# terms

id: PBO:0013459
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol DeHydrogenase","termid":"PBO:0013459"}


id: GO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003396"}


id: GO:0036096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule that contributes to forming the mature 3' end of a miRNA from a pre-miRNA.","definition_xrefs":["PMID:22055292","GOC:sart"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-5'-exoribonuclease activity involved in pre-miRNA 3'-end processing (obsolete GO:0036096)","synonyms":[{"name":"3'-5'-exoribonuclease activity involved in pre-miRNA 3'-end processing","type":"exact"},{"name":"exonucleolytic trimming to generate 3' end of miRNA from pre-miRNA","type":"related"}],"termid":"GO:0036096"}


id: PBO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 6","termid":"PBO:0052599"}


id: PBO:0088057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; forms a complex with Elc1p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; cullin family member with similarity to Cdc53p and human CUL3","termid":"PBO:0088057"}


id: GO:0106301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-5,6-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:8631948","RHEA:49936","PMID:10491410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arachidonic acid 5,6-epoxygenase activity","termid":"GO:0106301"}


id: GO:0018412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by glucuronidation on an amino acid oxygen atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glucuronidation","termid":"GO:0018411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein O-glucuronidation","synonyms":[{"name":"protein amino acid O-glucuronidation","type":"exact"}],"termid":"GO:0018412"}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["EC:4.1.1.52","RHEA:23112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03567","MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: PBO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 2","termid":"PBO:0047683"}


id: FYPO:0003634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U1 snRNP binding by a gene product is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased U1 snRNP binding","synonyms":[{"name":"reduced U1 snRNP binding","type":"exact"}],"termid":"FYPO:0003634"}


id: PBO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prevacuole/endosomal FYVE tethering component Pep7","termid":"PBO:0089700"}


id: PBO:0089675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 catalytic subunit Sds21","termid":"PBO:0089675"}


id: SO:1001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_predicted","synonyms":[{"name":"CDS predicted","type":"exact"}],"termid":"SO:1001254"}


id: FYECO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the auxin analogue 5-adamantyl-IAA was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 5IAA","secondary_identifiers":["PMID:37783794"],"synonyms":[{"name":"5-adamantyl-IAA","type":"exact"}],"termid":"FYECO:0000437"}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: _global:has_negative_regulatory_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"_global:has_regulatory_component_activity"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"_global:negatively_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","secondary_identifiers":["RO:0002014"],"termid":"_global:has_negative_regulatory_component_activity"}


id: MOD:01885
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a biotinyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"biotinylated residue","synonyms":[{"name":"5-((3aS,4S,6aR)-hexahydro-2-oxo-1H-thieno[3,4-d]imidazol-4-yl)-1-oxopentyl","type":"exact"},{"name":"Biotinylation","type":"exact"},{"name":"BtnRes","type":"exact"}],"termid":"MOD:01885"}


id: GO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen reduces a known acceptor other than a cytochrome, an iron-sulfur protein, NAD, NADP, or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","secondary_identifiers":["EC:1.12.98.-"],"termid":"GO:0046995"}


id: PBO:0055243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2670","termid":"PBO:0055243"}


id: PBO:0056891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1IP1 antisense RNA 1","termid":"PBO:0056891"}


id: PBO:0018093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-37 deaminase Tad1 (predicted)","termid":"PBO:0018093"}


id: GO:0060962
data:
  {"annotated_genes":["SJAG_01243","SJAG_03241","SJAG_02723","SJAG_02671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102724,84114,85594,89596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01243":null,"SJAG_02671":null,"SJAG_02723":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of ribosomal protein gene transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060962","terms_by_termid":{"GO:0060963":null}}


id: PBO:0034621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphoinositide_level","termid":"PBO:0034621"}


id: GO:0043636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bisphenol A, 4,4'-(propane-2,2-diyl)diphenol, a synthetic, aromatic organic compound used as a monomer in the manufacture of polycarbonate plastic and in the manufacture of epoxy resins.","definition_xrefs":["Wikipedia:Bisphenol_A","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"bisphenol A catabolic process","synonyms":[{"name":"bisphenol-A catabolic process","type":"exact"},{"name":"bisphenol-A catabolism","type":"exact"}],"termid":"GO:0043636"}


id: PBO:0069579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 853, pseudogene","termid":"PBO:0069579"}


id: GO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"fibrinogen complex","synonyms":[{"name":"fibrinogen","type":"exact"},{"name":"fibrinogen alpha chain","type":"narrow"},{"name":"fibrinogen beta chain","type":"narrow"},{"name":"fibrinogen gamma chain","type":"narrow"}],"termid":"GO:0005577"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: GO:0032306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin secretion","synonyms":[{"name":"regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032306"}


id: PBO:0017574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box subunit Nht1","termid":"PBO:0017574"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: PBO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 33","termid":"PBO:0072156"}


id: GO:1904853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an ascospore wall.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spore cell wall","termid":"GO:0099614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ascospore wall","synonyms":[{"name":"protein localisation in ascospore wall","type":"exact"},{"name":"protein localisation to ascospore wall","type":"exact"},{"name":"protein localization in ascospore wall","type":"exact"}],"termid":"GO:1904853"}


id: GO:0060822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of an axial mesodermal fate.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in axial mesodermal cell fate specification (obsolete GO:0060822)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in axial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0060822"}


id: GO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic or lymphoid organ development","synonyms":[{"name":"haematopoietic or lymphoid organ development","type":"exact"},{"name":"haemopoietic or lymphoid organ development","type":"exact"},{"name":"hemopoietic or lymphoid organ development","type":"exact"}],"termid":"GO:0048534"}


id: SO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region which is part of the regional centromere outer repeat region.","definition_xrefs":["PMID:16407326","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dg_repeat","synonyms":[{"name":"dg repeat","type":"exact"}],"termid":"SO:0001898"}


id: PBO:0064378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS2 C-terminal like pseudogene","termid":"PBO:0064378"}


id: PATO:0002423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A round or lobulated protruding form resembling a nipple.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatous","termid":"PATO:0002423"}


id: GO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["PMID:12618131","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract morphogenesis","secondary_identifiers":["GO:0048547"],"synonyms":[{"name":"alimentary canal morphogenesis","type":"exact"},{"name":"digestive tube morphogenesis","type":"exact"},{"name":"gastrointestinal tract morphogenesis","type":"exact"},{"name":"gut morphogenesis","type":"broad"},{"name":"intestinal morphogenesis","type":"narrow"}],"termid":"GO:0048546"}


id: GO:1990474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synaptic vesicle belonging to the pool of vesicles that are the first to be released as a result of chemical or electrical stimulation e.g. by an action potential, have the highest presynaptic membrane fusion probability and correspond to about 1% of the total number of synaptic vesicles at a resting terminal bouton.","definition_xrefs":["PMID:22745285","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle","termid":"GO:0008021"},{"relation_name":"part_of","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptic vesicle, readily releasable pool","synonyms":[{"name":"RRP","type":"related"},{"name":"readily releasable pool of synaptic vesicles","type":"exact"}],"termid":"GO:1990474"}


id: GO:1904793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of euchromatin binding.","definition_xrefs":["PMID:22723415","GOC:BHF","GOC:BHF_telomere","GO_REF:0000059","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin binding","termid":"GO:0035561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of euchromatin binding","termid":"GO:1904793"}


id: GO:0002125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior of a female to protect her offspring from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal aggressive behavior","synonyms":[{"name":"maternal aggression","type":"exact"}],"termid":"GO:0002125"}


id: PBO:0038730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 25","termid":"PBO:0038730"}


id: PBO:0071581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36","termid":"PBO:0071581"}


id: GO:1905653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","PMID:27389411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"positively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of artery morphogenesis","synonyms":[{"name":"activation of arterial morphogenesis","type":"narrow"},{"name":"activation of arteriogenesis","type":"narrow"},{"name":"activation of artery morphogenesis","type":"narrow"},{"name":"positive regulation of arterial morphogenesis","type":"exact"},{"name":"positive regulation of arteriogenesis","type":"exact"},{"name":"up regulation of arterial morphogenesis","type":"exact"},{"name":"up regulation of arteriogenesis","type":"exact"},{"name":"up regulation of artery morphogenesis","type":"exact"},{"name":"up-regulation of arterial morphogenesis","type":"exact"},{"name":"up-regulation of arteriogenesis","type":"exact"},{"name":"up-regulation of artery morphogenesis","type":"exact"},{"name":"upregulation of arterial morphogenesis","type":"exact"},{"name":"upregulation of arteriogenesis","type":"exact"},{"name":"upregulation of artery morphogenesis","type":"exact"}],"termid":"GO:1905653"}


id: GO:0007295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of the egg chamber between the time it leaves the germarium and the onset of vitellogenesis. During this time both nurse cells and the oocyte undergo developmental changes including nuclear organization and cytoplasmic growth. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth of a germarium-derived egg chamber","synonyms":[{"name":"egg chamber growth","type":"exact"}],"termid":"GO:0007295"}


id: PBO:0049780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 14","termid":"PBO:0049780"}


id: GO:0097069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"},{"relation_name":"is_a","term_name":"response to thyroxine","termid":"GO:0097068"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroxine stimulus","synonyms":[{"name":"cellular response to T4 stimulus","type":"exact"}],"termid":"GO:0097069"}


id: GO:0009303
data:
  {"annotated_genes":["SJAG_01128","SJAG_01948","SJAG_05331","SJAG_03956","SJAG_02815","SJAG_01313","SJAG_04106","SJAG_02070","SJAG_04261","SJAG_01444","SJAG_00202","SJAG_00139","SJAG_02747","SJAG_02871","SJAG_03144","SJAG_00731","SJAG_02813","SJAG_03578","SJAG_01562","SJAG_04766","SJAG_01765","SJAG_01698","SJAG_00692","SJAG_02101","SJAG_02653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[105223,112512,108001,89266,91511,105810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[85687,109210,91315,83834,101854,86509,99427,109875,109586,111584,98763,91850,106754,90012,105851,83835,88137,100943,109587,110283],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"rRNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA synthesis","type":"broad"},{"name":"rRNA biosynthesis","type":"broad"},{"name":"rRNA biosynthetic process","type":"broad"}],"termid":"GO:0009303","terms_by_termid":{"GO:0006362":null,"GO:0042790":null,"GO:0042791":null}}


