02468","SJAG_00216","SJAG_04077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84215,98510,113507],"is_not":false,"summary":null,"term":"GO:0005547"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3,4,5-trisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3', 4' and 5' positions.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_02468":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PIP3 binding","type":"exact"}],"termid":"GO:0005547","terms_by_termid":{"GO:0005547":null}}


id: SO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a Y-RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_primary_transcript","synonyms":[{"name":"Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002042"}


id: GO:0015149
data:
  {"annotated_genes":["SJAG_03820","SJAG_03608","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99069],"is_not":false,"summary":null,"term":"GO:0015149"},{"annotations":[106724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[110245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a hexose sugar, a monosaccharide with 6 carbon atoms, from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"hexose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189242","Reactome:R-HSA-5638222"],"termid":"GO:0015149","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:1903158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any L-glutamate transmembrane transporter activity that is involved in L-glutamate import into cell.","definition_xrefs":["GOC:TermGenie","GOC:dos","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete L-glutamate transmembrane transporter activity involved in L-glutamate import into cell (obsolete GO:1903158)","synonyms":[{"name":"L-glutamate transmembrane transporter activity involved in L-glutamate import into cell","type":"exact"},{"name":"glutamate/aspartate porter activity involved in L-glutamate import into cell","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity involved in L-glutamate import into cell","type":"narrow"}],"termid":"GO:1903158"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: GO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uridine kinase reaction (obsolete GO:0006224)","synonyms":[{"name":"uridine kinase reaction","type":"exact"}],"termid":"GO:0006224"}


id: GO:1900968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of sarcinapterin metabolic process","synonyms":[{"name":"regulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900968"}


id: PBO:0074424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 23","termid":"PBO:0074424"}


id: PBO:0028594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_activation_of_bipolar_cell_growth","termid":"PBO:0028594"}


id: PATO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000523 insecticide sensitivity value (obsolete PATO:0000523)","termid":"PATO:0000523"}


id: PATO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000214 reproductive function (obsolete PATO:0000214)","termid":"PATO:0000214"}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_02309","SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88863],"is_not":false,"summary":null,"term":"GO:0006562"},{"annotations":[103185,114037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0006562":null,"GO:0010133":null}}


id: PBO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032700"}


id: PBO:0087401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; light sensing pathway component that accumulates in the nucleus in response to blue light; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087401"}


id: PBO:0074296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAFB like transcription modulator","termid":"PBO:0074296"}


id: PBO:0084610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YGL210W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL211W","termid":"PBO:0084610"}


id: GO:1901386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"down-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"down-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"down-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated calcium channel","type":"broad"},{"name":"downregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"downregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"downregulation of voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated calcium channel","type":"broad"},{"name":"inhibition of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"inhibition of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"inhibition of voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of voltage-gated calcium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated calcium ion channel activity","type":"exact"},{"name":"inhibition of voltage-sensitive calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated calcium channel","type":"broad"},{"name":"negative regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"negative regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"negative regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"negative regulation of voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901386"}