id: GO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic salinity response","synonyms":[{"name":"response to hyperosmotic salt stress","type":"exact"},{"name":"salt tolerance","type":"related"}],"termid":"GO:0042538"}


id: FYECO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lead ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Pb ions","synonyms":[{"name":"lead ions added","type":"exact"}],"termid":"FYECO:0000036"}


id: PBO:0059654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 20","termid":"PBO:0059654"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: GO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.","definition_xrefs":["PMID:10804170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary duct terminal end bud growth","termid":"GO:0060763"}


id: PBO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 2","termid":"PBO:0046432"}


id: GO:1901264
data:
  {"annotated_genes":["SJAG_03452","SJAG_01960","SJAG_04162","SJAG_03774","SJAG_04406","SJAG_04325","SJAG_01177","SJAG_00276","SJAG_03334","SJAG_02050","SJAG_00339","SJAG_02897","SJAG_04697","SJAG_00612","SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[106962,98937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[89432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[85118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[108623,90526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[97434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[98938,106965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[108327,89201,89434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[84521,111623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[108441,111624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[65669,101043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02897":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03774":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carbohydrate derivative transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901264","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015867":null,"GO:0034203":null,"GO:0035348":null,"GO:0035436":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: GO:0019404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol catabolic process","termid":"GO:0019407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactitol catabolic process","secondary_identifiers":["MetaCyc:GALACTITOLCAT-PWY"],"synonyms":[{"name":"galactitol breakdown","type":"exact"},{"name":"galactitol catabolism","type":"exact"},{"name":"galactitol degradation","type":"exact"}],"termid":"GO:0019404"}


id: PBO:0075529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E9","termid":"PBO:0075529"}


id: PBO:0041271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 3","termid":"PBO:0041271"}


id: GO:0051555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonols, a member of a class of vascular pigments formed by consecutive oxidative processes from the flavonoid intermediates flavanones and dihydroflavonols. Flavonols are the most widespread of the flavonoids and have a wide array of physiological activities.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"flavonol metabolic process","termid":"GO:0051554"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonol biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3101"],"termid":"GO:0051555"}


id: PBO:0078260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C","termid":"PBO:0078260"}


id: PBO:0046964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member B","termid":"PBO:0046964"}


id: RO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is sequentially adjacent to y iff x and y do not overlap and if there are no base units intervening between x and y","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequentially_adjacent_to","termid":"RO:0002515"}


id: GO:0061194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"tongue morphogenesis","termid":"GO:0043587"},{"relation_name":"part_of","term_name":"taste bud development","termid":"GO:0061193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud morphogenesis","termid":"GO:0061194"}


id: GO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a keratinocyte.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte differentiation","synonyms":[{"name":"keratinocyte cell differentiation","type":"exact"}],"termid":"GO:0030216"}


id: PBO:0065528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 3 (gene/pseudogene)","termid":"PBO:0065528"}


id: PBO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1E","termid":"PBO:0050781"}


id: PBO:0066984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 287","termid":"PBO:0066984"}


id: PBO:0056379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 10","termid":"PBO:0056379"}


id: FYPO:0004335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur during a cellular response to hydrogen peroxide. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:22139357","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction during cellular response to rapamycin","termid":"FYPO:0003425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein-protein interaction during cellular response to hydrogen peroxide","synonyms":[{"name":"abolished protein binding cellular response to hydrogen peroxide","type":"exact"},{"name":"abolished protein-protein interaction during cellular response to H2O2","type":"exact"},{"name":"protein-protein interaction abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004335"}


id: MOD:00908
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies a glycine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified glycine residue","synonyms":[{"name":"ModGly","type":"exact"}],"termid":"MOD:00908"}


id: GO:0061967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of the type asymmetry in an organism's body plan or part of an organism that established the pattern characteristic to its left side.","definition_xrefs":["GOC:18629866","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of left/right asymmetry","termid":"GO:0061966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of left sidedness","termid":"GO:0061967"}


id: FYPO:0002452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell contains one or more septa, has abnormal morphology (i.e. size, shape, or structure) and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable septated vegetative cell with abnormal cell morphology","synonyms":[{"name":"lethal; septated vegetative cell with abnormal cell morphology","type":"exact"}],"termid":"FYPO:0002452"}


id: PATO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000392 limited (obsolete PATO:0000392)","termid":"PATO:0000392"}


id: PBO:0033752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sister_chromatid_meiotic_recombination","termid":"PBO:0033752"}


id: PBO:0069696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 975, pseudogene","termid":"PBO:0069696"}


id: PBO:0016113
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin involved in G1","termid":"PBO:0016113"}


id: FYPO:0000302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a cell's response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal response to pheromone","synonyms":[{"name":"abnormal response to pheromone involved in conjugation with cellular fusion","type":"exact"},{"name":"defective response to pheromone","type":"exact"}],"termid":"FYPO:0000302"}


id: FYPO:0006657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which acid phosphatase activity is absent during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished acid phosphatase activity","termid":"FYPO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished acid phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"acid phosphatase activity abolished during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0006657"}


id: GO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The asymmetrical division of a neuroblast, the neural precursor in the central nervous system, giving rise to another neuroblast and a ganglion mother cell.","definition_xrefs":["PMID:11250167","PMID:11163136"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroblast division (obsolete GO:0045034)","synonyms":[{"name":"neuroblast cell division","type":"exact"},{"name":"neuroblast division","type":"exact"},{"name":"neuroblast division (sensu Nematoda and Protostomia)","type":"exact"},{"name":"neuroblast division (sensu Vertebrata)","type":"exact"}],"termid":"GO:0045034"}


id: GO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle orientation checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic spindle checkpoint signaling","termid":"GO:0072476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle spindle orientation checkpoint signaling","synonyms":[{"name":"mitotic cell cycle spindle orientation checkpoint effector process","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle orientation checkpoint","type":"exact"}],"termid":"GO:0072482"}


id: GO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of epidermal stem cells within a population of cells.","definition_xrefs":["PMID:17666529","GOC:nhn","CL:1000428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal stem cell homeostasis","termid":"GO:0036334"}


id: PBO:0074881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 60","termid":"PBO:0074881"}


id: FYPO:0002803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuole organization is abnormal. Vacuole organization results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["PomBase:mah","GO:0007033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole organization","synonyms":[{"name":"abnormal vacuolar organisation","type":"exact"},{"name":"abnormal vacuolar organization","type":"exact"},{"name":"abnormal vacuole organisation","type":"exact"}],"termid":"FYPO:0002803"}


id: PBO:0089595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Spt16","termid":"PBO:0089595"}


id: PBO:0079623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M pseudogene 1","termid":"PBO:0079623"}


id: PBO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatic mRNAs transcribed in cid14delta are not translated","termid":"PBO:0013441"}


id: GO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type III hypersensitivity","termid":"GO:0001803"}


id: GO:1901501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xylene stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to xylene","termid":"GO:1901501"}


id: GO:0106322
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99565],"is_not":false,"summary":null,"term":"GO:0106322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD+ = S-formylglutathione + NADH + H+.","definition_xrefs":["RHEA:19985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase (NAD(P)+) activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106322","terms_by_termid":{"GO:0106322":null}}


id: PBO:0040186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginase and isoaspartyl peptidase 1","termid":"PBO:0040186"}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: PBO:0055575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3011","termid":"PBO:0055575"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["PMID:17719541","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PR:Q10175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27F1.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase C27F1.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.06c","synonyms":[{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC27F1.06c","type":"exact"}],"termid":"PR:Q10175"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: GO:0010776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic mismatch repair","termid":"GO:0000710"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0006281","GO:0007049"],"is_obsolete":false,"name":"meiotic mismatch repair involved in meiotic gene conversion","termid":"GO:0010776"}


id: PBO:0011447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec3","termid":"PBO:0011447"}


id: PBO:0026682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0026682"}


id: PBO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archael histone family protein","termid":"PBO:0001505"}


id: GO:0007290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in shape of the spermatid nucleus from a spherical structure to an elongated organelle, during the latter part of spermatid differentiation.","definition_xrefs":["GOC:bf","GOC:jl","ISBN:0879694238","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid nucleus elongation","synonyms":[{"name":"spermatid nuclear elongation","type":"exact"}],"termid":"GO:0007290"}


id: PBO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ctr4","termid":"PBO:0000340"}


id: SO:00000040002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where the stop codon of an upstream open reading frame is lost.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:00000010002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_loss_variant","synonyms":[{"name":"uSTOP_lost","type":"exact"}],"termid":"SO:00000040002382"}


id: GO:0006646
data:
  {"annotated_genes":["SJAG_04792","SJAG_01918","SJAG_01233","SJAG_02902","SJAG_02980","SJAG_03524","SJAG_04628","SJAG_04930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84948,85519,90755,92515,100058,100416,110743,114492],"is_not":false,"summary":null,"term":"GO:0006646"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_01918":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_04628":null,"SJAG_04792":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylethanolamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylethanolamine anabolism","type":"exact"},{"name":"phosphatidylethanolamine biosynthesis","type":"exact"},{"name":"phosphatidylethanolamine formation","type":"exact"},{"name":"phosphatidylethanolamine synthesis","type":"exact"}],"termid":"GO:0006646","terms_by_termid":{"GO:0006646":null}}


id: GO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the trabecular meshwork over time, from its formation to the mature structure. The trabecular meshwork is a fenestrated endothelial-like tissue situated at the intersection of the cornea and the iris. The trabecular meshwork provides drainage for the aqueous humor.","definition_xrefs":["PMID:20568247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecular meshwork development","termid":"GO:0002930"}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: PBO:0053977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1289","termid":"PBO:0053977"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: GO:0003025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neural regulation of blood pressure in which baroreceptors sense the amount of stretch occurring in vessels and respond to the input via central nervous system control.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by baroreceptor feedback","synonyms":[{"name":"baroreceptor regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003025"}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["RHEA:16581","MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: PBO:0088396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family Adi1","termid":"PBO:0088396"}


id: PBO:0088751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Coq8","termid":"PBO:0088751"}


id: PBO:0073177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein I","termid":"PBO:0073177"}


id: PBO:0027340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_synthase_activity","termid":"PBO:0027340"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: GO:0097652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A phosphatidylinositol 3-kinase complex that contains a catalytic subunit of a phosphatidylinositol 3-kinase (PI3K) enzyme and one or more adaptor proteins. There is no known obligatory regulatory subunit. The class II PI3K (PI3KC2) subfamily of genes has members in vertebrates, worm and fly, but none in yeast.","definition_xrefs":["PMID:24587488","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex","termid":"GO:0005942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class II","synonyms":[{"name":"class II PI3K complex","type":"exact"},{"name":"class II phosphatidylinositol 3-kinase complex","type":"exact"}],"termid":"GO:0097652"}


id: GO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule atrial natriuretic peptide.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial natriuretic peptide","synonyms":[{"name":"blood pressure regulation by ANP","type":"related"},{"name":"blood pressure regulation by atrial natriuretic peptide","type":"exact"}],"termid":"GO:0003050"}


id: MOD:00314
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycine cholesterol ester.","definition_xrefs":["Unimod:432#C-term","PubMed:8824192","ChEBI:143135","RESID:AA0309","PubMed:11111088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cholesterol ester","synonyms":[{"name":"C-cholesterol","type":"related"},{"name":"LIPID Cholesterol glycine ester","type":"exact"},{"name":"cholesterol ester","type":"related"},{"name":"cholesteryl glycinate","type":"exact"},{"name":"glycine cholest-5-en-3beta-ol ester","type":"exact"},{"name":"glycine cholesterol ester","type":"exact"},{"name":"hedgehog lipophilic adduct","type":"exact"}],"termid":"MOD:00314"}


id: PBO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis Nip7 (predicted)","termid":"PBO:0016099"}


id: PBO:0078733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-2","termid":"PBO:0078733"}


id: PBO:0063230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin related 15","termid":"PBO:0063230"}


id: GO:0003142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cardiogenic plate are generated and organized. The cardiogenic plate is the first recognizable structure derived from the heart field.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiogenic plate morphogenesis","synonyms":[{"name":"cardiac crescent morphogenesis","type":"exact"}],"termid":"GO:0003142"}


id: GO:0110023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:26512644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"},{"relation_name":"is_a","term_name":"negative regulation of myoblast proliferation","termid":"GO:2000818"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle myoblast proliferation","termid":"GO:0110023"}


id: PR:O13913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C11.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.07","synonyms":[{"name":"Spom972h-SPAC23C11.07","type":"exact"}],"termid":"PR:O13913"}


id: GO:0015762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which rhamnose is transported across a lipid bilayer, from one side of a membrane to the other. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"rhamnose transmembrane transport","synonyms":[{"name":"rhamnose transport","type":"related"}],"termid":"GO:0015762"}


id: GO:0099136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a non-reproductive fruiting body formed by aggregation of cells with different genotypes.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric colonial development","termid":"GO:0099135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chimeric non-reproductive fruiting body development","termid":"GO:0099136"}


id: PR:O59753
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-A cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10142:SF0","PRO:DNx","OMA:SCHPO02497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.03","secondary_identifiers":["UniProtKB:O59753"],"synonyms":[{"name":"Spom972h-XPA","type":"exact"},{"name":"XP-A family homolog rhp14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59753"}


id: PBO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: GO:0042219
data:
  {"annotated_genes":["SJAG_00903","SJAG_03316","SJAG_01612","SJAG_04858","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104787,94470,98342,95288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[90025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_01612":null,"SJAG_02100":null,"SJAG_03316":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular modified amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid derivative catabolic process","type":"exact"},{"name":"cellular amino acid derivative breakdown","type":"exact"},{"name":"cellular amino acid derivative catabolic process","type":"exact"},{"name":"cellular amino acid derivative catabolism","type":"exact"},{"name":"cellular amino acid derivative degradation","type":"exact"},{"name":"cellular modified amino acid breakdown","type":"exact"},{"name":"cellular modified amino acid catabolism","type":"exact"},{"name":"cellular modified amino acid degradation","type":"exact"},{"name":"modified amino acid catabolic process","type":"exact"},{"name":"modified amino acid catabolism","type":"exact"}],"termid":"GO:0042219","terms_by_termid":{"GO:0006660":null,"GO:0006751":null}}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["PMID:23708524","GOC:autophagy","PMID:26076903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"lipophagy","termid":"GO:0061724"}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: GO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ribulokinase activity","secondary_identifiers":["RHEA:22072","MetaCyc:RIBULOKIN-RXN"],"synonyms":[{"name":"ATP:L(or D)-ribulose 5-phosphotransferase activity","type":"related"},{"name":"L-ribulokinase activity","type":"exact"},{"name":"ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0008741"}


id: PBO:0029715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell","termid":"PBO:0029715"}


id: GO:0010578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase (AC) activity that is an integral part of a G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:signaling","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase activity","termid":"GO:0045761"},{"relation_name":"part_of","term_name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","termid":"GO:0007188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase activity involved in G protein-coupled receptor signaling pathway","synonyms":[{"name":"regulation of adenylate cyclase activity involved in G-protein coupled receptor signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signaling pathway","type":"exact"},{"name":"regulation of adenylate cyclase activity involved in G-protein signalling","type":"exact"}],"termid":"GO:0010578"}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: PBO:0074632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 26","termid":"PBO:0074632"}


id: PBO:0091308
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAB6A","termid":"PBO:0091308"}


id: PBO:0001917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoric ester hydrolase Ssu72 (predicted)","termid":"PBO:0001917"}


id: GO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SNARE complex disassembly","termid":"GO:0035541"}


id: PBO:0055334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2762","termid":"PBO:0055334"}


id: SO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme recognition site that, when cleaved, results in no overhangs.","definition_xrefs":["SO:ke","SBOL:jgquinn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_recognition_site","termid":"SO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blunt_end_restriction_enzyme_cleavage_site","synonyms":[{"name":"blunt end restriction enzyme cleavage site","type":"exact"}],"termid":"SO:0001691"}


id: PBO:0069440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 705, pseudogene","termid":"PBO:0069440"}


id: GO:0044248
data:
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id: PBO:0084568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in the synthesis of GlcNAc-PI; N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; human and mouse GPI1 are functional homologs","termid":"PBO:0084568"}


id: GO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A T cell receptor complex in which the TCR heterodimer comprises gamma and delta chains, associated with the CD3 complex; recognizes antigen directly, without a requirement for processing and presentation by an MHC protein.","definition_xrefs":["GOC:mah","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell receptor complex","termid":"GO:0042101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-delta T cell receptor complex","synonyms":[{"name":"gamma-delta T lymphocyte receptor complex","type":"exact"},{"name":"gamma-delta T-cell receptor complex","type":"exact"},{"name":"gamma-delta T-lymphocyte receptor complex","type":"exact"},{"name":"gamma-delta TCR complex","type":"exact"}],"termid":"GO:0042106"}


id: GO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor production","termid":"GO:0010575"}


id: PBO:0090225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1","termid":"PBO:0090225"}


id: PBO:0041545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 114","termid":"PBO:0041545"}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: PBO:0069588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 862, pseudogene","termid":"PBO:0069588"}


id: GO:0160091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of circular RNAs (circRNAs) by back-splicing circularization of pre-mRNAs in a spliceosome-dependent process.","definition_xrefs":["PMID:25768908","PMID:28625552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"spliceosome-depend formation of circular RNA","termid":"GO:0160091"}


id: PBO:0073109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 5","termid":"PBO:0073109"}


id: PBO:0065778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 1","termid":"PBO:0065778"}


id: GO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acetone, propan-2-one.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone metabolic process (obsolete GO:0043443)","synonyms":[{"name":"2-propanone metabolic process","type":"exact"},{"name":"2-propanone metabolism","type":"exact"},{"name":"acetone metabolism","type":"exact"},{"name":"dimethyl ketone metabolic process","type":"exact"},{"name":"dimethyl ketone metabolism","type":"exact"},{"name":"propan-2-one metabolic process","type":"exact"},{"name":"propan-2-one metabolism","type":"exact"}],"termid":"GO:0043443"}


id: GO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075206)","synonyms":[{"name":"positive regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075206"}


id: PBO:0040859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biliverdin reductase A","termid":"PBO:0040859"}


id: PBO:0069570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 842, pseudogene","termid":"PBO:0069570"}


id: GO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of eosinophil degranulation","synonyms":[{"name":"regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043309"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


id: FYPO:0006840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which LinE complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal LinE complex assembly","synonyms":[{"name":"normal linear element protein complex assembly","type":"exact"}],"termid":"FYPO:0006840"}


id: PBO:0064438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich nuclear receptor coactivator 1","termid":"PBO:0064438"}


id: GO:0098929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of spine apparatus membrane (obsolete GO:0098929)","termid":"GO:0098929"}


id: GO:0090485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of the standard number of chromosomes in a cell.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome number maintenance (obsolete GO:0090485)","synonyms":[{"name":"diploidization","type":"related"},{"name":"haploidization","type":"related"}],"termid":"GO:0090485"}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: GO:1903255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of hercynylselenocysteine.","definition_xrefs":["PMID:24828577","GO_REF:0000068","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine biosynthetic process (obsolete GO:1903255)","synonyms":[{"name":"hercynylselenocysteine anabolism","type":"exact"},{"name":"hercynylselenocysteine biosynthesis","type":"exact"},{"name":"hercynylselenocysteine formation","type":"exact"},{"name":"hercynylselenocysteine synthesis","type":"exact"}],"termid":"GO:1903255"}


id: PBO:0017576
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression level is tightly controlled so that deletion of either copy is compensated","termid":"PBO:0017576"}


id: PBO:0049768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 5","termid":"PBO:0049768"}


id: PBO:0064824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3F","termid":"PBO:0064824"}


id: PBO:0044367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, testis, pseudogene","termid":"PBO:0044367"}


id: GO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of platelet aggregation in another organism.","definition_xrefs":["GOC:bf","PMID:11453648","GOC:fj","PMID:18804547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of blood coagulation in another organism","termid":"GO:0035807"},{"relation_name":"is_a","term_name":"perturbation of platelet aggregation in another organism","termid":"GO:0035892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"induction of platelet aggregation in another organism","synonyms":[{"name":"positive regulation of platelet aggregation in another organism","type":"related"},{"name":"positive regulation of platelet aggregation in other organism","type":"exact"},{"name":"up-regulation of platelet aggregation in other organism","type":"related"},{"name":"upregulation of platelet aggregation in other organism","type":"exact"}],"termid":"GO:0035894"}


id: PATO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated","termid":"PATO:0001154"}


id: PBO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-2","termid":"PBO:0052919"}


id: PBO:0040773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEND7 divergent transcript","termid":"PBO:0040773"}


id: PBO:0075217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein 13","termid":"PBO:0075217"}


id: PBO:0045539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 1","termid":"PBO:0045539"}


id: GO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving naphthalene-containing compounds.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene-containing compound metabolic process (obsolete GO:0090420)","termid":"GO:0090420"}


id: GO:0021861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the forebrain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GO_REF:0000021","PMID:16226447","GOC:dph","GOC:dgh","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial glial cell differentiation","termid":"GO:0060019"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain radial glial cell differentiation","synonyms":[{"name":"radial glial cell differentiation in forebrain","type":"exact"}],"termid":"GO:0021861"}


id: GO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Granule free cytoplasm, lying immediately below the plasma membrane.","definition_xrefs":["PMID:12211103","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ectoplasm (obsolete GO:0043265)","termid":"GO:0043265"}


id: GO:0140563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine.","definition_xrefs":["RHEA:56064","EC:2.4.2.42","PMID:30127001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase activity","termid":"GO:0140563"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: GO:0070911
data:
  {"annotated_genes":["SJAG_04778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84327],"is_not":false,"summary":null,"term":"GO:0070911"}]},"cv_name":"biological_process","definition":"The nucleotide-excision repair process in which DNA lesions are removed from nontranscribed strands and from transcriptionally silent regions over the entire genome.","definition_xrefs":["PMID:10197977","PMID:18794354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"global genome nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GG-NER","type":"exact"},{"name":"GGR","type":"exact"},{"name":"global genome NER","type":"exact"},{"name":"global genomic nucleotide-excision repair","type":"exact"},{"name":"global genomic repair","type":"exact"}],"termid":"GO:0070911","terms_by_termid":{"GO:0070911":null}}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: PBO:0029765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_double-strand_break_site","termid":"PBO:0029765"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: PBO:0050411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D like","termid":"PBO:0050411"}


id: PBO:0004514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific cyclin Crs1","termid":"PBO:0004514"}


id: PBO:0049852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 1","termid":"PBO:0049852"}


id: PBO:0087234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity and recovery from heat shock; required for the arrest of secretion response; WSC2 has a paralog, WSC3, that arose from the whole genome duplication","termid":"PBO:0087234"}


id: PBO:0085755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in bud growth and assembly of the septin ring; proposed to have kinase-dependent and kinase-independent activities; negatively regulates Fpk1p kinase that stimulates phospholipid flippases Dnf1p and Dnf2p; undergoes autophosphorylation; similar to Hsl1p; GIN4 has a paralog, KCC4, that arose from the whole genome duplication","termid":"PBO:0085755"}


id: MOD:01691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-(12-ketomyristoyl)-L-cysteine.","definition_xrefs":["PubMed:19053188","RESID:AA0517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(12-ketomyristoyl)-L-cysteine","synonyms":[{"name":"2-(12-oxotetradecanoyl)amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-(12-oxomyristoyl)cysteine","type":"exact"},{"name":"N-(12-ketomyristoyl)-L-cysteine","type":"exact"},{"name":"N-(12-oxotetradecanoyl)cysteine","type":"exact"}],"termid":"MOD:01691"}


id: PBO:0031406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_with_long_tip","termid":"PBO:0031406"}


id: FYPO:0007490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a mannosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal mannosyltransferase activity","termid":"FYPO:0007490"}


id: GO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiribosomal structure representing a linear array of ribosomes held together by messenger RNA. They represent the active complexes in cellular protein synthesis and are able to incorporate amino acids into polypeptides both in vivo and in vitro.","definition_xrefs":["ISBN:0198506732","NIF_Subcellular:sao1038025871"],"gene_count":0,"genotype_count":0,"name":"obsolete polysome (obsolete GO:0005844)","secondary_identifiers":["Wikipedia:Polysome"],"synonyms":[{"name":"polyribosome","type":"exact"}],"termid":"GO:0005844"}


id: PR:O14081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.16c","synonyms":[{"name":"Spom972h-SPACUNK4.16c","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14081"}


id: PBO:0065893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39B, member RAS oncogene family","termid":"PBO:0065893"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: GO:0031378
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity, located in a plastid.","definition_xrefs":["GOC:mah","PMID:12957385","ISBN:0471331309","ISBN:0716720094"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid type II fatty acid synthase complex (obsolete GO:0031378)","synonyms":[{"name":"plastid type II FAS complex","type":"exact"},{"name":"plastid type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031378"}


id: PBO:0057392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548e","termid":"PBO:0057392"}


id: PBO:0082478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbonic anhydrase; metalloenzyme that catalyzes CO2 hydration to bicarbonate, which is an important metabolic substrate, and protons; not expressed under conditions of high CO2, such as inside a growing colony, but transcription is induced in response to low CO2 levels, such as on the colony surface in ambient air; poorly transcribed under aerobic conditions and at an undetectable level under anaerobic conditions; abundance increases in response to DNA replication stress","termid":"PBO:0082478"}


id: FYPO:0008175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal oxygen consumption","termid":"FYPO:0008175"}


id: PBO:0004270
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.2","termid":"PBO:0004270"}


id: PBO:0074556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 9","termid":"PBO:0074556"}


id: PBO:0082582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin associated high mobility group (HMG) family member; involved in compacting, bending, bridging and looping DNA; rDNA-binding component that regulates transcription from RNA polymerase I promoters; regulates start site selection of ribosomal protein genes via RNA polymerase II promoters; role in genome maintenance; associates with a 5'-3' DNA helicase and Fpr1p, a prolyl isomerase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082582"}


id: PBO:0074337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2","termid":"PBO:0074337"}


id: GO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the trochlear nerve to attain its fully functional state. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve maturation","synonyms":[{"name":"CN IV maturation","type":"related"}],"termid":"GO:0021640"}


id: PBO:0048032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 3","termid":"PBO:0048032"}


id: PBO:0028619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U1_snRNP_binding","termid":"PBO:0028619"}


id: PBO:0049520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 1Q","termid":"PBO:0049520"}


id: GO:0150052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse.","definition_xrefs":["PMID:16672654","GOC:aruk","PMID:28185854","GOC:bc","PMID:16394100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynapse assembly","termid":"GO:0150052"}


id: SO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of alteration of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alteration_attribute","synonyms":[{"name":"alteration attribute","type":"exact"}],"termid":"SO:0001508"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: PBO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase (predicted)","termid":"PBO:0001272"}


id: FYPO:0003910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of retrotransposon nucleocapsid complexes (also called virus-like particles, VLPs) to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished VLP localization to nucleus during vegetative growth","synonyms":[{"name":"VLP localization to nucleus abolished during vegetative growth","type":"exact"},{"name":"abolished VLP localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization in nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization to nucleus during vegetative growth during mitotic cell cycle","type":"related"},{"name":"abolished retrotransposon nucleocapsid localization to nucleus during vegetative growth","type":"exact"},{"name":"abolished virus-like particle localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0003910"}


id: PBO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 52","termid":"PBO:0071050"}


id: GO:0050238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + acceptor = isopyridoxal + reduced acceptor.","definition_xrefs":["EC:1.1.99.9","MetaCyc:PYRIDOXINE-5-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxine 5-dehydrogenase activity","secondary_identifiers":["RHEA:14497"],"synonyms":[{"name":"pyridoxal-5-dehydrogenase activity","type":"related"},{"name":"pyridoxin 5-dehydrogenase activity","type":"related"},{"name":"pyridoxine 5'-dehydrogenase activity","type":"related"},{"name":"pyridoxine:(acceptor) 5-oxidoreductase activity","type":"related"},{"name":"pyridoxine:acceptor 5-oxidoreductase activity","type":"related"},{"name":"pyridoxol 5-dehydrogenase activity","type":"related"}],"termid":"GO:0050238"}


id: GO:0010050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the transition of a plant from a juvenile phase of vegetative development to an adult phase of vegetative development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative phase change","termid":"GO:0010050"}


id: GO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, core RNA polymerase II binding (obsolete GO:0000991)","synonyms":[{"name":"core RNA polymerase II binding transcription factor activity","type":"exact"}],"termid":"GO:0000991"}


id: PBO:0047440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 11","termid":"PBO:0047440"}


id: PBO:0017452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mereotopologically_related_to","termid":"PBO:0017452"}


id: PBO:0034450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiosis_I","termid":"PBO:0034450"}


id: GO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a symbiont that results in the death of a cell in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:23230295","PMID:11123917","PMID:26633512","GOC:add","PMID:22992735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated killing of host cell","synonyms":[{"name":"killing by symbiont of host cells","type":"exact"},{"name":"pathogenesis","type":"related"}],"termid":"GO:0001907"}


id: GO:1904084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of epiboly.","definition_xrefs":["GO_REF:0000058","PMID:24892953","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of epiboly (obsolete GO:1904084)","synonyms":[{"name":"down regulation of epiboly","type":"exact"},{"name":"down-regulation of epiboly","type":"exact"},{"name":"downregulation of epiboly","type":"exact"},{"name":"inhibition of epiboly","type":"narrow"},{"name":"negative regulation of epiboly","type":"exact"}],"termid":"GO:1904084"}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0036248
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ4","termid":"PBO:0036248"}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: PBO:0058409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4778","termid":"PBO:0058409"}


id: PBO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med10","termid":"PBO:0004653"}


id: MOD:00828
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tryptophan residue and an L-cysteine residue by a thioester bond to form S-(L-tryptophanyl)-L-cysteine.","definition_xrefs":["PubMed:16030216","RESID:AA0417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-tryptophan residue","termid":"MOD:02057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-tryptophanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Tryptophanyl cysteine thioester (Cys-Trp)","type":"exact"},{"name":"S-(L-tryptophanyl)-L-cysteine","type":"exact"},{"name":"S-[2-amino-3-(1H-indol-3-yl)propanoyl]cysteine","type":"exact"},{"name":"XLNK1TrpSCys","type":"exact"},{"name":"tryptophan cysteine thioester","type":"exact"}],"termid":"MOD:00828"}


id: RO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_ingredient","synonyms":[{"name":"has active pharmaceutical ingredient","type":"related"},{"name":"has active substance","type":"exact"}],"termid":"RO:0002248"}


id: PBO:0069575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 848, pseudogene","termid":"PBO:0069575"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: GO:0039724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of host I-kappa-B kinase epsilon (IKBKE/IKK-epsilon/IKK-E).","definition_xrefs":["PMID:24173023","PMID:22532683","PMID:19153231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity","secondary_identifiers":["VZ:4478"],"synonyms":[{"name":"inhibition of host IKBKE by virus","type":"related"},{"name":"suppression by virus of host IKBKE activity","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity","type":"narrow"}],"termid":"GO:0039724"}


id: PBO:0042402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14A","termid":"PBO:0042402"}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: PBO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1A","termid":"PBO:0039573"}


id: GO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051439)","synonyms":[{"name":"mitotic APC regulator","type":"narrow"},{"name":"mitotic SCF complex regulator","type":"narrow"},{"name":"mitotic anaphase-promoting complex regulator","type":"narrow"},{"name":"mitotic ubiquitin ligase regulator","type":"related"},{"name":"mitotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051439"}


id: FYPO:0006344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the plasma membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"protein mislocalized to plasma membrane during vegetative growth","synonyms":[{"name":"ectopic protein localization to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalised to plasma membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006344"}


id: GO:0060322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a head from an initial condition to its mature state. The head is the anterior-most division of the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head development","termid":"GO:0060322"}


id: PBO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 27","termid":"PBO:0072498"}


id: FYPO:0005639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to iron ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to iron starvation","type":"exact"},{"name":"normal RNA level during iron ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005639"}


id: FYPO:0005282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to inositol starvation.","definition_xrefs":["PomBase:mah","PMID:19606215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to inositol starvation","synonyms":[{"name":"decreased growth during cellular response to inositol starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to inositol starvation","type":"exact"},{"name":"hypersensitive to inositol starvation","type":"exact"},{"name":"reduced growth in low inositol","type":"related"},{"name":"sensitive to inositol depletion","type":"exact"},{"name":"sensitive to inositol deprivation","type":"exact"},{"name":"sensitive to inositol starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to inositol starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0005282"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: PBO:0004505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg5","termid":"PBO:0004505"}


id: PBO:0084785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase); dephosphorylates phosphatidylglycerolphosphate to generate phosphatidylglycerol, an essential step during cardiolipin biosynthesis; null mutant is sensitive to tunicamycin, DTT","termid":"PBO:0084785"}


id: GO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cAMP-mediated signaling","synonyms":[{"name":"3',5' cAMP-mediated signaling","type":"exact"},{"name":"3',5' cAMP-mediated signalling","type":"exact"},{"name":"3',5'-cAMP-mediated signaling","type":"exact"},{"name":"3',5'-cAMP-mediated signalling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signaling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signalling","type":"exact"},{"name":"cAMP signaling","type":"exact"},{"name":"cAMP signalling","type":"exact"},{"name":"cAMP-mediated signal transduction","type":"exact"},{"name":"cAMP-mediated signalling","type":"exact"},{"name":"cyclic AMP-mediated signaling","type":"exact"},{"name":"cyclic AMP-mediated signalling","type":"exact"}],"termid":"GO:0019933"}


id: GO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide metabolic process","synonyms":[{"name":"depsipeptide metabolism","type":"exact"}],"termid":"GO:0050761"}


id: PBO:0083440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR378W","termid":"PBO:0083440"}


id: GO:1900008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["PMID:15020466","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900008)","synonyms":[{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900008"}


id: GO:0036202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + O2 + NADPH + H+ = ent-11beta-hydroxycassa-12,15-diene + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ent-cassa-12,15-diene 11-hydroxylase activity","secondary_identifiers":["RHEA:31967","KEGG_REACTION:R09866"],"synonyms":[{"name":"ent-cassadiene C11alpha-hydroxylase activity","type":"related"}],"termid":"GO:0036202"}


id: PBO:0068856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 95, pseudogene","termid":"PBO:0068856"}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: GO:0072760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a GW 7647 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to GW 7647","termid":"GO:1901593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to GW 7647","termid":"GO:0072760"}


id: PBO:0082888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin (Bur2p)-dependent protein kinase; subunit of the CDK-cyclin BUR kinase complex with Bur2p; regulates Set2p-dependent H3K36 trimethylation; regulates transcriptional elongation through the phosphorylation of the carboxy-terminal domain (CTD) of Rpo21p; stimulates recruitment of the PAF complex through Spt5p CTD phosphorylation; recruits Spt6p to the CTD at the onset of transcription; regulates telomere elongation; regulated by Cak1p; similar to metazoan CDK9 proteins","termid":"PBO:0082888"}


id: GO:0033462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"GGC codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033462"}


id: GO:0048084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of the adult pattern of pigmentation in the cuticle of an organism.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chitin-based cuticle tanning","termid":"GO:0045801"},{"relation_name":"is_a","term_name":"positive regulation of cuticle pigmentation","termid":"GO:0048081"},{"relation_name":"is_a","term_name":"regulation of adult chitin-containing cuticle pigmentation","termid":"GO:0048082"},{"relation_name":"positively_regulates","term_name":"adult chitin-containing cuticle pigmentation","termid":"GO:0048085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult chitin-containing cuticle pigmentation","synonyms":[{"name":"activation of adult chitin-containing cuticle pigmentation","type":"narrow"},{"name":"stimulation of adult chitin-containing cuticle pigmentation","type":"narrow"},{"name":"up regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"up-regulation of adult chitin-containing cuticle pigmentation","type":"exact"},{"name":"upregulation of adult chitin-containing cuticle pigmentation","type":"exact"}],"termid":"GO:0048084"}


id: PBO:0111891
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CHY","termid":"PBO:0111891"}


id: PBO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2 (predicted)","termid":"PBO:0002441"}


id: FYPO:0000037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize cysteine, and therefore requires cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for cysteine","synonyms":[{"name":"cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0000037"}


id: PBO:0054323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1716","termid":"PBO:0054323"}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: PBO:0044211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin V","termid":"PBO:0044211"}


id: PBO:0038597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase short/branched chain","termid":"PBO:0038597"}


id: PBO:0056728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm posterior bHLH transcription factor 1","termid":"PBO:0056728"}


id: SO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading frame that could encode a full-length protein but which contains obvious mid-sequence disablements (frameshifts or premature stop codons).","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disabled_reading_frame","synonyms":[{"name":"dORF","type":"exact"},{"name":"disabled ORF","type":"exact"},{"name":"disabled_reading frame","type":"related"}],"termid":"SO:0002048"}


id: PBO:0088084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing substrate adaptor for Cdc48p; ubiquitin regulatory X domain-containing protein that acts as a substrate recruiting cofactor for Cdc48p; positively regulates Glc7p PPase activity to promote growth and mitotic progression in complex with Cdc48p; ubiquitinated protein interactor involved in ER-associated degradation (ERAD); regulated by nuclear Ub-dependent degradation (INMAD pathway) independent of the Asi and Doa10 complexes; homolog of human p47 (NSFL1C)","termid":"PBO:0088084"}


id: GO:0051455
data:
  {"annotated_genes":["SJAG_01805","SJAG_05266","SJAG_03217","SJAG_05319","SJAG_02346","SJAG_03327","SJAG_03220","SJAG_03989","SJAG_01371","SJAG_05220","SJAG_01211","SJAG_01278","SJAG_03437","SJAG_01775","SJAG_00418","SJAG_02814","SJAG_03926","SJAG_03683","SJAG_01224","SJAG_01837","SJAG_00918","SJAG_00794","SJAG_02731","SJAG_04076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85279,85879,87099,89915,91415,91669,94006,94723,96599,97413,98523,101541,103574,103895,104956,105218,105965,106386,106427,109301,110166,111990,112975],"is_not":false,"summary":null,"term":"GO:0051455"},{"annotations":[112746],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis I. During meiosis I sister kinetochores are lying next to each other facing the same spindle pole and monopolar attachment of the chromatid to the spindle occurs.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"monopolar attachment","type":"related"},{"name":"sister kinetochore mono-orientation","type":"related"}],"termid":"GO:0051455","terms_by_termid":{"GO:0051455":null,"GO:1904967":null}}


id: PBO:0050626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 1","termid":"PBO:0050626"}


id: PBO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0001026"}


id: GO:0098786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"biofilm matrix organization","termid":"GO:0098784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix disassembly","termid":"GO:0098786"}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","secondary_identifiers":["MetaCyc:THIOREDOX-PWY"],"synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: FYPO:0000418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitotic cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytokinesis","synonyms":[{"name":"cytokinesis: decreased","type":"related"},{"name":"decreased cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased cytokinesis during vegetative growth","type":"exact"},{"name":"decreased mitotic cytokinesis","type":"exact"},{"name":"reduced cytokinesis","type":"exact"}],"termid":"FYPO:0000418"}


id: PBO:0035880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035880"}


id: GO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds and containing a nonprotein group consisting of a lipid or lipids.","definition_xrefs":["PMID:12077222","PMID:2757794","GOC:add","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"lipopeptide binding","synonyms":[{"name":"bacterial lipopeptide binding","type":"narrow"},{"name":"bacterial lipoprotein binding","type":"related"}],"termid":"GO:0071723"}


id: PR:Q9UT53
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC806.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide/nicotinic acid mononucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.06c","synonyms":[{"name":"NMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMN/NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NaMNAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC806.06c","type":"exact"},{"name":"nicotinamide-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nicotinate-nucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT53"}


id: PBO:0017069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, DNAJ domain","termid":"PBO:0017069"}


id: PBO:0078541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 33","termid":"PBO:0078541"}


id: PBO:0083694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: GO:0060560
data:
  {"annotated_genes":["SJAG_02169","SJAG_00244","SJAG_02392","SJAG_01017","SJAG_03581","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90680,85994,91951],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[90123,84044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[86848],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111112],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental growth involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"differential growth","type":"exact"}],"termid":"GO:0060560","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0042242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 5","termid":"PBO:0042242"}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: GO:0043857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-ornithine + carbamoyl phosphate = N(2)-acetyl-L-citrulline + H+ + phosphate.","definition_xrefs":["EC:2.1.3.9","RHEA:18609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylornithine carbamoyltransferase activity","secondary_identifiers":["MetaCyc:2.1.3.9-RXN","KEGG_REACTION:R07245"],"synonyms":[{"name":"AOTC","type":"related"},{"name":"N-acetylornithine transcarbamylase activity","type":"exact"},{"name":"acetylornithine transcarbamylase activity","type":"exact"},{"name":"carbamoyl-phosphate:2-N-acetyl-L-ornithine carbamoyltransferase activity","type":"related"},{"name":"carbamoyl-phosphate:N2-acetyl-L-ornithine carbamoyltransferase activity","type":"related"}],"termid":"GO:0043857"}


id: PBO:0065993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 2","termid":"PBO:0065993"}


id: PBO:0016103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein, involved in protein localization to plasma membrane (predicted)","termid":"PBO:0016103"}


id: PR:P79015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3202 gene.","definition_xrefs":["UniProtKB:P79015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.10","synonyms":[{"name":"Spom972h-rpl3202","type":"exact"}],"termid":"PR:P79015"}


id: PBO:0044968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase X-linked","termid":"PBO:0044968"}


id: PBO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 3","termid":"PBO:0060734"}


id: GO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a copper-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"copper incorporation into copper-sulfur cluster","synonyms":[{"name":"copper incorporation into copper-sulphur cluster","type":"exact"}],"termid":"GO:0018428"}


id: FYPO:0007324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H4 in cell","synonyms":[{"name":"decreased accumulation of histone H4 in cell","type":"related"},{"name":"decreased cellular histone H4 level","type":"exact"},{"name":"decreased histone H4 level during vegetative growth","type":"exact"},{"name":"decreased level of histone H4 in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H4 in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H4 in cell","type":"exact"}],"termid":"FYPO:0007324"}


id: GO:0065007
data:
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id: PBO:0075927
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 19","termid":"PBO:0075927"}


id: GO:0102784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lutein + 2 O2 = 3-hydroxy-beta-ionone + 3-hydroxy-alpha-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["EC:1.13.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lutein oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7884"],"termid":"GO:0102784"}


id: PBO:0059857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase domain containing","termid":"PBO:0059857"}


id: PBO:0078641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component interacting RNase","termid":"PBO:0078641"}


id: GO:0008008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane attack complex protein beta2 chain (obsolete GO:0008008)","synonyms":[{"name":"membrane attack complex protein beta2 chain","type":"exact"}],"termid":"GO:0008008"}


id: SO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An immature_peptide_region is the extent of the peptide after it has been translated and before any processing occurs.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"immature_peptide_region","secondary_identifiers":["BS:00129"],"synonyms":[{"name":"immature peptide region","type":"exact"}],"termid":"SO:0001063"}


id: GO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of ubiquitin transferase activity.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-protein transferase activity","termid":"GO:0051438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquitin-protein transferase activity","synonyms":[{"name":"APC activation","type":"narrow"},{"name":"APC activator","type":"narrow"},{"name":"SCF complex activator","type":"narrow"},{"name":"activation of ubiquitin transferase activity","type":"narrow"},{"name":"anaphase promoting complex activator","type":"narrow"},{"name":"anaphase-promoting complex activator","type":"narrow"},{"name":"positive regulation of ubiquitin transferase activity","type":"exact"},{"name":"stimulation of ubiquitin transferase activity","type":"narrow"},{"name":"ubiquitin transferase activator","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity","type":"related"},{"name":"up-regulation of ubiquitin transferase activity","type":"exact"},{"name":"upregulation of ubiquitin transferase activity","type":"exact"}],"termid":"GO:0051443"}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: GO:0070861
data:
  {"annotated_genes":["SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"regulates","term_name":"protein exit from endoplasmic reticulum","termid":"GO:0032527"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein exit from ER","type":"exact"},{"name":"regulation of protein export from ER","type":"exact"},{"name":"regulation of protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0070861","terms_by_termid":{"GO:0070863":null}}


id: GO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + formaldehyde = glyceraldehyde 3-phosphate + glycerone.","definition_xrefs":["MetaCyc:FORMALDEHYDE-TRANSKETOLASE-RXN","EC:2.2.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0016744","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"formaldehyde transketolase activity","secondary_identifiers":["RHEA:24264"],"synonyms":[{"name":"D-xylulose-5-phosphate:formaldehyde glycolaldehydetransferase activity","type":"related"},{"name":"DHAS activity","type":"related"},{"name":"dihydroxyacetone synthase activity","type":"related"},{"name":"glycerone synthase activity","type":"related"}],"termid":"GO:0047896"}


id: PBO:0003638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR8 family","termid":"PBO:0003638"}


id: GO:0033084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immature T cell proliferation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"regulates","term_name":"immature T cell proliferation in thymus","termid":"GO:0033080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immature T cell proliferation in thymus","synonyms":[{"name":"regulation of thymic T cell proliferation","type":"exact"},{"name":"regulation of thymocyte cell proliferation","type":"exact"},{"name":"regulation of thymocyte proliferation","type":"exact"}],"termid":"GO:0033084"}


id: GO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostatic bud formation","termid":"GO:0060686"}


id: PBO:0080230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VKORC1 pseudogene 1","termid":"PBO:0080230"}


id: PBO:0038591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAD9 divergent transcript","termid":"PBO:0038591"}


id: GO:0036449
data:
  {"annotated_genes":["SJAG_01613","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95296,96452],"is_not":false,"summary":null,"term":"GO:0036449"}]},"cv_name":"cellular_component","definition":"The end of a microtubule that does not preferentially grow (polymerize).","definition_xrefs":["PMID:23169647","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule minus end","type":"exact"}],"termid":"GO:0036449","terms_by_termid":{"GO:0036449":null}}


id: GO:0106235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ceramide-1-phosphate + H2O = ceramide+ phosphate.","definition_xrefs":["GOC:lb","PMID:10359651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid phosphatase activity","termid":"GO:0042577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ceramide-1-phosphate phosphatase activity","secondary_identifiers":["RHEA:50888"],"termid":"GO:0106235"}


id: GO:0160007
data:
  {"annotated_genes":["SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109207],"is_not":false,"summary":null,"term":"GO:0160007"}]},"cv_name":"biological_process","definition":"The process in which glutathione is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:34707288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glutathione import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160007","terms_by_termid":{"GO:0160007":null}}


id: GO:2000257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"regulation of protein activation cascade","synonyms":[{"name":"regulation of protein activation pathway","type":"exact"},{"name":"regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000257"}


id: GO:2000587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010642"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"negative regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"negative regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"negative regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000587"}


id: PATO:0015005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Slender and spirally coiled.","direct_ancestors":[{"relation_name":"has_part","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"has_part","term_name":"slender","termid":"PATO:0002212"},{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendrilous","synonyms":[{"name":"tendril-like","type":"related"},{"name":"tendril-shaped","type":"related"},{"name":"tendrilled","type":"broad"}],"termid":"PATO:0015005"}


id: PBO:0069674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 951, pseudogene","termid":"PBO:0069674"}


id: GO:0039584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein kinase activity (obsolete GO:0039584)","termid":"GO:0039584"}


id: PBO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 22","termid":"PBO:0071181"}


id: PBO:0027703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proteasome_localization","termid":"PBO:0027703"}


id: PBO:0062007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 1","termid":"PBO:0062007"}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: PBO:0027918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myriocin_during_mating","termid":"PBO:0027918"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: PBO:0054889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2303","termid":"PBO:0054889"}


id: PBO:0051608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 32","termid":"PBO:0051608"}


id: PBO:0031030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolus_organization","termid":"PBO:0031030"}


id: GO:1990095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["PMID:16166371","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to reactive oxygen species (obsolete GO:1990095)","termid":"GO:1990095"}


id: SO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamine","secondary_identifiers":["MOD:00907"],"synonyms":[{"name":"ModGln","type":"exact"},{"name":"modified L glutamine","type":"exact"},{"name":"modified L-glutamine","type":"exact"}],"termid":"SO:0001394"}


id: GO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"vitamin K biosynthetic process","synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K anabolism","type":"exact"},{"name":"vitamin K biosynthesis","type":"exact"},{"name":"vitamin K formation","type":"exact"},{"name":"vitamin K synthesis","type":"exact"}],"termid":"GO:0042371"}


id: PBO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp3 (predicted)","termid":"PBO:0005140"}


id: PBO:0039917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 17","termid":"PBO:0039917"}


id: PBO:0075243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 13","termid":"PBO:0075243"}


id: PBO:0053028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAPTM4A divergent transcript","termid":"PBO:0053028"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: PBO:0065438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 11","termid":"PBO:0065438"}


id: GO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic chromosome (obsolete GO:0000229)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"narrow"}],"termid":"GO:0000229"}


id: GO:0008039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets signals produced by potential target cells, with which it may form synapses.","definition_xrefs":["GOC:mah","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron recognition","termid":"GO:0008038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic target recognition","synonyms":[{"name":"neuronal targeting","type":"exact"}],"termid":"GO:0008039"}


id: GO:0099581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099581"}


id: PBO:0051581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E","termid":"PBO:0051581"}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: PBO:0013083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 Sap14","termid":"PBO:0013083"}


id: PBO:0077688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF2 and NCK interacting kinase","termid":"PBO:0077688"}


id: GO:0060800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell differentiation that contributes to the progression of the placenta over time, from its initial condition to its mature state.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell differentiation involved in embryonic placenta development","termid":"GO:0060800"}


id: GO:0019749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances along cytoskeletal elements, such as microfilaments or microtubules, from a nurse cell to an oocyte.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton-dependent intracellular transport","termid":"GO:0030705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte","termid":"GO:0019749"}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: PBO:0018120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar SNARE Vsl1/Vam7","termid":"PBO:0018120"}


id: PBO:0056584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter regulator 1","termid":"PBO:0056584"}


id: PBO:0027770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination_frequency","termid":"PBO:0027770"}


id: PBO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP93 divergent transcript","termid":"PBO:0061679"}


id: PBO:0090338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc1/Ybt1","termid":"PBO:0090338"}


id: PBO:0057672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1263","termid":"PBO:0057672"}


id: PBO:0085333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes; converts phosphatidylserine to phosphatidylethanolamine; controls vacuolar membrane phospholipid content by regulating phospholipids in compartments that will eventually give rise to the vacuole; loss of Psd2p causes a specific reduction in vacuolar membrane PE levels while total PE levels are not significantly affected","termid":"PBO:0085333"}


id: PBO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member B","termid":"PBO:0047156"}


id: SO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that has been inserted into the bacterial genome using a bacterial artificial chromosome.","direct_ancestors":[{"relation_name":"derives_from","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"cloned_genomic_insert","termid":"SO:0000914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_cloned_genomic_insert","synonyms":[{"name":"BAC cloned genomic insert","type":"exact"}],"termid":"SO:0000992"}


id: GO:0062240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to euchromatin and the nuclear inner membrane, in order to establish and maintain the euchromatin location and organization.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin-nuclear membrane anchor activity","termid":"GO:0140707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"euchromatin-nuclear membrane anchor activity","synonyms":[{"name":"euchromatin-nuclear membrane tether activity","type":"exact"},{"name":"nuclear membrane-euchromatin anchor activity","type":"exact"},{"name":"nuclear membrane-euchromatin tether activity","type":"exact"}],"termid":"GO:0062240"}


id: PBO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1 (predicted)","termid":"PBO:0032758"}


id: GO:0033967
data:
  {"annotated_genes":["SJAG_02350","SJAG_01369","SJAG_00943","SJAG_02553","SJAG_04527","SJAG_06613","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106270,104163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[98250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[87200,100840,109560,111369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box C/D type small nucleolar RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_01369":null,"SJAG_02350":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_04527":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"box C/D sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"box C/D snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033967","terms_by_termid":{"GO:0000494":null,"GO:0034965":null,"GO:0106410":null}}


id: FYPO:0000845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein degradation during vegetative growth","synonyms":[{"name":"abnormal protein breakdown during vegetative growth","type":"exact"},{"name":"abnormal protein catabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein catabolism during vegetative growth","type":"exact"},{"name":"abnormal protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000845"}


id: PR:O74751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1734.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1734.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.10c","synonyms":[{"name":"Spom972h-SPBC1734.10c","type":"exact"}],"termid":"PR:O74751"}


id: PBO:0041198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog pseudogene 1","termid":"PBO:0041198"}


id: PBO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 4","termid":"PBO:0075229"}


id: PBO:0029682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_interphase_before_NETO","termid":"PBO:0029682"}


id: PBO:0089083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 8, hinge protein","termid":"PBO:0089083"}


id: GO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Strengthening of a bond between peptides. Peptides are compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide stabilization activity (obsolete GO:0048191)","synonyms":[{"name":"peptide stabilization activity","type":"exact"}],"termid":"GO:0048191"}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: FYPO:0001655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal histidine import","synonyms":[{"name":"abnormal L-histidine import","type":"exact"},{"name":"abnormal L-histidine import across plasma membrane","type":"exact"},{"name":"abnormal histidine import during mitotic cell cycle","type":"related"},{"name":"abnormal histidine import during vegetative growth","type":"exact"},{"name":"abnormal histidine import into cell","type":"exact"},{"name":"abnormal histidine uptake","type":"exact"}],"termid":"FYPO:0001655"}


id: GO:0030103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of vasopressin from secretory granules into the blood.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vasopressin secretion","termid":"GO:0030103"}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["GOC:TermGenie","PMID:22809626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: GO:0098843
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stably positioned site of clathrin adjacent and physically attached to the postsynaptic specialization, which is the site of endocytosis of post-synaptic proteins.","definition_xrefs":["PMID:17880892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic endocytic zone","termid":"GO:0098843"}


id: PBO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0000376"}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: GO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010746"}


id: PBO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_improper_part","termid":"PBO:0017409"}


id: PBO:0072910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 3","termid":"PBO:0072910"}


id: PBO:0028953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_recovery_from_stationary_phase","termid":"PBO:0028953"}


id: GO:0006251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dCDP catabolic process","synonyms":[{"name":"dCDP breakdown","type":"exact"},{"name":"dCDP catabolism","type":"exact"},{"name":"dCDP degradation","type":"exact"}],"termid":"GO:0006251"}


id: GO:0004883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a glucocorticoid and transmitting the signal within the cell trigger a change in cell activity or function.","definition_xrefs":["PMID:17689856","PMID:20920967","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear steroid receptor activity","termid":"GO:0003707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nuclear glucocorticoid receptor activity","synonyms":[{"name":"glucocorticoid receptor activity","type":"broad"}],"termid":"GO:0004883"}


id: PBO:0088099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uracil-DNA glycosylase; required for repair of uracil in DNA formed by spontaneous cytosine deamination; efficiently excises uracil from single-stranded DNA in vivo; not required for strand-specific mismatch repair; cell-cycle regulated, expressed in late G1; localizes to mitochondria and nucleus","termid":"PBO:0088099"}


id: GO:0035222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process giving rise to the pattern of cell differentiation in the wing imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc pattern formation","termid":"GO:0035222"}


id: PBO:0073140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B3, pseudogene","termid":"PBO:0073140"}


id: GO:0005342
data:
  {"annotated_genes":["SJAG_04984","SJAG_02029","SJAG_04637","SJAG_04706","SJAG_00671","SJAG_00275","SJAG_00232","SJAG_03503","SJAG_01960","SJAG_03256","SJAG_02780","SJAG_04718","SJAG_02140","SJAG_04295","SJAG_01505","SJAG_00276","SJAG_04905","SJAG_03400","SJAG_00543","SJAG_00522","SJAG_05325","SJAG_04593","SJAG_00626","SJAG_03899","SJAG_01406","SJAG_05175","SJAG_01872","SJAG_02779","SJAG_04588","SJAG_01924","SJAG_03644","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[92663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[88166,70804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[69891,83613,78689,78775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046943"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[109766,115031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[88167,70808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[103635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[88593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[94325,96321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[84568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[99926,96444,93464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98886,106096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[99927,92665,94326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[99928,93465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[106097,98887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[106098,98888,93466,96445,99929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[103977,94327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96436,97293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99930,86743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[97740,114484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[104358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[89437,108329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[90498,110228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[97743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[108335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic acids from one side of a membrane to the other. Organic acids are acidic compound containing carbon in covalent linkage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00275":null,"SJAG_00276":null,"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_01505":null,"SJAG_01872":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02029":null,"SJAG_02140":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03503":null,"SJAG_03644":null,"SJAG_03899":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04593":null,"SJAG_04637":null,"SJAG_04706":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04905":null,"SJAG_04984":null,"SJAG_05175":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"organic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005342","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0005371":null,"GO:0008517":null,"GO:0015123":null,"GO:0015128":null,"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0015225":null,"GO:0015233":null,"GO:0015366":null,"GO:0033229":null,"GO:0034639":null,"GO:0034658":null,"GO:0046943":null,"GO:0050833":null,"GO:0061459":null,"GO:0071913":null,"GO:0089721":null,"GO:0097434":null,"GO:1901239":null,"GO:1901604":null}}


id: PBO:0059433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A4A","termid":"PBO:0059433"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: FYPO:0007408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal at sites encoding polyadenylation signals.","definition_xrefs":["PMID:32499400","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at polyadenylation site","synonyms":[{"name":"abnormal protein localisation to chromatin at polyadenylation site","type":"exact"},{"name":"abnormal protein localization to chromatin at poly(A) site","type":"exact"},{"name":"abnormal protein localization to chromatin at polyadenylation site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at polyadenylation site during vegetative growth","type":"exact"}],"termid":"FYPO:0007408"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["MetaCyc:SUCUTIL-PWY","GOC:dgf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: PBO:0034587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_glycerophospholipids","termid":"PBO:0034587"}


id: GO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + maltose(out) = ADP + phosphate + maltose(in).","definition_xrefs":["RHEA:22132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"ABC-type oligosaccharide transporter activity","termid":"GO:0015422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type maltose transporter activity","secondary_identifiers":["MetaCyc:ABC-16-RXN","EC:7.5.2.1"],"synonyms":[{"name":"ABC-type maltose transporter","type":"exact"},{"name":"ATP-dependent maltose transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled maltose transmembrane transporter activity","type":"related"},{"name":"maltooligosaccharide-importing ATPase activity","type":"related"},{"name":"maltose ABC transporter","type":"exact"},{"name":"maltose-transporting ATPase activity","type":"related"}],"termid":"GO:0015423"}


id: PBO:0075670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 5","termid":"PBO:0075670"}


id: PBO:0069365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 625, pseudogene","termid":"PBO:0069365"}


id: PBO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 21","termid":"PBO:0071689"}


id: PBO:0047379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 10","termid":"PBO:0047379"}


id: PBO:0086969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p; small single-membrane span proteolipid; forms unique helix and positively charged cytoplasmic domain that is able to specifically segregate phosphatidylserines; PMP1 has a paralog, PMP2, that arose from the whole genome duplication","termid":"PBO:0086969"}


id: GO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response","termid":"GO:0002676"}


id: PBO:0087247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine kinase and DNA damage checkpoint effector; mediates cell cycle arrest via phosphorylation of Pds1p; phosphorylated by checkpoint signal transducer Mec1p; homolog of S. pombe and mammalian Chk1 checkpoint kinase","termid":"PBO:0087247"}


id: FYPO:0002639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is greater than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:22065639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"increased distance between mitotic kinetochores","type":"related"},{"name":"increased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"increased interkinetochore distance before anaphase onset","type":"exact"},{"name":"increased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"increased sister kinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0002639"}


id: GO:1903615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:11129957","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphoprotein phosphatase activity","termid":"GO:0032516"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine phosphatase activity","termid":"GO:1903613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein tyrosine phosphatase activity","synonyms":[{"name":"activation of PPT-phosphatase activity","type":"narrow"},{"name":"activation of PTP-phosphatase activity","type":"narrow"},{"name":"activation of PTPase activity","type":"narrow"},{"name":"activation of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"activation of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein tyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"activation of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"activation of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"positive regulation of PPT-phosphatase activity","type":"exact"},{"name":"positive regulation of PTP-phosphatase activity","type":"exact"},{"name":"positive regulation of PTPase activity","type":"exact"},{"name":"positive regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"positive regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"positive regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"positive regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of PPT-phosphatase activity","type":"exact"},{"name":"up regulation of PTP-phosphatase activity","type":"exact"},{"name":"up regulation of PTPase activity","type":"exact"},{"name":"up regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of PPT-phosphatase activity","type":"exact"},{"name":"up-regulation of PTP-phosphatase activity","type":"exact"},{"name":"up-regulation of PTPase activity","type":"exact"},{"name":"up-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of PPT-phosphatase activity","type":"exact"},{"name":"upregulation of PTP-phosphatase activity","type":"exact"},{"name":"upregulation of PTPase activity","type":"exact"},{"name":"upregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"upregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"upregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"upregulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903615"}


id: FYECO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which calcium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CaCl2","synonyms":[{"name":"+ calcium chloride","type":"exact"}],"termid":"FYECO:0000261"}


id: PBO:0028151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spliceosomal_complex_assembly","termid":"PBO:0028151"}


id: PBO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 11","termid":"PBO:0072212"}


id: PBO:0074871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 54","termid":"PBO:0074871"}


id: PBO:0063115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase 1 pseudogene 2","termid":"PBO:0063115"}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: PBO:0109816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER to Golgi ceramide transport protein, lipocalin superfamily Svf2","termid":"PBO:0109816"}


id: PBO:0070138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 52 pseudogene","termid":"PBO:0070138"}


id: PBO:0050355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 58","termid":"PBO:0050355"}


id: PBO:0072705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 1","termid":"PBO:0072705"}


id: GO:0106408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP = 3',3'-c-di-AMP + 2 diphosphate.","definition_xrefs":["RHEA:35655","PMID:30884174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diadenylate cyclase activity","secondary_identifiers":["MetaCyc:RXN-14338","EC:2.7.7.85"],"synonyms":[{"name":"cyclic-di-AMP synthase","type":"exact"}],"termid":"GO:0106408"}


id: MOD:00767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein amino group to form a Schiff-base or an Amadori ketosamine residue adduct.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycated residue","termid":"MOD:00767"}


id: PBO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_enzyme","termid":"PBO:0017431"}


id: PBO:0076300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin repeat containing nuclear envelope family member 4","termid":"PBO:0076300"}


id: PBO:0051536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4 receptor","termid":"PBO:0051536"}


id: PBO:0039356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidohydrolase domain containing 2","termid":"PBO:0039356"}


id: PBO:0109284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylitol dehydrogenase","termid":"PBO:0109284"}


id: GO:0010666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell apoptotic process","termid":"GO:0010663"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell apoptotic process","termid":"GO:0010665"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"positive regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010666"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: PBO:0035707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0035707"}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: GO:0046106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thymine biosynthetic process","synonyms":[{"name":"thymine anabolism","type":"exact"},{"name":"thymine biosynthesis","type":"exact"},{"name":"thymine formation","type":"exact"},{"name":"thymine synthesis","type":"exact"}],"termid":"GO:0046106"}


id: PBO:0052772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 64","termid":"PBO:0052772"}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: FYPO:0002502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein palmitoylation is normal (i.e. indistinguishable from wild type). Protein palmitoylation is the addition of a palmitoyl group to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0018345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"},{"relation_name":"is_a","term_name":"normal protein palmitoylation","termid":"FYPO:0002500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein palmitoylation during vegetative growth","synonyms":[{"name":"normal protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide palmitoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002502"}


id: PR:O74839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MscS family protein C1183.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.11","synonyms":[{"name":"Spom972h-msy1","type":"exact"}],"termid":"PR:O74839"}


id: PBO:0057255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 466","termid":"PBO:0057255"}


id: PBO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030235"}


id: FYPO:0003272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium hypochlorite.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on sodium hypochlorite","synonyms":[{"name":"normal cell population growth in presence of sodium hypochlorite","type":"exact"},{"name":"normal cell population growth on NaOCl","type":"exact"},{"name":"normal cell population growth on sodium hypochlorite","type":"exact"},{"name":"normal cellular response to sodium hypochlorite","type":"related"},{"name":"normal vegetative cell population growth on sodium hypochlorite","type":"exact"}],"termid":"FYPO:0003272"}


id: PBO:0055363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2792","termid":"PBO:0055363"}


id: PBO:0039548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 antisense RNA 1","termid":"PBO:0039548"}


id: PBO:0056938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-3","termid":"PBO:0056938"}


id: PBO:0076293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin binding cytoplasmic RNA interacting protein","termid":"PBO:0076293"}


id: PBO:0087926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally regulated by various stress responses; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087926"}


id: PBO:0027846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_multinucleate_vegetative_cell","termid":"PBO:0027846"}


id: PBO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 2","termid":"PBO:0044305"}


id: GO:1904154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde protein transport, ER to cytosol.","definition_xrefs":["PMID:18555783","GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein exit from endoplasmic reticulum","termid":"GO:0070863"},{"relation_name":"is_a","term_name":"regulation of retrograde protein transport, ER to cytosol","termid":"GO:1904152"},{"relation_name":"positively_regulates","term_name":"retrograde protein transport, ER to cytosol","termid":"GO:0030970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde protein transport, ER to cytosol","synonyms":[{"name":"activation of protein dislocation from ER","type":"narrow"},{"name":"activation of retrograde protein transport, ER to cytosol","type":"narrow"},{"name":"activation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"narrow"},{"name":"positive regulation of protein dislocation from ER","type":"exact"},{"name":"positive regulation of protein retrotranslocation from ER","type":"exact"},{"name":"positive regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up regulation of protein dislocation from ER","type":"exact"},{"name":"up regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"up-regulation of protein dislocation from ER","type":"exact"},{"name":"up-regulation of protein retrotranslocation from ER","type":"exact"},{"name":"up-regulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"up-regulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"},{"name":"upregulation of protein dislocation from ER","type":"exact"},{"name":"upregulation of retrograde protein transport, ER to cytosol","type":"exact"},{"name":"upregulation of retrograde protein transport, endoplasmic reticulum to cytosol","type":"exact"}],"termid":"GO:1904154"}


id: GO:0034838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-(2S,5R)-menthone + NAD+ = (5R)-menth-2-enone + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"menthone dehydrogenase activity","termid":"GO:0034838"}


id: GO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.","definition_xrefs":["PMID:11948193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140098","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"ribonuclease R activity","secondary_identifiers":["EC:3.1.11.-"],"termid":"GO:0008997"}


id: GO:1903203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oxidative stress-induced neuron death.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oxidative stress-induced neuron death (obsolete GO:1903203)","synonyms":[{"name":"regulation of neuron death in response to oxidative stress","type":"exact"},{"name":"regulation of neuronal cell death in response to oxidative stress","type":"exact"}],"termid":"GO:1903203"}


id: PBO:0049397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTSE1 divergent transcript","termid":"PBO:0049397"}


id: PBO:0087831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiamine-phosphate diphosphorylase and hydroxyethylthiazole kinase; required for thiamine biosynthesis; GFP-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0087831"}


id: PBO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S1PR1 divergent transcript","termid":"PBO:0072731"}


id: PBO:0005857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nsa2 (predicted)","termid":"PBO:0005857"}


id: GO:0070779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aspartate transmembrane transport","termid":"GO:0070777"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"D-aspartate import across plasma membrane","secondary_identifiers":["GO:0140016"],"synonyms":[{"name":"D-aspartate import","type":"broad"},{"name":"D-aspartate import into cell","type":"exact"},{"name":"D-aspartate uptake","type":"exact"}],"termid":"GO:0070779"}


id: PBO:0089238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex GCP6 subunit Alp16","termid":"PBO:0089238"}


id: PR:O59697
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32C12.03c","synonyms":[{"name":"Spom972h-ppk25","type":"exact"}],"termid":"PR:O59697"}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: FYPO:0006650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATP-dependent protein-DNA complex displacement activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ATP-dependent protein-DNA complex displacement activity","termid":"FYPO:0006650"}


id: GO:1900000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anthocyanin catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound catabolic process","termid":"GO:0046284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin catabolic process","synonyms":[{"name":"regulation of anthocyanin breakdown","type":"exact"},{"name":"regulation of anthocyanin catabolism","type":"exact"},{"name":"regulation of anthocyanin degradation","type":"exact"}],"termid":"GO:1900000"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115526],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: PBO:0054395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1791","termid":"PBO:0054395"}


id: GO:0007115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bud site selection/establishment of cell polarity (sensu Saccharomyces) (obsolete GO:0007115)","synonyms":[{"name":"bud site selection/establishment of cell polarity (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007115"}


id: PBO:0077085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 induced glycolysis regulatory phosphatase","termid":"PBO:0077085"}


id: GO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating noradrenaline","type":"exact"}],"termid":"GO:0003117"}


id: FYPO:0009055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethyl methanesulfonate","synonyms":[{"name":"resistance to ethyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to ethyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistant to ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009055"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PomBase:MAH","PMID:20929775","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: GO:0047521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha,7alpha,12beta-trihydroxy-5beta-cholanate + NADP+ = 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:21424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3alpha,7alpha,12beta-trihydroxy-5beta-cholanate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03495","EC:1.1.1.238","MetaCyc:12-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN"],"synonyms":[{"name":"12-beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12beta-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"}],"termid":"GO:0047521"}


id: PBO:0078712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-7","termid":"PBO:0078712"}


id: FYPO:0000173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the DNA replication checkpoint in a mitotic cell cycle is abnormal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle DNA replication checkpoint","secondary_identifiers":["FYPO:0000823"],"synonyms":[{"name":"abnormal DNA replication checkpoint","type":"broad"},{"name":"abnormal mitotic cell cycle DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0000173"}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PBO:0052415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains pseudogene 1","termid":"PBO:0052415"}


id: GO:1900039
data:
  {"annotated_genes":["SJAG_01585","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85396,112458],"is_not":false,"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"positively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cellular response to hypoxia","type":"related"},{"name":"activation of cellular response to hypoxic stress","type":"exact"},{"name":"activation of cellular response to lowered oxygen tension","type":"exact"},{"name":"positive regulation of cellular response to hypoxic stress","type":"exact"},{"name":"positive regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up regulation of cellular response to hypoxia","type":"related"},{"name":"up regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up-regulation of cellular response to hypoxia","type":"related"},{"name":"up-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"upregulation of cellular response to hypoxia","type":"related"},{"name":"upregulation of cellular response to hypoxic stress","type":"exact"},{"name":"upregulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900039","terms_by_termid":{"GO:1900039":null}}


id: PBO:0089099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 substrate adaptor, WD repeat protein, Raptor homolog Mip1","termid":"PBO:0089099"}


id: PBO:0088767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1","termid":"PBO:0088767"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


